HEADER    HYDROLASE                               27-APR-06   2GT2              
TITLE     STRUCTURE OF THE E. COLI GDP-MANNOSE MANNOSYL HYDROLASE               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: GDP-MANNOSE MANNOSYL HYDROLASE;                            
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 SYNONYM: GDPMH, COLANIC ACID BIOSYNTHESIS PROTEIN WCAH;              
COMPND   5 EC: 3.6.1.-;                                                         
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                               
SOURCE   3 ORGANISM_TAXID: 562;                                                 
SOURCE   4 GENE: NUDD, GMM, WCAH;                                               
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET11B                                    
KEYWDS    GDP-MANNOSE HYDROLASE GDP-GLUCOSE HYDROLASE NUDIX, HYDROLASE          
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    S.B.GABELLI,M.A.BIANCHET,H.F.AZURMENDI,A.S.MILDVAN,L.M.AMZEL          
REVDAT   4   30-AUG-23 2GT2    1       SEQADV                                   
REVDAT   3   18-OCT-17 2GT2    1       REMARK                                   
REVDAT   2   24-FEB-09 2GT2    1       VERSN                                    
REVDAT   1   12-DEC-06 2GT2    0                                                
JRNL        AUTH   S.B.GABELLI,H.F.AZURMENDI,M.A.BIANCHET,L.M.AMZEL,A.S.MILDVAN 
JRNL        TITL   X-RAY, NMR, AND MUTATIONAL STUDIES OF THE CATALYTIC CYCLE OF 
JRNL        TITL 2 THE GDP-MANNOSE MANNOSYL HYDROLASE REACTION.                 
JRNL        REF    BIOCHEMISTRY                  V.  45 11290 2006              
JRNL        REFN                   ISSN 0006-2960                               
JRNL        PMID   16981689                                                     
JRNL        DOI    10.1021/BI061239G                                            
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  TITL   STRUCTURE AND MECHANISM OF GDP-MANNOSE GLYCOSYL HYDROLASE, A 
REMARK   1  TITL 2 NUDIX ENZYME THAT CLEAVES AT CARBON INSTEAD OF PHOSPHORUS.   
REMARK   1  REF    STRUCTURE                     V.   6   927 2004              
REMARK   1  REFN                   ISSN 0969-2126                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC                                               
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 223.61                         
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 92.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 34871                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.204                           
REMARK   3   R VALUE            (WORKING SET) : 0.201                           
REMARK   3   FREE R VALUE                     : 0.257                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1747                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.05                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1592                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 59.86                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2310                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 87                           
REMARK   3   BIN FREE R VALUE                    : 0.3280                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4937                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 0                                       
REMARK   3   SOLVENT ATOMS            : 351                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 32.48                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.35000                                             
REMARK   3    B22 (A**2) : -0.35000                                             
REMARK   3    B33 (A**2) : 0.53000                                              
REMARK   3    B12 (A**2) : -0.18000                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.280         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.215         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.147         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.166         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.943                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.904                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  5060 ; 0.007 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  6858 ; 1.058 ; 1.941       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   600 ; 5.499 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   272 ;33.287 ;22.574       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   791 ;15.630 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    52 ;15.664 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   734 ; 0.066 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3966 ; 0.003 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  2148 ; 0.181 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  3374 ; 0.302 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   380 ; 0.129 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    97 ; 0.183 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    30 ; 0.157 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  3070 ; 0.598 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  4815 ; 1.060 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  2268 ; 1.169 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  2043 ; 1.779 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 2GT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-06.                  
REMARK 100 THE DEPOSITION ID IS D_1000037514.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-OCT-04                          
REMARK 200  TEMPERATURE           (KELVIN) : 200                                
REMARK 200  PH                             : 0.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 210                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO, MADNESS                     
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 34871                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 223.610                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 92.3                               
REMARK 200  DATA REDUNDANCY                : 4.100                              
REMARK 200  R MERGE                    (I) : 0.07000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 19.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.07                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 63.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.80                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.20600                            
REMARK 200  R SYM FOR SHELL            (I) : 0.20600                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.030                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 1RYA                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 37.17                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M POTASSIUM SODIUM TARTRATE TETRA     
REMARK 280  -HYDRATE, PH 0.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      140.15333            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       70.07667            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER (A,B) OR (C,D)            
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 14580 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 2740 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 14580 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     MET A     2                                                      
REMARK 465     LEU A   119                                                      
REMARK 465     PRO A   120                                                      
REMARK 465     ASP A   121                                                      
REMARK 465     GLU A   122                                                      
REMARK 465     GLN A   123                                                      
REMARK 465     HIS A   124                                                      
REMARK 465     ASP A   125                                                      
REMARK 465     MET B     1                                                      
REMARK 465     MET B     2                                                      
REMARK 465     PHE B     3                                                      
REMARK 465     LEU B     4                                                      
REMARK 465     PRO B   120                                                      
REMARK 465     ASP B   121                                                      
REMARK 465     GLU B   122                                                      
REMARK 465     GLN B   123                                                      
REMARK 465     HIS B   124                                                      
REMARK 465     ASP B   125                                                      
REMARK 465     MET C     1                                                      
REMARK 465     GLU C   122                                                      
REMARK 465     GLN C   123                                                      
REMARK 465     HIS C   124                                                      
REMARK 465     ASP C   125                                                      
REMARK 465     MET D     1                                                      
REMARK 465     MET D     2                                                      
REMARK 465     PHE D     3                                                      
REMARK 465     PRO D   120                                                      
REMARK 465     ASP D   121                                                      
REMARK 465     GLU D   122                                                      
REMARK 465     GLN D   123                                                      
REMARK 465     HIS D   124                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A  94      -34.34    -39.97                                   
REMARK 500    GLU B 116       43.85    -90.80                                   
REMARK 500    GLU D 116       45.43    -88.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1RYA   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE E. COLI GDP-MANNOSE MANNOSYL HYDROLASE IN   
REMARK 900 COMPLEX WITH GDP AND MG                                              
REMARK 900 RELATED ID: 2GT4   RELATED DB: PDB                                   
DBREF  2GT2 A    2   160  UNP    P32056   NUDD_ECOLI       1    159             
DBREF  2GT2 B    2   160  UNP    P32056   NUDD_ECOLI       1    159             
DBREF  2GT2 C    2   160  UNP    P32056   NUDD_ECOLI       1    159             
DBREF  2GT2 D    2   160  UNP    P32056   NUDD_ECOLI       1    159             
SEQADV 2GT2 MET A    1  UNP  P32056              INITIATING METHIONINE          
SEQADV 2GT2 MET B    1  UNP  P32056              INITIATING METHIONINE          
SEQADV 2GT2 MET C    1  UNP  P32056              INITIATING METHIONINE          
SEQADV 2GT2 MET D    1  UNP  P32056              INITIATING METHIONINE          
SEQRES   1 A  160  MET MET PHE LEU ARG GLN GLU ASP PHE ALA THR VAL VAL          
SEQRES   2 A  160  ARG SER THR PRO LEU VAL SER LEU ASP PHE ILE VAL GLU          
SEQRES   3 A  160  ASN SER ARG GLY GLU PHE LEU LEU GLY LYS ARG THR ASN          
SEQRES   4 A  160  ARG PRO ALA GLN GLY TYR TRP PHE VAL PRO GLY GLY ARG          
SEQRES   5 A  160  VAL GLN LYS ASP GLU THR LEU GLU ALA ALA PHE GLU ARG          
SEQRES   6 A  160  LEU THR MET ALA GLU LEU GLY LEU ARG LEU PRO ILE THR          
SEQRES   7 A  160  ALA GLY GLN PHE TYR GLY VAL TRP GLN HIS PHE TYR ASP          
SEQRES   8 A  160  ASP ASN PHE SER GLY THR ASP PHE THR THR HIS TYR VAL          
SEQRES   9 A  160  VAL LEU GLY PHE ARG PHE ARG VAL SER GLU GLU GLU LEU          
SEQRES  10 A  160  LEU LEU PRO ASP GLU GLN HIS ASP ASP TYR ARG TRP LEU          
SEQRES  11 A  160  THR SER ASP ALA LEU LEU ALA SER ASP ASN VAL HIS ALA          
SEQRES  12 A  160  ASN SER ARG ALA TYR PHE LEU ALA GLU LYS ARG THR GLY          
SEQRES  13 A  160  VAL PRO GLY LEU                                              
SEQRES   1 B  160  MET MET PHE LEU ARG GLN GLU ASP PHE ALA THR VAL VAL          
SEQRES   2 B  160  ARG SER THR PRO LEU VAL SER LEU ASP PHE ILE VAL GLU          
SEQRES   3 B  160  ASN SER ARG GLY GLU PHE LEU LEU GLY LYS ARG THR ASN          
SEQRES   4 B  160  ARG PRO ALA GLN GLY TYR TRP PHE VAL PRO GLY GLY ARG          
SEQRES   5 B  160  VAL GLN LYS ASP GLU THR LEU GLU ALA ALA PHE GLU ARG          
SEQRES   6 B  160  LEU THR MET ALA GLU LEU GLY LEU ARG LEU PRO ILE THR          
SEQRES   7 B  160  ALA GLY GLN PHE TYR GLY VAL TRP GLN HIS PHE TYR ASP          
SEQRES   8 B  160  ASP ASN PHE SER GLY THR ASP PHE THR THR HIS TYR VAL          
SEQRES   9 B  160  VAL LEU GLY PHE ARG PHE ARG VAL SER GLU GLU GLU LEU          
SEQRES  10 B  160  LEU LEU PRO ASP GLU GLN HIS ASP ASP TYR ARG TRP LEU          
SEQRES  11 B  160  THR SER ASP ALA LEU LEU ALA SER ASP ASN VAL HIS ALA          
SEQRES  12 B  160  ASN SER ARG ALA TYR PHE LEU ALA GLU LYS ARG THR GLY          
SEQRES  13 B  160  VAL PRO GLY LEU                                              
SEQRES   1 C  160  MET MET PHE LEU ARG GLN GLU ASP PHE ALA THR VAL VAL          
SEQRES   2 C  160  ARG SER THR PRO LEU VAL SER LEU ASP PHE ILE VAL GLU          
SEQRES   3 C  160  ASN SER ARG GLY GLU PHE LEU LEU GLY LYS ARG THR ASN          
SEQRES   4 C  160  ARG PRO ALA GLN GLY TYR TRP PHE VAL PRO GLY GLY ARG          
SEQRES   5 C  160  VAL GLN LYS ASP GLU THR LEU GLU ALA ALA PHE GLU ARG          
SEQRES   6 C  160  LEU THR MET ALA GLU LEU GLY LEU ARG LEU PRO ILE THR          
SEQRES   7 C  160  ALA GLY GLN PHE TYR GLY VAL TRP GLN HIS PHE TYR ASP          
SEQRES   8 C  160  ASP ASN PHE SER GLY THR ASP PHE THR THR HIS TYR VAL          
SEQRES   9 C  160  VAL LEU GLY PHE ARG PHE ARG VAL SER GLU GLU GLU LEU          
SEQRES  10 C  160  LEU LEU PRO ASP GLU GLN HIS ASP ASP TYR ARG TRP LEU          
SEQRES  11 C  160  THR SER ASP ALA LEU LEU ALA SER ASP ASN VAL HIS ALA          
SEQRES  12 C  160  ASN SER ARG ALA TYR PHE LEU ALA GLU LYS ARG THR GLY          
SEQRES  13 C  160  VAL PRO GLY LEU                                              
SEQRES   1 D  160  MET MET PHE LEU ARG GLN GLU ASP PHE ALA THR VAL VAL          
SEQRES   2 D  160  ARG SER THR PRO LEU VAL SER LEU ASP PHE ILE VAL GLU          
SEQRES   3 D  160  ASN SER ARG GLY GLU PHE LEU LEU GLY LYS ARG THR ASN          
SEQRES   4 D  160  ARG PRO ALA GLN GLY TYR TRP PHE VAL PRO GLY GLY ARG          
SEQRES   5 D  160  VAL GLN LYS ASP GLU THR LEU GLU ALA ALA PHE GLU ARG          
SEQRES   6 D  160  LEU THR MET ALA GLU LEU GLY LEU ARG LEU PRO ILE THR          
SEQRES   7 D  160  ALA GLY GLN PHE TYR GLY VAL TRP GLN HIS PHE TYR ASP          
SEQRES   8 D  160  ASP ASN PHE SER GLY THR ASP PHE THR THR HIS TYR VAL          
SEQRES   9 D  160  VAL LEU GLY PHE ARG PHE ARG VAL SER GLU GLU GLU LEU          
SEQRES  10 D  160  LEU LEU PRO ASP GLU GLN HIS ASP ASP TYR ARG TRP LEU          
SEQRES  11 D  160  THR SER ASP ALA LEU LEU ALA SER ASP ASN VAL HIS ALA          
SEQRES  12 D  160  ASN SER ARG ALA TYR PHE LEU ALA GLU LYS ARG THR GLY          
SEQRES  13 D  160  VAL PRO GLY LEU                                              
FORMUL   5  HOH   *351(H2 O)                                                    
HELIX    1   1 ARG A    5  THR A   16  1                                  12    
HELIX    2   2 THR A   58  GLY A   72  1                                  15    
HELIX    3   3 PRO A   76  GLY A   80  5                                   5    
HELIX    4   4 SER A  113  LEU A  117  5                                   5    
HELIX    5   5 THR A  131  SER A  138  1                                   8    
HELIX    6   6 HIS A  142  ALA A  147  1                                   6    
HELIX    7   7 LEU A  150  THR A  155  1                                   6    
HELIX    8   8 ARG B    5  THR B   16  1                                  12    
HELIX    9   9 THR B   58  GLY B   72  1                                  15    
HELIX   10  10 PRO B   76  GLY B   80  5                                   5    
HELIX   11  11 SER B  113  LEU B  117  5                                   5    
HELIX   12  12 SER B  132  SER B  138  1                                   7    
HELIX   13  13 HIS B  142  ALA B  147  1                                   6    
HELIX   14  14 LEU B  150  THR B  155  1                                   6    
HELIX   15  15 ARG C    5  THR C   16  1                                  12    
HELIX   16  16 THR C   58  GLY C   72  1                                  15    
HELIX   17  17 PRO C   76  GLY C   80  5                                   5    
HELIX   18  18 SER C  113  LEU C  117  5                                   5    
HELIX   19  19 THR C  131  SER C  138  1                                   8    
HELIX   20  20 HIS C  142  ALA C  147  1                                   6    
HELIX   21  21 LEU C  150  THR C  155  1                                   6    
HELIX   22  22 ARG D    5  THR D   16  1                                  12    
HELIX   23  23 THR D   58  GLY D   72  1                                  15    
HELIX   24  24 PRO D   76  GLY D   80  5                                   5    
HELIX   25  25 SER D  113  LEU D  117  5                                   5    
HELIX   26  26 SER D  132  SER D  138  1                                   7    
HELIX   27  27 HIS D  142  ALA D  147  1                                   6    
HELIX   28  28 LEU D  150  THR D  155  1                                   6    
SHEET    1   A 4 GLY A  50  ARG A  52  0                                        
SHEET    2   A 4 LEU A  18  GLU A  26 -1  N  LEU A  21   O  GLY A  51           
SHEET    3   A 4 THR A 101  ARG A 111  1  O  HIS A 102   N  LEU A  18           
SHEET    4   A 4 GLN A  81  TYR A  90 -1  N  TYR A  90   O  THR A 101           
SHEET    1   B 3 TRP A  46  PHE A  47  0                                        
SHEET    2   B 3 PHE A  32  LYS A  36 -1  N  GLY A  35   O  PHE A  47           
SHEET    3   B 3 TYR A 127  LEU A 130 -1  O  LEU A 130   N  PHE A  32           
SHEET    1   C 4 GLY B  50  ARG B  52  0                                        
SHEET    2   C 4 LEU B  18  GLU B  26 -1  N  LEU B  21   O  GLY B  51           
SHEET    3   C 4 THR B 101  ARG B 111  1  O  PHE B 108   N  ILE B  24           
SHEET    4   C 4 GLN B  81  TYR B  90 -1  N  TRP B  86   O  VAL B 105           
SHEET    1   D 3 TRP B  46  PHE B  47  0                                        
SHEET    2   D 3 GLU B  31  LYS B  36 -1  N  GLY B  35   O  PHE B  47           
SHEET    3   D 3 TYR B 127  THR B 131 -1  O  LEU B 130   N  PHE B  32           
SHEET    1   E 4 GLY C  50  ARG C  52  0                                        
SHEET    2   E 4 LEU C  18  GLU C  26 -1  N  LEU C  21   O  GLY C  51           
SHEET    3   E 4 THR C 101  ARG C 111  1  O  HIS C 102   N  LEU C  18           
SHEET    4   E 4 GLN C  81  TYR C  90 -1  N  TRP C  86   O  VAL C 105           
SHEET    1   F 3 TRP C  46  PHE C  47  0                                        
SHEET    2   F 3 PHE C  32  LYS C  36 -1  N  GLY C  35   O  PHE C  47           
SHEET    3   F 3 TYR C 127  LEU C 130 -1  O  LEU C 130   N  PHE C  32           
SHEET    1   G 4 GLY D  50  ARG D  52  0                                        
SHEET    2   G 4 LEU D  18  GLU D  26 -1  N  LEU D  21   O  GLY D  51           
SHEET    3   G 4 THR D 101  ARG D 111  1  O  PHE D 108   N  ILE D  24           
SHEET    4   G 4 GLN D  81  TYR D  90 -1  N  HIS D  88   O  TYR D 103           
SHEET    1   H 3 TRP D  46  PHE D  47  0                                        
SHEET    2   H 3 GLU D  31  LYS D  36 -1  N  GLY D  35   O  PHE D  47           
SHEET    3   H 3 TYR D 127  THR D 131 -1  O  LEU D 130   N  PHE D  32           
CISPEP   1 ARG A   40    PRO A   41          0        -1.30                     
CISPEP   2 ARG B   40    PRO B   41          0        -4.50                     
CISPEP   3 ARG C   40    PRO C   41          0        -0.58                     
CISPEP   4 ARG D   40    PRO D   41          0        -4.05                     
CRYST1   48.767   48.767  210.230  90.00  90.00 120.00 P 32         12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.020510  0.011840  0.000000        0.00000                         
SCALE2      0.000000  0.023680  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.004760        0.00000