HEADER TRANSFERASE 09-MAY-06 2GYO TITLE METHANETHIOL-CYS 112 INHIBITION COMPLEX OF E. COLI KETOACYL SYNTHASE TITLE 2 III (FABH) AND COENZYME A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-OXOACYL- [ACYL-CARRIER-PROTEIN] SYNTHASE III, BETA- COMPND 5 KETOACYL-ACP SYNTHASE III, KAS III, ECFABH; COMPND 6 EC: 2.3.1.41; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FABH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3 PLYSE)/PLH14; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FATTY ACID BIOSYNTHESIS, ALKYL-COA-DISULFIDE, MECHANISM-BASED KEYWDS 2 INHIBITOR, MYCOBACTERIUM TUBERCULOSIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.ALHAMADSHEH,F.MUSAYEV,A.A.KOMISSAROV,S.SACHDEVA,H.T.WRIGHT, AUTHOR 2 N.SCARSDALE,G.FLOROVA,K.A.REYNOLDS REVDAT 3 13-JUL-11 2GYO 1 VERSN REVDAT 2 24-FEB-09 2GYO 1 VERSN REVDAT 1 05-JUN-07 2GYO 0 JRNL AUTH M.M.ALHAMADSHEH,F.MUSAYEV,A.A.KOMISSAROV,S.SACHDEVA, JRNL AUTH 2 H.T.WRIGHT,N.SCARSDALE,G.FLOROVA,K.A.REYNOLDS JRNL TITL ALKYL-COA DISULFIDES AS INHIBITORS AND MECHANISTIC PROBES JRNL TITL 2 FOR FABH ENZYMES. JRNL REF CHEM.BIOL. V. 14 513 2007 JRNL REFN ISSN 1074-5521 JRNL PMID 17524982 JRNL DOI 10.1016/J.CHEMBIOL.2007.03.013 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 37808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4239 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2765 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 331 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4672 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 221 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : 1.39000 REMARK 3 B33 (A**2) : -1.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.233 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.206 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.216 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4891 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6678 ; 1.113 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 649 ; 5.804 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;36.738 ;24.503 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 763 ;14.820 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;18.537 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 796 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3659 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2468 ; 0.189 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3446 ; 0.292 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 333 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 57 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.122 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3281 ; 1.423 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5115 ; 2.071 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1813 ; 3.277 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1563 ; 4.348 ; 6.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 317 REMARK 3 RESIDUE RANGE : A 963 A 963 REMARK 3 ORIGIN FOR THE GROUP (A): 39.2887 66.9758 71.0029 REMARK 3 T TENSOR REMARK 3 T11: -.1363 T22: -.1392 REMARK 3 T33: -.0823 T12: -.0161 REMARK 3 T13: .0109 T23: .0019 REMARK 3 L TENSOR REMARK 3 L11: 1.2547 L22: .4942 REMARK 3 L33: 1.5874 L12: -.3835 REMARK 3 L13: -.0941 L23: .0963 REMARK 3 S TENSOR REMARK 3 S11: -.0011 S12: .0608 S13: .0675 REMARK 3 S21: .0004 S22: -.0009 S23: -.0553 REMARK 3 S31: -.0805 S32: .0685 S33: .0020 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 317 REMARK 3 ORIGIN FOR THE GROUP (A): 47.9204 61.7414 98.7568 REMARK 3 T TENSOR REMARK 3 T11: -.0357 T22: -.0980 REMARK 3 T33: -.0326 T12: .0056 REMARK 3 T13: -.0470 T23: -.0246 REMARK 3 L TENSOR REMARK 3 L11: 1.0300 L22: 1.3297 REMARK 3 L33: 2.4249 L12: .2801 REMARK 3 L13: .1719 L23: -.3741 REMARK 3 S TENSOR REMARK 3 S11: -.0139 S12: -.2340 S13: .0041 REMARK 3 S21: .2401 S22: -.0005 S23: -.0861 REMARK 3 S31: -.0089 S32: .0434 S33: .0144 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2GYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037710. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX OPTICS REMARK 200 OPTICS : RIGAKU VARIMAX CONFOCAL OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42137 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 31.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 5.090 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.41 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.26400 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7M AMMONIUM SULFATE, 2% PEG400, 100 REMARK 280 MM NA HEPES (PH 7.0), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.15500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.87500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.87500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.15500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS THE DIMER CORRESPONDING TO THE REMARK 300 BIOLOGICAL ASSEMBLY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 187 CG CD OE1 OE2 REMARK 470 GLU B 31 CG CD OE1 OE2 REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 151 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 198 CG OD1 REMARK 470 ASN B 210 CG OD1 REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 75 140.10 -171.19 REMARK 500 SER A 82 31.05 -154.02 REMARK 500 ALA A 110 29.32 -146.52 REMARK 500 ALA A 111 -133.13 51.59 REMARK 500 VAL A 141 55.00 -117.93 REMARK 500 LEU A 189 106.78 -160.07 REMARK 500 SER A 276 -124.99 53.74 REMARK 500 PHE A 308 92.05 58.09 REMARK 500 ALA B 110 31.61 -142.41 REMARK 500 ALA B 111 -137.81 53.50 REMARK 500 LEU B 189 109.12 -160.55 REMARK 500 ASN B 198 -52.50 166.67 REMARK 500 SER B 276 -125.26 56.06 REMARK 500 PHE B 308 89.43 67.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 172 GLY A 173 147.00 REMARK 500 PRO B 172 GLY B 173 145.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 962 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MEE A 963 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HND RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BETA-KETOACYL-ACP SYNTHASE III-COA REMARK 900 COMPLEX REMARK 900 RELATED ID: 1EBL RELATED DB: PDB REMARK 900 THE 1.8 A CRYSTAL STRUCTURE AND ACTIVE SITE ARCHITECTURE OF REMARK 900 BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE III (FABH) REMARK 900 FROM ESHERICHIA COLI DBREF 2GYO A 1 317 UNP P0A6R0 FABH_ECOLI 1 317 DBREF 2GYO B 1 317 UNP P0A6R0 FABH_ECOLI 1 317 SEQRES 1 A 317 MET TYR THR LYS ILE ILE GLY THR GLY SER TYR LEU PRO SEQRES 2 A 317 GLU GLN VAL ARG THR ASN ALA ASP LEU GLU LYS MET VAL SEQRES 3 A 317 ASP THR SER ASP GLU TRP ILE VAL THR ARG THR GLY ILE SEQRES 4 A 317 ARG GLU ARG HIS ILE ALA ALA PRO ASN GLU THR VAL SER SEQRES 5 A 317 THR MET GLY PHE GLU ALA ALA THR ARG ALA ILE GLU MET SEQRES 6 A 317 ALA GLY ILE GLU LYS ASP GLN ILE GLY LEU ILE VAL VAL SEQRES 7 A 317 ALA THR THR SER ALA THR HIS ALA PHE PRO SER ALA ALA SEQRES 8 A 317 CYS GLN ILE GLN SER MET LEU GLY ILE LYS GLY CYS PRO SEQRES 9 A 317 ALA PHE ASP VAL ALA ALA ALA CYS ALA GLY PHE THR TYR SEQRES 10 A 317 ALA LEU SER VAL ALA ASP GLN TYR VAL LYS SER GLY ALA SEQRES 11 A 317 VAL LYS TYR ALA LEU VAL VAL GLY SER ASP VAL LEU ALA SEQRES 12 A 317 ARG THR CYS ASP PRO THR ASP ARG GLY THR ILE ILE ILE SEQRES 13 A 317 PHE GLY ASP GLY ALA GLY ALA ALA VAL LEU ALA ALA SER SEQRES 14 A 317 GLU GLU PRO GLY ILE ILE SER THR HIS LEU HIS ALA ASP SEQRES 15 A 317 GLY SER TYR GLY GLU LEU LEU THR LEU PRO ASN ALA ASP SEQRES 16 A 317 ARG VAL ASN PRO GLU ASN SER ILE HIS LEU THR MET ALA SEQRES 17 A 317 GLY ASN GLU VAL PHE LYS VAL ALA VAL THR GLU LEU ALA SEQRES 18 A 317 HIS ILE VAL ASP GLU THR LEU ALA ALA ASN ASN LEU ASP SEQRES 19 A 317 ARG SER GLN LEU ASP TRP LEU VAL PRO HIS GLN ALA ASN SEQRES 20 A 317 LEU ARG ILE ILE SER ALA THR ALA LYS LYS LEU GLY MET SEQRES 21 A 317 SER MET ASP ASN VAL VAL VAL THR LEU ASP ARG HIS GLY SEQRES 22 A 317 ASN THR SER ALA ALA SER VAL PRO CYS ALA LEU ASP GLU SEQRES 23 A 317 ALA VAL ARG ASP GLY ARG ILE LYS PRO GLY GLN LEU VAL SEQRES 24 A 317 LEU LEU GLU ALA PHE GLY GLY GLY PHE THR TRP GLY SER SEQRES 25 A 317 ALA LEU VAL ARG PHE SEQRES 1 B 317 MET TYR THR LYS ILE ILE GLY THR GLY SER TYR LEU PRO SEQRES 2 B 317 GLU GLN VAL ARG THR ASN ALA ASP LEU GLU LYS MET VAL SEQRES 3 B 317 ASP THR SER ASP GLU TRP ILE VAL THR ARG THR GLY ILE SEQRES 4 B 317 ARG GLU ARG HIS ILE ALA ALA PRO ASN GLU THR VAL SER SEQRES 5 B 317 THR MET GLY PHE GLU ALA ALA THR ARG ALA ILE GLU MET SEQRES 6 B 317 ALA GLY ILE GLU LYS ASP GLN ILE GLY LEU ILE VAL VAL SEQRES 7 B 317 ALA THR THR SER ALA THR HIS ALA PHE PRO SER ALA ALA SEQRES 8 B 317 CYS GLN ILE GLN SER MET LEU GLY ILE LYS GLY CYS PRO SEQRES 9 B 317 ALA PHE ASP VAL ALA ALA ALA CYS ALA GLY PHE THR TYR SEQRES 10 B 317 ALA LEU SER VAL ALA ASP GLN TYR VAL LYS SER GLY ALA SEQRES 11 B 317 VAL LYS TYR ALA LEU VAL VAL GLY SER ASP VAL LEU ALA SEQRES 12 B 317 ARG THR CYS ASP PRO THR ASP ARG GLY THR ILE ILE ILE SEQRES 13 B 317 PHE GLY ASP GLY ALA GLY ALA ALA VAL LEU ALA ALA SER SEQRES 14 B 317 GLU GLU PRO GLY ILE ILE SER THR HIS LEU HIS ALA ASP SEQRES 15 B 317 GLY SER TYR GLY GLU LEU LEU THR LEU PRO ASN ALA ASP SEQRES 16 B 317 ARG VAL ASN PRO GLU ASN SER ILE HIS LEU THR MET ALA SEQRES 17 B 317 GLY ASN GLU VAL PHE LYS VAL ALA VAL THR GLU LEU ALA SEQRES 18 B 317 HIS ILE VAL ASP GLU THR LEU ALA ALA ASN ASN LEU ASP SEQRES 19 B 317 ARG SER GLN LEU ASP TRP LEU VAL PRO HIS GLN ALA ASN SEQRES 20 B 317 LEU ARG ILE ILE SER ALA THR ALA LYS LYS LEU GLY MET SEQRES 21 B 317 SER MET ASP ASN VAL VAL VAL THR LEU ASP ARG HIS GLY SEQRES 22 B 317 ASN THR SER ALA ALA SER VAL PRO CYS ALA LEU ASP GLU SEQRES 23 B 317 ALA VAL ARG ASP GLY ARG ILE LYS PRO GLY GLN LEU VAL SEQRES 24 B 317 LEU LEU GLU ALA PHE GLY GLY GLY PHE THR TRP GLY SER SEQRES 25 B 317 ALA LEU VAL ARG PHE HET SO4 B 318 5 HET SO4 B 319 5 HET COA A 962 48 HET MEE A 963 2 HETNAM SO4 SULFATE ION HETNAM COA COENZYME A HETNAM MEE METHANETHIOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 COA C21 H36 N7 O16 P3 S FORMUL 6 MEE C H4 S FORMUL 7 HOH *221(H2 O) HELIX 1 1 ASN A 19 VAL A 26 1 8 HELIX 2 2 SER A 29 GLY A 38 1 10 HELIX 3 3 THR A 50 GLY A 67 1 18 HELIX 4 4 GLU A 69 ILE A 73 5 5 HELIX 5 5 SER A 89 GLY A 99 1 11 HELIX 6 6 ALA A 110 CYS A 112 5 3 HELIX 7 7 ALA A 113 SER A 128 1 16 HELIX 8 8 ASP A 150 ILE A 155 1 6 HELIX 9 9 GLY A 183 GLU A 187 5 5 HELIX 10 10 ALA A 208 ASN A 231 1 24 HELIX 11 11 ASP A 234 LEU A 238 5 5 HELIX 12 12 ASN A 247 LEU A 258 1 12 HELIX 13 13 SER A 261 VAL A 265 5 5 HELIX 14 14 THR A 268 GLY A 273 1 6 HELIX 15 15 THR A 275 ALA A 277 5 3 HELIX 16 16 ALA A 278 ASP A 290 1 13 HELIX 17 17 ASN B 19 VAL B 26 1 8 HELIX 18 18 SER B 29 THR B 37 1 9 HELIX 19 19 THR B 50 GLY B 67 1 18 HELIX 20 20 GLU B 69 ILE B 73 5 5 HELIX 21 21 SER B 89 LEU B 98 1 10 HELIX 22 22 ALA B 110 CYS B 112 5 3 HELIX 23 23 ALA B 113 SER B 128 1 16 HELIX 24 24 ASP B 150 ILE B 155 1 6 HELIX 25 25 GLY B 183 GLU B 187 5 5 HELIX 26 26 ALA B 208 ASN B 231 1 24 HELIX 27 27 ASP B 234 LEU B 238 5 5 HELIX 28 28 ASN B 247 GLY B 259 1 13 HELIX 29 29 SER B 261 VAL B 265 5 5 HELIX 30 30 THR B 268 GLY B 273 1 6 HELIX 31 31 THR B 275 ALA B 277 5 3 HELIX 32 32 ALA B 278 ASP B 290 1 13 SHEET 1 A10 TYR A 2 TYR A 11 0 SHEET 2 A10 GLY A 160 SER A 169 -1 O ALA A 161 N TYR A 11 SHEET 3 A10 TYR A 133 ASP A 140 -1 N GLY A 138 O GLY A 162 SHEET 4 A10 LEU A 75 ALA A 79 1 N ALA A 79 O VAL A 137 SHEET 5 A10 ALA A 105 ALA A 109 1 O VAL A 108 N VAL A 78 SHEET 6 A10 ALA B 105 ALA B 109 -1 O ALA B 109 N ASP A 107 SHEET 7 A10 LEU B 75 ALA B 79 1 N VAL B 78 O VAL B 108 SHEET 8 A10 TYR B 133 ASP B 140 1 O VAL B 137 N ALA B 79 SHEET 9 A10 GLY B 160 SER B 169 -1 O GLY B 162 N GLY B 138 SHEET 10 A10 TYR B 2 TYR B 11 -1 N LYS B 4 O ALA B 167 SHEET 1 B 2 GLN A 15 THR A 18 0 SHEET 2 B 2 GLU A 41 ILE A 44 -1 O ARG A 42 N ARG A 17 SHEET 1 C 3 HIS A 85 PHE A 87 0 SHEET 2 C 3 LEU B 189 PRO B 192 -1 O LEU B 191 N PHE A 87 SHEET 3 C 3 THR B 206 MET B 207 -1 O THR B 206 N THR B 190 SHEET 1 D 4 ILE A 174 ALA A 181 0 SHEET 2 D 4 THR A 309 ARG A 316 -1 O LEU A 314 N ILE A 175 SHEET 3 D 4 LEU A 298 GLY A 305 -1 N VAL A 299 O VAL A 315 SHEET 4 D 4 TRP A 240 PRO A 243 1 N VAL A 242 O LEU A 300 SHEET 1 E 3 THR A 206 MET A 207 0 SHEET 2 E 3 LEU A 189 PRO A 192 -1 N THR A 190 O THR A 206 SHEET 3 E 3 HIS B 85 PHE B 87 -1 O PHE B 87 N LEU A 191 SHEET 1 F 2 GLN B 15 THR B 18 0 SHEET 2 F 2 GLU B 41 ILE B 44 -1 O ARG B 42 N ARG B 17 SHEET 1 G 4 ILE B 174 ALA B 181 0 SHEET 2 G 4 THR B 309 ARG B 316 -1 O TRP B 310 N HIS B 180 SHEET 3 G 4 LEU B 298 GLY B 305 -1 N LEU B 301 O ALA B 313 SHEET 4 G 4 TRP B 240 PRO B 243 1 N VAL B 242 O LEU B 300 LINK SG CYS A 112 S MEE A 963 1555 1555 2.03 CISPEP 1 PHE A 87 PRO A 88 0 -2.72 CISPEP 2 PHE B 87 PRO B 88 0 -2.42 SITE 1 AC1 5 TYR A 125 ALA A 130 THR B 177 LEU B 179 SITE 2 AC1 5 HOH B 534 SITE 1 AC2 5 LYS B 4 SER B 169 GLU B 170 GLU B 171 SITE 2 AC2 5 HOH B 417 SITE 1 AC3 17 THR A 28 TRP A 32 ARG A 36 ARG A 151 SITE 2 AC3 17 MET A 207 GLY A 209 ASN A 210 PHE A 213 SITE 3 AC3 17 ALA A 246 ASN A 247 ARG A 249 ASN A 274 SITE 4 AC3 17 PHE A 304 HOH A 490 HOH A 497 MEE A 963 SITE 5 AC3 17 ARG B 40 SITE 1 AC4 5 ALA A 111 CYS A 112 GLY A 306 COA A 962 SITE 2 AC4 5 PHE B 87 CRYST1 64.310 81.910 121.750 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015550 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012209 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008214 0.00000