HEADER OXIDOREDUCTASE 27-APR-06 2GT3 TITLE SOLUTION STRUCTURE AND DYNAMICS OF THE REDUCED FORM OF METHIONINE TITLE 2 SULFOXIDE REDUCTASE A FROM ESCHERICHIA COLI, A 23 KDA PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE SULFOXIDE REDUCTASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: REDUCTASE; COMPND 5 EC: 1.8.4.6 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS L-METHIONINE SULFOXIDE, MET-(S)-SO, L-METHIONINE-(S)-SULFOXIDE, MET- KEYWDS 2 (R)-SO, L-METHIONINE-(R)-SULFOXIDE, MSR, METHIONINE SULFOXIDE KEYWDS 3 REDUCTASE, NUCLEAR MAGNETIC RESONANCE; HSQC, HETERONUCLEAR SINGLE KEYWDS 4 QUANTUM COHERENCE, NOE, NUCLEAR OVERHAUSER EFFECT, NOESY, NOE KEYWDS 5 SPECTROSCOPY, RDC, RESIDUAL DIPOLAR COUPLING, RMS, ROOT MEAN SQUARE, KEYWDS 6 RMSD, RMS DEVIATION, ROS, REACTIVE OXYGEN SPECIES., OXIDOREDUCTASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.COUDEVYLLE,M.T.CUNG REVDAT 4 29-MAY-24 2GT3 1 REMARK REVDAT 3 09-MAR-22 2GT3 1 REMARK SEQADV REVDAT 2 24-FEB-09 2GT3 1 VERSN REVDAT 1 27-FEB-07 2GT3 0 JRNL AUTH N.COUDEVYLLE,M.ANTOINE,S.BOUGUET-BONNET,P.MUTZENHARDT, JRNL AUTH 2 S.BOSCHI-MULLER,G.BRANLANT,M.T.CUNG JRNL TITL SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF THE REDUCED FORM JRNL TITL 2 AND AN OXIDIZED FORM OF E. COLI METHIONINE SULFOXIDE JRNL TITL 3 REDUCTASE A (MSRA): STRUCTURAL INSIGHT OF THE MSRA CATALYTIC JRNL TITL 4 CYCLE. JRNL REF J.MOL.BIOL. V. 366 193 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17157315 JRNL DOI 10.1016/J.JMB.2006.11.042 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 2 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GT3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000037515. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.1 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM MSRA, 1MM DTT, 50 MM KPI, REMARK 210 PH 7.1, 90 % H2O, 10 % D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DYANA 2 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 73 H ALA A 93 1.55 REMARK 500 O ALA A 70 H ALA A 182 1.57 REMARK 500 H SER A 106 OE1 GLN A 109 1.57 REMARK 500 O ALA A 45 H ILE A 98 1.59 REMARK 500 H TYR A 66 O VAL A 99 1.59 REMARK 500 O GLY A 54 H LEU A 58 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 104 -65.01 -101.98 REMARK 500 1 MET A 124 44.13 -87.02 REMARK 500 1 LEU A 207 153.29 -48.95 REMARK 500 2 HIS A 7 98.13 -60.26 REMARK 500 2 MET A 49 39.24 -141.60 REMARK 500 2 CYS A 51 109.99 -44.68 REMARK 500 2 ASN A 79 61.83 39.96 REMARK 500 2 PRO A 120 24.44 -74.97 REMARK 500 2 GLU A 183 158.44 -46.57 REMARK 500 2 ILE A 203 -62.74 -120.18 REMARK 500 2 CYS A 206 -59.75 -120.29 REMARK 500 3 LYS A 5 30.05 -87.19 REMARK 500 3 CYS A 51 109.65 -43.53 REMARK 500 3 MET A 124 59.21 -69.27 REMARK 500 3 TYR A 134 44.51 -108.35 REMARK 500 3 ASP A 164 8.20 81.47 REMARK 500 4 ASP A 4 58.71 -140.05 REMARK 500 4 LYS A 5 30.02 -87.23 REMARK 500 4 HIS A 7 105.95 -59.96 REMARK 500 4 CYS A 51 109.83 -41.89 REMARK 500 4 ASN A 117 -47.81 -130.55 REMARK 500 4 MET A 124 62.39 -68.70 REMARK 500 4 ARG A 125 157.82 179.91 REMARK 500 4 ASP A 164 30.45 71.02 REMARK 500 5 ALA A 14 159.32 -49.28 REMARK 500 5 LEU A 15 105.69 -49.49 REMARK 500 5 ARG A 18 145.99 -171.07 REMARK 500 5 CYS A 51 109.86 -42.44 REMARK 500 5 ASN A 79 62.24 60.36 REMARK 500 5 VAL A 104 -63.11 -94.27 REMARK 500 5 MET A 124 48.19 -85.30 REMARK 500 5 ASN A 175 151.30 -43.74 REMARK 500 5 GLU A 210 97.76 -57.01 REMARK 500 6 PHE A 3 96.03 -60.33 REMARK 500 6 LYS A 5 30.40 -87.04 REMARK 500 6 HIS A 7 105.88 -59.92 REMARK 500 6 CYS A 51 109.72 -41.89 REMARK 500 6 VAL A 104 -60.66 -104.39 REMARK 500 6 ALA A 121 50.28 -140.35 REMARK 500 6 MET A 124 42.17 -88.18 REMARK 500 6 ARG A 125 148.16 179.80 REMARK 500 6 ASP A 164 27.45 81.95 REMARK 500 7 LYS A 5 30.11 -87.21 REMARK 500 7 ASN A 19 91.13 -66.95 REMARK 500 7 ALA A 121 50.29 -109.35 REMARK 500 7 MET A 124 44.57 -84.40 REMARK 500 7 TYR A 134 54.42 -113.95 REMARK 500 7 ARG A 167 162.27 -49.99 REMARK 500 7 ILE A 203 -56.04 -123.46 REMARK 500 7 CYS A 206 98.51 -53.57 REMARK 500 REMARK 500 THIS ENTRY HAS 139 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6093 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE AND DYNAMICS OF THE REDUCED FORM OF METHIONINE REMARK 900 SULFOXIDE REDUCTASE A FROM ESCHERICHIA COLI, A 23 KDA PROTEIN DBREF 2GT3 A 1 211 UNP P0A744 MSRA_ECOLI 1 211 SEQADV 2GT3 MET A 0 UNP P0A744 INITIATING METHIONINE SEQRES 1 A 212 MET SER LEU PHE ASP LYS LYS HIS LEU VAL SER PRO ALA SEQRES 2 A 212 ASP ALA LEU PRO GLY ARG ASN THR PRO MET PRO VAL ALA SEQRES 3 A 212 THR LEU HIS ALA VAL ASN GLY HIS SER MET THR ASN VAL SEQRES 4 A 212 PRO ASP GLY MET GLU ILE ALA ILE PHE ALA MET GLY CYS SEQRES 5 A 212 PHE TRP GLY VAL GLU ARG LEU PHE TRP GLN LEU PRO GLY SEQRES 6 A 212 VAL TYR SER THR ALA ALA GLY TYR THR GLY GLY TYR THR SEQRES 7 A 212 PRO ASN PRO THR TYR ARG GLU VAL CYS SER GLY ASP THR SEQRES 8 A 212 GLY HIS ALA GLU ALA VAL ARG ILE VAL TYR ASP PRO SER SEQRES 9 A 212 VAL ILE SER TYR GLU GLN LEU LEU GLN VAL PHE TRP GLU SEQRES 10 A 212 ASN HIS ASP PRO ALA GLN GLY MET ARG GLN GLY ASN ASP SEQRES 11 A 212 HIS GLY THR GLN TYR ARG SER ALA ILE TYR PRO LEU THR SEQRES 12 A 212 PRO GLU GLN ASP ALA ALA ALA ARG ALA SER LEU GLU ARG SEQRES 13 A 212 PHE GLN ALA ALA MET LEU ALA ALA ASP ASP ASP ARG HIS SEQRES 14 A 212 ILE THR THR GLU ILE ALA ASN ALA THR PRO PHE TYR TYR SEQRES 15 A 212 ALA GLU ASP ASP HIS GLN GLN TYR LEU HIS LYS ASN PRO SEQRES 16 A 212 TYR GLY TYR CYS GLY ILE GLY GLY ILE GLY VAL CYS LEU SEQRES 17 A 212 PRO PRO GLU ALA HELIX 1 1 CYS A 51 GLN A 61 1 11 HELIX 2 2 THR A 81 GLY A 88 1 8 HELIX 3 3 SER A 106 HIS A 118 1 13 HELIX 4 4 THR A 142 ALA A 163 1 22 HELIX 5 5 GLN A 188 ASN A 193 1 6 SHEET 1 A 6 GLU A 172 ILE A 173 0 SHEET 2 A 6 ALA A 137 TYR A 139 1 N ILE A 138 O GLU A 172 SHEET 3 A 6 GLU A 43 ALA A 48 -1 N ALA A 48 O ALA A 137 SHEET 4 A 6 ALA A 93 TYR A 100 -1 O ILE A 98 N ALA A 45 SHEET 5 A 6 VAL A 65 THR A 73 -1 N THR A 73 O ALA A 93 SHEET 6 A 6 TYR A 180 TYR A 181 -1 O TYR A 180 N TYR A 72 SHEET 1 B 2 ARG A 125 GLN A 126 0 SHEET 2 B 2 ASP A 129 HIS A 130 -1 O ASP A 129 N GLN A 126 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1