HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 01-MAY-06 2GUK TITLE CRYSTAL STRUCTURE OF THE CONSERVED PROTEIN OF UNKNOWN FUNCTION FROM TITLE 2 PORPHYROMONAS GINGIVALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN PG1857; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORPHYROMONAS GINGIVALIS; SOURCE 3 ORGANISM_TAXID: 242619; SOURCE 4 STRAIN: W83; SOURCE 5 GENE: PG1587, GENEID:2551814; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ALPHA-BETA, ALPHA-HELICAL BUNDLE, STRUCTURAL GENOMICS, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,P.QUARTEY,S.MOY,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 13-JUL-11 2GUK 1 VERSN REVDAT 2 24-FEB-09 2GUK 1 VERSN REVDAT 1 30-MAY-06 2GUK 0 JRNL AUTH Y.KIM,P.QUARTEY,S.MOY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE CONSERVED HYPOTHETICAL PROTEIN FROM JRNL TITL 2 PORPHYROMONAS GINGIVALIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0000 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 17168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1953 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1192 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1826 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 132 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.77000 REMARK 3 B22 (A**2) : 0.77000 REMARK 3 B33 (A**2) : -1.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.220 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.192 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.435 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1959 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2652 ; 1.487 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 239 ; 5.407 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;37.093 ;22.264 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;19.238 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;20.883 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 278 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1541 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1004 ; 0.239 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 133 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.207 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1199 ; 0.957 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1902 ; 1.484 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 840 ; 2.219 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 750 ; 3.332 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9720 28.3610 110.4580 REMARK 3 T TENSOR REMARK 3 T11: 0.0362 T22: 0.0165 REMARK 3 T33: -0.0697 T12: -0.0464 REMARK 3 T13: -0.0463 T23: 0.0819 REMARK 3 L TENSOR REMARK 3 L11: 2.2019 L22: 0.6191 REMARK 3 L33: 1.7898 L12: 0.8366 REMARK 3 L13: -1.3684 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: 0.1072 S13: 0.2108 REMARK 3 S21: 0.0115 S22: 0.0416 S23: 0.0984 REMARK 3 S31: 0.0053 S32: 0.0815 S33: -0.0685 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 117 REMARK 3 ORIGIN FOR THE GROUP (A): 48.3230 26.2610 86.3360 REMARK 3 T TENSOR REMARK 3 T11: 0.0339 T22: 0.0618 REMARK 3 T33: -0.0335 T12: 0.0024 REMARK 3 T13: 0.0256 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.4258 L22: 0.3164 REMARK 3 L33: 4.5960 L12: 0.3546 REMARK 3 L13: -1.0696 L23: -1.0910 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: -0.0013 S13: -0.0625 REMARK 3 S21: -0.0472 S22: 0.0656 S23: 0.0392 REMARK 3 S31: 0.3266 S32: 0.2014 S33: -0.0432 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GUK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SBCCOLLECT, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19279 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 34.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 20.700 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 0.82000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, RESOLVE,SHELXE, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% ISO-PROPANOL, 0.1 M HEPES 7.5, 10 % REMARK 280 PEG 4K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 275K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.45600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.01400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.01400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.18400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.01400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.01400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.72800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.01400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.01400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 140.18400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.01400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.01400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.72800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 93.45600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH REMARK 300 CONSISTS OF 2 CHAIN(S). THERE IS NO EXPERIMENTAL EVIDENCE ABOUT THE REMARK 300 BIOLOGICAL UNIT. THE BIOLOGICAL UNIT COULD BE A DIMER (AS IN THE REMARK 300 ASYMMETRIC UNIT) OR A TETRAMER. SEE REMARK 350 FOR INFORMATION ON REMARK 300 GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 186.91200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 THR A 3 REMARK 465 SER A 115 REMARK 465 ASN A 116 REMARK 465 SER A 117 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ASP B 2 REMARK 465 THR B 3 REMARK 465 GLN B 4 REMARK 465 THR B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 148 O HOH A 191 6566 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 59 -56.85 56.35 REMARK 500 GLU B 60 42.08 -106.43 REMARK 500 PHE B 78 -15.89 -143.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ILE A 37 24.1 L L OUTSIDE RANGE REMARK 500 THR A 59 21.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 137 DISTANCE = 5.12 ANGSTROMS REMARK 525 HOH B 139 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH B 140 DISTANCE = 6.29 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC81122 RELATED DB: TARGETDB DBREF 2GUK A 1 117 GB 34541468 NP_905947 1 117 DBREF 2GUK B 1 117 GB 34541468 NP_905947 1 117 SEQADV 2GUK SER A -2 GB 34541468 CLONING ARTIFACT SEQADV 2GUK ASN A -1 GB 34541468 CLONING ARTIFACT SEQADV 2GUK ALA A 0 GB 34541468 CLONING ARTIFACT SEQADV 2GUK MSE A 1 GB 34541468 MET 1 MODIFIED RESIDUE SEQADV 2GUK MSE A 14 GB 34541468 MET 14 MODIFIED RESIDUE SEQADV 2GUK MSE A 27 GB 34541468 MET 27 MODIFIED RESIDUE SEQADV 2GUK MSE A 72 GB 34541468 MET 72 MODIFIED RESIDUE SEQADV 2GUK MSE A 98 GB 34541468 MET 98 MODIFIED RESIDUE SEQADV 2GUK SER B -2 GB 34541468 CLONING ARTIFACT SEQADV 2GUK ASN B -1 GB 34541468 CLONING ARTIFACT SEQADV 2GUK ALA B 0 GB 34541468 CLONING ARTIFACT SEQADV 2GUK MSE B 1 GB 34541468 MET 1 MODIFIED RESIDUE SEQADV 2GUK MSE B 14 GB 34541468 MET 14 MODIFIED RESIDUE SEQADV 2GUK MSE B 27 GB 34541468 MET 27 MODIFIED RESIDUE SEQADV 2GUK MSE B 72 GB 34541468 MET 72 MODIFIED RESIDUE SEQADV 2GUK MSE B 98 GB 34541468 MET 98 MODIFIED RESIDUE SEQRES 1 A 120 SER ASN ALA MSE ASP THR GLN THR LEU ASN SER ASP LEU SEQRES 2 A 120 ARG VAL PHE MSE HIS HIS ILE TYR GLU PHE GLU LYS GLY SEQRES 3 A 120 VAL ARG SER MSE VAL LEU ALA THR LEU ALA ASN ASP ASP SEQRES 4 A 120 ILE PRO TYR ALA GLU GLU ARG LEU ARG SER ARG GLN ILE SEQRES 5 A 120 PRO TYR PHE ALA GLN PRO THR PRO ASN THR GLU ARG THR SEQRES 6 A 120 ASN LEU PHE PHE GLY CYS LYS GLU CYS MSE GLU ALA ILE SEQRES 7 A 120 ARG LEU PHE VAL SER GLY ARG SER LEU ASN SER LEU THR SEQRES 8 A 120 PRO GLU GLU ASP PHE ILE ILE GLY ALA MSE LEU GLY TYR SEQRES 9 A 120 ASP ILE CYS ARG GLN CYS GLU ARG TYR CYS ARG ARG LYS SEQRES 10 A 120 SER ASN SER SEQRES 1 B 120 SER ASN ALA MSE ASP THR GLN THR LEU ASN SER ASP LEU SEQRES 2 B 120 ARG VAL PHE MSE HIS HIS ILE TYR GLU PHE GLU LYS GLY SEQRES 3 B 120 VAL ARG SER MSE VAL LEU ALA THR LEU ALA ASN ASP ASP SEQRES 4 B 120 ILE PRO TYR ALA GLU GLU ARG LEU ARG SER ARG GLN ILE SEQRES 5 B 120 PRO TYR PHE ALA GLN PRO THR PRO ASN THR GLU ARG THR SEQRES 6 B 120 ASN LEU PHE PHE GLY CYS LYS GLU CYS MSE GLU ALA ILE SEQRES 7 B 120 ARG LEU PHE VAL SER GLY ARG SER LEU ASN SER LEU THR SEQRES 8 B 120 PRO GLU GLU ASP PHE ILE ILE GLY ALA MSE LEU GLY TYR SEQRES 9 B 120 ASP ILE CYS ARG GLN CYS GLU ARG TYR CYS ARG ARG LYS SEQRES 10 B 120 SER ASN SER MODRES 2GUK MSE A 14 MET SELENOMETHIONINE MODRES 2GUK MSE A 27 MET SELENOMETHIONINE MODRES 2GUK MSE A 72 MET SELENOMETHIONINE MODRES 2GUK MSE A 98 MET SELENOMETHIONINE MODRES 2GUK MSE B 14 MET SELENOMETHIONINE MODRES 2GUK MSE B 27 MET SELENOMETHIONINE MODRES 2GUK MSE B 72 MET SELENOMETHIONINE MODRES 2GUK MSE B 98 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 27 8 HET MSE A 72 8 HET MSE A 98 8 HET MSE B 14 8 HET MSE B 27 8 HET MSE B 72 8 HET MSE B 98 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *132(H2 O) HELIX 1 1 ASN A 7 GLY A 23 1 17 HELIX 2 2 ASP A 36 ARG A 47 1 12 HELIX 3 3 CYS A 68 SER A 80 1 13 HELIX 4 4 SER A 83 LEU A 87 5 5 HELIX 5 5 THR A 88 LEU A 99 1 12 HELIX 6 6 ASP A 102 LYS A 114 1 13 HELIX 7 7 ASN B 7 LYS B 22 1 16 HELIX 8 8 ASP B 36 ARG B 47 1 12 HELIX 9 9 CYS B 68 SER B 80 1 13 HELIX 10 10 SER B 83 LEU B 87 5 5 HELIX 11 11 THR B 88 LEU B 99 1 12 HELIX 12 12 ASP B 102 SER B 117 1 16 SHEET 1 A 3 MSE A 27 ALA A 33 0 SHEET 2 A 3 ARG A 61 GLY A 67 -1 O LEU A 64 N ALA A 30 SHEET 3 A 3 TYR A 51 GLN A 54 -1 N GLN A 54 O ASN A 63 SHEET 1 B 3 MSE B 27 ALA B 33 0 SHEET 2 B 3 ARG B 61 GLY B 67 -1 O LEU B 64 N ALA B 30 SHEET 3 B 3 TYR B 51 PRO B 55 -1 N PHE B 52 O PHE B 65 SSBOND 1 CYS A 68 CYS B 104 1555 1555 2.09 SSBOND 2 CYS A 71 CYS B 107 1555 1555 2.04 SSBOND 3 CYS A 104 CYS B 68 1555 1555 2.09 SSBOND 4 CYS A 107 CYS B 71 1555 1555 2.07 LINK C PHE A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N HIS A 15 1555 1555 1.33 LINK C SER A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N VAL A 28 1555 1555 1.33 LINK C CYS A 71 N MSE A 72 1555 1555 1.33 LINK C MSE A 72 N AGLU A 73 1555 1555 1.33 LINK C MSE A 72 N BGLU A 73 1555 1555 1.34 LINK C ALA A 97 N MSE A 98 1555 1555 1.33 LINK C MSE A 98 N LEU A 99 1555 1555 1.33 LINK C PHE B 13 N MSE B 14 1555 1555 1.33 LINK C MSE B 14 N HIS B 15 1555 1555 1.33 LINK C SER B 26 N MSE B 27 1555 1555 1.33 LINK C MSE B 27 N VAL B 28 1555 1555 1.34 LINK C CYS B 71 N MSE B 72 1555 1555 1.33 LINK C MSE B 72 N BGLU B 73 1555 1555 1.33 LINK C MSE B 72 N AGLU B 73 1555 1555 1.33 LINK C ALA B 97 N MSE B 98 1555 1555 1.33 LINK C MSE B 98 N LEU B 99 1555 1555 1.33 CRYST1 50.028 50.028 186.912 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019989 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005350 0.00000