data_2GVI # _entry.id 2GVI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GVI pdb_00002gvi 10.2210/pdb2gvi/pdb RCSB RCSB037598 ? ? WWPDB D_1000037598 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 361192 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2GVI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-05-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 1335 _citation.page_last 1346 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20944230 _citation.pdbx_database_id_DOI 10.1107/S1744309110020166 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Axelrod, H.L.' 1 ? primary 'Das, D.' 2 ? primary 'Abdubek, P.' 3 ? primary 'Astakhova, T.' 4 ? primary 'Bakolitsa, C.' 5 ? primary 'Carlton, D.' 6 ? primary 'Chen, C.' 7 ? primary 'Chiu, H.J.' 8 ? primary 'Clayton, T.' 9 ? primary 'Deller, M.C.' 10 ? primary 'Duan, L.' 11 ? primary 'Ellrott, K.' 12 ? primary 'Farr, C.L.' 13 ? primary 'Feuerhelm, J.' 14 ? primary 'Grant, J.C.' 15 ? primary 'Grzechnik, A.' 16 ? primary 'Han, G.W.' 17 ? primary 'Jaroszewski, L.' 18 ? primary 'Jin, K.K.' 19 ? primary 'Klock, H.E.' 20 ? primary 'Knuth, M.W.' 21 ? primary 'Kozbial, P.' 22 ? primary 'Krishna, S.S.' 23 ? primary 'Kumar, A.' 24 ? primary 'Lam, W.W.' 25 ? primary 'Marciano, D.' 26 ? primary 'McMullan, D.' 27 ? primary 'Miller, M.D.' 28 ? primary 'Morse, A.T.' 29 ? primary 'Nigoghossian, E.' 30 ? primary 'Nopakun, A.' 31 ? primary 'Okach, L.' 32 ? primary 'Puckett, C.' 33 ? primary 'Reyes, R.' 34 ? primary 'Sefcovic, N.' 35 ? primary 'Tien, H.J.' 36 ? primary 'Trame, C.B.' 37 ? primary 'van den Bedem, H.' 38 ? primary 'Weekes, D.' 39 ? primary 'Wooten, T.' 40 ? primary 'Xu, Q.' 41 ? primary 'Hodgson, K.O.' 42 ? primary 'Wooley, J.' 43 ? primary 'Elsliger, M.A.' 44 ? primary 'Deacon, A.M.' 45 ? primary 'Godzik, A.' 46 ? primary 'Lesley, S.A.' 47 ? primary 'Wilson, I.A.' 48 ? # _cell.entry_id 2GVI _cell.length_a 78.680 _cell.length_b 97.650 _cell.length_c 75.270 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GVI _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'conserved hypothetical protein' 23451.766 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 3 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 5 non-polymer syn 'ACETIC ACID' 60.052 8 ? ? ? ? 6 water nat water 18.015 129 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)EKLNFGIPEWAFEFHGHKCPY(MSE)P(MSE)GYRAGSYALKIAGLEKEKDHRTYLLSE(MSE)SPED(MSE)N GCFNDGAQAATGCTYGKGLFSLLGYGKLALILYRPGRKAIRVHVRNSF(MSE)DELSTRASDFFRYRKQGYEPSEIPAGA IDPVLEWISSLEDEEIFEYREIDGFTFEPVKKNGAKVRCDVCGEYTYEADAKLLNGKPVCKPDYYGKK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMEKLNFGIPEWAFEFHGHKCPYMPMGYRAGSYALKIAGLEKEKDHRTYLLSEMSPEDMNGCFNDGAQAATGCTYGKGLF SLLGYGKLALILYRPGRKAIRVHVRNSFMDELSTRASDFFRYRKQGYEPSEIPAGAIDPVLEWISSLEDEEIFEYREIDG FTFEPVKKNGAKVRCDVCGEYTYEADAKLLNGKPVCKPDYYGKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 361192 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLU n 1 4 LYS n 1 5 LEU n 1 6 ASN n 1 7 PHE n 1 8 GLY n 1 9 ILE n 1 10 PRO n 1 11 GLU n 1 12 TRP n 1 13 ALA n 1 14 PHE n 1 15 GLU n 1 16 PHE n 1 17 HIS n 1 18 GLY n 1 19 HIS n 1 20 LYS n 1 21 CYS n 1 22 PRO n 1 23 TYR n 1 24 MSE n 1 25 PRO n 1 26 MSE n 1 27 GLY n 1 28 TYR n 1 29 ARG n 1 30 ALA n 1 31 GLY n 1 32 SER n 1 33 TYR n 1 34 ALA n 1 35 LEU n 1 36 LYS n 1 37 ILE n 1 38 ALA n 1 39 GLY n 1 40 LEU n 1 41 GLU n 1 42 LYS n 1 43 GLU n 1 44 LYS n 1 45 ASP n 1 46 HIS n 1 47 ARG n 1 48 THR n 1 49 TYR n 1 50 LEU n 1 51 LEU n 1 52 SER n 1 53 GLU n 1 54 MSE n 1 55 SER n 1 56 PRO n 1 57 GLU n 1 58 ASP n 1 59 MSE n 1 60 ASN n 1 61 GLY n 1 62 CYS n 1 63 PHE n 1 64 ASN n 1 65 ASP n 1 66 GLY n 1 67 ALA n 1 68 GLN n 1 69 ALA n 1 70 ALA n 1 71 THR n 1 72 GLY n 1 73 CYS n 1 74 THR n 1 75 TYR n 1 76 GLY n 1 77 LYS n 1 78 GLY n 1 79 LEU n 1 80 PHE n 1 81 SER n 1 82 LEU n 1 83 LEU n 1 84 GLY n 1 85 TYR n 1 86 GLY n 1 87 LYS n 1 88 LEU n 1 89 ALA n 1 90 LEU n 1 91 ILE n 1 92 LEU n 1 93 TYR n 1 94 ARG n 1 95 PRO n 1 96 GLY n 1 97 ARG n 1 98 LYS n 1 99 ALA n 1 100 ILE n 1 101 ARG n 1 102 VAL n 1 103 HIS n 1 104 VAL n 1 105 ARG n 1 106 ASN n 1 107 SER n 1 108 PHE n 1 109 MSE n 1 110 ASP n 1 111 GLU n 1 112 LEU n 1 113 SER n 1 114 THR n 1 115 ARG n 1 116 ALA n 1 117 SER n 1 118 ASP n 1 119 PHE n 1 120 PHE n 1 121 ARG n 1 122 TYR n 1 123 ARG n 1 124 LYS n 1 125 GLN n 1 126 GLY n 1 127 TYR n 1 128 GLU n 1 129 PRO n 1 130 SER n 1 131 GLU n 1 132 ILE n 1 133 PRO n 1 134 ALA n 1 135 GLY n 1 136 ALA n 1 137 ILE n 1 138 ASP n 1 139 PRO n 1 140 VAL n 1 141 LEU n 1 142 GLU n 1 143 TRP n 1 144 ILE n 1 145 SER n 1 146 SER n 1 147 LEU n 1 148 GLU n 1 149 ASP n 1 150 GLU n 1 151 GLU n 1 152 ILE n 1 153 PHE n 1 154 GLU n 1 155 TYR n 1 156 ARG n 1 157 GLU n 1 158 ILE n 1 159 ASP n 1 160 GLY n 1 161 PHE n 1 162 THR n 1 163 PHE n 1 164 GLU n 1 165 PRO n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 ASN n 1 170 GLY n 1 171 ALA n 1 172 LYS n 1 173 VAL n 1 174 ARG n 1 175 CYS n 1 176 ASP n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 GLU n 1 181 TYR n 1 182 THR n 1 183 TYR n 1 184 GLU n 1 185 ALA n 1 186 ASP n 1 187 ALA n 1 188 LYS n 1 189 LEU n 1 190 LEU n 1 191 ASN n 1 192 GLY n 1 193 LYS n 1 194 PRO n 1 195 VAL n 1 196 CYS n 1 197 LYS n 1 198 PRO n 1 199 ASP n 1 200 TYR n 1 201 TYR n 1 202 GLY n 1 203 LYS n 1 204 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermoplasma _entity_src_gen.pdbx_gene_src_gene 10640422 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoplasma acidophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2303 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code CAC12236 _struct_ref.pdbx_db_accession 10640422 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEKLNFGIPEWAFEFHGHKCPYMPMGYRAGSYALKIAGLEKEKDHRTYLLSEMSPEDMNGCFNDGAQAATGCTYGKGLFS LLGYGKLALILYRPGRKAIRVHVRNSFMDELSTRASDFFRYRKQGYEPSEIPAGAIDPVLEWISSLEDEEIFEYREIDGF TFEPVKKNGAKVRCDVCGEYTYEADAKLLNGKPVCKPDYYGKK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2GVI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 204 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 10640422 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 203 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 203 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GVI GLY A 1 ? GB 10640422 ? ? 'expression tag' 0 1 1 2GVI MSE A 2 ? GB 10640422 MET 1 'modified residue' 1 2 1 2GVI MSE A 24 ? GB 10640422 MET 23 'modified residue' 23 3 1 2GVI MSE A 26 ? GB 10640422 MET 25 'modified residue' 25 4 1 2GVI MSE A 54 ? GB 10640422 MET 53 'modified residue' 53 5 1 2GVI MSE A 59 ? GB 10640422 MET 58 'modified residue' 58 6 1 2GVI MSE A 109 ? GB 10640422 MET 108 'modified residue' 108 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 2 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2GVI # loop_ _exptl_crystal.id _exptl_crystal.density_percent_sol _exptl_crystal.density_Matthews _exptl_crystal.description _exptl_crystal.density_meas _exptl_crystal.F_000 _exptl_crystal.preparation 1 56.79 2.87 ;DATA FROM A MONOCLINIC C2 CRYSTAL FORM CONTAINING SE-MET WAS USED FOR THE MAD PHASING EXPERIMENTS AND DETERMINATION OF THE STRUCTURE AT A RESOLUTION OF 2.0 ANGSTROMS. THIS 2.0 ANGSTROM MAD STRUCTURE WAS USED AS A MOLECULAR REPLACEMENT MODEL TO DETERMINE THE STRUCTURE AT AN ENHANCED RESOLUTION OF 1.87 ANGSTROMS IN THE I222 SPACEGROUP. ; ? ? ? 2 ? ? ? ? ? ? # loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.pH _exptl_crystal_grow.temp _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp_details _exptl_crystal_grow.pdbx_pH_range 1 'VAPOR DIFFUSION,SITTING DROP,NANODROP' 6.0 277 '10.0% PEG-8000, 0.2M Zn(OAc)2, 0.1M MES pH 6.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' ? . 2 'VAPOR DIFFUSION,SITTING DROP,NANODROP' 6.0 277 '0.2M MgNO3, 20.0% PEG-3350, No Buffer pH 5.8, pH 6.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' ? . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 2 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.details _diffrn_detector.pdbx_collection_date 1 CCD 'ADSC QUANTUM 315' 'Flat mirror (vertical focusing)' 2006-03-19 2 CCD 'MARMOSAIC 325 mm CCD' 'Flat collimating mirror, toroid focusing mirror' 2006-03-12 # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_scattering_type 1 M ? 'SINGLE WAVELENGTH' 1 x-ray 2 M 'Double crystal monochromator' MAD 2 x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.000001 1.0 2 0.97918 1.0 3 0.91837 1.0 4 0.97903 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_synchrotron_site 1 SYNCHROTRON BL11-1 'SSRL BEAMLINE BL11-1' ? 1.000001 SSRL 2 SYNCHROTRON BL9-2 'SSRL BEAMLINE BL9-2' ? '0.97918, 0.91837, 0.97903' SSRL # _reflns.entry_id 2GVI _reflns.d_resolution_high 1.870 _reflns.number_obs 24246 _reflns.pdbx_Rmerge_I_obs 0.114 _reflns.pdbx_netI_over_sigmaI 8.380 _reflns.percent_possible_obs 99.5 _reflns.B_iso_Wilson_estimate 28.070 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_low 30.08 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 4.05 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.87 1.94 9461 ? ? 0.698 1.27 ? ? ? 99.50 ? 99.50 1 1,2 1.94 2.01 8346 ? ? 0.528 1.67 ? ? ? 99.70 ? ? 2 1,2 2.01 2.11 10016 ? ? 0.401 2.23 ? ? ? 99.50 ? ? 3 1,2 2.11 2.22 9164 ? ? 0.279 3.12 ? ? ? 99.70 ? ? 4 1,2 2.22 2.36 9319 ? ? 0.22 3.92 ? ? ? 99.80 ? ? 5 1,2 2.36 2.54 9107 ? ? 0.161 5.18 ? ? ? 99.60 ? ? 6 1,2 2.54 2.79 9212 ? ? 0.118 6.94 ? ? ? 99.80 ? ? 7 1,2 2.79 3.19 9283 ? ? 0.075 10.02 ? ? ? 99.60 ? ? 8 1,2 3.19 4.02 9349 ? ? 0.04 16.86 ? ? ? 99.10 ? ? 9 1,2 4.02 30.1 9441 ? ? 0.024 25.78 ? ? ? 98.40 ? ? 10 1,2 # _refine.ls_d_res_high 1.870 _refine.ls_d_res_low 30.08 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.660 _refine.ls_number_reflns_obs 24246 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3). GLYCEROL, ACETATE, AND ZINC CATIONS ARE MODELED BASED ON THE CRYSTALLIZATION CONDITIONS. 4). X-RAY ANOMALOUS SCATTERING MEASUREMENTS INDICATE ZINC CATIONS ARE COORDINATED TO HIS AND CYS SIDECHAIN ATOMS. 5). ATOM RECORD CONTAINS RESIDUAL B FACTORS 6). ELECTRON DENSITY INDICATED THAT THE SIDECHAIN SULFUR ATOM OF OF CYS 61 NEAR THE PUTATIVE ACTIVE SITE IS IN COVALENT BONDING DISTANCE OF AN UNKNOWN MOLECULE, AND AN UNKNOWN LIGAND (UNL) WAS MODELED AT THIS POSITION. ; _refine.ls_R_factor_all 0.191 _refine.ls_R_factor_R_work 0.19 _refine.ls_R_factor_R_free 0.217 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1229 _refine.B_iso_mean 31.123 _refine.aniso_B[1][1] 0.560 _refine.aniso_B[2][2] 0.900 _refine.aniso_B[3][3] -1.460 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.pdbx_overall_ESU_R 0.122 _refine.pdbx_overall_ESU_R_Free 0.115 _refine.overall_SU_ML 0.089 _refine.overall_SU_B 5.854 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MAD, MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.entry_id 2GVI _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.19109 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1582 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 68 _refine_hist.number_atoms_solvent 129 _refine_hist.number_atoms_total 1779 _refine_hist.d_res_high 1.870 _refine_hist.d_res_low 30.08 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1710 0.014 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1533 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2279 1.644 1.989 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3553 1.131 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 207 3.609 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 77 29.197 23.117 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 272 10.225 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 9.874 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 225 0.097 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1906 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 367 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 298 0.179 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1452 0.125 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 804 0.177 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 886 0.081 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 165 0.153 0.500 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 2 0.144 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 38 0.140 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 111 0.141 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 43 0.220 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 1 0.090 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1075 1.530 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 419 0.328 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1627 2.323 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 753 3.861 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 649 5.003 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.870 _refine_ls_shell.d_res_low 1.919 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.770 _refine_ls_shell.number_reflns_R_work 1671 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.279 _refine_ls_shell.R_factor_R_free 0.27 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1748 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2GVI _struct.title ;Crystal structure of a putative formylmethanofuran dehydrogenase subunit e (ta1109) from thermoplasma acidophilum at 1.87 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 2GVI # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? T N N 5 ? U N N 5 ? V N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 11 ? GLY A 18 ? GLU A 10 GLY A 17 1 ? 8 HELX_P HELX_P2 2 PRO A 22 ? GLY A 39 ? PRO A 21 GLY A 38 1 ? 18 HELX_P HELX_P3 3 GLY A 61 ? GLY A 72 ? GLY A 60 GLY A 71 1 ? 12 HELX_P HELX_P4 4 ARG A 105 ? ALA A 116 ? ARG A 104 ALA A 115 1 ? 12 HELX_P HELX_P5 5 ALA A 116 ? GLY A 126 ? ALA A 115 GLY A 125 1 ? 11 HELX_P HELX_P6 6 GLU A 128 ? ILE A 132 ? GLU A 127 ILE A 131 5 ? 5 HELX_P HELX_P7 7 PRO A 133 ? LEU A 147 ? PRO A 132 LEU A 146 1 ? 15 HELX_P HELX_P8 8 GLU A 148 ? ILE A 152 ? GLU A 147 ILE A 151 1 ? 5 HELX_P HELX_P9 9 ALA A 185 ? ALA A 187 ? ALA A 184 ALA A 186 5 ? 3 HELX_P HELX_P10 10 CYS A 196 ? GLY A 202 ? CYS A 195 GLY A 201 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A GLU 3 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale2 covale both ? A TYR 23 C ? ? ? 1_555 A MSE 24 N ? ? A TYR 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A MSE 24 C ? ? ? 1_555 A PRO 25 N ? ? A MSE 23 A PRO 24 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale4 covale both ? A PRO 25 C ? ? ? 1_555 A MSE 26 N ? ? A PRO 24 A MSE 25 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A MSE 26 C ? ? ? 1_555 A GLY 27 N ? ? A MSE 25 A GLY 26 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A GLU 53 C ? ? ? 1_555 A MSE 54 N ? ? A GLU 52 A MSE 53 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A MSE 54 C ? ? ? 1_555 A SER 55 N ? ? A MSE 53 A SER 54 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A ASP 58 C ? ? ? 1_555 A MSE 59 N ? ? A ASP 57 A MSE 58 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A MSE 59 C ? ? ? 1_555 A ASN 60 N ? ? A MSE 58 A ASN 59 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale10 covale none ? A CYS 62 SG ? ? ? 1_555 G UNL . C6 ? ? A CYS 61 A UNL 400 1_555 ? ? ? ? ? ? ? 1.790 ? ? covale11 covale both ? A PHE 108 C ? ? ? 1_555 A MSE 109 N ? ? A PHE 107 A MSE 108 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale12 covale both ? A MSE 109 C ? ? ? 1_555 A ASP 110 N ? ? A MSE 108 A ASP 109 1_555 ? ? ? ? ? ? ? 1.325 ? ? metalc1 metalc ? ? A HIS 17 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 16 A ZN 300 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc2 metalc ? ? A HIS 19 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 18 A ZN 300 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc3 metalc ? ? A CYS 21 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 20 A ZN 300 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc4 metalc ? ? A CYS 62 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 61 A ZN 300 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc5 metalc ? ? A HIS 103 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 102 A ZN 302 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc6 metalc ? ? A ASP 118 OD2 ? ? ? 1_555 F ZN . ZN ? ? A ASP 117 A ZN 304 1_555 ? ? ? ? ? ? ? 2.513 ? ? metalc7 metalc ? ? A ASP 118 OD1 ? ? ? 1_555 F ZN . ZN ? ? A ASP 117 A ZN 304 1_555 ? ? ? ? ? ? ? 2.514 ? ? metalc8 metalc ? ? A GLU 131 OE2 ? ? ? 1_555 E ZN . ZN ? ? A GLU 130 A ZN 303 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc9 metalc ? ? A GLU 150 OE2 ? ? ? 6_554 E ZN . ZN ? ? A GLU 149 A ZN 303 1_555 ? ? ? ? ? ? ? 1.929 ? ? metalc10 metalc ? ? A GLU 154 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 153 A ZN 302 1_555 ? ? ? ? ? ? ? 1.976 ? ? metalc11 metalc ? ? A GLU 157 OE2 ? ? ? 6_554 F ZN . ZN ? ? A GLU 156 A ZN 304 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc12 metalc ? ? A CYS 175 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 174 A ZN 301 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc13 metalc ? ? A CYS 178 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 177 A ZN 301 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc14 metalc ? ? A CYS 196 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 195 A ZN 301 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc15 metalc ? ? A ASP 199 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 198 A ZN 301 1_555 ? ? ? ? ? ? ? 1.984 ? ? metalc16 metalc ? ? D ZN . ZN ? ? ? 1_555 Q ACY . OXT ? ? A ZN 302 A ACY 410 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc17 metalc ? ? D ZN . ZN ? ? ? 1_555 Q ACY . O ? ? A ZN 302 A ACY 410 1_555 ? ? ? ? ? ? ? 1.993 ? ? metalc18 metalc ? ? D ZN . ZN ? ? ? 1_555 V HOH . O ? ? A ZN 302 A HOH 472 1_555 ? ? ? ? ? ? ? 1.855 ? ? metalc19 metalc ? ? E ZN . ZN ? ? ? 1_555 R ACY . O ? ? A ZN 303 A ACY 411 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc20 metalc ? ? F ZN . ZN ? ? ? 1_555 M EDO . O1 ? ? A ZN 304 A EDO 406 1_555 ? ? ? ? ? ? ? 2.558 ? ? metalc21 metalc ? ? F ZN . ZN ? ? ? 1_555 M EDO . O2 ? ? A ZN 304 A EDO 406 1_555 ? ? ? ? ? ? ? 1.900 ? ? metalc22 metalc ? ? F ZN . ZN ? ? ? 1_555 V HOH . O ? ? A ZN 304 A HOH 513 1_555 ? ? ? ? ? ? ? 2.191 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 5 ? ASN A 6 ? LEU A 4 ASN A 5 A 2 ILE A 9 ? PRO A 10 ? ILE A 8 PRO A 9 B 1 PHE A 80 ? LEU A 82 ? PHE A 79 LEU A 81 B 2 TYR A 49 ? SER A 52 ? TYR A 48 SER A 51 B 3 ALA A 89 ? TYR A 93 ? ALA A 88 TYR A 92 B 4 ALA A 99 ? VAL A 104 ? ALA A 98 VAL A 103 B 5 PHE A 153 ? ILE A 158 ? PHE A 152 ILE A 157 C 1 LYS A 172 ? ARG A 174 ? LYS A 171 ARG A 173 C 2 TYR A 181 ? TYR A 183 ? TYR A 180 TYR A 182 D 1 LYS A 188 ? LEU A 190 ? LYS A 187 LEU A 189 D 2 LYS A 193 ? VAL A 195 ? LYS A 192 VAL A 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 6 ? N ASN A 5 O ILE A 9 ? O ILE A 8 B 1 2 O SER A 81 ? O SER A 80 N SER A 52 ? N SER A 51 B 2 3 N TYR A 49 ? N TYR A 48 O TYR A 93 ? O TYR A 92 B 3 4 N LEU A 90 ? N LEU A 89 O VAL A 102 ? O VAL A 101 B 4 5 N ARG A 101 ? N ARG A 100 O ARG A 156 ? O ARG A 155 C 1 2 N VAL A 173 ? N VAL A 172 O THR A 182 ? O THR A 181 D 1 2 N LYS A 188 ? N LYS A 187 O VAL A 195 ? O VAL A 194 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 300 ? 5 'BINDING SITE FOR RESIDUE ZN A 300' AC2 Software A ZN 301 ? 4 'BINDING SITE FOR RESIDUE ZN A 301' AC3 Software A ZN 302 ? 4 'BINDING SITE FOR RESIDUE ZN A 302' AC4 Software A ZN 303 ? 4 'BINDING SITE FOR RESIDUE ZN A 303' AC5 Software A ZN 304 ? 4 'BINDING SITE FOR RESIDUE ZN A 304' AC6 Software A UNL 400 ? 7 'BINDING SITE FOR RESIDUE UNL A 400' AC7 Software A EDO 401 ? 6 'BINDING SITE FOR RESIDUE EDO A 401' AC8 Software A EDO 402 ? 1 'BINDING SITE FOR RESIDUE EDO A 402' AC9 Software A EDO 403 ? 3 'BINDING SITE FOR RESIDUE EDO A 403' BC1 Software A EDO 404 ? 5 'BINDING SITE FOR RESIDUE EDO A 404' BC2 Software A EDO 405 ? 6 'BINDING SITE FOR RESIDUE EDO A 405' BC3 Software A EDO 406 ? 5 'BINDING SITE FOR RESIDUE EDO A 406' BC4 Software A ACY 407 ? 6 'BINDING SITE FOR RESIDUE ACY A 407' BC5 Software A ACY 408 ? 2 'BINDING SITE FOR RESIDUE ACY A 408' BC6 Software A ACY 409 ? 2 'BINDING SITE FOR RESIDUE ACY A 409' BC7 Software A ACY 410 ? 7 'BINDING SITE FOR RESIDUE ACY A 410' BC8 Software A ACY 411 ? 5 'BINDING SITE FOR RESIDUE ACY A 411' BC9 Software A ACY 412 ? 4 'BINDING SITE FOR RESIDUE ACY A 412' CC1 Software A ACY 413 ? 3 'BINDING SITE FOR RESIDUE ACY A 413' CC2 Software A ACY 414 ? 3 'BINDING SITE FOR RESIDUE ACY A 414' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 17 ? HIS A 16 . ? 1_555 ? 2 AC1 5 HIS A 19 ? HIS A 18 . ? 1_555 ? 3 AC1 5 CYS A 21 ? CYS A 20 . ? 1_555 ? 4 AC1 5 CYS A 62 ? CYS A 61 . ? 1_555 ? 5 AC1 5 UNL G . ? UNL A 400 . ? 1_555 ? 6 AC2 4 CYS A 175 ? CYS A 174 . ? 1_555 ? 7 AC2 4 CYS A 178 ? CYS A 177 . ? 1_555 ? 8 AC2 4 CYS A 196 ? CYS A 195 . ? 1_555 ? 9 AC2 4 ASP A 199 ? ASP A 198 . ? 1_555 ? 10 AC3 4 HIS A 103 ? HIS A 102 . ? 1_555 ? 11 AC3 4 GLU A 154 ? GLU A 153 . ? 1_555 ? 12 AC3 4 ACY Q . ? ACY A 410 . ? 1_555 ? 13 AC3 4 HOH V . ? HOH A 472 . ? 1_555 ? 14 AC4 4 GLU A 131 ? GLU A 130 . ? 1_555 ? 15 AC4 4 GLU A 150 ? GLU A 149 . ? 6_554 ? 16 AC4 4 ACY R . ? ACY A 411 . ? 1_555 ? 17 AC4 4 HOH V . ? HOH A 521 . ? 1_555 ? 18 AC5 4 ASP A 118 ? ASP A 117 . ? 1_555 ? 19 AC5 4 GLU A 157 ? GLU A 156 . ? 6_554 ? 20 AC5 4 EDO M . ? EDO A 406 . ? 1_555 ? 21 AC5 4 HOH V . ? HOH A 513 . ? 1_555 ? 22 AC6 7 TYR A 23 ? TYR A 22 . ? 1_555 ? 23 AC6 7 HIS A 46 ? HIS A 45 . ? 3_655 ? 24 AC6 7 ASN A 60 ? ASN A 59 . ? 1_555 ? 25 AC6 7 CYS A 62 ? CYS A 61 . ? 1_555 ? 26 AC6 7 ARG A 123 ? ARG A 122 . ? 1_555 ? 27 AC6 7 PRO A 129 ? PRO A 128 . ? 1_555 ? 28 AC6 7 ZN B . ? ZN A 300 . ? 1_555 ? 29 AC7 6 ASP A 118 ? ASP A 117 . ? 1_555 ? 30 AC7 6 ARG A 121 ? ARG A 120 . ? 1_555 ? 31 AC7 6 TYR A 122 ? TYR A 121 . ? 1_555 ? 32 AC7 6 TYR A 155 ? TYR A 154 . ? 6_554 ? 33 AC7 6 GLU A 157 ? GLU A 156 . ? 6_554 ? 34 AC7 6 HOH V . ? HOH A 463 . ? 6_554 ? 35 AC8 1 HOH V . ? HOH A 456 . ? 3_655 ? 36 AC9 3 ASN A 64 ? ASN A 63 . ? 3_655 ? 37 AC9 3 TYR A 75 ? TYR A 74 . ? 1_555 ? 38 AC9 3 GLY A 76 ? GLY A 75 . ? 1_555 ? 39 BC1 5 LYS A 36 ? LYS A 35 . ? 1_555 ? 40 BC1 5 ILE A 37 ? ILE A 36 . ? 1_555 ? 41 BC1 5 ARG A 121 ? ARG A 120 . ? 6_555 ? 42 BC1 5 LYS A 124 ? LYS A 123 . ? 6_555 ? 43 BC1 5 GLN A 125 ? GLN A 124 . ? 6_555 ? 44 BC2 6 ILE A 37 ? ILE A 36 . ? 6_554 ? 45 BC2 6 ALA A 38 ? ALA A 37 . ? 6_554 ? 46 BC2 6 ARG A 121 ? ARG A 120 . ? 1_555 ? 47 BC2 6 GLU A 157 ? GLU A 156 . ? 6_554 ? 48 BC2 6 EDO M . ? EDO A 406 . ? 1_555 ? 49 BC2 6 HOH V . ? HOH A 515 . ? 1_555 ? 50 BC3 5 ASP A 118 ? ASP A 117 . ? 1_555 ? 51 BC3 5 GLU A 157 ? GLU A 156 . ? 6_554 ? 52 BC3 5 ZN F . ? ZN A 304 . ? 1_555 ? 53 BC3 5 EDO L . ? EDO A 405 . ? 1_555 ? 54 BC3 5 HOH V . ? HOH A 516 . ? 1_555 ? 55 BC4 6 ARG A 105 ? ARG A 104 . ? 1_555 ? 56 BC4 6 ASN A 106 ? ASN A 105 . ? 1_555 ? 57 BC4 6 SER A 107 ? SER A 106 . ? 1_555 ? 58 BC4 6 GLU A 154 ? GLU A 153 . ? 1_555 ? 59 BC4 6 ACY Q . ? ACY A 410 . ? 1_555 ? 60 BC4 6 HOH V . ? HOH A 475 . ? 1_555 ? 61 BC5 2 ASP A 176 ? ASP A 175 . ? 1_555 ? 62 BC5 2 LYS A 193 ? LYS A 192 . ? 1_555 ? 63 BC6 2 ARG A 101 ? ARG A 100 . ? 1_555 ? 64 BC6 2 ARG A 156 ? ARG A 155 . ? 1_555 ? 65 BC7 7 HIS A 103 ? HIS A 102 . ? 1_555 ? 66 BC7 7 ASN A 106 ? ASN A 105 . ? 1_555 ? 67 BC7 7 GLU A 154 ? GLU A 153 . ? 1_555 ? 68 BC7 7 GLU A 180 ? GLU A 179 . ? 3_655 ? 69 BC7 7 ZN D . ? ZN A 302 . ? 1_555 ? 70 BC7 7 ACY N . ? ACY A 407 . ? 1_555 ? 71 BC7 7 HOH V . ? HOH A 472 . ? 1_555 ? 72 BC8 5 ARG A 105 ? ARG A 104 . ? 6_554 ? 73 BC8 5 GLU A 131 ? GLU A 130 . ? 1_555 ? 74 BC8 5 GLU A 150 ? GLU A 149 . ? 6_554 ? 75 BC8 5 ZN E . ? ZN A 303 . ? 1_555 ? 76 BC8 5 HOH V . ? HOH A 521 . ? 1_555 ? 77 BC9 4 LYS A 87 ? LYS A 86 . ? 3_655 ? 78 BC9 4 CYS A 178 ? CYS A 177 . ? 1_555 ? 79 BC9 4 GLU A 180 ? GLU A 179 . ? 1_555 ? 80 BC9 4 ASP A 199 ? ASP A 198 . ? 1_555 ? 81 CC1 3 ARG A 29 ? ARG A 28 . ? 1_555 ? 82 CC1 3 ASP A 149 ? ASP A 148 . ? 1_555 ? 83 CC1 3 HOH V . ? HOH A 423 . ? 1_555 ? 84 CC2 3 ASN A 6 ? ASN A 5 . ? 1_555 ? 85 CC2 3 GLU A 11 ? GLU A 10 . ? 1_555 ? 86 CC2 3 HOH V . ? HOH A 538 . ? 1_555 ? # _atom_sites.entry_id 2GVI _atom_sites.fract_transf_matrix[1][1] 0.012710 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010241 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013286 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 PHE 7 6 6 PHE PHE A . n A 1 8 GLY 8 7 7 GLY GLY A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 PRO 10 9 9 PRO PRO A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 TRP 12 11 11 TRP TRP A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 PHE 14 13 13 PHE PHE A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 PHE 16 15 15 PHE PHE A . n A 1 17 HIS 17 16 16 HIS HIS A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 HIS 19 18 18 HIS HIS A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 CYS 21 20 20 CYS CYS A . n A 1 22 PRO 22 21 21 PRO PRO A . n A 1 23 TYR 23 22 22 TYR TYR A . n A 1 24 MSE 24 23 23 MSE MSE A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 MSE 26 25 25 MSE MSE A . n A 1 27 GLY 27 26 26 GLY GLY A . n A 1 28 TYR 28 27 27 TYR TYR A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 TYR 33 32 32 TYR TYR A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 LEU 40 39 39 LEU LEU A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 LYS 44 43 43 LYS LYS A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 HIS 46 45 45 HIS HIS A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 SER 52 51 51 SER SER A . n A 1 53 GLU 53 52 52 GLU GLU A . n A 1 54 MSE 54 53 53 MSE MSE A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 MSE 59 58 58 MSE MSE A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 GLY 61 60 60 GLY GLY A . n A 1 62 CYS 62 61 61 CYS CYS A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 ASN 64 63 63 ASN ASN A . n A 1 65 ASP 65 64 64 ASP ASP A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 GLN 68 67 67 GLN GLN A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 CYS 73 72 72 CYS CYS A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 GLY 78 77 77 GLY GLY A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 PHE 80 79 79 PHE PHE A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 TYR 85 84 84 TYR TYR A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 LYS 87 86 86 LYS LYS A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 TYR 93 92 92 TYR TYR A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 PRO 95 94 94 PRO PRO A . n A 1 96 GLY 96 95 95 GLY GLY A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 HIS 103 102 102 HIS HIS A . n A 1 104 VAL 104 103 103 VAL VAL A . n A 1 105 ARG 105 104 104 ARG ARG A . n A 1 106 ASN 106 105 105 ASN ASN A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 PHE 108 107 107 PHE PHE A . n A 1 109 MSE 109 108 108 MSE MSE A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 SER 113 112 112 SER SER A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 SER 117 116 116 SER SER A . n A 1 118 ASP 118 117 117 ASP ASP A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 TYR 122 121 121 TYR TYR A . n A 1 123 ARG 123 122 122 ARG ARG A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 GLN 125 124 124 GLN GLN A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 TYR 127 126 126 TYR TYR A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 SER 130 129 129 SER SER A . n A 1 131 GLU 131 130 130 GLU GLU A . n A 1 132 ILE 132 131 131 ILE ILE A . n A 1 133 PRO 133 132 132 PRO PRO A . n A 1 134 ALA 134 133 133 ALA ALA A . n A 1 135 GLY 135 134 134 GLY GLY A . n A 1 136 ALA 136 135 135 ALA ALA A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 ASP 138 137 137 ASP ASP A . n A 1 139 PRO 139 138 138 PRO PRO A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 LEU 141 140 140 LEU LEU A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 TRP 143 142 142 TRP TRP A . n A 1 144 ILE 144 143 143 ILE ILE A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 LEU 147 146 146 LEU LEU A . n A 1 148 GLU 148 147 147 GLU GLU A . n A 1 149 ASP 149 148 148 ASP ASP A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 GLU 151 150 150 GLU GLU A . n A 1 152 ILE 152 151 151 ILE ILE A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 ARG 156 155 155 ARG ARG A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 ILE 158 157 157 ILE ILE A . n A 1 159 ASP 159 158 158 ASP ASP A . n A 1 160 GLY 160 159 159 GLY GLY A . n A 1 161 PHE 161 160 160 PHE PHE A . n A 1 162 THR 162 161 161 THR THR A . n A 1 163 PHE 163 162 162 PHE PHE A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 PRO 165 164 164 PRO PRO A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 LYS 167 166 166 LYS LYS A . n A 1 168 LYS 168 167 167 LYS LYS A . n A 1 169 ASN 169 168 168 ASN ASN A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 LYS 172 171 171 LYS LYS A . n A 1 173 VAL 173 172 172 VAL VAL A . n A 1 174 ARG 174 173 173 ARG ARG A . n A 1 175 CYS 175 174 174 CYS CYS A . n A 1 176 ASP 176 175 175 ASP ASP A . n A 1 177 VAL 177 176 176 VAL VAL A . n A 1 178 CYS 178 177 177 CYS CYS A . n A 1 179 GLY 179 178 178 GLY GLY A . n A 1 180 GLU 180 179 179 GLU GLU A . n A 1 181 TYR 181 180 180 TYR TYR A . n A 1 182 THR 182 181 181 THR THR A . n A 1 183 TYR 183 182 182 TYR TYR A . n A 1 184 GLU 184 183 183 GLU GLU A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 LYS 188 187 187 LYS LYS A . n A 1 189 LEU 189 188 188 LEU LEU A . n A 1 190 LEU 190 189 189 LEU LEU A . n A 1 191 ASN 191 190 190 ASN ASN A . n A 1 192 GLY 192 191 191 GLY GLY A . n A 1 193 LYS 193 192 192 LYS LYS A . n A 1 194 PRO 194 193 193 PRO PRO A . n A 1 195 VAL 195 194 194 VAL VAL A . n A 1 196 CYS 196 195 195 CYS CYS A . n A 1 197 LYS 197 196 196 LYS LYS A . n A 1 198 PRO 198 197 197 PRO PRO A . n A 1 199 ASP 199 198 198 ASP ASP A . n A 1 200 TYR 200 199 199 TYR TYR A . n A 1 201 TYR 201 200 200 TYR TYR A . n A 1 202 GLY 202 201 201 GLY GLY A . n A 1 203 LYS 203 202 ? ? ? A . n A 1 204 LYS 204 203 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 300 300 ZN ZN A . C 2 ZN 1 301 301 ZN ZN A . D 2 ZN 1 302 1 ZN ZN A . E 2 ZN 1 303 2 ZN ZN A . F 2 ZN 1 304 3 ZN ZN A . G 3 UNL 1 400 400 UNL UNL A . H 4 EDO 1 401 4 EDO EDO A . I 4 EDO 1 402 5 EDO EDO A . J 4 EDO 1 403 6 EDO EDO A . K 4 EDO 1 404 7 EDO EDO A . L 4 EDO 1 405 8 EDO EDO A . M 4 EDO 1 406 9 EDO EDO A . N 5 ACY 1 407 10 ACY ACY A . O 5 ACY 1 408 11 ACY ACY A . P 5 ACY 1 409 12 ACY ACY A . Q 5 ACY 1 410 13 ACY ACY A . R 5 ACY 1 411 14 ACY ACY A . S 5 ACY 1 412 15 ACY ACY A . T 5 ACY 1 413 16 ACY ACY A . U 5 ACY 1 414 17 ACY ACY A . V 6 HOH 1 415 18 HOH HOH A . V 6 HOH 2 416 19 HOH HOH A . V 6 HOH 3 417 20 HOH HOH A . V 6 HOH 4 418 21 HOH HOH A . V 6 HOH 5 419 22 HOH HOH A . V 6 HOH 6 420 23 HOH HOH A . V 6 HOH 7 421 24 HOH HOH A . V 6 HOH 8 422 25 HOH HOH A . V 6 HOH 9 423 26 HOH HOH A . V 6 HOH 10 424 27 HOH HOH A . V 6 HOH 11 425 28 HOH HOH A . V 6 HOH 12 426 29 HOH HOH A . V 6 HOH 13 427 30 HOH HOH A . V 6 HOH 14 428 31 HOH HOH A . V 6 HOH 15 429 32 HOH HOH A . V 6 HOH 16 430 33 HOH HOH A . V 6 HOH 17 431 34 HOH HOH A . V 6 HOH 18 432 35 HOH HOH A . V 6 HOH 19 433 36 HOH HOH A . V 6 HOH 20 434 37 HOH HOH A . V 6 HOH 21 435 38 HOH HOH A . V 6 HOH 22 436 39 HOH HOH A . V 6 HOH 23 437 40 HOH HOH A . V 6 HOH 24 438 41 HOH HOH A . V 6 HOH 25 439 42 HOH HOH A . V 6 HOH 26 440 43 HOH HOH A . V 6 HOH 27 441 44 HOH HOH A . V 6 HOH 28 442 45 HOH HOH A . V 6 HOH 29 443 46 HOH HOH A . V 6 HOH 30 444 47 HOH HOH A . V 6 HOH 31 445 48 HOH HOH A . V 6 HOH 32 446 49 HOH HOH A . V 6 HOH 33 447 50 HOH HOH A . V 6 HOH 34 448 51 HOH HOH A . V 6 HOH 35 449 52 HOH HOH A . V 6 HOH 36 450 53 HOH HOH A . V 6 HOH 37 451 54 HOH HOH A . V 6 HOH 38 452 55 HOH HOH A . V 6 HOH 39 453 56 HOH HOH A . V 6 HOH 40 454 57 HOH HOH A . V 6 HOH 41 455 58 HOH HOH A . V 6 HOH 42 456 59 HOH HOH A . V 6 HOH 43 457 60 HOH HOH A . V 6 HOH 44 458 61 HOH HOH A . V 6 HOH 45 459 62 HOH HOH A . V 6 HOH 46 460 63 HOH HOH A . V 6 HOH 47 461 64 HOH HOH A . V 6 HOH 48 462 65 HOH HOH A . V 6 HOH 49 463 66 HOH HOH A . V 6 HOH 50 464 67 HOH HOH A . V 6 HOH 51 465 68 HOH HOH A . V 6 HOH 52 466 69 HOH HOH A . V 6 HOH 53 467 70 HOH HOH A . V 6 HOH 54 468 71 HOH HOH A . V 6 HOH 55 469 72 HOH HOH A . V 6 HOH 56 470 73 HOH HOH A . V 6 HOH 57 471 74 HOH HOH A . V 6 HOH 58 472 75 HOH HOH A . V 6 HOH 59 473 76 HOH HOH A . V 6 HOH 60 474 77 HOH HOH A . V 6 HOH 61 475 78 HOH HOH A . V 6 HOH 62 476 79 HOH HOH A . V 6 HOH 63 477 80 HOH HOH A . V 6 HOH 64 478 81 HOH HOH A . V 6 HOH 65 479 82 HOH HOH A . V 6 HOH 66 480 83 HOH HOH A . V 6 HOH 67 481 84 HOH HOH A . V 6 HOH 68 482 85 HOH HOH A . V 6 HOH 69 483 86 HOH HOH A . V 6 HOH 70 484 87 HOH HOH A . V 6 HOH 71 485 88 HOH HOH A . V 6 HOH 72 486 89 HOH HOH A . V 6 HOH 73 487 90 HOH HOH A . V 6 HOH 74 488 91 HOH HOH A . V 6 HOH 75 489 92 HOH HOH A . V 6 HOH 76 490 93 HOH HOH A . V 6 HOH 77 491 94 HOH HOH A . V 6 HOH 78 492 95 HOH HOH A . V 6 HOH 79 493 96 HOH HOH A . V 6 HOH 80 494 97 HOH HOH A . V 6 HOH 81 495 98 HOH HOH A . V 6 HOH 82 496 99 HOH HOH A . V 6 HOH 83 497 100 HOH HOH A . V 6 HOH 84 498 101 HOH HOH A . V 6 HOH 85 499 102 HOH HOH A . V 6 HOH 86 500 103 HOH HOH A . V 6 HOH 87 501 104 HOH HOH A . V 6 HOH 88 502 105 HOH HOH A . V 6 HOH 89 503 106 HOH HOH A . V 6 HOH 90 504 107 HOH HOH A . V 6 HOH 91 505 108 HOH HOH A . V 6 HOH 92 506 109 HOH HOH A . V 6 HOH 93 507 110 HOH HOH A . V 6 HOH 94 508 111 HOH HOH A . V 6 HOH 95 509 112 HOH HOH A . V 6 HOH 96 510 113 HOH HOH A . V 6 HOH 97 511 114 HOH HOH A . V 6 HOH 98 512 115 HOH HOH A . V 6 HOH 99 513 116 HOH HOH A . V 6 HOH 100 514 117 HOH HOH A . V 6 HOH 101 515 118 HOH HOH A . V 6 HOH 102 516 119 HOH HOH A . V 6 HOH 103 517 120 HOH HOH A . V 6 HOH 104 518 121 HOH HOH A . V 6 HOH 105 519 122 HOH HOH A . V 6 HOH 106 520 123 HOH HOH A . V 6 HOH 107 521 124 HOH HOH A . V 6 HOH 108 522 125 HOH HOH A . V 6 HOH 109 523 126 HOH HOH A . V 6 HOH 110 524 127 HOH HOH A . V 6 HOH 111 525 128 HOH HOH A . V 6 HOH 112 526 129 HOH HOH A . V 6 HOH 113 527 130 HOH HOH A . V 6 HOH 114 528 131 HOH HOH A . V 6 HOH 115 529 132 HOH HOH A . V 6 HOH 116 530 133 HOH HOH A . V 6 HOH 117 531 134 HOH HOH A . V 6 HOH 118 532 135 HOH HOH A . V 6 HOH 119 533 136 HOH HOH A . V 6 HOH 120 534 137 HOH HOH A . V 6 HOH 121 535 138 HOH HOH A . V 6 HOH 122 536 139 HOH HOH A . V 6 HOH 123 537 140 HOH HOH A . V 6 HOH 124 538 141 HOH HOH A . V 6 HOH 125 539 142 HOH HOH A . V 6 HOH 126 540 143 HOH HOH A . V 6 HOH 127 541 144 HOH HOH A . V 6 HOH 128 542 145 HOH HOH A . V 6 HOH 129 543 146 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 24 A MSE 23 ? MET SELENOMETHIONINE 3 A MSE 26 A MSE 25 ? MET SELENOMETHIONINE 4 A MSE 54 A MSE 53 ? MET SELENOMETHIONINE 5 A MSE 59 A MSE 58 ? MET SELENOMETHIONINE 6 A MSE 109 A MSE 108 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PQS tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 2 1,3,2,4 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9850 ? 1 MORE -258 ? 1 'SSA (A^2)' 17700 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 78.6800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 78.6800000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 542 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id V _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 17 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 NE2 ? A HIS 19 ? A HIS 18 ? 1_555 92.9 ? 2 NE2 ? A HIS 17 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 SG ? A CYS 21 ? A CYS 20 ? 1_555 112.2 ? 3 NE2 ? A HIS 19 ? A HIS 18 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 SG ? A CYS 21 ? A CYS 20 ? 1_555 121.6 ? 4 NE2 ? A HIS 17 ? A HIS 16 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 SG ? A CYS 62 ? A CYS 61 ? 1_555 88.4 ? 5 NE2 ? A HIS 19 ? A HIS 18 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 SG ? A CYS 62 ? A CYS 61 ? 1_555 123.7 ? 6 SG ? A CYS 21 ? A CYS 20 ? 1_555 ZN ? B ZN . ? A ZN 300 ? 1_555 SG ? A CYS 62 ? A CYS 61 ? 1_555 109.4 ? 7 ND1 ? A HIS 103 ? A HIS 102 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 OE1 ? A GLU 154 ? A GLU 153 ? 1_555 106.6 ? 8 ND1 ? A HIS 103 ? A HIS 102 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 OXT ? Q ACY . ? A ACY 410 ? 1_555 99.9 ? 9 OE1 ? A GLU 154 ? A GLU 153 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 OXT ? Q ACY . ? A ACY 410 ? 1_555 104.9 ? 10 ND1 ? A HIS 103 ? A HIS 102 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? Q ACY . ? A ACY 410 ? 1_555 118.5 ? 11 OE1 ? A GLU 154 ? A GLU 153 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? Q ACY . ? A ACY 410 ? 1_555 133.2 ? 12 OXT ? Q ACY . ? A ACY 410 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? Q ACY . ? A ACY 410 ? 1_555 57.4 ? 13 ND1 ? A HIS 103 ? A HIS 102 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? V HOH . ? A HOH 472 ? 1_555 98.3 ? 14 OE1 ? A GLU 154 ? A GLU 153 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? V HOH . ? A HOH 472 ? 1_555 107.2 ? 15 OXT ? Q ACY . ? A ACY 410 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? V HOH . ? A HOH 472 ? 1_555 136.3 ? 16 O ? Q ACY . ? A ACY 410 ? 1_555 ZN ? D ZN . ? A ZN 302 ? 1_555 O ? V HOH . ? A HOH 472 ? 1_555 79.0 ? 17 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 OD1 ? A ASP 118 ? A ASP 117 ? 1_555 51.3 ? 18 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 OE2 ? A GLU 157 ? A GLU 156 ? 6_554 98.3 ? 19 OD1 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 OE2 ? A GLU 157 ? A GLU 156 ? 6_554 83.4 ? 20 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O1 ? M EDO . ? A EDO 406 ? 1_555 109.5 ? 21 OD1 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O1 ? M EDO . ? A EDO 406 ? 1_555 96.9 ? 22 OE2 ? A GLU 157 ? A GLU 156 ? 6_554 ZN ? F ZN . ? A ZN 304 ? 1_555 O1 ? M EDO . ? A EDO 406 ? 1_555 144.6 ? 23 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O2 ? M EDO . ? A EDO 406 ? 1_555 125.4 ? 24 OD1 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O2 ? M EDO . ? A EDO 406 ? 1_555 74.1 ? 25 OE2 ? A GLU 157 ? A GLU 156 ? 6_554 ZN ? F ZN . ? A ZN 304 ? 1_555 O2 ? M EDO . ? A EDO 406 ? 1_555 75.1 ? 26 O1 ? M EDO . ? A EDO 406 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O2 ? M EDO . ? A EDO 406 ? 1_555 71.1 ? 27 OD2 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O ? V HOH . ? A HOH 513 ? 1_555 76.6 ? 28 OD1 ? A ASP 118 ? A ASP 117 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O ? V HOH . ? A HOH 513 ? 1_555 127.3 ? 29 OE2 ? A GLU 157 ? A GLU 156 ? 6_554 ZN ? F ZN . ? A ZN 304 ? 1_555 O ? V HOH . ? A HOH 513 ? 1_555 98.6 ? 30 O1 ? M EDO . ? A EDO 406 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O ? V HOH . ? A HOH 513 ? 1_555 108.7 ? 31 O2 ? M EDO . ? A EDO 406 ? 1_555 ZN ? F ZN . ? A ZN 304 ? 1_555 O ? V HOH . ? A HOH 513 ? 1_555 157.5 ? 32 OE2 ? A GLU 131 ? A GLU 130 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 OE2 ? A GLU 150 ? A GLU 149 ? 6_554 100.8 ? 33 OE2 ? A GLU 131 ? A GLU 130 ? 1_555 ZN ? E ZN . ? A ZN 303 ? 1_555 O ? R ACY . ? A ACY 411 ? 1_555 116.9 ? 34 OE2 ? A GLU 150 ? A GLU 149 ? 6_554 ZN ? E ZN . ? A ZN 303 ? 1_555 O ? R ACY . ? A ACY 411 ? 1_555 98.6 ? 35 SG ? A CYS 175 ? A CYS 174 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 178 ? A CYS 177 ? 1_555 107.2 ? 36 SG ? A CYS 175 ? A CYS 174 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 196 ? A CYS 195 ? 1_555 114.5 ? 37 SG ? A CYS 178 ? A CYS 177 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 196 ? A CYS 195 ? 1_555 121.4 ? 38 SG ? A CYS 175 ? A CYS 174 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 199 ? A ASP 198 ? 1_555 110.2 ? 39 SG ? A CYS 178 ? A CYS 177 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 199 ? A ASP 198 ? 1_555 102.4 ? 40 SG ? A CYS 196 ? A CYS 195 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 OD2 ? A ASP 199 ? A ASP 198 ? 1_555 99.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-13 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-10-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_struct_conn_angle 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_conn_type 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 5 'Structure model' '_pdbx_struct_conn_angle.value' 20 5 'Structure model' '_struct_conn.conn_type_id' 21 5 'Structure model' '_struct_conn.id' 22 5 'Structure model' '_struct_conn.pdbx_dist_value' 23 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 5 'Structure model' '_struct_conn.ptnr1_symmetry' 31 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_symmetry' 38 5 'Structure model' '_struct_conn_type.id' 39 5 'Structure model' '_struct_ref_seq_dif.details' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 33.8420 _pdbx_refine_tls.origin_y 19.9400 _pdbx_refine_tls.origin_z 4.0830 _pdbx_refine_tls.T[1][1] -0.1532 _pdbx_refine_tls.T[2][2] -0.1698 _pdbx_refine_tls.T[3][3] -0.1275 _pdbx_refine_tls.T[1][2] 0.0103 _pdbx_refine_tls.T[1][3] -0.0024 _pdbx_refine_tls.T[2][3] -0.0107 _pdbx_refine_tls.L[1][1] 1.5761 _pdbx_refine_tls.L[2][2] 0.5735 _pdbx_refine_tls.L[3][3] 0.7577 _pdbx_refine_tls.L[1][2] -0.5123 _pdbx_refine_tls.L[1][3] -0.5528 _pdbx_refine_tls.L[2][3] 0.1213 _pdbx_refine_tls.S[1][1] -0.0546 _pdbx_refine_tls.S[2][2] 0.0476 _pdbx_refine_tls.S[3][3] 0.0070 _pdbx_refine_tls.S[1][2] -0.0905 _pdbx_refine_tls.S[1][3] 0.1003 _pdbx_refine_tls.S[2][3] -0.0118 _pdbx_refine_tls.S[2][1] 0.0103 _pdbx_refine_tls.S[3][1] -0.1010 _pdbx_refine_tls.S[3][2] -0.0208 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id C _pdbx_refine_tls_group.end_label_seq_id 1 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 301 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD+MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 XSCALE . ? program 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 2 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 XDS . ? ? ? ? 'data reduction' ? ? ? 4 SHELXD . ? ? ? ? phasing ? ? ? 5 autoSHARP . ? ? ? ? phasing ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? 7 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG: MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 108 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 108 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.593 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.357 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 122 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 122 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 122 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.70 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.40 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 2 ? ? -167.79 87.99 2 1 ASP A 44 ? ? -128.97 -126.33 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MSE 1 ? CG ? A MSE 2 CG 2 1 Y 1 A MSE 1 ? SE ? A MSE 2 SE 3 1 Y 1 A MSE 1 ? CE ? A MSE 2 CE 4 1 Y 1 A GLU 2 ? CG ? A GLU 3 CG 5 1 Y 1 A GLU 2 ? CD ? A GLU 3 CD 6 1 Y 1 A GLU 2 ? OE1 ? A GLU 3 OE1 7 1 Y 1 A GLU 2 ? OE2 ? A GLU 3 OE2 8 1 Y 1 A LYS 3 ? CD ? A LYS 4 CD 9 1 Y 1 A LYS 3 ? CE ? A LYS 4 CE 10 1 Y 1 A LYS 3 ? NZ ? A LYS 4 NZ 11 1 Y 1 A GLU 10 ? CD ? A GLU 11 CD 12 1 Y 1 A GLU 10 ? OE1 ? A GLU 11 OE1 13 1 Y 1 A GLU 10 ? OE2 ? A GLU 11 OE2 14 1 Y 1 A LYS 35 ? CE ? A LYS 36 CE 15 1 Y 1 A LYS 35 ? NZ ? A LYS 36 NZ 16 1 Y 1 A ARG 155 ? NE ? A ARG 156 NE 17 1 Y 1 A ARG 155 ? CZ ? A ARG 156 CZ 18 1 Y 1 A ARG 155 ? NH1 ? A ARG 156 NH1 19 1 Y 1 A ARG 155 ? NH2 ? A ARG 156 NH2 20 1 Y 1 A GLU 163 ? CD ? A GLU 164 CD 21 1 Y 1 A GLU 163 ? OE1 ? A GLU 164 OE1 22 1 Y 1 A GLU 163 ? OE2 ? A GLU 164 OE2 23 1 Y 1 A LYS 192 ? NZ ? A LYS 193 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A LYS 202 ? A LYS 203 3 1 Y 1 A LYS 203 ? A LYS 204 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'UNKNOWN LIGAND' UNL 4 1,2-ETHANEDIOL EDO 5 'ACETIC ACID' ACY 6 water HOH #