HEADER TRANSFERASE 25-APR-06 2GS6 TITLE CRYSTAL STRUCTURE OF THE ACTIVE EGFR KINASE DOMAIN IN COMPLEX WITH AN TITLE 2 ATP ANALOG-PEPTIDE CONJUGATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 696-1022; COMPND 5 SYNONYM: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULORVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC-HT; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES KEYWDS EGFR, KINASE, ACTIVE, ATP-ANALOG PEPTIDE CONJUGATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHANG,J.GUREASKO,K.SHEN,P.A.COLE,J.KURIYAN REVDAT 5 30-AUG-23 2GS6 1 REMARK SEQADV LINK REVDAT 4 18-OCT-17 2GS6 1 REMARK REVDAT 3 24-FEB-09 2GS6 1 VERSN REVDAT 2 27-JUN-06 2GS6 1 JRNL REVDAT 1 20-JUN-06 2GS6 0 JRNL AUTH X.ZHANG,J.GUREASKO,K.SHEN,P.A.COLE,J.KURIYAN JRNL TITL AN ALLOSTERIC MECHANISM FOR ACTIVATION OF THE KINASE DOMAIN JRNL TITL 2 OF EPIDERMAL GROWTH FACTOR RECEPTOR JRNL REF CELL(CAMBRIDGE,MASS.) V. 125 1137 2006 JRNL REFN ISSN 0092-8674 JRNL PMID 16777603 JRNL DOI 10.1016/J.CELL.2006.05.013 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 14724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1486 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.436 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.513 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.044 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.135 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 41.33 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ATP_LINKER_PAR.TXT REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GS6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000037488. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : BOS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15419 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14700 REMARK 200 FOR THE DATA SET : 28.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.46000 REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1M14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG3350, 0.2 M LICITRATE, 4% REMARK 280 POLYPROPROPYLENE GLYCOL, 100 MM HEPES, PH 7.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 72.09100 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 72.09100 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.09100 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 72.09100 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.09100 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 72.09100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS AN ASYMMETRIC DIMER THAT IS REMARK 300 GENERATED BY A 3(2) FOLD OPERATION OF THE MONOMER IN THE ASYMMETRIC REMARK 300 UNIT: -Z+3/2,X-1/2,-Y+1/2 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 216.27300 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -72.09100 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 72.09100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 724 REMARK 465 GLU A 725 REMARK 465 ALA A 726 REMARK 465 PRO A 968 REMARK 465 THR A 969 REMARK 465 ASP A 970 REMARK 465 SER A 971 REMARK 465 ASN A 972 REMARK 465 PHE A 973 REMARK 465 TYR A 974 REMARK 465 ARG A 975 REMARK 465 ALA A 976 REMARK 465 LEU A 977 REMARK 465 MET A 978 REMARK 465 ASP A 979 REMARK 465 GLU A 980 REMARK 465 GLN A 996 REMARK 465 GLN A 997 REMARK 465 GLY A 998 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 GLU B 3 REMARK 465 PHE B 9 REMARK 465 GLU B 10 REMARK 465 ALA B 11 REMARK 465 LYS B 12 REMARK 465 LYS B 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 699 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 962 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 677 32.23 -93.86 REMARK 500 LYS A 689 56.76 -143.59 REMARK 500 LYS A 690 84.66 -30.06 REMARK 500 ALA A 698 62.03 -104.20 REMARK 500 PHE A 699 -4.80 179.21 REMARK 500 GLU A 712 135.57 -32.34 REMARK 500 GLU A 722 30.03 -99.80 REMARK 500 SER A 760 -57.02 -7.83 REMARK 500 ASP A 783 15.98 -69.15 REMARK 500 ASP A 813 36.31 -149.95 REMARK 500 ASP A 831 83.42 53.49 REMARK 500 PRO A 853 93.43 -66.85 REMARK 500 ASP A 950 60.91 -154.41 REMARK 500 GLN A 952 -9.34 -59.48 REMARK 500 PRO A 966 -161.55 -52.74 REMARK 500 MET A 983 105.29 -50.20 REMARK 500 ASP A 984 -68.62 -160.13 REMARK 500 ILE B 5 115.09 56.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 112 B 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GS2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ACTIVE EGFR KINASE DOMAIN REMARK 900 RELATED ID: 2GS7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE INACTIVE EGFR KINASE DOMAIN IN COMPLEX REMARK 900 WITH AMP-PNP DBREF 2GS6 A 672 998 UNP Q9H2C9 EGFR_HUMAN 696 1022 DBREF 2GS6 B 1 13 PDB 2GS6 2GS6 1 13 SEQADV 2GS6 GLY A 669 UNP Q9H2C9 CLONING ARTIFACT SEQADV 2GS6 ALA A 670 UNP Q9H2C9 CLONING ARTIFACT SEQADV 2GS6 MET A 671 UNP Q9H2C9 CLONING ARTIFACT SEQRES 1 A 330 GLY ALA MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG SEQRES 2 A 330 ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU SEQRES 3 A 330 GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP SEQRES 4 A 330 ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE SEQRES 5 A 330 LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS SEQRES 6 A 330 GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP SEQRES 7 A 330 ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SEQRES 8 A 330 SER THR VAL GLN LEU ILE THR GLN LEU MET PRO PHE GLY SEQRES 9 A 330 CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE SEQRES 10 A 330 GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA SEQRES 11 A 330 LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS SEQRES 12 A 330 ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO SEQRES 13 A 330 GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU SEQRES 14 A 330 LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY SEQRES 15 A 330 LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU SEQRES 16 A 330 HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 17 A 330 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS SEQRES 18 A 330 PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE SEQRES 19 A 330 LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS SEQRES 20 A 330 THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET SEQRES 21 A 330 ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE SEQRES 22 A 330 ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR SEQRES 23 A 330 LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER SEQRES 24 A 330 PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU SEQRES 25 A 330 GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU SEQRES 26 A 330 ILE PRO GLN GLN GLY SEQRES 1 B 13 ALA GLU GLU GLU ILE TYR GLY GLU PHE GLU ALA LYS LYS HET CL A 201 1 HET 112 B 101 35 HETNAM CL CHLORIDE ION HETNAM 112 THIOPHOSPHORIC ACID O-((ADENOSYL-PHOSPHO)PHOSPHO)-S- HETNAM 2 112 ACETAMIDYL-DIESTER FORMUL 3 CL CL 1- FORMUL 4 112 C12 H19 N6 O13 P3 S FORMUL 5 HOH *74(H2 O) HELIX 1 1 LYS A 684 PHE A 688 5 5 HELIX 2 2 SER A 728 SER A 744 1 17 HELIX 3 3 CYS A 773 HIS A 781 1 9 HELIX 4 4 LYS A 782 ILE A 785 5 4 HELIX 5 5 GLY A 786 ARG A 807 1 22 HELIX 6 6 ALA A 815 ARG A 817 5 3 HELIX 7 7 PRO A 853 MET A 857 5 5 HELIX 8 8 ALA A 858 ARG A 865 1 8 HELIX 9 9 THR A 868 THR A 885 1 18 HELIX 10 10 PRO A 895 LYS A 905 1 11 HELIX 11 11 THR A 916 TRP A 927 1 12 HELIX 12 12 ASP A 930 ARG A 934 5 5 HELIX 13 13 LYS A 936 ARG A 949 1 14 HELIX 14 14 ASP A 950 TYR A 954 5 5 HELIX 15 15 GLY A 959 MET A 963 5 5 HELIX 16 16 ASP A 988 TYR A 992 5 5 SHEET 1 A 5 LYS A 692 SER A 696 0 SHEET 2 A 5 THR A 701 TRP A 707 -1 O VAL A 702 N LEU A 694 SHEET 3 A 5 ILE A 716 LYS A 721 -1 O VAL A 718 N GLY A 705 SHEET 4 A 5 GLN A 763 GLN A 767 -1 O THR A 766 N ALA A 719 SHEET 5 A 5 LEU A 753 CYS A 757 -1 N LEU A 754 O ILE A 765 SHEET 1 B 2 LEU A 809 VAL A 810 0 SHEET 2 B 2 LYS A 836 LEU A 837 -1 O LYS A 836 N VAL A 810 SHEET 1 C 2 VAL A 819 THR A 823 0 SHEET 2 C 2 HIS A 826 ILE A 829 -1 O LYS A 828 N LEU A 820 SHEET 1 D 2 TYR A 845 HIS A 846 0 SHEET 2 D 2 ILE A 866 TYR A 867 -1 O TYR A 867 N TYR A 845 LINK CZ TYR B 6 NS 112 B 101 1555 1555 1.45 SITE 1 AC1 1 ARG A 812 SITE 1 AC2 13 LEU A 694 ALA A 698 PHE A 699 ALA A 719 SITE 2 AC2 13 LYS A 721 THR A 766 GLN A 767 MET A 769 SITE 3 AC2 13 CYS A 773 ARG A 817 LEU A 820 ASP A 831 SITE 4 AC2 13 TYR B 6 CRYST1 144.182 144.182 144.182 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006936 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006936 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006936 0.00000