HEADER UNKNOWN FUNCTION 01-MAY-06 2GUV TITLE CONFORMATIONAL TRANSITION BETWEEN FOUR- AND FIVE-STRANDED TITLE 2 PHENYLALANINE ZIPPERS DETERMINED BY A LOCAL PACKING INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR OUTER MEMBRANE LIPOPROTEIN; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: MUREIN-LIPOPROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: LPP, MLPA, MULI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21/PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PF14 KEYWDS LIPOPROTEIN, PROTEIN FOLDING, PENTAMER, PHENYLALANINE-ZIPPER, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.LIU,Q.ZHENG,Y.DENG,N.R.KALLENBACH,M.LU REVDAT 6 30-AUG-23 2GUV 1 REMARK REVDAT 5 20-OCT-21 2GUV 1 SEQADV REVDAT 4 13-JUL-11 2GUV 1 VERSN REVDAT 3 24-FEB-09 2GUV 1 VERSN REVDAT 2 01-AUG-06 2GUV 1 JRNL REVDAT 1 25-JUL-06 2GUV 0 JRNL AUTH J.LIU,Q.ZHENG,Y.DENG,N.R.KALLENBACH,M.LU JRNL TITL CONFORMATIONAL TRANSITION BETWEEN FOUR AND FIVE-STRANDED JRNL TITL 2 PHENYLALANINE ZIPPERS DETERMINED BY A LOCAL PACKING JRNL TITL 3 INTERACTION. JRNL REF J.MOL.BIOL. V. 361 168 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16828114 JRNL DOI 10.1016/J.JMB.2006.05.063 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 36447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4071 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2675 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 273 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2420 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 12.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : -0.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.091 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.241 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2490 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3325 ; 1.250 ; 1.858 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 4.094 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;30.886 ;23.947 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 375 ;14.966 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;17.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 290 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2130 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1232 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1817 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 198 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 82 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 71 ; 0.133 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1422 ; 0.989 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2215 ; 1.664 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1178 ; 2.822 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1110 ; 4.106 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 56 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3610 15.4040 24.3810 REMARK 3 T TENSOR REMARK 3 T11: -0.1075 T22: -0.0975 REMARK 3 T33: -0.1475 T12: 0.0114 REMARK 3 T13: 0.0117 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.6165 L22: 0.1996 REMARK 3 L33: 6.7336 L12: -0.0224 REMARK 3 L13: -2.7745 L23: 0.0614 REMARK 3 S TENSOR REMARK 3 S11: 0.1126 S12: 0.0406 S13: 0.0512 REMARK 3 S21: 0.0162 S22: -0.0390 S23: -0.0011 REMARK 3 S31: -0.4171 S32: -0.1508 S33: -0.0736 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 56 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3620 8.8250 21.9440 REMARK 3 T TENSOR REMARK 3 T11: -0.1357 T22: -0.1099 REMARK 3 T33: -0.1435 T12: 0.0023 REMARK 3 T13: 0.0134 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.4131 L22: 0.3129 REMARK 3 L33: 4.3270 L12: -0.4522 REMARK 3 L13: -2.9568 L23: 0.6002 REMARK 3 S TENSOR REMARK 3 S11: 0.0406 S12: 0.1144 S13: -0.0280 REMARK 3 S21: -0.0377 S22: -0.0349 S23: 0.0142 REMARK 3 S31: -0.1475 S32: -0.1652 S33: -0.0058 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 56 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1900 2.4610 24.4540 REMARK 3 T TENSOR REMARK 3 T11: -0.1355 T22: -0.1200 REMARK 3 T33: -0.1262 T12: 0.0029 REMARK 3 T13: 0.0209 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.7682 L22: 0.2145 REMARK 3 L33: 6.2893 L12: -0.5074 REMARK 3 L13: -5.1108 L23: 0.6220 REMARK 3 S TENSOR REMARK 3 S11: -0.1563 S12: 0.1535 S13: -0.1979 REMARK 3 S21: 0.0027 S22: -0.0604 S23: 0.0328 REMARK 3 S31: 0.1318 S32: -0.1444 S33: 0.2167 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 56 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4730 4.6440 28.5220 REMARK 3 T TENSOR REMARK 3 T11: -0.1332 T22: -0.1028 REMARK 3 T33: -0.1214 T12: 0.0036 REMARK 3 T13: 0.0191 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 6.2747 L22: 0.2409 REMARK 3 L33: 7.3303 L12: 0.9017 REMARK 3 L13: -6.4222 L23: -0.9489 REMARK 3 S TENSOR REMARK 3 S11: -0.1952 S12: -0.2154 S13: -0.2804 REMARK 3 S21: -0.0195 S22: -0.0632 S23: -0.0235 REMARK 3 S31: 0.1527 S32: 0.2777 S33: 0.2585 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 56 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3030 12.9380 28.6010 REMARK 3 T TENSOR REMARK 3 T11: -0.1007 T22: -0.1071 REMARK 3 T33: -0.1411 T12: -0.0193 REMARK 3 T13: 0.0094 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 2.7941 L22: 0.2405 REMARK 3 L33: 8.9065 L12: 0.5787 REMARK 3 L13: -4.3764 L23: -1.2427 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: -0.1906 S13: -0.0186 REMARK 3 S21: 0.0167 S22: -0.0754 S23: -0.0007 REMARK 3 S31: -0.1271 S32: 0.2412 S33: 0.0120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2GUV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000037577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 67.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : 0.05200 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.32300 REMARK 200 R SYM FOR SHELL (I) : 0.32300 REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GUS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 15% ISOPROPANOL, 1,4 REMARK 280 -BUTANEDIOL, 23% PEG4000, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.42350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A PENTAMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS C 19 OD2 ASP D 21 2.17 REMARK 500 NH2 ARG D 47 OD1 ASN E 45 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 111 O HOH D 76 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 55 44.71 -104.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EQ7 RELATED DB: PDB REMARK 900 CORE STRUCTURE OF THE OUTER MEMBRANE LIPOPROTEIN FROM ESCHERICHIA REMARK 900 COLI AT 1.9 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 2GUS RELATED DB: PDB REMARK 900 CONFORMATIONAL TRANSITION BETWEEN FOUR- AND FIVE-STRANDED REMARK 900 PHENYLALANINE ZIPPERS DETERMINED BY A LOCAL PACKING INTERACTION DBREF 2GUV A 1 56 UNP P69776 LPP_ECOLI 22 77 DBREF 2GUV B 1 56 UNP P69776 LPP_ECOLI 22 77 DBREF 2GUV C 1 56 UNP P69776 LPP_ECOLI 22 77 DBREF 2GUV D 1 56 UNP P69776 LPP_ECOLI 22 77 DBREF 2GUV E 1 56 UNP P69776 LPP_ECOLI 22 77 SEQADV 2GUV PHE A 6 UNP P69776 ILE 27 ENGINEERED MUTATION SEQADV 2GUV PHE A 9 UNP P69776 LEU 30 ENGINEERED MUTATION SEQADV 2GUV PHE A 13 UNP P69776 VAL 34 ENGINEERED MUTATION SEQADV 2GUV PHE A 16 UNP P69776 LEU 37 ENGINEERED MUTATION SEQADV 2GUV PHE A 20 UNP P69776 VAL 41 ENGINEERED MUTATION SEQADV 2GUV PHE A 23 UNP P69776 LEU 44 ENGINEERED MUTATION SEQADV 2GUV PHE A 27 UNP P69776 VAL 48 ENGINEERED MUTATION SEQADV 2GUV PHE A 30 UNP P69776 MET 51 ENGINEERED MUTATION SEQADV 2GUV PHE A 34 UNP P69776 VAL 55 ENGINEERED MUTATION SEQADV 2GUV PHE A 37 UNP P69776 ALA 58 ENGINEERED MUTATION SEQADV 2GUV PHE A 41 UNP P69776 ALA 62 ENGINEERED MUTATION SEQADV 2GUV PHE A 44 UNP P69776 ALA 65 ENGINEERED MUTATION SEQADV 2GUV PHE A 48 UNP P69776 LEU 69 ENGINEERED MUTATION SEQADV 2GUV PHE A 51 UNP P69776 MET 72 ENGINEERED MUTATION SEQADV 2GUV PHE B 6 UNP P69776 ILE 27 ENGINEERED MUTATION SEQADV 2GUV PHE B 9 UNP P69776 LEU 30 ENGINEERED MUTATION SEQADV 2GUV PHE B 13 UNP P69776 VAL 34 ENGINEERED MUTATION SEQADV 2GUV PHE B 16 UNP P69776 LEU 37 ENGINEERED MUTATION SEQADV 2GUV PHE B 20 UNP P69776 VAL 41 ENGINEERED MUTATION SEQADV 2GUV PHE B 23 UNP P69776 LEU 44 ENGINEERED MUTATION SEQADV 2GUV PHE B 27 UNP P69776 VAL 48 ENGINEERED MUTATION SEQADV 2GUV PHE B 30 UNP P69776 MET 51 ENGINEERED MUTATION SEQADV 2GUV PHE B 34 UNP P69776 VAL 55 ENGINEERED MUTATION SEQADV 2GUV PHE B 37 UNP P69776 ALA 58 ENGINEERED MUTATION SEQADV 2GUV PHE B 41 UNP P69776 ALA 62 ENGINEERED MUTATION SEQADV 2GUV PHE B 44 UNP P69776 ALA 65 ENGINEERED MUTATION SEQADV 2GUV PHE B 48 UNP P69776 LEU 69 ENGINEERED MUTATION SEQADV 2GUV PHE B 51 UNP P69776 MET 72 ENGINEERED MUTATION SEQADV 2GUV PHE C 6 UNP P69776 ILE 27 ENGINEERED MUTATION SEQADV 2GUV PHE C 9 UNP P69776 LEU 30 ENGINEERED MUTATION SEQADV 2GUV PHE C 13 UNP P69776 VAL 34 ENGINEERED MUTATION SEQADV 2GUV PHE C 16 UNP P69776 LEU 37 ENGINEERED MUTATION SEQADV 2GUV PHE C 20 UNP P69776 VAL 41 ENGINEERED MUTATION SEQADV 2GUV PHE C 23 UNP P69776 LEU 44 ENGINEERED MUTATION SEQADV 2GUV PHE C 27 UNP P69776 VAL 48 ENGINEERED MUTATION SEQADV 2GUV PHE C 30 UNP P69776 MET 51 ENGINEERED MUTATION SEQADV 2GUV PHE C 34 UNP P69776 VAL 55 ENGINEERED MUTATION SEQADV 2GUV PHE C 37 UNP P69776 ALA 58 ENGINEERED MUTATION SEQADV 2GUV PHE C 41 UNP P69776 ALA 62 ENGINEERED MUTATION SEQADV 2GUV PHE C 44 UNP P69776 ALA 65 ENGINEERED MUTATION SEQADV 2GUV PHE C 48 UNP P69776 LEU 69 ENGINEERED MUTATION SEQADV 2GUV PHE C 51 UNP P69776 MET 72 ENGINEERED MUTATION SEQADV 2GUV PHE D 6 UNP P69776 ILE 27 ENGINEERED MUTATION SEQADV 2GUV PHE D 9 UNP P69776 LEU 30 ENGINEERED MUTATION SEQADV 2GUV PHE D 13 UNP P69776 VAL 34 ENGINEERED MUTATION SEQADV 2GUV PHE D 16 UNP P69776 LEU 37 ENGINEERED MUTATION SEQADV 2GUV PHE D 20 UNP P69776 VAL 41 ENGINEERED MUTATION SEQADV 2GUV PHE D 23 UNP P69776 LEU 44 ENGINEERED MUTATION SEQADV 2GUV PHE D 27 UNP P69776 VAL 48 ENGINEERED MUTATION SEQADV 2GUV PHE D 30 UNP P69776 MET 51 ENGINEERED MUTATION SEQADV 2GUV PHE D 34 UNP P69776 VAL 55 ENGINEERED MUTATION SEQADV 2GUV PHE D 37 UNP P69776 ALA 58 ENGINEERED MUTATION SEQADV 2GUV PHE D 41 UNP P69776 ALA 62 ENGINEERED MUTATION SEQADV 2GUV PHE D 44 UNP P69776 ALA 65 ENGINEERED MUTATION SEQADV 2GUV PHE D 48 UNP P69776 LEU 69 ENGINEERED MUTATION SEQADV 2GUV PHE D 51 UNP P69776 MET 72 ENGINEERED MUTATION SEQADV 2GUV PHE E 6 UNP P69776 ILE 27 ENGINEERED MUTATION SEQADV 2GUV PHE E 9 UNP P69776 LEU 30 ENGINEERED MUTATION SEQADV 2GUV PHE E 13 UNP P69776 VAL 34 ENGINEERED MUTATION SEQADV 2GUV PHE E 16 UNP P69776 LEU 37 ENGINEERED MUTATION SEQADV 2GUV PHE E 20 UNP P69776 VAL 41 ENGINEERED MUTATION SEQADV 2GUV PHE E 23 UNP P69776 LEU 44 ENGINEERED MUTATION SEQADV 2GUV PHE E 27 UNP P69776 VAL 48 ENGINEERED MUTATION SEQADV 2GUV PHE E 30 UNP P69776 MET 51 ENGINEERED MUTATION SEQADV 2GUV PHE E 34 UNP P69776 VAL 55 ENGINEERED MUTATION SEQADV 2GUV PHE E 37 UNP P69776 ALA 58 ENGINEERED MUTATION SEQADV 2GUV PHE E 41 UNP P69776 ALA 62 ENGINEERED MUTATION SEQADV 2GUV PHE E 44 UNP P69776 ALA 65 ENGINEERED MUTATION SEQADV 2GUV PHE E 48 UNP P69776 LEU 69 ENGINEERED MUTATION SEQADV 2GUV PHE E 51 UNP P69776 MET 72 ENGINEERED MUTATION SEQRES 1 A 56 SER SER ASN ALA LYS PHE ASP GLN PHE SER SER ASP PHE SEQRES 2 A 56 GLN THR PHE ASN ALA LYS PHE ASP GLN PHE SER ASN ASP SEQRES 3 A 56 PHE ASN ALA PHE ARG SER ASP PHE GLN ALA PHE LYS ASP SEQRES 4 A 56 ASP PHE ALA ARG PHE ASN GLN ARG PHE ASP ASN PHE ALA SEQRES 5 A 56 THR LYS TYR ARG SEQRES 1 B 56 SER SER ASN ALA LYS PHE ASP GLN PHE SER SER ASP PHE SEQRES 2 B 56 GLN THR PHE ASN ALA LYS PHE ASP GLN PHE SER ASN ASP SEQRES 3 B 56 PHE ASN ALA PHE ARG SER ASP PHE GLN ALA PHE LYS ASP SEQRES 4 B 56 ASP PHE ALA ARG PHE ASN GLN ARG PHE ASP ASN PHE ALA SEQRES 5 B 56 THR LYS TYR ARG SEQRES 1 C 56 SER SER ASN ALA LYS PHE ASP GLN PHE SER SER ASP PHE SEQRES 2 C 56 GLN THR PHE ASN ALA LYS PHE ASP GLN PHE SER ASN ASP SEQRES 3 C 56 PHE ASN ALA PHE ARG SER ASP PHE GLN ALA PHE LYS ASP SEQRES 4 C 56 ASP PHE ALA ARG PHE ASN GLN ARG PHE ASP ASN PHE ALA SEQRES 5 C 56 THR LYS TYR ARG SEQRES 1 D 56 SER SER ASN ALA LYS PHE ASP GLN PHE SER SER ASP PHE SEQRES 2 D 56 GLN THR PHE ASN ALA LYS PHE ASP GLN PHE SER ASN ASP SEQRES 3 D 56 PHE ASN ALA PHE ARG SER ASP PHE GLN ALA PHE LYS ASP SEQRES 4 D 56 ASP PHE ALA ARG PHE ASN GLN ARG PHE ASP ASN PHE ALA SEQRES 5 D 56 THR LYS TYR ARG SEQRES 1 E 56 SER SER ASN ALA LYS PHE ASP GLN PHE SER SER ASP PHE SEQRES 2 E 56 GLN THR PHE ASN ALA LYS PHE ASP GLN PHE SER ASN ASP SEQRES 3 E 56 PHE ASN ALA PHE ARG SER ASP PHE GLN ALA PHE LYS ASP SEQRES 4 E 56 ASP PHE ALA ARG PHE ASN GLN ARG PHE ASP ASN PHE ALA SEQRES 5 E 56 THR LYS TYR ARG FORMUL 6 HOH *246(H2 O) HELIX 1 1 SER A 2 TYR A 55 1 54 HELIX 2 2 SER B 2 LYS B 54 1 53 HELIX 3 3 SER C 2 TYR C 55 1 54 HELIX 4 4 SER D 2 TYR D 55 1 54 HELIX 5 5 SER E 2 ARG E 56 1 55 CRYST1 32.890 48.847 68.331 90.00 100.53 90.00 P 1 21 1 10 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030404 0.000000 0.005653 0.00000 SCALE2 0.000000 0.020472 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014885 0.00000