data_2H1K # _entry.id 2H1K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2H1K pdb_00002h1k 10.2210/pdb2h1k/pdb NDB PD0810 ? ? RCSB RCSB037814 ? ? WWPDB D_1000037814 ? ? # _pdbx_database_status.entry_id 2H1K _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2006-05-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Longo, A.' 1 'Guanga, G.P.' 2 'Rose, R.B.' 3 # _citation.id primary _citation.title 'Structural basis for induced fit mechanisms in DNA recognition by the pdx1 homeodomain' _citation.journal_abbrev Biochemistry _citation.journal_volume 46 _citation.page_first 2948 _citation.page_last 2957 _citation.year 2007 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17315980 _citation.pdbx_database_id_DOI 10.1021/bi060969l # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Longo, A.' 1 ? primary 'Guanga, G.P.' 2 ? primary 'Rose, R.B.' 3 ? # _cell.entry_id 2H1K _cell.length_a 58.282 _cell.length_b 61.928 _cell.length_c 96.445 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2H1K _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '15-mer DNA' 4626.050 2 ? ? ? ? 2 polymer syn '15-mer DNA' 4549.969 2 ? ? ? ? 3 polymer man 'Pancreatic and duodenal homeobox 1' 7885.207 2 ? ? 'residues 146-206' ? 4 water nat water 18.015 23 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Insulin promoter factor 1; IPF-1; Homeodomain protein PDX1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DG)(DA)(DA)(DA)(DC)(DT)(DC)(DA)(DT)(DT)(DA)(DG)(DA)(DG)' AGAAACTCATTAGAG C,E ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DC)(DT)(DA)(DA)(DT)(DG)(DA)(DG)(DT)(DT)(DT)(DC)' TCTCTAATGAGTTTC D,F ? 3 'polypeptide(L)' no no GSNKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEED GSNKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEED A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DA n 1 4 DA n 1 5 DA n 1 6 DC n 1 7 DT n 1 8 DC n 1 9 DA n 1 10 DT n 1 11 DT n 1 12 DA n 1 13 DG n 1 14 DA n 1 15 DG n 2 1 DT n 2 2 DC n 2 3 DT n 2 4 DC n 2 5 DT n 2 6 DA n 2 7 DA n 2 8 DT n 2 9 DG n 2 10 DA n 2 11 DG n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DC n 3 1 GLY n 3 2 SER n 3 3 ASN n 3 4 LYS n 3 5 ARG n 3 6 THR n 3 7 ARG n 3 8 THR n 3 9 ALA n 3 10 TYR n 3 11 THR n 3 12 ARG n 3 13 ALA n 3 14 GLN n 3 15 LEU n 3 16 LEU n 3 17 GLU n 3 18 LEU n 3 19 GLU n 3 20 LYS n 3 21 GLU n 3 22 PHE n 3 23 LEU n 3 24 PHE n 3 25 ASN n 3 26 LYS n 3 27 TYR n 3 28 ILE n 3 29 SER n 3 30 ARG n 3 31 PRO n 3 32 ARG n 3 33 ARG n 3 34 VAL n 3 35 GLU n 3 36 LEU n 3 37 ALA n 3 38 VAL n 3 39 MET n 3 40 LEU n 3 41 ASN n 3 42 LEU n 3 43 THR n 3 44 GLU n 3 45 ARG n 3 46 HIS n 3 47 ILE n 3 48 LYS n 3 49 ILE n 3 50 TRP n 3 51 PHE n 3 52 GLN n 3 53 ASN n 3 54 ARG n 3 55 ARG n 3 56 MET n 3 57 LYS n 3 58 TRP n 3 59 LYS n 3 60 LYS n 3 61 GLU n 3 62 GLU n 3 63 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'golden hamster' _entity_src_gen.gene_src_genus Mesocricetus _entity_src_gen.pdbx_gene_src_gene 'IPF1, PDX1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mesocricetus auratus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10036 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP IPF1_MESAU P70118 3 NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEED 146 ? 2 PDB 2H1K 2H1K 1 ? ? ? 3 PDB 2H1K 2H1K 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H1K A 3 ? 63 ? P70118 146 ? 206 ? 1 61 2 1 2H1K B 3 ? 63 ? P70118 146 ? 206 ? 1 61 3 2 2H1K C 1 ? 15 ? 2H1K 100 ? 114 ? 100 114 4 3 2H1K D 1 ? 15 ? 2H1K 214 ? 228 ? 214 228 5 2 2H1K E 1 ? 15 ? 2H1K 100 ? 114 ? 100 114 6 3 2H1K F 1 ? 15 ? 2H1K 214 ? 228 ? 214 228 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2H1K GLY A 1 ? UNP P70118 ? ? 'cloning artifact' -1 1 1 2H1K SER A 2 ? UNP P70118 ? ? 'cloning artifact' 0 2 2 2H1K GLY B 1 ? UNP P70118 ? ? 'cloning artifact' -1 3 2 2H1K SER B 2 ? UNP P70118 ? ? 'cloning artifact' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2H1K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_percent_sol 50.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method microbatch-under-oil _exptl_crystal_grow.temp 281.15 _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.1 mM Imidazole pH 7.0, 280 mM MgCl2, and 21.4 % PEG 4000, microbatch-under-oil, temperature 281.15K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 Imidazole ? ? ? 1 2 1 MgCl2 ? ? ? 1 3 1 'PEG 4000' ? ? ? 1 4 2 Imidazole ? ? ? 1 5 2 MgCl2 ? ? ? 1 6 2 'PEG 4000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2005-06-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2H1K _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.42 _reflns.d_resolution_low 53 _reflns.number_all 14198 _reflns.number_obs 14198 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.42 _reflns_shell.d_res_low 2.57 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs 0.351 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2H1K _refine.ls_d_res_high 2.42 _refine.ls_d_res_low 53 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 14198 _refine.ls_number_reflns_obs 13993 _refine.ls_number_reflns_R_free 1334 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.227 _refine.ls_R_factor_R_free 0.277 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 9.5 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB Entry 9ANT' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -2.688 _refine.aniso_B[1][2] .000 _refine.aniso_B[1][3] .000 _refine.aniso_B[2][2] -18.318 _refine.aniso_B[2][3] .000 _refine.aniso_B[3][3] 21.006 _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1008 _refine_hist.pdbx_number_atoms_nucleic_acid 1218 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 2249 _refine_hist.d_res_high 2.42 _refine_hist.d_res_low 53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.57 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2H1K _struct.title 'Crystal structure of the Pdx1 homeodomain in complex with DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H1K _struct_keywords.pdbx_keywords Transcription/DNA _struct_keywords.text 'protein-dna complex, Transcription-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA E 13 ? ASN E 25 ? ALA A 11 ASN A 23 1 ? 13 HELX_P HELX_P2 2 SER E 29 ? ASN E 41 ? SER A 27 ASN A 39 1 ? 13 HELX_P HELX_P3 3 HIS E 46 ? LYS E 60 ? HIS A 44 LYS A 58 1 ? 15 HELX_P HELX_P4 4 THR F 11 ? ASN F 25 ? THR B 9 ASN B 23 1 ? 15 HELX_P HELX_P5 5 SER F 29 ? ASN F 41 ? SER B 27 ASN B 39 1 ? 13 HELX_P HELX_P6 6 ARG F 45 ? TRP F 58 ? ARG B 43 TRP B 56 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 15 N3 ? ? C DG 101 D DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 15 O2 ? ? C DG 101 D DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 15 N4 ? ? C DG 101 D DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 102 D DT 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 102 D DT 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 103 D DT 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 103 D DT 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 104 D DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 104 D DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 11 N1 ? ? C DC 105 D DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 11 O6 ? ? C DC 105 D DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 11 N2 ? ? C DC 105 D DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 106 D DA 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 106 D DA 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? C DC 107 D DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? C DC 107 D DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? C DC 107 D DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 108 D DT 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 108 D DT 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 7 N1 ? ? C DT 109 D DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 7 N6 ? ? C DT 109 D DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 6 N1 ? ? C DT 110 D DA 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 6 N6 ? ? C DT 110 D DA 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 111 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 111 D DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 112 D DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 112 D DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 112 D DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? C DA 113 D DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? C DA 113 D DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 114 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 114 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 114 D DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 15 N3 ? ? E DG 101 F DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 15 O2 ? ? E DG 101 F DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 15 N4 ? ? E DG 101 F DC 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 14 N3 ? ? E DA 102 F DT 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 14 O4 ? ? E DA 102 F DT 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 13 N3 ? ? E DA 103 F DT 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 13 O4 ? ? E DA 103 F DT 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? E DA 104 F DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? E DA 104 F DT 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 11 N1 ? ? E DC 105 F DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 11 O6 ? ? E DC 105 F DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 11 N2 ? ? E DC 105 F DG 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 10 N1 ? ? E DT 106 F DA 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 10 N6 ? ? E DT 106 F DA 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? E DC 107 F DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? E DC 107 F DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? E DC 107 F DG 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 8 N3 ? ? E DA 108 F DT 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 8 O4 ? ? E DA 108 F DT 221 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 7 N1 ? ? E DT 109 F DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 7 N6 ? ? E DT 109 F DA 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 6 N1 ? ? E DT 110 F DA 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 6 N6 ? ? E DT 110 F DA 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 5 N3 ? ? E DA 111 F DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 5 O4 ? ? E DA 111 F DT 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C DG 13 N1 ? ? ? 1_555 D DC 4 N3 ? ? E DG 112 F DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C DG 13 N2 ? ? ? 1_555 D DC 4 O2 ? ? E DG 112 F DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C DG 13 O6 ? ? ? 1_555 D DC 4 N4 ? ? E DG 112 F DC 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 3 N3 ? ? E DA 113 F DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 3 O4 ? ? E DA 113 F DT 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? C DG 15 N1 ? ? ? 1_555 D DC 2 N3 ? ? E DG 114 F DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? C DG 15 N2 ? ? ? 1_555 D DC 2 O2 ? ? E DG 114 F DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? C DG 15 O6 ? ? ? 1_555 D DC 2 N4 ? ? E DG 114 F DC 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2H1K _atom_sites.fract_transf_matrix[1][1] 0.017158 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016148 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010369 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 100 100 DA A C . n A 1 2 DG 2 101 101 DG G C . n A 1 3 DA 3 102 102 DA A C . n A 1 4 DA 4 103 103 DA A C . n A 1 5 DA 5 104 104 DA A C . n A 1 6 DC 6 105 105 DC C C . n A 1 7 DT 7 106 106 DT T C . n A 1 8 DC 8 107 107 DC C C . n A 1 9 DA 9 108 108 DA A C . n A 1 10 DT 10 109 109 DT T C . n A 1 11 DT 11 110 110 DT T C . n A 1 12 DA 12 111 111 DA A C . n A 1 13 DG 13 112 112 DG G C . n A 1 14 DA 14 113 113 DA A C . n A 1 15 DG 15 114 114 DG G C . n B 2 1 DT 1 214 214 DT T D . n B 2 2 DC 2 215 215 DC C D . n B 2 3 DT 3 216 216 DT T D . n B 2 4 DC 4 217 217 DC C D . n B 2 5 DT 5 218 218 DT T D . n B 2 6 DA 6 219 219 DA A D . n B 2 7 DA 7 220 220 DA A D . n B 2 8 DT 8 221 221 DT T D . n B 2 9 DG 9 222 222 DG G D . n B 2 10 DA 10 223 223 DA A D . n B 2 11 DG 11 224 224 DG G D . n B 2 12 DT 12 225 225 DT T D . n B 2 13 DT 13 226 226 DT T D . n B 2 14 DT 14 227 227 DT T D . n B 2 15 DC 15 228 228 DC C D . n C 1 1 DA 1 100 100 DA A E . n C 1 2 DG 2 101 101 DG G E . n C 1 3 DA 3 102 102 DA A E . n C 1 4 DA 4 103 103 DA A E . n C 1 5 DA 5 104 104 DA A E . n C 1 6 DC 6 105 105 DC C E . n C 1 7 DT 7 106 106 DT T E . n C 1 8 DC 8 107 107 DC C E . n C 1 9 DA 9 108 108 DA A E . n C 1 10 DT 10 109 109 DT T E . n C 1 11 DT 11 110 110 DT T E . n C 1 12 DA 12 111 111 DA A E . n C 1 13 DG 13 112 112 DG G E . n C 1 14 DA 14 113 113 DA A E . n C 1 15 DG 15 114 114 DG G E . n D 2 1 DT 1 214 214 DT T F . n D 2 2 DC 2 215 215 DC C F . n D 2 3 DT 3 216 216 DT T F . n D 2 4 DC 4 217 217 DC C F . n D 2 5 DT 5 218 218 DT T F . n D 2 6 DA 6 219 219 DA A F . n D 2 7 DA 7 220 220 DA A F . n D 2 8 DT 8 221 221 DT T F . n D 2 9 DG 9 222 222 DG G F . n D 2 10 DA 10 223 223 DA A F . n D 2 11 DG 11 224 224 DG G F . n D 2 12 DT 12 225 225 DT T F . n D 2 13 DT 13 226 226 DT T F . n D 2 14 DT 14 227 227 DT T F . n D 2 15 DC 15 228 228 DC C F . n E 3 1 GLY 1 -1 ? ? ? A . n E 3 2 SER 2 0 ? ? ? A . n E 3 3 ASN 3 1 ? ? ? A . n E 3 4 LYS 4 2 ? ? ? A . n E 3 5 ARG 5 3 3 ARG ALA A . n E 3 6 THR 6 4 4 THR THR A . n E 3 7 ARG 7 5 5 ARG ARG A . n E 3 8 THR 8 6 6 THR THR A . n E 3 9 ALA 9 7 7 ALA ALA A . n E 3 10 TYR 10 8 8 TYR TYR A . n E 3 11 THR 11 9 9 THR THR A . n E 3 12 ARG 12 10 10 ARG ALA A . n E 3 13 ALA 13 11 11 ALA ALA A . n E 3 14 GLN 14 12 12 GLN GLN A . n E 3 15 LEU 15 13 13 LEU LEU A . n E 3 16 LEU 16 14 14 LEU LEU A . n E 3 17 GLU 17 15 15 GLU GLU A . n E 3 18 LEU 18 16 16 LEU LEU A . n E 3 19 GLU 19 17 17 GLU GLU A . n E 3 20 LYS 20 18 18 LYS LYS A . n E 3 21 GLU 21 19 19 GLU GLU A . n E 3 22 PHE 22 20 20 PHE PHE A . n E 3 23 LEU 23 21 21 LEU LEU A . n E 3 24 PHE 24 22 22 PHE PHE A . n E 3 25 ASN 25 23 23 ASN ASN A . n E 3 26 LYS 26 24 24 LYS LYS A . n E 3 27 TYR 27 25 25 TYR TYR A . n E 3 28 ILE 28 26 26 ILE ILE A . n E 3 29 SER 29 27 27 SER SER A . n E 3 30 ARG 30 28 28 ARG ARG A . n E 3 31 PRO 31 29 29 PRO PRO A . n E 3 32 ARG 32 30 30 ARG ARG A . n E 3 33 ARG 33 31 31 ARG ARG A . n E 3 34 VAL 34 32 32 VAL VAL A . n E 3 35 GLU 35 33 33 GLU GLU A . n E 3 36 LEU 36 34 34 LEU LEU A . n E 3 37 ALA 37 35 35 ALA ALA A . n E 3 38 VAL 38 36 36 VAL VAL A . n E 3 39 MET 39 37 37 MET MET A . n E 3 40 LEU 40 38 38 LEU LEU A . n E 3 41 ASN 41 39 39 ASN ASN A . n E 3 42 LEU 42 40 40 LEU LEU A . n E 3 43 THR 43 41 41 THR THR A . n E 3 44 GLU 44 42 42 GLU GLU A . n E 3 45 ARG 45 43 43 ARG ALA A . n E 3 46 HIS 46 44 44 HIS HIS A . n E 3 47 ILE 47 45 45 ILE ILE A . n E 3 48 LYS 48 46 46 LYS LYS A . n E 3 49 ILE 49 47 47 ILE ILE A . n E 3 50 TRP 50 48 48 TRP TRP A . n E 3 51 PHE 51 49 49 PHE PHE A . n E 3 52 GLN 52 50 50 GLN GLN A . n E 3 53 ASN 53 51 51 ASN ASN A . n E 3 54 ARG 54 52 52 ARG ARG A . n E 3 55 ARG 55 53 53 ARG ARG A . n E 3 56 MET 56 54 54 MET MET A . n E 3 57 LYS 57 55 55 LYS LYS A . n E 3 58 TRP 58 56 56 TRP TRP A . n E 3 59 LYS 59 57 57 LYS LYS A . n E 3 60 LYS 60 58 58 LYS LYS A . n E 3 61 GLU 61 59 59 GLU ALA A . n E 3 62 GLU 62 60 60 GLU ALA A . n E 3 63 ASP 63 61 ? ? ? A . n F 3 1 GLY 1 -1 ? ? ? B . n F 3 2 SER 2 0 ? ? ? B . n F 3 3 ASN 3 1 1 ASN ALA B . n F 3 4 LYS 4 2 2 LYS LYS B . n F 3 5 ARG 5 3 3 ARG ARG B . n F 3 6 THR 6 4 4 THR THR B . n F 3 7 ARG 7 5 5 ARG ARG B . n F 3 8 THR 8 6 6 THR THR B . n F 3 9 ALA 9 7 7 ALA ALA B . n F 3 10 TYR 10 8 8 TYR TYR B . n F 3 11 THR 11 9 9 THR THR B . n F 3 12 ARG 12 10 10 ARG ARG B . n F 3 13 ALA 13 11 11 ALA ALA B . n F 3 14 GLN 14 12 12 GLN GLN B . n F 3 15 LEU 15 13 13 LEU LEU B . n F 3 16 LEU 16 14 14 LEU LEU B . n F 3 17 GLU 17 15 15 GLU GLU B . n F 3 18 LEU 18 16 16 LEU LEU B . n F 3 19 GLU 19 17 17 GLU GLU B . n F 3 20 LYS 20 18 18 LYS LYS B . n F 3 21 GLU 21 19 19 GLU GLU B . n F 3 22 PHE 22 20 20 PHE PHE B . n F 3 23 LEU 23 21 21 LEU LEU B . n F 3 24 PHE 24 22 22 PHE PHE B . n F 3 25 ASN 25 23 23 ASN ASN B . n F 3 26 LYS 26 24 24 LYS LYS B . n F 3 27 TYR 27 25 25 TYR TYR B . n F 3 28 ILE 28 26 26 ILE ILE B . n F 3 29 SER 29 27 27 SER SER B . n F 3 30 ARG 30 28 28 ARG ARG B . n F 3 31 PRO 31 29 29 PRO PRO B . n F 3 32 ARG 32 30 30 ARG ARG B . n F 3 33 ARG 33 31 31 ARG ARG B . n F 3 34 VAL 34 32 32 VAL VAL B . n F 3 35 GLU 35 33 33 GLU GLU B . n F 3 36 LEU 36 34 34 LEU LEU B . n F 3 37 ALA 37 35 35 ALA ALA B . n F 3 38 VAL 38 36 36 VAL VAL B . n F 3 39 MET 39 37 37 MET MET B . n F 3 40 LEU 40 38 38 LEU LEU B . n F 3 41 ASN 41 39 39 ASN ASN B . n F 3 42 LEU 42 40 40 LEU LEU B . n F 3 43 THR 43 41 41 THR THR B . n F 3 44 GLU 44 42 42 GLU ALA B . n F 3 45 ARG 45 43 43 ARG ARG B . n F 3 46 HIS 46 44 44 HIS HIS B . n F 3 47 ILE 47 45 45 ILE ILE B . n F 3 48 LYS 48 46 46 LYS LYS B . n F 3 49 ILE 49 47 47 ILE ILE B . n F 3 50 TRP 50 48 48 TRP TRP B . n F 3 51 PHE 51 49 49 PHE PHE B . n F 3 52 GLN 52 50 50 GLN GLN B . n F 3 53 ASN 53 51 51 ASN ASN B . n F 3 54 ARG 54 52 52 ARG ARG B . n F 3 55 ARG 55 53 53 ARG ARG B . n F 3 56 MET 56 54 54 MET MET B . n F 3 57 LYS 57 55 55 LYS LYS B . n F 3 58 TRP 58 56 56 TRP TRP B . n F 3 59 LYS 59 57 57 LYS ALA B . n F 3 60 LYS 60 58 58 LYS ALA B . n F 3 61 GLU 61 59 59 GLU ALA B . n F 3 62 GLU 62 60 60 GLU ALA B . n F 3 63 ASP 63 61 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 HOH 1 4 4 HOH HOH C . G 4 HOH 2 5 5 HOH HOH C . G 4 HOH 3 8 8 HOH HOH C . G 4 HOH 4 11 11 HOH HOH C . H 4 HOH 1 3 3 HOH HOH D . H 4 HOH 2 6 6 HOH HOH D . H 4 HOH 3 7 7 HOH HOH D . H 4 HOH 4 9 9 HOH HOH D . I 4 HOH 1 23 23 HOH HOH E . I 4 HOH 2 25 25 HOH HOH E . J 4 HOH 1 27 27 HOH HOH F . J 4 HOH 2 28 28 HOH HOH F . J 4 HOH 3 29 29 HOH HOH F . K 4 HOH 1 62 1 HOH HOH A . K 4 HOH 2 63 2 HOH HOH A . K 4 HOH 3 64 10 HOH HOH A . K 4 HOH 4 65 12 HOH HOH A . K 4 HOH 5 66 13 HOH HOH A . K 4 HOH 6 67 24 HOH HOH A . L 4 HOH 1 62 21 HOH HOH B . L 4 HOH 2 63 22 HOH HOH B . L 4 HOH 3 64 26 HOH HOH B . L 4 HOH 4 65 30 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H,K 2 1 C,D,F,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-20 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' . ? 1 MOSFLM 'data reduction' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 103 ? ? "C1'" C DA 103 ? ? N9 C DA 103 ? ? 110.65 108.30 2.35 0.30 N 2 1 "O4'" C DA 104 ? ? "C1'" C DA 104 ? ? N9 C DA 104 ? ? 110.16 108.30 1.86 0.30 N 3 1 "O4'" C DT 110 ? ? "C1'" C DT 110 ? ? N1 C DT 110 ? ? 110.16 108.30 1.86 0.30 N 4 1 N9 C DA 111 ? ? "C1'" C DA 111 ? ? "C2'" C DA 111 ? ? 122.93 114.30 8.63 1.40 N 5 1 "O4'" C DA 111 ? ? "C1'" C DA 111 ? ? N9 C DA 111 ? ? 110.70 108.30 2.40 0.30 N 6 1 N1 D DT 218 ? ? "C1'" D DT 218 ? ? "C2'" D DT 218 ? ? 123.55 114.30 9.25 1.40 N 7 1 "O4'" F DG 224 ? ? "C1'" F DG 224 ? ? N9 F DG 224 ? ? 110.87 108.30 2.57 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 4 ? ? -102.76 -113.05 2 1 ARG A 5 ? ? -168.70 103.33 3 1 ASN A 39 ? ? 62.36 67.97 4 1 LYS B 58 ? ? -61.17 19.91 5 1 GLU B 59 ? ? -162.60 -95.00 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 105 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.070 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 3 ? CG ? E ARG 5 CG 2 1 Y 1 A ARG 3 ? CD ? E ARG 5 CD 3 1 Y 1 A ARG 3 ? NE ? E ARG 5 NE 4 1 Y 1 A ARG 3 ? CZ ? E ARG 5 CZ 5 1 Y 1 A ARG 3 ? NH1 ? E ARG 5 NH1 6 1 Y 1 A ARG 3 ? NH2 ? E ARG 5 NH2 7 1 Y 1 A ARG 10 ? CG ? E ARG 12 CG 8 1 Y 1 A ARG 10 ? CD ? E ARG 12 CD 9 1 Y 1 A ARG 10 ? NE ? E ARG 12 NE 10 1 Y 1 A ARG 10 ? CZ ? E ARG 12 CZ 11 1 Y 1 A ARG 10 ? NH1 ? E ARG 12 NH1 12 1 Y 1 A ARG 10 ? NH2 ? E ARG 12 NH2 13 1 Y 1 A ARG 43 ? CG ? E ARG 45 CG 14 1 Y 1 A ARG 43 ? CD ? E ARG 45 CD 15 1 Y 1 A ARG 43 ? NE ? E ARG 45 NE 16 1 Y 1 A ARG 43 ? CZ ? E ARG 45 CZ 17 1 Y 1 A ARG 43 ? NH1 ? E ARG 45 NH1 18 1 Y 1 A ARG 43 ? NH2 ? E ARG 45 NH2 19 1 Y 1 A GLU 59 ? CG ? E GLU 61 CG 20 1 Y 1 A GLU 59 ? CD ? E GLU 61 CD 21 1 Y 1 A GLU 59 ? OE1 ? E GLU 61 OE1 22 1 Y 1 A GLU 59 ? OE2 ? E GLU 61 OE2 23 1 Y 1 A GLU 60 ? CG ? E GLU 62 CG 24 1 Y 1 A GLU 60 ? CD ? E GLU 62 CD 25 1 Y 1 A GLU 60 ? OE1 ? E GLU 62 OE1 26 1 Y 1 A GLU 60 ? OE2 ? E GLU 62 OE2 27 1 Y 1 B ASN 1 ? CG ? F ASN 3 CG 28 1 Y 1 B ASN 1 ? OD1 ? F ASN 3 OD1 29 1 Y 1 B ASN 1 ? ND2 ? F ASN 3 ND2 30 1 Y 1 B GLU 42 ? CG ? F GLU 44 CG 31 1 Y 1 B GLU 42 ? CD ? F GLU 44 CD 32 1 Y 1 B GLU 42 ? OE1 ? F GLU 44 OE1 33 1 Y 1 B GLU 42 ? OE2 ? F GLU 44 OE2 34 1 Y 1 B LYS 57 ? CG ? F LYS 59 CG 35 1 Y 1 B LYS 57 ? CD ? F LYS 59 CD 36 1 Y 1 B LYS 57 ? CE ? F LYS 59 CE 37 1 Y 1 B LYS 57 ? NZ ? F LYS 59 NZ 38 1 Y 1 B LYS 58 ? CG ? F LYS 60 CG 39 1 Y 1 B LYS 58 ? CD ? F LYS 60 CD 40 1 Y 1 B LYS 58 ? CE ? F LYS 60 CE 41 1 Y 1 B LYS 58 ? NZ ? F LYS 60 NZ 42 1 Y 1 B GLU 59 ? CG ? F GLU 61 CG 43 1 Y 1 B GLU 59 ? CD ? F GLU 61 CD 44 1 Y 1 B GLU 59 ? OE1 ? F GLU 61 OE1 45 1 Y 1 B GLU 59 ? OE2 ? F GLU 61 OE2 46 1 Y 1 B GLU 60 ? CG ? F GLU 62 CG 47 1 Y 1 B GLU 60 ? CD ? F GLU 62 CD 48 1 Y 1 B GLU 60 ? OE1 ? F GLU 62 OE1 49 1 Y 1 B GLU 60 ? OE2 ? F GLU 62 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? E GLY 1 2 1 Y 1 A SER 0 ? E SER 2 3 1 Y 1 A ASN 1 ? E ASN 3 4 1 Y 1 A LYS 2 ? E LYS 4 5 1 Y 1 A ASP 61 ? E ASP 63 6 1 Y 1 B GLY -1 ? F GLY 1 7 1 Y 1 B SER 0 ? F SER 2 8 1 Y 1 B ASP 61 ? F ASP 63 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 # _ndb_struct_conf_na.entry_id 2H1K _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 15 1_555 -0.043 -0.112 -0.505 0.006 -3.431 -2.326 1 C_DG101:DC228_D C 101 ? D 228 ? 19 1 1 A DA 3 1_555 B DT 14 1_555 -0.010 -0.089 -0.114 3.370 -4.132 -2.525 2 C_DA102:DT227_D C 102 ? D 227 ? 20 1 1 A DA 4 1_555 B DT 13 1_555 0.023 -0.152 0.073 7.947 -9.888 0.495 3 C_DA103:DT226_D C 103 ? D 226 ? 20 1 1 A DA 5 1_555 B DT 12 1_555 0.186 0.023 0.040 9.923 -8.754 -0.873 4 C_DA104:DT225_D C 104 ? D 225 ? 20 1 1 A DC 6 1_555 B DG 11 1_555 0.025 -0.080 -0.220 2.798 -14.509 5.224 5 C_DC105:DG224_D C 105 ? D 224 ? 19 1 1 A DT 7 1_555 B DA 10 1_555 -0.164 -0.070 0.052 -6.307 -14.069 -2.210 6 C_DT106:DA223_D C 106 ? D 223 ? 20 1 1 A DC 8 1_555 B DG 9 1_555 0.127 -0.225 -0.122 1.702 -10.525 1.507 7 C_DC107:DG222_D C 107 ? D 222 ? 19 1 1 A DA 9 1_555 B DT 8 1_555 0.201 0.038 0.189 -1.999 -7.133 -6.029 8 C_DA108:DT221_D C 108 ? D 221 ? 20 1 1 A DT 10 1_555 B DA 7 1_555 0.139 0.051 0.007 3.112 -9.165 2.623 9 C_DT109:DA220_D C 109 ? D 220 ? 20 1 1 A DT 11 1_555 B DA 6 1_555 -0.225 0.030 -0.037 3.903 -17.266 2.206 10 C_DT110:DA219_D C 110 ? D 219 ? 20 1 1 A DA 12 1_555 B DT 5 1_555 -0.095 -0.083 -0.373 -6.952 -6.942 1.011 11 C_DA111:DT218_D C 111 ? D 218 ? 20 1 1 A DG 13 1_555 B DC 4 1_555 -0.098 -0.066 0.017 -2.861 -4.309 -1.211 12 C_DG112:DC217_D C 112 ? D 217 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 0.064 -0.142 -0.089 3.660 -1.359 -2.691 13 C_DA113:DT216_D C 113 ? D 216 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 -0.214 -0.024 -0.117 0.691 -9.840 0.937 14 C_DG114:DC215_D C 114 ? D 215 ? 19 1 1 C DG 2 1_555 D DC 15 1_555 -0.118 -0.091 -0.361 -0.786 0.931 -2.564 15 E_DG101:DC228_F E 101 ? F 228 ? 19 1 1 C DA 3 1_555 D DT 14 1_555 -0.033 0.036 -0.122 19.390 -26.625 3.220 16 E_DA102:DT227_F E 102 ? F 227 ? 20 1 1 C DA 4 1_555 D DT 13 1_555 0.336 0.137 0.457 18.696 -19.668 -5.788 17 E_DA103:DT226_F E 103 ? F 226 ? 20 1 1 C DA 5 1_555 D DT 12 1_555 0.069 0.043 0.154 5.306 -18.468 0.743 18 E_DA104:DT225_F E 104 ? F 225 ? 20 1 1 C DC 6 1_555 D DG 11 1_555 0.028 0.018 0.096 0.355 -13.585 0.338 19 E_DC105:DG224_F E 105 ? F 224 ? 19 1 1 C DT 7 1_555 D DA 10 1_555 -0.139 0.160 0.077 -5.417 -13.445 -7.195 20 E_DT106:DA223_F E 106 ? F 223 ? 20 1 1 C DC 8 1_555 D DG 9 1_555 -0.043 -0.122 0.117 -12.138 -5.313 0.347 21 E_DC107:DG222_F E 107 ? F 222 ? 19 1 1 C DA 9 1_555 D DT 8 1_555 0.124 -0.004 0.064 5.642 -12.283 0.313 22 E_DA108:DT221_F E 108 ? F 221 ? 20 1 1 C DT 10 1_555 D DA 7 1_555 -0.168 -0.080 -0.028 -0.259 -12.925 9.437 23 E_DT109:DA220_F E 109 ? F 220 ? 20 1 1 C DT 11 1_555 D DA 6 1_555 0.128 -0.103 -0.164 2.932 -16.548 3.863 24 E_DT110:DA219_F E 110 ? F 219 ? 20 1 1 C DA 12 1_555 D DT 5 1_555 -0.004 0.064 -0.298 -11.069 -0.876 4.033 25 E_DA111:DT218_F E 111 ? F 218 ? 20 1 1 C DG 13 1_555 D DC 4 1_555 0.003 0.134 -0.015 -9.293 -9.735 0.342 26 E_DG112:DC217_F E 112 ? F 217 ? 19 1 1 C DA 14 1_555 D DT 3 1_555 0.170 0.126 0.096 -1.626 -4.083 -5.089 27 E_DA113:DT216_F E 113 ? F 216 ? 20 1 1 C DG 15 1_555 D DC 2 1_555 -0.125 0.005 0.004 4.448 -13.381 -0.745 28 E_DG114:DC215_F E 114 ? F 215 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 15 1_555 A DA 3 1_555 B DT 14 1_555 -0.252 0.508 3.260 -5.263 5.142 32.746 0.024 -0.440 3.299 8.979 9.191 33.540 1 CC_DG101DA102:DT227DC228_DD C 101 ? D 228 ? C 102 ? D 227 ? 1 A DA 3 1_555 B DT 14 1_555 A DA 4 1_555 B DT 13 1_555 0.212 -0.132 3.103 -0.436 -0.405 31.555 -0.172 -0.466 3.101 -0.744 0.801 31.560 2 CC_DA102DA103:DT226DT227_DD C 102 ? D 227 ? C 103 ? D 226 ? 1 A DA 4 1_555 B DT 13 1_555 A DA 5 1_555 B DT 12 1_555 0.399 -0.541 3.141 2.527 3.744 37.027 -1.319 -0.304 3.094 5.868 -3.961 37.292 3 CC_DA103DA104:DT225DT226_DD C 103 ? D 226 ? C 104 ? D 225 ? 1 A DA 5 1_555 B DT 12 1_555 A DC 6 1_555 B DG 11 1_555 0.085 -0.956 3.465 0.032 -1.823 37.981 -1.221 -0.126 3.506 -2.800 -0.049 38.023 4 CC_DA104DC105:DG224DT225_DD C 104 ? D 225 ? C 105 ? D 224 ? 1 A DC 6 1_555 B DG 11 1_555 A DT 7 1_555 B DA 10 1_555 -0.727 -0.384 3.607 0.667 14.909 28.984 -3.495 1.423 3.036 27.599 -1.234 32.527 5 CC_DC105DT106:DA223DG224_DD C 105 ? D 224 ? C 106 ? D 223 ? 1 A DT 7 1_555 B DA 10 1_555 A DC 8 1_555 B DG 9 1_555 0.259 0.294 3.103 2.372 2.785 36.475 0.102 -0.101 3.126 4.436 -3.778 36.652 6 CC_DT106DC107:DG222DA223_DD C 106 ? D 223 ? C 107 ? D 222 ? 1 A DC 8 1_555 B DG 9 1_555 A DA 9 1_555 B DT 8 1_555 0.382 -0.210 3.294 -1.683 9.871 32.703 -1.915 -0.915 3.080 17.040 2.905 34.162 7 CC_DC107DA108:DT221DG222_DD C 107 ? D 222 ? C 108 ? D 221 ? 1 A DA 9 1_555 B DT 8 1_555 A DT 10 1_555 B DA 7 1_555 0.710 -0.802 3.248 2.740 0.883 29.565 -1.751 -0.809 3.274 1.724 -5.353 29.701 8 CC_DA108DT109:DA220DT221_DD C 108 ? D 221 ? C 109 ? D 220 ? 1 A DT 10 1_555 B DA 7 1_555 A DT 11 1_555 B DA 6 1_555 -0.311 -0.266 3.246 1.873 2.318 33.328 -0.839 0.845 3.199 4.031 -3.258 33.457 9 CC_DT109DT110:DA219DA220_DD C 109 ? D 220 ? C 110 ? D 219 ? 1 A DT 11 1_555 B DA 6 1_555 A DA 12 1_555 B DT 5 1_555 1.165 0.817 3.587 6.326 4.360 39.676 0.625 -0.877 3.787 6.351 -9.215 40.384 10 CC_DT110DA111:DT218DA219_DD C 110 ? D 219 ? C 111 ? D 218 ? 1 A DA 12 1_555 B DT 5 1_555 A DG 13 1_555 B DC 4 1_555 -1.305 0.257 3.173 -8.728 6.686 35.751 -0.504 0.857 3.381 10.586 13.820 37.351 11 CC_DA111DG112:DC217DT218_DD C 111 ? D 218 ? C 112 ? D 217 ? 1 A DG 13 1_555 B DC 4 1_555 A DA 14 1_555 B DT 3 1_555 0.135 -0.182 3.200 0.467 -0.478 31.802 -0.247 -0.162 3.204 -0.873 -0.853 31.809 12 CC_DG112DA113:DT216DC217_DD C 112 ? D 217 ? C 113 ? D 216 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 -0.446 0.281 3.416 -2.409 3.814 35.696 -0.117 0.362 3.449 6.191 3.910 35.971 13 CC_DA113DG114:DC215DT216_DD C 113 ? D 216 ? C 114 ? D 215 ? 1 C DG 2 1_555 D DC 15 1_555 C DA 3 1_555 D DT 14 1_555 -0.363 1.803 2.989 0.145 2.770 32.072 2.790 0.680 3.128 5.003 -0.262 32.189 14 EE_DG101DA102:DT227DC228_FF E 101 ? F 228 ? E 102 ? F 227 ? 1 C DA 3 1_555 D DT 14 1_555 C DA 4 1_555 D DT 13 1_555 0.115 0.694 3.216 -2.734 -5.849 44.515 1.419 -0.389 3.094 -7.672 3.587 44.957 15 EE_DA102DA103:DT226DT227_FF E 102 ? F 227 ? E 103 ? F 226 ? 1 C DA 4 1_555 D DT 13 1_555 C DA 5 1_555 D DT 12 1_555 0.693 -0.260 3.525 3.714 -4.381 36.496 0.236 -0.546 3.583 -6.942 -5.885 36.930 16 EE_DA103DA104:DT225DT226_FF E 103 ? F 226 ? E 104 ? F 225 ? 1 C DA 5 1_555 D DT 12 1_555 C DC 6 1_555 D DG 11 1_555 0.659 -1.231 3.271 -0.112 5.131 34.026 -2.861 -1.131 3.057 8.707 0.189 34.400 17 EE_DA104DC105:DG224DT225_FF E 104 ? F 225 ? E 105 ? F 224 ? 1 C DC 6 1_555 D DG 11 1_555 C DT 7 1_555 D DA 10 1_555 -0.821 -0.411 3.363 -0.203 5.310 34.534 -1.504 1.337 3.270 8.880 0.339 34.928 18 EE_DC105DT106:DA223DG224_FF E 105 ? F 224 ? E 106 ? F 223 ? 1 C DT 7 1_555 D DA 10 1_555 C DC 8 1_555 D DG 9 1_555 0.532 -0.074 3.439 -1.794 5.965 37.153 -0.925 -1.068 3.359 9.282 2.792 37.654 19 EE_DT106DC107:DG222DA223_FF E 106 ? F 223 ? E 107 ? F 222 ? 1 C DC 8 1_555 D DG 9 1_555 C DA 9 1_555 D DT 8 1_555 0.185 0.548 3.039 -0.485 1.839 30.040 0.704 -0.449 3.063 3.544 0.935 30.099 20 EE_DC107DA108:DT221DG222_FF E 107 ? F 222 ? E 108 ? F 221 ? 1 C DA 9 1_555 D DT 8 1_555 C DT 10 1_555 D DA 7 1_555 0.745 -1.121 3.453 0.168 7.024 30.039 -3.501 -1.367 3.121 13.323 -0.318 30.831 21 EE_DA108DT109:DA220DT221_FF E 108 ? F 221 ? E 109 ? F 220 ? 1 C DT 10 1_555 D DA 7 1_555 C DT 11 1_555 D DA 6 1_555 -0.470 -0.184 3.208 0.250 4.643 35.162 -0.967 0.807 3.155 7.644 -0.412 35.458 22 EE_DT109DT110:DA219DA220_FF E 109 ? F 220 ? E 110 ? F 219 ? 1 C DT 11 1_555 D DA 6 1_555 C DA 12 1_555 D DT 5 1_555 1.050 0.668 3.655 0.768 7.938 39.551 -0.053 -1.424 3.734 11.588 -1.122 40.316 23 EE_DT110DA111:DT218DA219_FF E 110 ? F 219 ? E 111 ? F 218 ? 1 C DA 12 1_555 D DT 5 1_555 C DG 13 1_555 D DC 4 1_555 -1.773 0.193 3.201 -7.696 6.714 34.860 -0.670 1.724 3.478 10.920 12.517 36.281 24 EE_DA111DG112:DC217DT218_FF E 111 ? F 218 ? E 112 ? F 217 ? 1 C DG 13 1_555 D DC 4 1_555 C DA 14 1_555 D DT 3 1_555 -0.283 0.269 3.219 -2.492 -0.280 32.564 0.527 0.077 3.229 -0.499 4.436 32.657 25 EE_DG112DA113:DT216DC217_FF E 112 ? F 217 ? E 113 ? F 216 ? 1 C DA 14 1_555 D DT 3 1_555 C DG 15 1_555 D DC 2 1_555 -0.710 0.480 3.216 -1.937 -2.012 37.123 1.015 0.859 3.219 -3.155 3.038 37.225 26 EE_DA113DG114:DC215DT216_FF E 113 ? F 216 ? E 114 ? F 215 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9ANT _pdbx_initial_refinement_model.details 'PDB Entry 9ANT' #