data_2GXB # _entry.id 2GXB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2GXB pdb_00002gxb 10.2210/pdb2gxb/pdb NDB PR0210 ? ? RCSB RCSB037662 ? ? WWPDB D_1000037662 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1QBJ 'Za/Z-DNA complex' unspecified PDB 1XMK 'Zb domain' unspecified PDB 1QJP 'NMR structure of Za' unspecified # _pdbx_database_status.entry_id 2GXB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-05-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Athanasiadis, A.' 1 'Placido, D.' 2 'Rich, A.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'A Left-Handed RNA Double Helix Bound by the Zalpha Domain of the RNA-Editing Enzyme ADAR1.' Structure 15 395 404 2007 STRUE6 UK 0969-2126 2005 ? 17437712 10.1016/j.str.2007.03.001 1 'Crystal structure of the Zalpha domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA.' Science 284 1841 1845 1999 SCIEAS US 0036-8075 0038 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Placido, D.' 1 ? primary 'Brown, B.A.' 2 ? primary 'Lowenhaupt, K.' 3 ? primary 'Rich, A.' 4 ? primary 'Athanasiadis, A.' 5 ? # _cell.entry_id 2GXB _cell.length_a 73.603 _cell.length_b 92.776 _cell.length_c 50.229 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2GXB _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(P*(DU)P*CP*GP*CP*GP*CP*G)-3'" 2196.372 2 ? ? ? ? 2 polymer man 'Double-stranded RNA-specific adenosine deaminase' 7315.534 2 3.5.4.- ? 'Za Domain' ? 3 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 4 water nat water 18.015 157 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'DRADA, 136 kDa double-stranded RNA-binding protein, P136, K88DSRBP, Interferon-inducible protein 4, IFI-4 protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no '(DU)CGCGCG' UCGCGCG E,F ? 2 'polypeptide(L)' no no SHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ SHMEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DU n 1 2 C n 1 3 G n 1 4 C n 1 5 G n 1 6 C n 1 7 G n 2 1 SER n 2 2 HIS n 2 3 MET n 2 4 GLU n 2 5 GLN n 2 6 ARG n 2 7 ILE n 2 8 LEU n 2 9 LYS n 2 10 PHE n 2 11 LEU n 2 12 GLU n 2 13 GLU n 2 14 LEU n 2 15 GLY n 2 16 GLU n 2 17 GLY n 2 18 LYS n 2 19 ALA n 2 20 THR n 2 21 THR n 2 22 ALA n 2 23 HIS n 2 24 ASP n 2 25 LEU n 2 26 SER n 2 27 GLY n 2 28 LYS n 2 29 LEU n 2 30 GLY n 2 31 THR n 2 32 PRO n 2 33 LYS n 2 34 LYS n 2 35 GLU n 2 36 ILE n 2 37 ASN n 2 38 ARG n 2 39 VAL n 2 40 LEU n 2 41 TYR n 2 42 SER n 2 43 LEU n 2 44 ALA n 2 45 LYS n 2 46 LYS n 2 47 GLY n 2 48 LYS n 2 49 LEU n 2 50 GLN n 2 51 LYS n 2 52 GLU n 2 53 ALA n 2 54 GLY n 2 55 THR n 2 56 PRO n 2 57 PRO n 2 58 LEU n 2 59 TRP n 2 60 LYS n 2 61 ILE n 2 62 ALA n 2 63 VAL n 2 64 SER n 2 65 THR n 2 66 GLN n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ADAR, ADAR1, DSRAD, IFI4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DSRAD_HUMAN P55265 2 EQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQ 140 ? 2 PDB 2GXB 2GXB 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2GXB A 4 ? 66 ? P55265 140 ? 202 ? 140 202 2 1 2GXB B 4 ? 66 ? P55265 140 ? 202 ? 140 202 3 2 2GXB E 1 ? 7 ? 2GXB 0 ? 6 ? 0 6 4 2 2GXB F 1 ? 7 ? 2GXB 0 ? 6 ? 0 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2GXB SER A 1 ? UNP P55265 ? ? 'cloning artifact' 137 1 1 2GXB HIS A 2 ? UNP P55265 ? ? 'cloning artifact' 138 2 1 2GXB MET A 3 ? UNP P55265 ? ? 'cloning artifact' 139 3 2 2GXB SER B 1 ? UNP P55265 ? ? 'cloning artifact' 137 4 2 2GXB HIS B 2 ? UNP P55265 ? ? 'cloning artifact' 138 5 2 2GXB MET B 3 ? UNP P55265 ? ? 'cloning artifact' 139 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2GXB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.6 _exptl_crystal_grow.pdbx_details '40% PEG600, 100mM Sodium Acetate, pH 3.6, VAPOR DIFFUSION, HANGING DROP, temperature 292K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 PEG600 ? ? ? 1 2 1 'Sodium Acetate' ? ? ? 1 3 1 H2O ? ? ? 1 4 2 PEG600 ? ? ? 1 5 2 'Sodium Acetate' ? ? ? 1 6 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-10-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97 # _reflns.entry_id 2GXB _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 25.00 _reflns.d_resolution_high 2.25 _reflns.number_obs 7511 _reflns.number_all ? _reflns.percent_possible_obs 90.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.075 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.308 _reflns_shell.percent_possible_all 92.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.197 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2GXB _refine.ls_number_reflns_obs 6769 _refine.ls_number_reflns_all 7499 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 88.47 _refine.ls_R_factor_obs 0.19908 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19436 _refine.ls_R_factor_R_free 0.24392 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.7 _refine.ls_number_reflns_R_free 730 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.B_iso_mean 19.895 _refine.aniso_B[1][1] -0.93 _refine.aniso_B[2][2] -1.01 _refine.aniso_B[3][3] 1.95 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry: 1QBJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.522 _refine.pdbx_overall_ESU_R_Free 0.270 _refine.overall_SU_ML 0.161 _refine.overall_SU_B 6.377 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 968 _refine_hist.pdbx_number_atoms_nucleic_acid 277 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 157 _refine_hist.number_atoms_total 1405 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1291 'X-RAY DIFFRACTION' ? r_bond_other_d 0.000 0.020 ? 1055 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.198 2.272 ? 1792 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.783 3.000 ? 2512 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.848 5.000 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.482 24.848 ? 33 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.361 15.000 ? 205 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25.514 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.053 0.200 ? 213 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1170 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 167 'X-RAY DIFFRACTION' ? r_nbd_refined 0.210 0.200 ? 264 'X-RAY DIFFRACTION' ? r_nbd_other 0.209 0.200 ? 911 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.185 0.200 ? 537 'X-RAY DIFFRACTION' ? r_nbtor_other 0.099 0.200 ? 590 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.188 0.200 ? 94 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.094 0.200 ? 4 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.256 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.233 0.200 ? 50 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.101 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.705 1.500 ? 617 'X-RAY DIFFRACTION' ? r_mcbond_other 0.025 1.500 ? 260 'X-RAY DIFFRACTION' ? r_mcangle_it 1.360 2.000 ? 983 'X-RAY DIFFRACTION' ? r_scbond_it 1.868 3.000 ? 731 'X-RAY DIFFRACTION' ? r_scangle_it 2.985 4.500 ? 809 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.250 _refine_ls_shell.d_res_low 2.308 _refine_ls_shell.number_reflns_R_work 501 _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.percent_reflns_obs 90.91 _refine_ls_shell.R_factor_R_free 0.364 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2GXB _struct.title 'Crystal Structure of The Za Domain bound to Z-RNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GXB _struct_keywords.pdbx_keywords hydrolase/RNA _struct_keywords.text 'Z-RNA, Za, ADAR1, RNA editing, PROTEIN-RNA complex, hydrolase-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER C 1 ? GLY C 15 ? SER A 137 GLY A 151 1 ? 15 HELX_P HELX_P2 2 THR C 21 ? GLY C 30 ? THR A 157 GLY A 166 1 ? 10 HELX_P HELX_P3 3 PRO C 32 ? LYS C 46 ? PRO A 168 LYS A 182 1 ? 15 HELX_P HELX_P4 4 MET D 3 ? LEU D 14 ? MET B 139 LEU B 150 1 ? 12 HELX_P HELX_P5 5 THR D 21 ? GLY D 30 ? THR B 157 GLY B 166 1 ? 10 HELX_P HELX_P6 6 PRO D 32 ? LYS D 46 ? PRO B 168 LYS B 182 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A C 4 "O2'" ? ? ? 1_555 F NA . NA ? ? E C 3 F NA 163 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc2 metalc ? ? A C 4 O2 ? ? ? 1_555 F NA . NA ? ? E C 3 F NA 163 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc3 metalc ? ? A C 6 "O2'" ? ? ? 1_555 E NA . NA ? ? E C 5 E NA 162 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc4 metalc ? ? A C 6 O2 ? ? ? 1_555 E NA . NA ? ? E C 5 E NA 162 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc5 metalc ? ? H HOH . O ? ? ? 1_555 E NA . NA ? ? E HOH 61 E NA 162 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 B C 4 "O2'" ? ? E NA 162 F C 3 1_555 ? ? ? ? ? ? ? 2.452 ? ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 B C 4 O2 ? ? E NA 162 F C 3 1_555 ? ? ? ? ? ? ? 2.628 ? ? metalc8 metalc ? ? B C 4 OP1 ? ? ? 1_555 G NA . NA ? ? F C 3 B NA 203 1_555 ? ? ? ? ? ? ? 2.552 ? ? metalc9 metalc ? ? B C 6 "O2'" ? ? ? 1_555 F NA . NA ? ? F C 5 F NA 163 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc10 metalc ? ? B C 6 O2 ? ? ? 1_555 F NA . NA ? ? F C 5 F NA 163 1_555 ? ? ? ? ? ? ? 2.469 ? ? metalc11 metalc ? ? F NA . NA ? ? ? 1_555 I HOH . O ? ? F NA 163 F HOH 189 1_555 ? ? ? ? ? ? ? 2.739 ? ? metalc12 metalc ? ? D ASN 37 OD1 ? ? ? 1_555 G NA . NA ? ? B ASN 173 B NA 203 1_555 ? ? ? ? ? ? ? 2.880 ? ? metalc13 metalc ? ? G NA . NA ? ? ? 1_555 K HOH . O ? ? B NA 203 B HOH 211 1_555 ? ? ? ? ? ? ? 2.777 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 7 N1 ? ? E C 1 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 7 O6 ? ? E C 1 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 7 N2 ? ? E C 1 F G 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 6 N3 ? ? E G 2 F C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 6 O2 ? ? E G 2 F C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 6 N4 ? ? E G 2 F C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 5 N1 ? ? E C 3 F G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 5 O6 ? ? E C 3 F G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 5 N2 ? ? E C 3 F G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 4 N3 ? ? E G 4 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 4 O2 ? ? E G 4 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 4 N4 ? ? E G 4 F C 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 3 N1 ? ? E C 5 F G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 3 O6 ? ? E C 5 F G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 3 N2 ? ? E C 5 F G 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 B C 2 N3 ? ? E G 6 F C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 B C 2 O2 ? ? E G 6 F C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 B C 2 N4 ? ? E G 6 F C 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 55 C . ? THR 191 A PRO 56 C ? PRO 192 A 1 2.84 2 THR 55 D . ? THR 191 B PRO 56 D ? PRO 192 B 1 -10.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU C 49 ? GLU C 52 ? LEU A 185 GLU A 188 A 2 LEU C 58 ? ILE C 61 ? LEU A 194 ILE A 197 B 1 LEU D 49 ? LYS D 51 ? LEU B 185 LYS B 187 B 2 TRP D 59 ? ILE D 61 ? TRP B 195 ILE B 197 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU C 52 ? N GLU A 188 O LEU C 58 ? O LEU A 194 B 1 2 N GLN D 50 ? N GLN B 186 O LYS D 60 ? O LYS B 196 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B NA 203 ? 4 'BINDING SITE FOR RESIDUE NA B 203' AC2 Software E NA 162 ? 3 'BINDING SITE FOR RESIDUE NA E 162' AC3 Software F NA 163 ? 3 'BINDING SITE FOR RESIDUE NA F 163' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN D 37 ? ASN B 173 . ? 1_555 ? 2 AC1 4 TRP D 59 ? TRP B 195 . ? 1_555 ? 3 AC1 4 HOH K . ? HOH B 211 . ? 1_555 ? 4 AC1 4 C B 4 ? C F 3 . ? 1_555 ? 5 AC2 3 C A 6 ? C E 5 . ? 1_555 ? 6 AC2 3 HOH H . ? HOH E 61 . ? 1_555 ? 7 AC2 3 C B 4 ? C F 3 . ? 1_555 ? 8 AC3 3 C A 4 ? C E 3 . ? 1_555 ? 9 AC3 3 C B 6 ? C F 5 . ? 1_555 ? 10 AC3 3 HOH I . ? HOH F 189 . ? 1_555 ? # _atom_sites.entry_id 2GXB _atom_sites.fract_transf_matrix[1][1] 0.013586 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010779 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019909 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DU 1 0 0 DU DU E . n A 1 2 C 2 1 1 C C E . n A 1 3 G 3 2 2 G G E . n A 1 4 C 4 3 3 C C E . n A 1 5 G 5 4 4 G G E . n A 1 6 C 6 5 5 C C E . n A 1 7 G 7 6 6 G G E . n B 1 1 DU 1 0 ? ? ? F . n B 1 2 C 2 1 1 C C F . n B 1 3 G 3 2 2 G G F . n B 1 4 C 4 3 3 C C F . n B 1 5 G 5 4 4 G G F . n B 1 6 C 6 5 5 C C F . n B 1 7 G 7 6 6 G G F . n C 2 1 SER 1 137 137 SER SER A . n C 2 2 HIS 2 138 138 HIS HIS A . n C 2 3 MET 3 139 139 MET MET A . n C 2 4 GLU 4 140 140 GLU GLU A . n C 2 5 GLN 5 141 141 GLN GLN A . n C 2 6 ARG 6 142 142 ARG ARG A . n C 2 7 ILE 7 143 143 ILE ILE A . n C 2 8 LEU 8 144 144 LEU LEU A . n C 2 9 LYS 9 145 145 LYS LYS A . n C 2 10 PHE 10 146 146 PHE PHE A . n C 2 11 LEU 11 147 147 LEU LEU A . n C 2 12 GLU 12 148 148 GLU GLU A . n C 2 13 GLU 13 149 149 GLU GLU A . n C 2 14 LEU 14 150 150 LEU LEU A . n C 2 15 GLY 15 151 151 GLY GLY A . n C 2 16 GLU 16 152 152 GLU GLU A . n C 2 17 GLY 17 153 153 GLY GLY A . n C 2 18 LYS 18 154 154 LYS LYS A . n C 2 19 ALA 19 155 155 ALA ALA A . n C 2 20 THR 20 156 156 THR THR A . n C 2 21 THR 21 157 157 THR THR A . n C 2 22 ALA 22 158 158 ALA ALA A . n C 2 23 HIS 23 159 159 HIS HIS A . n C 2 24 ASP 24 160 160 ASP ASP A . n C 2 25 LEU 25 161 161 LEU LEU A . n C 2 26 SER 26 162 162 SER SER A . n C 2 27 GLY 27 163 163 GLY GLY A . n C 2 28 LYS 28 164 164 LYS LYS A . n C 2 29 LEU 29 165 165 LEU LEU A . n C 2 30 GLY 30 166 166 GLY GLY A . n C 2 31 THR 31 167 167 THR THR A . n C 2 32 PRO 32 168 168 PRO PRO A . n C 2 33 LYS 33 169 169 LYS LYS A . n C 2 34 LYS 34 170 170 LYS LYS A . n C 2 35 GLU 35 171 171 GLU GLU A . n C 2 36 ILE 36 172 172 ILE ILE A . n C 2 37 ASN 37 173 173 ASN ASN A . n C 2 38 ARG 38 174 174 ARG ARG A . n C 2 39 VAL 39 175 175 VAL VAL A . n C 2 40 LEU 40 176 176 LEU LEU A . n C 2 41 TYR 41 177 177 TYR TYR A . n C 2 42 SER 42 178 178 SER SER A . n C 2 43 LEU 43 179 179 LEU LEU A . n C 2 44 ALA 44 180 180 ALA ALA A . n C 2 45 LYS 45 181 181 LYS LYS A . n C 2 46 LYS 46 182 182 LYS LYS A . n C 2 47 GLY 47 183 183 GLY GLY A . n C 2 48 LYS 48 184 184 LYS LYS A . n C 2 49 LEU 49 185 185 LEU LEU A . n C 2 50 GLN 50 186 186 GLN GLN A . n C 2 51 LYS 51 187 187 LYS LYS A . n C 2 52 GLU 52 188 188 GLU GLU A . n C 2 53 ALA 53 189 189 ALA ALA A . n C 2 54 GLY 54 190 190 GLY GLY A . n C 2 55 THR 55 191 191 THR THR A . n C 2 56 PRO 56 192 192 PRO PRO A . n C 2 57 PRO 57 193 193 PRO PRO A . n C 2 58 LEU 58 194 194 LEU LEU A . n C 2 59 TRP 59 195 195 TRP TRP A . n C 2 60 LYS 60 196 196 LYS LYS A . n C 2 61 ILE 61 197 197 ILE ILE A . n C 2 62 ALA 62 198 198 ALA ALA A . n C 2 63 VAL 63 199 ? ? ? A . n C 2 64 SER 64 200 ? ? ? A . n C 2 65 THR 65 201 ? ? ? A . n C 2 66 GLN 66 202 ? ? ? A . n D 2 1 SER 1 137 ? ? ? B . n D 2 2 HIS 2 138 ? ? ? B . n D 2 3 MET 3 139 139 MET MET B . n D 2 4 GLU 4 140 140 GLU GLU B . n D 2 5 GLN 5 141 141 GLN GLN B . n D 2 6 ARG 6 142 142 ARG ARG B . n D 2 7 ILE 7 143 143 ILE ILE B . n D 2 8 LEU 8 144 144 LEU LEU B . n D 2 9 LYS 9 145 145 LYS LYS B . n D 2 10 PHE 10 146 146 PHE PHE B . n D 2 11 LEU 11 147 147 LEU LEU B . n D 2 12 GLU 12 148 148 GLU GLU B . n D 2 13 GLU 13 149 149 GLU GLU B . n D 2 14 LEU 14 150 150 LEU LEU B . n D 2 15 GLY 15 151 151 GLY GLY B . n D 2 16 GLU 16 152 152 GLU GLU B . n D 2 17 GLY 17 153 153 GLY GLY B . n D 2 18 LYS 18 154 154 LYS LYS B . n D 2 19 ALA 19 155 155 ALA ALA B . n D 2 20 THR 20 156 156 THR THR B . n D 2 21 THR 21 157 157 THR THR B . n D 2 22 ALA 22 158 158 ALA ALA B . n D 2 23 HIS 23 159 159 HIS HIS B . n D 2 24 ASP 24 160 160 ASP ASP B . n D 2 25 LEU 25 161 161 LEU LEU B . n D 2 26 SER 26 162 162 SER SER B . n D 2 27 GLY 27 163 163 GLY GLY B . n D 2 28 LYS 28 164 164 LYS LYS B . n D 2 29 LEU 29 165 165 LEU LEU B . n D 2 30 GLY 30 166 166 GLY GLY B . n D 2 31 THR 31 167 167 THR THR B . n D 2 32 PRO 32 168 168 PRO PRO B . n D 2 33 LYS 33 169 169 LYS LYS B . n D 2 34 LYS 34 170 170 LYS LYS B . n D 2 35 GLU 35 171 171 GLU GLU B . n D 2 36 ILE 36 172 172 ILE ILE B . n D 2 37 ASN 37 173 173 ASN ASN B . n D 2 38 ARG 38 174 174 ARG ARG B . n D 2 39 VAL 39 175 175 VAL VAL B . n D 2 40 LEU 40 176 176 LEU LEU B . n D 2 41 TYR 41 177 177 TYR TYR B . n D 2 42 SER 42 178 178 SER SER B . n D 2 43 LEU 43 179 179 LEU LEU B . n D 2 44 ALA 44 180 180 ALA ALA B . n D 2 45 LYS 45 181 181 LYS LYS B . n D 2 46 LYS 46 182 182 LYS LYS B . n D 2 47 GLY 47 183 183 GLY GLY B . n D 2 48 LYS 48 184 184 LYS LYS B . n D 2 49 LEU 49 185 185 LEU LEU B . n D 2 50 GLN 50 186 186 GLN GLN B . n D 2 51 LYS 51 187 187 LYS LYS B . n D 2 52 GLU 52 188 188 GLU GLU B . n D 2 53 ALA 53 189 189 ALA ALA B . n D 2 54 GLY 54 190 190 GLY GLY B . n D 2 55 THR 55 191 191 THR THR B . n D 2 56 PRO 56 192 192 PRO PRO B . n D 2 57 PRO 57 193 193 PRO PRO B . n D 2 58 LEU 58 194 194 LEU LEU B . n D 2 59 TRP 59 195 195 TRP TRP B . n D 2 60 LYS 60 196 196 LYS LYS B . n D 2 61 ILE 61 197 197 ILE ILE B . n D 2 62 ALA 62 198 198 ALA ALA B . n D 2 63 VAL 63 199 199 VAL VAL B . n D 2 64 SER 64 200 200 SER SER B . n D 2 65 THR 65 201 201 THR THR B . n D 2 66 GLN 66 202 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA 1 162 162 NA NA E . F 3 NA 1 163 163 NA NA F . G 3 NA 1 203 161 NA NA B . H 4 HOH 1 7 7 HOH HOH E . H 4 HOH 2 8 8 HOH HOH E . H 4 HOH 3 14 14 HOH HOH E . H 4 HOH 4 20 20 HOH HOH E . H 4 HOH 5 21 21 HOH HOH E . H 4 HOH 6 32 32 HOH HOH E . H 4 HOH 7 36 36 HOH HOH E . H 4 HOH 8 41 41 HOH HOH E . H 4 HOH 9 43 43 HOH HOH E . H 4 HOH 10 45 45 HOH HOH E . H 4 HOH 11 46 46 HOH HOH E . H 4 HOH 12 47 47 HOH HOH E . H 4 HOH 13 52 52 HOH HOH E . H 4 HOH 14 60 60 HOH HOH E . H 4 HOH 15 61 61 HOH HOH E . H 4 HOH 16 62 62 HOH HOH E . H 4 HOH 17 65 65 HOH HOH E . H 4 HOH 18 78 78 HOH HOH E . H 4 HOH 19 83 83 HOH HOH E . H 4 HOH 20 91 91 HOH HOH E . H 4 HOH 21 100 100 HOH HOH E . H 4 HOH 22 103 103 HOH HOH E . H 4 HOH 23 108 108 HOH HOH E . H 4 HOH 24 119 119 HOH HOH E . H 4 HOH 25 123 123 HOH HOH E . H 4 HOH 26 125 125 HOH HOH E . H 4 HOH 27 132 132 HOH HOH E . H 4 HOH 28 142 142 HOH HOH E . H 4 HOH 29 143 143 HOH HOH E . H 4 HOH 30 151 151 HOH HOH E . H 4 HOH 31 154 154 HOH HOH E . H 4 HOH 32 156 156 HOH HOH E . I 4 HOH 1 164 2 HOH HOH F . I 4 HOH 2 165 3 HOH HOH F . I 4 HOH 3 166 5 HOH HOH F . I 4 HOH 4 167 6 HOH HOH F . I 4 HOH 5 168 10 HOH HOH F . I 4 HOH 6 169 11 HOH HOH F . I 4 HOH 7 170 19 HOH HOH F . I 4 HOH 8 171 25 HOH HOH F . I 4 HOH 9 172 29 HOH HOH F . I 4 HOH 10 173 30 HOH HOH F . I 4 HOH 11 174 33 HOH HOH F . I 4 HOH 12 175 38 HOH HOH F . I 4 HOH 13 176 49 HOH HOH F . I 4 HOH 14 177 50 HOH HOH F . I 4 HOH 15 178 51 HOH HOH F . I 4 HOH 16 179 73 HOH HOH F . I 4 HOH 17 180 79 HOH HOH F . I 4 HOH 18 181 82 HOH HOH F . I 4 HOH 19 182 84 HOH HOH F . I 4 HOH 20 183 85 HOH HOH F . I 4 HOH 21 184 90 HOH HOH F . I 4 HOH 22 185 99 HOH HOH F . I 4 HOH 23 186 120 HOH HOH F . I 4 HOH 24 187 124 HOH HOH F . I 4 HOH 25 188 127 HOH HOH F . I 4 HOH 26 189 129 HOH HOH F . I 4 HOH 27 190 130 HOH HOH F . I 4 HOH 28 191 148 HOH HOH F . J 4 HOH 1 203 15 HOH HOH A . J 4 HOH 2 204 16 HOH HOH A . J 4 HOH 3 205 18 HOH HOH A . J 4 HOH 4 206 22 HOH HOH A . J 4 HOH 5 207 27 HOH HOH A . J 4 HOH 6 208 28 HOH HOH A . J 4 HOH 7 209 35 HOH HOH A . J 4 HOH 8 210 37 HOH HOH A . J 4 HOH 9 211 40 HOH HOH A . J 4 HOH 10 212 48 HOH HOH A . J 4 HOH 11 213 53 HOH HOH A . J 4 HOH 12 214 56 HOH HOH A . J 4 HOH 13 215 58 HOH HOH A . J 4 HOH 14 216 59 HOH HOH A . J 4 HOH 15 217 63 HOH HOH A . J 4 HOH 16 218 64 HOH HOH A . J 4 HOH 17 219 72 HOH HOH A . J 4 HOH 18 220 74 HOH HOH A . J 4 HOH 19 221 93 HOH HOH A . J 4 HOH 20 222 94 HOH HOH A . J 4 HOH 21 223 96 HOH HOH A . J 4 HOH 22 224 98 HOH HOH A . J 4 HOH 23 225 104 HOH HOH A . J 4 HOH 24 226 106 HOH HOH A . J 4 HOH 25 227 107 HOH HOH A . J 4 HOH 26 228 110 HOH HOH A . J 4 HOH 27 229 111 HOH HOH A . J 4 HOH 28 230 115 HOH HOH A . J 4 HOH 29 231 116 HOH HOH A . J 4 HOH 30 232 117 HOH HOH A . J 4 HOH 31 233 121 HOH HOH A . J 4 HOH 32 234 122 HOH HOH A . J 4 HOH 33 235 133 HOH HOH A . J 4 HOH 34 236 138 HOH HOH A . J 4 HOH 35 237 139 HOH HOH A . J 4 HOH 36 238 140 HOH HOH A . J 4 HOH 37 239 141 HOH HOH A . J 4 HOH 38 240 144 HOH HOH A . J 4 HOH 39 241 146 HOH HOH A . J 4 HOH 40 242 147 HOH HOH A . J 4 HOH 41 243 149 HOH HOH A . J 4 HOH 42 244 153 HOH HOH A . J 4 HOH 43 245 155 HOH HOH A . J 4 HOH 44 246 157 HOH HOH A . K 4 HOH 1 204 1 HOH HOH B . K 4 HOH 2 205 4 HOH HOH B . K 4 HOH 3 206 9 HOH HOH B . K 4 HOH 4 207 12 HOH HOH B . K 4 HOH 5 208 13 HOH HOH B . K 4 HOH 6 209 17 HOH HOH B . K 4 HOH 7 210 23 HOH HOH B . K 4 HOH 8 211 24 HOH HOH B . K 4 HOH 9 212 26 HOH HOH B . K 4 HOH 10 213 31 HOH HOH B . K 4 HOH 11 214 34 HOH HOH B . K 4 HOH 12 215 39 HOH HOH B . K 4 HOH 13 216 42 HOH HOH B . K 4 HOH 14 217 44 HOH HOH B . K 4 HOH 15 218 54 HOH HOH B . K 4 HOH 16 219 55 HOH HOH B . K 4 HOH 17 220 57 HOH HOH B . K 4 HOH 18 221 66 HOH HOH B . K 4 HOH 19 222 67 HOH HOH B . K 4 HOH 20 223 68 HOH HOH B . K 4 HOH 21 224 69 HOH HOH B . K 4 HOH 22 225 70 HOH HOH B . K 4 HOH 23 226 71 HOH HOH B . K 4 HOH 24 227 75 HOH HOH B . K 4 HOH 25 228 76 HOH HOH B . K 4 HOH 26 229 77 HOH HOH B . K 4 HOH 27 230 80 HOH HOH B . K 4 HOH 28 231 81 HOH HOH B . K 4 HOH 29 232 86 HOH HOH B . K 4 HOH 30 233 87 HOH HOH B . K 4 HOH 31 234 88 HOH HOH B . K 4 HOH 32 235 89 HOH HOH B . K 4 HOH 33 236 92 HOH HOH B . K 4 HOH 34 237 95 HOH HOH B . K 4 HOH 35 238 97 HOH HOH B . K 4 HOH 36 239 101 HOH HOH B . K 4 HOH 37 240 102 HOH HOH B . K 4 HOH 38 241 105 HOH HOH B . K 4 HOH 39 242 109 HOH HOH B . K 4 HOH 40 243 112 HOH HOH B . K 4 HOH 41 244 113 HOH HOH B . K 4 HOH 42 245 114 HOH HOH B . K 4 HOH 43 246 118 HOH HOH B . K 4 HOH 44 247 126 HOH HOH B . K 4 HOH 45 248 128 HOH HOH B . K 4 HOH 46 249 131 HOH HOH B . K 4 HOH 47 250 134 HOH HOH B . K 4 HOH 48 251 135 HOH HOH B . K 4 HOH 49 252 136 HOH HOH B . K 4 HOH 50 253 137 HOH HOH B . K 4 HOH 51 254 145 HOH HOH B . K 4 HOH 52 255 150 HOH HOH B . K 4 HOH 53 256 152 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 E HOH 142 ? H HOH . 2 1 F HOH 191 ? I HOH . 3 1 B HOH 221 ? K HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O2'" ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O2 ? A C 4 ? E C 3 ? 1_555 84.9 ? 2 "O2'" ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 "O2'" ? B C 6 ? F C 5 ? 1_555 173.4 ? 3 O2 ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 "O2'" ? B C 6 ? F C 5 ? 1_555 96.9 ? 4 "O2'" ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O2 ? B C 6 ? F C 5 ? 1_555 101.6 ? 5 O2 ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O2 ? B C 6 ? F C 5 ? 1_555 89.1 ? 6 "O2'" ? B C 6 ? F C 5 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O2 ? B C 6 ? F C 5 ? 1_555 84.8 ? 7 "O2'" ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O ? I HOH . ? F HOH 189 ? 1_555 93.7 ? 8 O2 ? A C 4 ? E C 3 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O ? I HOH . ? F HOH 189 ? 1_555 75.8 ? 9 "O2'" ? B C 6 ? F C 5 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O ? I HOH . ? F HOH 189 ? 1_555 80.6 ? 10 O2 ? B C 6 ? F C 5 ? 1_555 NA ? F NA . ? F NA 163 ? 1_555 O ? I HOH . ? F HOH 189 ? 1_555 157.5 ? 11 "O2'" ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O2 ? A C 6 ? E C 5 ? 1_555 84.9 ? 12 "O2'" ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O ? H HOH . ? E HOH 61 ? 1_555 85.0 ? 13 O2 ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O ? H HOH . ? E HOH 61 ? 1_555 141.6 ? 14 "O2'" ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 "O2'" ? B C 4 ? F C 3 ? 1_555 175.4 ? 15 O2 ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 "O2'" ? B C 4 ? F C 3 ? 1_555 95.6 ? 16 O ? H HOH . ? E HOH 61 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 "O2'" ? B C 4 ? F C 3 ? 1_555 91.8 ? 17 "O2'" ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O2 ? B C 4 ? F C 3 ? 1_555 100.0 ? 18 O2 ? A C 6 ? E C 5 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O2 ? B C 4 ? F C 3 ? 1_555 85.3 ? 19 O ? H HOH . ? E HOH 61 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O2 ? B C 4 ? F C 3 ? 1_555 133.0 ? 20 "O2'" ? B C 4 ? F C 3 ? 1_555 NA ? E NA . ? E NA 162 ? 1_555 O2 ? B C 4 ? F C 3 ? 1_555 84.6 ? 21 OP1 ? B C 4 ? F C 3 ? 1_555 NA ? G NA . ? B NA 203 ? 1_555 OD1 ? D ASN 37 ? B ASN 173 ? 1_555 86.6 ? 22 OP1 ? B C 4 ? F C 3 ? 1_555 NA ? G NA . ? B NA 203 ? 1_555 O ? K HOH . ? B HOH 211 ? 1_555 132.6 ? 23 OD1 ? D ASN 37 ? B ASN 173 ? 1_555 NA ? G NA . ? B NA 203 ? 1_555 O ? K HOH . ? B HOH 211 ? 1_555 120.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-01 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_ref_seq_dif.details' 37 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 2GXB _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 0.548 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.350 _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation ? _pdbx_phasing_MR.d_res_low_rotation ? _pdbx_phasing_MR.d_res_high_translation 4.000 _pdbx_phasing_MR.d_res_low_translation 15.000 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 1 EPMR . ? other 'Charles R' crk@agouron.com phasing http://www.msg.ucsf.edu/local/programs/epmr/epmr.html ? ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" E DU 0 ? ? "C4'" E DU 0 ? ? "C3'" E DU 0 ? ? 101.35 104.50 -3.15 0.40 N 2 1 "C1'" E DU 0 ? ? "O4'" E DU 0 ? ? "C4'" E DU 0 ? ? 99.42 110.10 -10.68 1.00 N 3 1 "O4'" E DU 0 ? ? "C1'" E DU 0 ? ? N1 E DU 0 ? ? 111.05 108.30 2.75 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 145 ? CG ? D LYS 9 CG 2 1 Y 1 B LYS 145 ? CD ? D LYS 9 CD 3 1 Y 1 B LYS 145 ? CE ? D LYS 9 CE 4 1 Y 1 B LYS 145 ? NZ ? D LYS 9 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 F DU 0 ? B DU 1 2 1 Y 1 A VAL 199 ? C VAL 63 3 1 Y 1 A SER 200 ? C SER 64 4 1 Y 1 A THR 201 ? C THR 65 5 1 Y 1 A GLN 202 ? C GLN 66 6 1 Y 1 B SER 137 ? D SER 1 7 1 Y 1 B HIS 138 ? D HIS 2 8 1 Y 1 B GLN 202 ? D GLN 66 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C OP3 O N N 74 C P P N N 75 C OP1 O N N 76 C OP2 O N N 77 C "O5'" O N N 78 C "C5'" C N N 79 C "C4'" C N R 80 C "O4'" O N N 81 C "C3'" C N S 82 C "O3'" O N N 83 C "C2'" C N R 84 C "O2'" O N N 85 C "C1'" C N R 86 C N1 N N N 87 C C2 C N N 88 C O2 O N N 89 C N3 N N N 90 C C4 C N N 91 C N4 N N N 92 C C5 C N N 93 C C6 C N N 94 C HOP3 H N N 95 C HOP2 H N N 96 C "H5'" H N N 97 C "H5''" H N N 98 C "H4'" H N N 99 C "H3'" H N N 100 C "HO3'" H N N 101 C "H2'" H N N 102 C "HO2'" H N N 103 C "H1'" H N N 104 C H41 H N N 105 C H42 H N N 106 C H5 H N N 107 C H6 H N N 108 DU OP3 O N N 109 DU P P N N 110 DU OP1 O N N 111 DU OP2 O N N 112 DU "O5'" O N N 113 DU "C5'" C N N 114 DU "C4'" C N R 115 DU "O4'" O N N 116 DU "C3'" C N S 117 DU "O3'" O N N 118 DU "C2'" C N N 119 DU "C1'" C N R 120 DU N1 N N N 121 DU C2 C N N 122 DU O2 O N N 123 DU N3 N N N 124 DU C4 C N N 125 DU O4 O N N 126 DU C5 C N N 127 DU C6 C N N 128 DU HOP3 H N N 129 DU HOP2 H N N 130 DU "H5'" H N N 131 DU "H5''" H N N 132 DU "H4'" H N N 133 DU "H3'" H N N 134 DU "HO3'" H N N 135 DU "H2'" H N N 136 DU "H2''" H N N 137 DU "H1'" H N N 138 DU H3 H N N 139 DU H5 H N N 140 DU H6 H N N 141 G OP3 O N N 142 G P P N N 143 G OP1 O N N 144 G OP2 O N N 145 G "O5'" O N N 146 G "C5'" C N N 147 G "C4'" C N R 148 G "O4'" O N N 149 G "C3'" C N S 150 G "O3'" O N N 151 G "C2'" C N R 152 G "O2'" O N N 153 G "C1'" C N R 154 G N9 N Y N 155 G C8 C Y N 156 G N7 N Y N 157 G C5 C Y N 158 G C6 C N N 159 G O6 O N N 160 G N1 N N N 161 G C2 C N N 162 G N2 N N N 163 G N3 N N N 164 G C4 C Y N 165 G HOP3 H N N 166 G HOP2 H N N 167 G "H5'" H N N 168 G "H5''" H N N 169 G "H4'" H N N 170 G "H3'" H N N 171 G "HO3'" H N N 172 G "H2'" H N N 173 G "HO2'" H N N 174 G "H1'" H N N 175 G H8 H N N 176 G H1 H N N 177 G H21 H N N 178 G H22 H N N 179 GLN N N N N 180 GLN CA C N S 181 GLN C C N N 182 GLN O O N N 183 GLN CB C N N 184 GLN CG C N N 185 GLN CD C N N 186 GLN OE1 O N N 187 GLN NE2 N N N 188 GLN OXT O N N 189 GLN H H N N 190 GLN H2 H N N 191 GLN HA H N N 192 GLN HB2 H N N 193 GLN HB3 H N N 194 GLN HG2 H N N 195 GLN HG3 H N N 196 GLN HE21 H N N 197 GLN HE22 H N N 198 GLN HXT H N N 199 GLU N N N N 200 GLU CA C N S 201 GLU C C N N 202 GLU O O N N 203 GLU CB C N N 204 GLU CG C N N 205 GLU CD C N N 206 GLU OE1 O N N 207 GLU OE2 O N N 208 GLU OXT O N N 209 GLU H H N N 210 GLU H2 H N N 211 GLU HA H N N 212 GLU HB2 H N N 213 GLU HB3 H N N 214 GLU HG2 H N N 215 GLU HG3 H N N 216 GLU HE2 H N N 217 GLU HXT H N N 218 GLY N N N N 219 GLY CA C N N 220 GLY C C N N 221 GLY O O N N 222 GLY OXT O N N 223 GLY H H N N 224 GLY H2 H N N 225 GLY HA2 H N N 226 GLY HA3 H N N 227 GLY HXT H N N 228 HIS N N N N 229 HIS CA C N S 230 HIS C C N N 231 HIS O O N N 232 HIS CB C N N 233 HIS CG C Y N 234 HIS ND1 N Y N 235 HIS CD2 C Y N 236 HIS CE1 C Y N 237 HIS NE2 N Y N 238 HIS OXT O N N 239 HIS H H N N 240 HIS H2 H N N 241 HIS HA H N N 242 HIS HB2 H N N 243 HIS HB3 H N N 244 HIS HD1 H N N 245 HIS HD2 H N N 246 HIS HE1 H N N 247 HIS HE2 H N N 248 HIS HXT H N N 249 HOH O O N N 250 HOH H1 H N N 251 HOH H2 H N N 252 ILE N N N N 253 ILE CA C N S 254 ILE C C N N 255 ILE O O N N 256 ILE CB C N S 257 ILE CG1 C N N 258 ILE CG2 C N N 259 ILE CD1 C N N 260 ILE OXT O N N 261 ILE H H N N 262 ILE H2 H N N 263 ILE HA H N N 264 ILE HB H N N 265 ILE HG12 H N N 266 ILE HG13 H N N 267 ILE HG21 H N N 268 ILE HG22 H N N 269 ILE HG23 H N N 270 ILE HD11 H N N 271 ILE HD12 H N N 272 ILE HD13 H N N 273 ILE HXT H N N 274 LEU N N N N 275 LEU CA C N S 276 LEU C C N N 277 LEU O O N N 278 LEU CB C N N 279 LEU CG C N N 280 LEU CD1 C N N 281 LEU CD2 C N N 282 LEU OXT O N N 283 LEU H H N N 284 LEU H2 H N N 285 LEU HA H N N 286 LEU HB2 H N N 287 LEU HB3 H N N 288 LEU HG H N N 289 LEU HD11 H N N 290 LEU HD12 H N N 291 LEU HD13 H N N 292 LEU HD21 H N N 293 LEU HD22 H N N 294 LEU HD23 H N N 295 LEU HXT H N N 296 LYS N N N N 297 LYS CA C N S 298 LYS C C N N 299 LYS O O N N 300 LYS CB C N N 301 LYS CG C N N 302 LYS CD C N N 303 LYS CE C N N 304 LYS NZ N N N 305 LYS OXT O N N 306 LYS H H N N 307 LYS H2 H N N 308 LYS HA H N N 309 LYS HB2 H N N 310 LYS HB3 H N N 311 LYS HG2 H N N 312 LYS HG3 H N N 313 LYS HD2 H N N 314 LYS HD3 H N N 315 LYS HE2 H N N 316 LYS HE3 H N N 317 LYS HZ1 H N N 318 LYS HZ2 H N N 319 LYS HZ3 H N N 320 LYS HXT H N N 321 MET N N N N 322 MET CA C N S 323 MET C C N N 324 MET O O N N 325 MET CB C N N 326 MET CG C N N 327 MET SD S N N 328 MET CE C N N 329 MET OXT O N N 330 MET H H N N 331 MET H2 H N N 332 MET HA H N N 333 MET HB2 H N N 334 MET HB3 H N N 335 MET HG2 H N N 336 MET HG3 H N N 337 MET HE1 H N N 338 MET HE2 H N N 339 MET HE3 H N N 340 MET HXT H N N 341 NA NA NA N N 342 PHE N N N N 343 PHE CA C N S 344 PHE C C N N 345 PHE O O N N 346 PHE CB C N N 347 PHE CG C Y N 348 PHE CD1 C Y N 349 PHE CD2 C Y N 350 PHE CE1 C Y N 351 PHE CE2 C Y N 352 PHE CZ C Y N 353 PHE OXT O N N 354 PHE H H N N 355 PHE H2 H N N 356 PHE HA H N N 357 PHE HB2 H N N 358 PHE HB3 H N N 359 PHE HD1 H N N 360 PHE HD2 H N N 361 PHE HE1 H N N 362 PHE HE2 H N N 363 PHE HZ H N N 364 PHE HXT H N N 365 PRO N N N N 366 PRO CA C N S 367 PRO C C N N 368 PRO O O N N 369 PRO CB C N N 370 PRO CG C N N 371 PRO CD C N N 372 PRO OXT O N N 373 PRO H H N N 374 PRO HA H N N 375 PRO HB2 H N N 376 PRO HB3 H N N 377 PRO HG2 H N N 378 PRO HG3 H N N 379 PRO HD2 H N N 380 PRO HD3 H N N 381 PRO HXT H N N 382 SER N N N N 383 SER CA C N S 384 SER C C N N 385 SER O O N N 386 SER CB C N N 387 SER OG O N N 388 SER OXT O N N 389 SER H H N N 390 SER H2 H N N 391 SER HA H N N 392 SER HB2 H N N 393 SER HB3 H N N 394 SER HG H N N 395 SER HXT H N N 396 THR N N N N 397 THR CA C N S 398 THR C C N N 399 THR O O N N 400 THR CB C N R 401 THR OG1 O N N 402 THR CG2 C N N 403 THR OXT O N N 404 THR H H N N 405 THR H2 H N N 406 THR HA H N N 407 THR HB H N N 408 THR HG1 H N N 409 THR HG21 H N N 410 THR HG22 H N N 411 THR HG23 H N N 412 THR HXT H N N 413 TRP N N N N 414 TRP CA C N S 415 TRP C C N N 416 TRP O O N N 417 TRP CB C N N 418 TRP CG C Y N 419 TRP CD1 C Y N 420 TRP CD2 C Y N 421 TRP NE1 N Y N 422 TRP CE2 C Y N 423 TRP CE3 C Y N 424 TRP CZ2 C Y N 425 TRP CZ3 C Y N 426 TRP CH2 C Y N 427 TRP OXT O N N 428 TRP H H N N 429 TRP H2 H N N 430 TRP HA H N N 431 TRP HB2 H N N 432 TRP HB3 H N N 433 TRP HD1 H N N 434 TRP HE1 H N N 435 TRP HE3 H N N 436 TRP HZ2 H N N 437 TRP HZ3 H N N 438 TRP HH2 H N N 439 TRP HXT H N N 440 TYR N N N N 441 TYR CA C N S 442 TYR C C N N 443 TYR O O N N 444 TYR CB C N N 445 TYR CG C Y N 446 TYR CD1 C Y N 447 TYR CD2 C Y N 448 TYR CE1 C Y N 449 TYR CE2 C Y N 450 TYR CZ C Y N 451 TYR OH O N N 452 TYR OXT O N N 453 TYR H H N N 454 TYR H2 H N N 455 TYR HA H N N 456 TYR HB2 H N N 457 TYR HB3 H N N 458 TYR HD1 H N N 459 TYR HD2 H N N 460 TYR HE1 H N N 461 TYR HE2 H N N 462 TYR HH H N N 463 TYR HXT H N N 464 VAL N N N N 465 VAL CA C N S 466 VAL C C N N 467 VAL O O N N 468 VAL CB C N N 469 VAL CG1 C N N 470 VAL CG2 C N N 471 VAL OXT O N N 472 VAL H H N N 473 VAL H2 H N N 474 VAL HA H N N 475 VAL HB H N N 476 VAL HG11 H N N 477 VAL HG12 H N N 478 VAL HG13 H N N 479 VAL HG21 H N N 480 VAL HG22 H N N 481 VAL HG23 H N N 482 VAL HXT H N N 483 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C OP3 P sing N N 70 C OP3 HOP3 sing N N 71 C P OP1 doub N N 72 C P OP2 sing N N 73 C P "O5'" sing N N 74 C OP2 HOP2 sing N N 75 C "O5'" "C5'" sing N N 76 C "C5'" "C4'" sing N N 77 C "C5'" "H5'" sing N N 78 C "C5'" "H5''" sing N N 79 C "C4'" "O4'" sing N N 80 C "C4'" "C3'" sing N N 81 C "C4'" "H4'" sing N N 82 C "O4'" "C1'" sing N N 83 C "C3'" "O3'" sing N N 84 C "C3'" "C2'" sing N N 85 C "C3'" "H3'" sing N N 86 C "O3'" "HO3'" sing N N 87 C "C2'" "O2'" sing N N 88 C "C2'" "C1'" sing N N 89 C "C2'" "H2'" sing N N 90 C "O2'" "HO2'" sing N N 91 C "C1'" N1 sing N N 92 C "C1'" "H1'" sing N N 93 C N1 C2 sing N N 94 C N1 C6 sing N N 95 C C2 O2 doub N N 96 C C2 N3 sing N N 97 C N3 C4 doub N N 98 C C4 N4 sing N N 99 C C4 C5 sing N N 100 C N4 H41 sing N N 101 C N4 H42 sing N N 102 C C5 C6 doub N N 103 C C5 H5 sing N N 104 C C6 H6 sing N N 105 DU OP3 P sing N N 106 DU OP3 HOP3 sing N N 107 DU P OP1 doub N N 108 DU P OP2 sing N N 109 DU P "O5'" sing N N 110 DU OP2 HOP2 sing N N 111 DU "O5'" "C5'" sing N N 112 DU "C5'" "C4'" sing N N 113 DU "C5'" "H5'" sing N N 114 DU "C5'" "H5''" sing N N 115 DU "C4'" "O4'" sing N N 116 DU "C4'" "C3'" sing N N 117 DU "C4'" "H4'" sing N N 118 DU "O4'" "C1'" sing N N 119 DU "C3'" "O3'" sing N N 120 DU "C3'" "C2'" sing N N 121 DU "C3'" "H3'" sing N N 122 DU "O3'" "HO3'" sing N N 123 DU "C2'" "C1'" sing N N 124 DU "C2'" "H2'" sing N N 125 DU "C2'" "H2''" sing N N 126 DU "C1'" N1 sing N N 127 DU "C1'" "H1'" sing N N 128 DU N1 C2 sing N N 129 DU N1 C6 sing N N 130 DU C2 O2 doub N N 131 DU C2 N3 sing N N 132 DU N3 C4 sing N N 133 DU N3 H3 sing N N 134 DU C4 O4 doub N N 135 DU C4 C5 sing N N 136 DU C5 C6 doub N N 137 DU C5 H5 sing N N 138 DU C6 H6 sing N N 139 G OP3 P sing N N 140 G OP3 HOP3 sing N N 141 G P OP1 doub N N 142 G P OP2 sing N N 143 G P "O5'" sing N N 144 G OP2 HOP2 sing N N 145 G "O5'" "C5'" sing N N 146 G "C5'" "C4'" sing N N 147 G "C5'" "H5'" sing N N 148 G "C5'" "H5''" sing N N 149 G "C4'" "O4'" sing N N 150 G "C4'" "C3'" sing N N 151 G "C4'" "H4'" sing N N 152 G "O4'" "C1'" sing N N 153 G "C3'" "O3'" sing N N 154 G "C3'" "C2'" sing N N 155 G "C3'" "H3'" sing N N 156 G "O3'" "HO3'" sing N N 157 G "C2'" "O2'" sing N N 158 G "C2'" "C1'" sing N N 159 G "C2'" "H2'" sing N N 160 G "O2'" "HO2'" sing N N 161 G "C1'" N9 sing N N 162 G "C1'" "H1'" sing N N 163 G N9 C8 sing Y N 164 G N9 C4 sing Y N 165 G C8 N7 doub Y N 166 G C8 H8 sing N N 167 G N7 C5 sing Y N 168 G C5 C6 sing N N 169 G C5 C4 doub Y N 170 G C6 O6 doub N N 171 G C6 N1 sing N N 172 G N1 C2 sing N N 173 G N1 H1 sing N N 174 G C2 N2 sing N N 175 G C2 N3 doub N N 176 G N2 H21 sing N N 177 G N2 H22 sing N N 178 G N3 C4 sing N N 179 GLN N CA sing N N 180 GLN N H sing N N 181 GLN N H2 sing N N 182 GLN CA C sing N N 183 GLN CA CB sing N N 184 GLN CA HA sing N N 185 GLN C O doub N N 186 GLN C OXT sing N N 187 GLN CB CG sing N N 188 GLN CB HB2 sing N N 189 GLN CB HB3 sing N N 190 GLN CG CD sing N N 191 GLN CG HG2 sing N N 192 GLN CG HG3 sing N N 193 GLN CD OE1 doub N N 194 GLN CD NE2 sing N N 195 GLN NE2 HE21 sing N N 196 GLN NE2 HE22 sing N N 197 GLN OXT HXT sing N N 198 GLU N CA sing N N 199 GLU N H sing N N 200 GLU N H2 sing N N 201 GLU CA C sing N N 202 GLU CA CB sing N N 203 GLU CA HA sing N N 204 GLU C O doub N N 205 GLU C OXT sing N N 206 GLU CB CG sing N N 207 GLU CB HB2 sing N N 208 GLU CB HB3 sing N N 209 GLU CG CD sing N N 210 GLU CG HG2 sing N N 211 GLU CG HG3 sing N N 212 GLU CD OE1 doub N N 213 GLU CD OE2 sing N N 214 GLU OE2 HE2 sing N N 215 GLU OXT HXT sing N N 216 GLY N CA sing N N 217 GLY N H sing N N 218 GLY N H2 sing N N 219 GLY CA C sing N N 220 GLY CA HA2 sing N N 221 GLY CA HA3 sing N N 222 GLY C O doub N N 223 GLY C OXT sing N N 224 GLY OXT HXT sing N N 225 HIS N CA sing N N 226 HIS N H sing N N 227 HIS N H2 sing N N 228 HIS CA C sing N N 229 HIS CA CB sing N N 230 HIS CA HA sing N N 231 HIS C O doub N N 232 HIS C OXT sing N N 233 HIS CB CG sing N N 234 HIS CB HB2 sing N N 235 HIS CB HB3 sing N N 236 HIS CG ND1 sing Y N 237 HIS CG CD2 doub Y N 238 HIS ND1 CE1 doub Y N 239 HIS ND1 HD1 sing N N 240 HIS CD2 NE2 sing Y N 241 HIS CD2 HD2 sing N N 242 HIS CE1 NE2 sing Y N 243 HIS CE1 HE1 sing N N 244 HIS NE2 HE2 sing N N 245 HIS OXT HXT sing N N 246 HOH O H1 sing N N 247 HOH O H2 sing N N 248 ILE N CA sing N N 249 ILE N H sing N N 250 ILE N H2 sing N N 251 ILE CA C sing N N 252 ILE CA CB sing N N 253 ILE CA HA sing N N 254 ILE C O doub N N 255 ILE C OXT sing N N 256 ILE CB CG1 sing N N 257 ILE CB CG2 sing N N 258 ILE CB HB sing N N 259 ILE CG1 CD1 sing N N 260 ILE CG1 HG12 sing N N 261 ILE CG1 HG13 sing N N 262 ILE CG2 HG21 sing N N 263 ILE CG2 HG22 sing N N 264 ILE CG2 HG23 sing N N 265 ILE CD1 HD11 sing N N 266 ILE CD1 HD12 sing N N 267 ILE CD1 HD13 sing N N 268 ILE OXT HXT sing N N 269 LEU N CA sing N N 270 LEU N H sing N N 271 LEU N H2 sing N N 272 LEU CA C sing N N 273 LEU CA CB sing N N 274 LEU CA HA sing N N 275 LEU C O doub N N 276 LEU C OXT sing N N 277 LEU CB CG sing N N 278 LEU CB HB2 sing N N 279 LEU CB HB3 sing N N 280 LEU CG CD1 sing N N 281 LEU CG CD2 sing N N 282 LEU CG HG sing N N 283 LEU CD1 HD11 sing N N 284 LEU CD1 HD12 sing N N 285 LEU CD1 HD13 sing N N 286 LEU CD2 HD21 sing N N 287 LEU CD2 HD22 sing N N 288 LEU CD2 HD23 sing N N 289 LEU OXT HXT sing N N 290 LYS N CA sing N N 291 LYS N H sing N N 292 LYS N H2 sing N N 293 LYS CA C sing N N 294 LYS CA CB sing N N 295 LYS CA HA sing N N 296 LYS C O doub N N 297 LYS C OXT sing N N 298 LYS CB CG sing N N 299 LYS CB HB2 sing N N 300 LYS CB HB3 sing N N 301 LYS CG CD sing N N 302 LYS CG HG2 sing N N 303 LYS CG HG3 sing N N 304 LYS CD CE sing N N 305 LYS CD HD2 sing N N 306 LYS CD HD3 sing N N 307 LYS CE NZ sing N N 308 LYS CE HE2 sing N N 309 LYS CE HE3 sing N N 310 LYS NZ HZ1 sing N N 311 LYS NZ HZ2 sing N N 312 LYS NZ HZ3 sing N N 313 LYS OXT HXT sing N N 314 MET N CA sing N N 315 MET N H sing N N 316 MET N H2 sing N N 317 MET CA C sing N N 318 MET CA CB sing N N 319 MET CA HA sing N N 320 MET C O doub N N 321 MET C OXT sing N N 322 MET CB CG sing N N 323 MET CB HB2 sing N N 324 MET CB HB3 sing N N 325 MET CG SD sing N N 326 MET CG HG2 sing N N 327 MET CG HG3 sing N N 328 MET SD CE sing N N 329 MET CE HE1 sing N N 330 MET CE HE2 sing N N 331 MET CE HE3 sing N N 332 MET OXT HXT sing N N 333 PHE N CA sing N N 334 PHE N H sing N N 335 PHE N H2 sing N N 336 PHE CA C sing N N 337 PHE CA CB sing N N 338 PHE CA HA sing N N 339 PHE C O doub N N 340 PHE C OXT sing N N 341 PHE CB CG sing N N 342 PHE CB HB2 sing N N 343 PHE CB HB3 sing N N 344 PHE CG CD1 doub Y N 345 PHE CG CD2 sing Y N 346 PHE CD1 CE1 sing Y N 347 PHE CD1 HD1 sing N N 348 PHE CD2 CE2 doub Y N 349 PHE CD2 HD2 sing N N 350 PHE CE1 CZ doub Y N 351 PHE CE1 HE1 sing N N 352 PHE CE2 CZ sing Y N 353 PHE CE2 HE2 sing N N 354 PHE CZ HZ sing N N 355 PHE OXT HXT sing N N 356 PRO N CA sing N N 357 PRO N CD sing N N 358 PRO N H sing N N 359 PRO CA C sing N N 360 PRO CA CB sing N N 361 PRO CA HA sing N N 362 PRO C O doub N N 363 PRO C OXT sing N N 364 PRO CB CG sing N N 365 PRO CB HB2 sing N N 366 PRO CB HB3 sing N N 367 PRO CG CD sing N N 368 PRO CG HG2 sing N N 369 PRO CG HG3 sing N N 370 PRO CD HD2 sing N N 371 PRO CD HD3 sing N N 372 PRO OXT HXT sing N N 373 SER N CA sing N N 374 SER N H sing N N 375 SER N H2 sing N N 376 SER CA C sing N N 377 SER CA CB sing N N 378 SER CA HA sing N N 379 SER C O doub N N 380 SER C OXT sing N N 381 SER CB OG sing N N 382 SER CB HB2 sing N N 383 SER CB HB3 sing N N 384 SER OG HG sing N N 385 SER OXT HXT sing N N 386 THR N CA sing N N 387 THR N H sing N N 388 THR N H2 sing N N 389 THR CA C sing N N 390 THR CA CB sing N N 391 THR CA HA sing N N 392 THR C O doub N N 393 THR C OXT sing N N 394 THR CB OG1 sing N N 395 THR CB CG2 sing N N 396 THR CB HB sing N N 397 THR OG1 HG1 sing N N 398 THR CG2 HG21 sing N N 399 THR CG2 HG22 sing N N 400 THR CG2 HG23 sing N N 401 THR OXT HXT sing N N 402 TRP N CA sing N N 403 TRP N H sing N N 404 TRP N H2 sing N N 405 TRP CA C sing N N 406 TRP CA CB sing N N 407 TRP CA HA sing N N 408 TRP C O doub N N 409 TRP C OXT sing N N 410 TRP CB CG sing N N 411 TRP CB HB2 sing N N 412 TRP CB HB3 sing N N 413 TRP CG CD1 doub Y N 414 TRP CG CD2 sing Y N 415 TRP CD1 NE1 sing Y N 416 TRP CD1 HD1 sing N N 417 TRP CD2 CE2 doub Y N 418 TRP CD2 CE3 sing Y N 419 TRP NE1 CE2 sing Y N 420 TRP NE1 HE1 sing N N 421 TRP CE2 CZ2 sing Y N 422 TRP CE3 CZ3 doub Y N 423 TRP CE3 HE3 sing N N 424 TRP CZ2 CH2 doub Y N 425 TRP CZ2 HZ2 sing N N 426 TRP CZ3 CH2 sing Y N 427 TRP CZ3 HZ3 sing N N 428 TRP CH2 HH2 sing N N 429 TRP OXT HXT sing N N 430 TYR N CA sing N N 431 TYR N H sing N N 432 TYR N H2 sing N N 433 TYR CA C sing N N 434 TYR CA CB sing N N 435 TYR CA HA sing N N 436 TYR C O doub N N 437 TYR C OXT sing N N 438 TYR CB CG sing N N 439 TYR CB HB2 sing N N 440 TYR CB HB3 sing N N 441 TYR CG CD1 doub Y N 442 TYR CG CD2 sing Y N 443 TYR CD1 CE1 sing Y N 444 TYR CD1 HD1 sing N N 445 TYR CD2 CE2 doub Y N 446 TYR CD2 HD2 sing N N 447 TYR CE1 CZ doub Y N 448 TYR CE1 HE1 sing N N 449 TYR CE2 CZ sing Y N 450 TYR CE2 HE2 sing N N 451 TYR CZ OH sing N N 452 TYR OH HH sing N N 453 TYR OXT HXT sing N N 454 VAL N CA sing N N 455 VAL N H sing N N 456 VAL N H2 sing N N 457 VAL CA C sing N N 458 VAL CA CB sing N N 459 VAL CA HA sing N N 460 VAL C O doub N N 461 VAL C OXT sing N N 462 VAL CB CG1 sing N N 463 VAL CB CG2 sing N N 464 VAL CB HB sing N N 465 VAL CG1 HG11 sing N N 466 VAL CG1 HG12 sing N N 467 VAL CG1 HG13 sing N N 468 VAL CG2 HG21 sing N N 469 VAL CG2 HG22 sing N N 470 VAL CG2 HG23 sing N N 471 VAL OXT HXT sing N N 472 # _ndb_struct_conf_na.entry_id 2GXB _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 2 1_555 B G 7 1_555 -0.508 -0.249 0.415 -7.464 -8.269 0.067 1 E_C1:G6_F E 1 ? F 6 ? 19 1 1 A G 3 1_555 B C 6 1_555 0.117 -0.174 -0.197 -4.098 3.576 3.183 2 E_G2:C5_F E 2 ? F 5 ? 19 1 1 A C 4 1_555 B G 5 1_555 -0.314 -0.059 0.134 -1.484 1.487 -1.616 3 E_C3:G4_F E 3 ? F 4 ? 19 1 1 A G 5 1_555 B C 4 1_555 0.231 -0.040 0.130 1.340 1.332 0.547 4 E_G4:C3_F E 4 ? F 3 ? 19 1 1 A C 6 1_555 B G 3 1_555 -0.327 -0.137 -0.175 3.777 6.720 0.266 5 E_C5:G2_F E 5 ? F 2 ? 19 1 1 A G 7 1_555 B C 2 1_555 0.430 0.019 0.532 9.485 -0.680 -0.273 6 E_G6:C1_F E 6 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 2 1_555 B G 7 1_555 A G 3 1_555 B C 6 1_555 0.345 5.283 3.565 4.716 2.575 -7.282 -38.231 10.876 1.189 -17.475 32.001 -9.048 1 EE_C1G2:C5G6_FF E 1 ? F 6 ? E 2 ? F 5 ? 1 A G 3 1_555 B C 6 1_555 A C 4 1_555 B G 5 1_555 -0.056 -1.641 3.263 -2.439 -6.235 -49.958 2.358 -0.234 3.045 7.344 -2.873 -50.376 2 EE_G2C3:G4C5_FF E 2 ? F 5 ? E 3 ? F 4 ? 1 A C 4 1_555 B G 5 1_555 A G 5 1_555 B C 4 1_555 0.015 5.182 3.547 0.137 -0.794 -8.090 -33.938 0.561 4.035 5.609 0.970 -8.130 3 EE_C3G4:C3G4_FF E 3 ? F 4 ? E 4 ? F 3 ? 1 A G 5 1_555 B C 4 1_555 A C 6 1_555 B G 3 1_555 -0.101 -1.622 3.240 1.774 -6.055 -51.056 2.269 0.000 3.044 6.994 2.049 -51.419 4 EE_G4C5:G2C3_FF E 4 ? F 3 ? E 5 ? F 2 ? 1 A C 6 1_555 B G 3 1_555 A G 7 1_555 B C 2 1_555 0.013 5.148 3.474 -3.241 0.670 -7.951 -35.974 -8.094 2.813 -4.579 -22.150 -8.611 5 EE_C5G6:C1G2_FF E 5 ? F 2 ? E 6 ? F 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QBJ _pdbx_initial_refinement_model.details 'PDB entry: 1QBJ' #