HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-APR-06 2GPF TITLE SOLUTION NMR STRUCTURE OF PROTEIN PA22412 FROM PSEUDOMONAS AERUGINOSA. TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PAT86, ONTARIO CENTRE TITLE 3 FOR STRUCTURAL PROTEOMICS TARGET PA2412. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN PA2412; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA2412; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE3(GOLD); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: P11 KEYWDS BETA/ALPHA PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,J.A.LUKIN,A.YEE,C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (NESG) REVDAT 4 29-MAY-24 2GPF 1 REMARK REVDAT 3 09-MAR-22 2GPF 1 REMARK REVDAT 2 24-FEB-09 2GPF 1 VERSN REVDAT 1 02-JAN-07 2GPF 0 JRNL AUTH A.LEMAK,J.A.LUKIN,A.YEE,C.H.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF PA2412 PROTEIN DETERMINED USING ABACUS JRNL TITL 2 PROTOCOL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS 1.1 REMARK 3 AUTHORS : DELAGLIO, F. (NMRPIPE), BRUNGER, A.T. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1483 NOE-DERIVED DISTANCES CONSTRAINTS, REMARK 3 78 DIHEDRAL ANGLE RESTRAINTS, 40 RDC RESTRAINTS REMARK 4 REMARK 4 2GPF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037393. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 450 MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6MM PA2412, U-15N,13C, 450 MM REMARK 210 NACL, 10 MM MOPS, 1 MM REMARK 210 BENZAMIDINE, 10 MM DTT, 10 MM REMARK 210 ZNSO4, 0.01% NAN3, 95% H2O, 5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; J MODULATED REMARK 210 HSQC FOR RDC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.1, CNS 1.1 REMARK 210 METHOD USED : MOLECULAR DYNAMICS, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 5 114.93 65.92 REMARK 500 1 ARG A 7 53.81 -140.88 REMARK 500 1 ASP A 57 -37.80 -140.62 REMARK 500 1 ASP A 68 -72.58 -67.43 REMARK 500 1 LYS A 69 -77.08 -146.86 REMARK 500 1 ALA A 70 26.75 -149.28 REMARK 500 2 PHE A 5 89.53 179.75 REMARK 500 2 MET A 58 -48.12 -130.05 REMARK 500 3 ARG A 7 -58.40 -134.50 REMARK 500 3 THR A 56 48.42 175.16 REMARK 500 3 ASP A 57 -156.17 175.54 REMARK 500 3 MET A 58 -72.15 -122.66 REMARK 500 3 ARG A 59 172.53 64.14 REMARK 500 3 ALA A 70 -81.70 59.00 REMARK 500 4 PHE A 5 -70.10 61.89 REMARK 500 4 ILE A 10 137.01 -179.29 REMARK 500 4 HIS A 18 24.06 -69.68 REMARK 500 4 TRP A 55 18.70 -147.89 REMARK 500 4 MET A 58 -50.56 -127.62 REMARK 500 4 PRO A 60 -161.41 -79.90 REMARK 500 4 GLN A 65 101.09 65.81 REMARK 500 4 HIS A 66 -69.76 -91.82 REMARK 500 5 ASP A 8 -31.93 75.07 REMARK 500 5 ALA A 38 -139.65 -80.01 REMARK 500 5 TRP A 55 17.31 -150.70 REMARK 500 5 ALA A 70 -73.78 65.67 REMARK 500 5 ALA A 71 -55.31 -137.33 REMARK 500 6 SER A 3 83.08 58.08 REMARK 500 6 PHE A 5 -35.83 -159.02 REMARK 500 6 ARG A 7 93.89 -160.59 REMARK 500 6 ASP A 8 -64.39 -94.03 REMARK 500 6 PRO A 32 31.28 -72.41 REMARK 500 6 GLN A 33 -53.12 76.42 REMARK 500 6 THR A 56 84.08 67.99 REMARK 500 6 GLN A 65 130.16 70.05 REMARK 500 7 SER A 3 47.87 -78.95 REMARK 500 7 ASP A 9 -169.48 -113.33 REMARK 500 7 PRO A 60 43.84 -86.58 REMARK 500 7 GLN A 65 94.07 42.07 REMARK 500 7 MET A 67 -60.18 -104.88 REMARK 500 7 ASP A 68 142.08 71.43 REMARK 500 7 ALA A 70 -79.17 69.47 REMARK 500 8 SER A 3 -56.14 -129.19 REMARK 500 8 ARG A 7 -77.81 -90.80 REMARK 500 8 MET A 58 167.97 70.70 REMARK 500 8 ARG A 59 68.78 39.76 REMARK 500 8 GLN A 65 86.62 65.22 REMARK 500 8 MET A 67 38.54 -78.72 REMARK 500 8 LYS A 69 102.03 73.12 REMARK 500 9 PHE A 5 -7.31 75.28 REMARK 500 REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PAT86 RELATED DB: TARGETDB DBREF 2GPF A 1 72 GB 9948456 AAG05800 1 72 SEQRES 1 A 72 MET THR SER VAL PHE ASP ARG ASP ASP ILE GLN PHE GLN SEQRES 2 A 72 VAL VAL VAL ASN HIS GLU GLU GLN TYR SER ILE TRP PRO SEQRES 3 A 72 GLU TYR LYS GLU ILE PRO GLN GLY TRP ARG ALA ALA GLY SEQRES 4 A 72 LYS SER GLY LEU LYS LYS ASP CYS LEU ALA TYR ILE GLU SEQRES 5 A 72 GLU VAL TRP THR ASP MET ARG PRO LEU SER LEU ARG GLN SEQRES 6 A 72 HIS MET ASP LYS ALA ALA GLY HELIX 1 1 LEU A 43 VAL A 54 1 12 HELIX 2 2 PRO A 60 LEU A 63 5 4 HELIX 3 3 ARG A 64 LYS A 69 1 6 SHEET 1 A 3 TYR A 22 PRO A 26 0 SHEET 2 A 3 PHE A 12 ASN A 17 -1 N VAL A 15 O SER A 23 SHEET 3 A 3 TRP A 35 GLY A 42 -1 O GLY A 42 N PHE A 12 CISPEP 1 GLU A 53 VAL A 54 1 -5.43 CISPEP 2 GLU A 53 VAL A 54 2 -3.98 CISPEP 3 GLU A 53 VAL A 54 3 -2.32 CISPEP 4 GLU A 53 VAL A 54 4 -3.00 CISPEP 5 GLU A 53 VAL A 54 5 -3.24 CISPEP 6 GLU A 53 VAL A 54 6 -3.33 CISPEP 7 GLU A 53 VAL A 54 7 -4.35 CISPEP 8 GLU A 53 VAL A 54 8 -4.52 CISPEP 9 GLU A 53 VAL A 54 9 -2.29 CISPEP 10 GLU A 53 VAL A 54 10 -7.51 CISPEP 11 GLU A 53 VAL A 54 11 -1.43 CISPEP 12 GLU A 53 VAL A 54 12 -5.32 CISPEP 13 GLU A 53 VAL A 54 13 -3.95 CISPEP 14 GLU A 53 VAL A 54 14 -4.61 CISPEP 15 GLU A 53 VAL A 54 15 -2.25 CISPEP 16 GLU A 53 VAL A 54 16 -7.31 CISPEP 17 GLU A 53 VAL A 54 17 -2.57 CISPEP 18 GLU A 53 VAL A 54 18 -1.21 CISPEP 19 GLU A 53 VAL A 54 19 -2.90 CISPEP 20 GLU A 53 VAL A 54 20 -3.67 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1