data_2H28 # _entry.id 2H28 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2H28 RCSB RCSB037837 WWPDB D_1000037837 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ER304 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2H28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-05-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arbing, M.' 1 'Su, M.' 2 'Benach, J.' 3 'Karpowich, N.K.' 4 'Jiang, M.' 5 'Xiao, R.' 6 'Cunningham, K.' 7 'Ma, L.-C.' 8 'Chen, C.X.' 9 'Acton, T.B.' 10 'Montelione, G.T.' 11 'Tong, L.' 12 'Hunt, J.F.' 13 'Northeast Structural Genomics Consortium (NESG)' 14 # _citation.id primary _citation.title ;Crystal Structures of Phd-Doc, HigA, and YeeU Establish Multiple Evolutionary Links between Microbial Growth-Regulating Toxin-Antitoxin Systems. ; _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 996 _citation.page_last 1010 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20696400 _citation.pdbx_database_id_DOI 10.1016/j.str.2010.04.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Arbing, M.A.' 1 primary 'Handelman, S.K.' 2 primary 'Kuzin, A.P.' 3 primary 'Verdon, G.' 4 primary 'Wang, C.' 5 primary 'Su, M.' 6 primary 'Rothenbacher, F.P.' 7 primary 'Abashidze, M.' 8 primary 'Liu, M.' 9 primary 'Hurley, J.M.' 10 primary 'Xiao, R.' 11 primary 'Acton, T.' 12 primary 'Inouye, M.' 13 primary 'Montelione, G.T.' 14 primary 'Woychik, N.A.' 15 primary 'Hunt, J.F.' 16 # _cell.length_a 54.216 _cell.length_b 45.310 _cell.length_c 60.185 _cell.angle_alpha 90 _cell.angle_beta 108.79 _cell.angle_gamma 90 _cell.entry_id 2H28 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 2H28 _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein yeeU' 14957.291 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLL(MSE)KQ LEL(MSE)LTSGELNPRHQHTVTLYAKGLTCKADTLSSCDYVYLAVYPTPE(MSE)KNLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSG ELNPRHQHTVTLYAKGLTCKADTLSSCDYVYLAVYPTPEMKNLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ER304 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 ASP n 1 4 THR n 1 5 LEU n 1 6 PRO n 1 7 GLY n 1 8 THR n 1 9 THR n 1 10 LEU n 1 11 PRO n 1 12 ASP n 1 13 ASP n 1 14 ASN n 1 15 HIS n 1 16 ASP n 1 17 ARG n 1 18 PRO n 1 19 TRP n 1 20 TRP n 1 21 GLY n 1 22 LEU n 1 23 PRO n 1 24 CYS n 1 25 THR n 1 26 VAL n 1 27 THR n 1 28 PRO n 1 29 CYS n 1 30 PHE n 1 31 GLY n 1 32 ALA n 1 33 ARG n 1 34 LEU n 1 35 VAL n 1 36 GLN n 1 37 GLU n 1 38 GLY n 1 39 ASN n 1 40 ARG n 1 41 LEU n 1 42 HIS n 1 43 TYR n 1 44 LEU n 1 45 ALA n 1 46 ASP n 1 47 ARG n 1 48 ALA n 1 49 GLY n 1 50 ILE n 1 51 ARG n 1 52 GLY n 1 53 LEU n 1 54 PHE n 1 55 SER n 1 56 ASP n 1 57 ALA n 1 58 ASP n 1 59 ALA n 1 60 TYR n 1 61 HIS n 1 62 LEU n 1 63 ASP n 1 64 GLN n 1 65 ALA n 1 66 PHE n 1 67 PRO n 1 68 LEU n 1 69 LEU n 1 70 MSE n 1 71 LYS n 1 72 GLN n 1 73 LEU n 1 74 GLU n 1 75 LEU n 1 76 MSE n 1 77 LEU n 1 78 THR n 1 79 SER n 1 80 GLY n 1 81 GLU n 1 82 LEU n 1 83 ASN n 1 84 PRO n 1 85 ARG n 1 86 HIS n 1 87 GLN n 1 88 HIS n 1 89 THR n 1 90 VAL n 1 91 THR n 1 92 LEU n 1 93 TYR n 1 94 ALA n 1 95 LYS n 1 96 GLY n 1 97 LEU n 1 98 THR n 1 99 CYS n 1 100 LYS n 1 101 ALA n 1 102 ASP n 1 103 THR n 1 104 LEU n 1 105 SER n 1 106 SER n 1 107 CYS n 1 108 ASP n 1 109 TYR n 1 110 VAL n 1 111 TYR n 1 112 LEU n 1 113 ALA n 1 114 VAL n 1 115 TYR n 1 116 PRO n 1 117 THR n 1 118 PRO n 1 119 GLU n 1 120 MSE n 1 121 LYS n 1 122 ASN n 1 123 LEU n 1 124 GLU n 1 125 HIS n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 HIS n 1 130 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene yeeU _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'K12 MG1655' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+ Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YEEU_ECOLI _struct_ref.pdbx_db_accession P76364 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H28 A 1 ? 122 ? P76364 1 ? 122 ? 1 122 2 1 2H28 B 1 ? 122 ? P76364 1 ? 122 ? 1 122 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2H28 MSE A 1 ? UNP P76364 MET 1 'MODIFIED RESIDUE' 1 1 1 2H28 MSE A 70 ? UNP P76364 MET 70 'MODIFIED RESIDUE' 70 2 1 2H28 MSE A 76 ? UNP P76364 MET 76 'MODIFIED RESIDUE' 76 3 1 2H28 MSE A 120 ? UNP P76364 MET 120 'MODIFIED RESIDUE' 120 4 1 2H28 LEU A 123 ? UNP P76364 ? ? 'CLONING ARTIFACT' 123 5 1 2H28 GLU A 124 ? UNP P76364 ? ? 'CLONING ARTIFACT' 124 6 1 2H28 HIS A 125 ? UNP P76364 ? ? 'CLONING ARTIFACT' 125 7 1 2H28 HIS A 126 ? UNP P76364 ? ? 'CLONING ARTIFACT' 126 8 1 2H28 HIS A 127 ? UNP P76364 ? ? 'CLONING ARTIFACT' 127 9 1 2H28 HIS A 128 ? UNP P76364 ? ? 'CLONING ARTIFACT' 128 10 1 2H28 HIS A 129 ? UNP P76364 ? ? 'CLONING ARTIFACT' 129 11 1 2H28 HIS A 130 ? UNP P76364 ? ? 'CLONING ARTIFACT' 130 12 2 2H28 MSE B 1 ? UNP P76364 MET 1 'MODIFIED RESIDUE' 1 13 2 2H28 MSE B 70 ? UNP P76364 MET 70 'MODIFIED RESIDUE' 70 14 2 2H28 MSE B 76 ? UNP P76364 MET 76 'MODIFIED RESIDUE' 76 15 2 2H28 MSE B 120 ? UNP P76364 MET 120 'MODIFIED RESIDUE' 120 16 2 2H28 LEU B 123 ? UNP P76364 ? ? 'CLONING ARTIFACT' 123 17 2 2H28 GLU B 124 ? UNP P76364 ? ? 'CLONING ARTIFACT' 124 18 2 2H28 HIS B 125 ? UNP P76364 ? ? 'CLONING ARTIFACT' 125 19 2 2H28 HIS B 126 ? UNP P76364 ? ? 'CLONING ARTIFACT' 126 20 2 2H28 HIS B 127 ? UNP P76364 ? ? 'CLONING ARTIFACT' 127 21 2 2H28 HIS B 128 ? UNP P76364 ? ? 'CLONING ARTIFACT' 128 22 2 2H28 HIS B 129 ? UNP P76364 ? ? 'CLONING ARTIFACT' 129 23 2 2H28 HIS B 130 ? UNP P76364 ? ? 'CLONING ARTIFACT' 130 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2H28 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Under oil' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'MOPS, 0.1M MgSO4, 20% PEG 4000, pH 7.0, Under oil, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-03-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97901 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97901 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A # _reflns.entry_id 2H28 _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 100.000 _reflns.number_obs 35928 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_netI_over_sigmaI 12.300 _reflns.pdbx_chi_squared 1.381 _reflns.pdbx_redundancy 2.200 _reflns.percent_possible_obs 96.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 35928 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.02 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.515 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.858 _reflns_shell.pdbx_redundancy 1.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 836 _reflns_shell.percent_possible_all 87.30 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2H28 _refine.ls_d_res_high 2.100 _refine.ls_d_res_low 40.000 _refine.pdbx_ls_sigma_F 2 _refine.ls_percent_reflns_obs 92.500 _refine.ls_number_reflns_obs 15145 _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.253 _refine.ls_percent_reflns_R_free 4.600 _refine.ls_number_reflns_R_free 746 _refine.B_iso_mean 46.833 _refine.solvent_model_param_bsol 63.020 _refine.aniso_B[1][1] 7.450 _refine.aniso_B[2][2] -7.671 _refine.aniso_B[3][3] 0.221 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.482 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 16380 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1689 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1786 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 40.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.754 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.858 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.948 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 4.456 2.500 ? 'X-RAY DIFFRACTION' ? c_bond_d ? 0.005567 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.32477 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.par ? 'X-RAY DIFFRACTION' 2 water_rep.param ? 'X-RAY DIFFRACTION' 3 ligands_xplor_par.txt ? 'X-RAY DIFFRACTION' 4 ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2H28 _struct.title 'Crystal structure of YeeU from E. coli. Northeast Structural Genomics target ER304' _struct.pdbx_descriptor 'Hypothetical protein yeeU' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H28 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;ER304, E. coli, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 44 ? ASP A 46 ? LEU A 44 ASP A 46 5 ? 3 HELX_P HELX_P2 2 SER A 55 ? GLY A 80 ? SER A 55 GLY A 80 1 ? 26 HELX_P HELX_P3 3 LEU B 44 ? ASP B 46 ? LEU B 44 ASP B 46 5 ? 3 HELX_P HELX_P4 4 SER B 55 ? GLY B 80 ? SER B 55 GLY B 80 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 69 C ? ? ? 1_555 A MSE 70 N ? ? A LEU 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 70 C ? ? ? 1_555 A LYS 71 N ? ? A MSE 70 A LYS 71 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A LEU 75 C ? ? ? 1_555 A MSE 76 N ? ? A LEU 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 76 C ? ? ? 1_555 A LEU 77 N ? ? A MSE 76 A LEU 77 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A GLU 119 C ? ? ? 1_555 A MSE 120 N ? ? A GLU 119 A MSE 120 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A MSE 120 C ? ? ? 1_555 A LYS 121 N ? ? A MSE 120 A LYS 121 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? D MG . MG ? ? ? 1_555 A HIS 86 O ? ? A MG 5001 A HIS 86 1_555 ? ? ? ? ? ? ? 3.002 ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 A HIS 88 O ? ? A MG 5001 A HIS 88 1_555 ? ? ? ? ? ? ? 2.665 ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 A ASP 102 OD1 ? ? A MG 5001 A ASP 102 1_555 ? ? ? ? ? ? ? 2.774 ? covale7 covale ? ? B LEU 69 C ? ? ? 1_555 B MSE 70 N ? ? B LEU 69 B MSE 70 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? B MSE 70 C ? ? ? 1_555 B LYS 71 N ? ? B MSE 70 B LYS 71 1_555 ? ? ? ? ? ? ? 1.330 ? covale9 covale ? ? B LEU 75 C ? ? ? 1_555 B MSE 76 N ? ? B LEU 75 B MSE 76 1_555 ? ? ? ? ? ? ? 1.330 ? covale10 covale ? ? B MSE 76 C ? ? ? 1_555 B LEU 77 N ? ? B MSE 76 B LEU 77 1_555 ? ? ? ? ? ? ? 1.325 ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 5002 A HOH 3014 1_555 ? ? ? ? ? ? ? 2.881 ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 B GLY 21 O ? ? B MG 5002 B GLY 21 1_555 ? ? ? ? ? ? ? 2.640 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 27 A . ? THR 27 A PRO 28 A ? PRO 28 A 1 -0.10 2 THR 27 B . ? THR 27 B PRO 28 B ? PRO 28 B 1 -0.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 3 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 40 ? HIS A 42 ? ARG A 40 HIS A 42 A 2 CYS A 29 ? GLU A 37 ? CYS A 29 GLU A 37 A 3 ALA A 48 ? ARG A 51 ? ALA A 48 ARG A 51 B 1 ARG A 40 ? HIS A 42 ? ARG A 40 HIS A 42 B 2 CYS A 29 ? GLU A 37 ? CYS A 29 GLU A 37 B 3 TYR A 109 ? PRO A 116 ? TYR A 109 PRO A 116 B 4 LEU A 97 ? ASP A 102 ? LEU A 97 ASP A 102 B 5 VAL A 90 ? ALA A 94 ? VAL A 90 ALA A 94 C 1 ARG B 40 ? HIS B 42 ? ARG B 40 HIS B 42 C 2 CYS B 29 ? GLU B 37 ? CYS B 29 GLU B 37 C 3 ALA B 48 ? ARG B 51 ? ALA B 48 ARG B 51 D 1 ARG B 40 ? HIS B 42 ? ARG B 40 HIS B 42 D 2 CYS B 29 ? GLU B 37 ? CYS B 29 GLU B 37 D 3 TYR B 109 ? PRO B 116 ? TYR B 109 PRO B 116 D 4 LEU B 97 ? ASP B 102 ? LEU B 97 ASP B 102 D 5 VAL B 90 ? ALA B 94 ? VAL B 90 ALA B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 42 ? O HIS A 42 N VAL A 35 ? N VAL A 35 A 2 3 N CYS A 29 ? N CYS A 29 O ARG A 51 ? O ARG A 51 B 1 2 O HIS A 42 ? O HIS A 42 N VAL A 35 ? N VAL A 35 B 2 3 N LEU A 34 ? N LEU A 34 O VAL A 110 ? O VAL A 110 B 3 4 O TYR A 111 ? O TYR A 111 N ASP A 102 ? N ASP A 102 B 4 5 O LEU A 97 ? O LEU A 97 N ALA A 94 ? N ALA A 94 C 1 2 O HIS B 42 ? O HIS B 42 N VAL B 35 ? N VAL B 35 C 2 3 N GLY B 31 ? N GLY B 31 O GLY B 49 ? O GLY B 49 D 1 2 O HIS B 42 ? O HIS B 42 N VAL B 35 ? N VAL B 35 D 2 3 N PHE B 30 ? N PHE B 30 O VAL B 114 ? O VAL B 114 D 3 4 O TYR B 111 ? O TYR B 111 N ASP B 102 ? N ASP B 102 D 4 5 O CYS B 99 ? O CYS B 99 N LEU B 92 ? N LEU B 92 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CL A 4001' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG A 5001' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG B 5002' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 6000' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL B 6001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PRO A 23 ? PRO A 23 . ? 1_555 ? 2 AC1 5 CYS A 24 ? CYS A 24 . ? 1_555 ? 3 AC1 5 ARG A 51 ? ARG A 51 . ? 1_555 ? 4 AC1 5 CYS B 24 ? CYS B 24 . ? 1_555 ? 5 AC1 5 ARG B 51 ? ARG B 51 . ? 1_555 ? 6 AC2 4 HIS A 86 ? HIS A 86 . ? 1_555 ? 7 AC2 4 HIS A 88 ? HIS A 88 . ? 1_555 ? 8 AC2 4 ASP A 102 ? ASP A 102 . ? 1_555 ? 9 AC2 4 THR A 103 ? THR A 103 . ? 1_555 ? 10 AC3 4 ARG A 51 ? ARG A 51 . ? 1_555 ? 11 AC3 4 HOH H . ? HOH A 3014 . ? 1_555 ? 12 AC3 4 TRP B 19 ? TRP B 19 . ? 1_555 ? 13 AC3 4 GLY B 21 ? GLY B 21 . ? 1_555 ? 14 AC4 6 THR A 25 ? THR A 25 . ? 1_555 ? 15 AC4 6 PRO B 23 ? PRO B 23 . ? 1_555 ? 16 AC4 6 CYS B 24 ? CYS B 24 . ? 1_555 ? 17 AC4 6 THR B 25 ? THR B 25 . ? 1_555 ? 18 AC4 6 VAL B 26 ? VAL B 26 . ? 1_555 ? 19 AC4 6 TYR B 115 ? TYR B 115 . ? 1_555 ? 20 AC5 6 TRP A 19 ? TRP A 19 . ? 1_555 ? 21 AC5 6 TRP A 20 ? TRP A 20 . ? 1_555 ? 22 AC5 6 GLY A 21 ? GLY A 21 . ? 1_555 ? 23 AC5 6 LEU A 104 ? LEU A 104 . ? 1_555 ? 24 AC5 6 TRP B 19 ? TRP B 19 . ? 1_555 ? 25 AC5 6 ARG B 51 ? ARG B 51 . ? 1_555 ? # _atom_sites.entry_id 2H28 _atom_sites.fract_transf_matrix[1][1] 0.018445 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006276 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022070 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017551 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 LEU 5 5 ? ? ? A . n A 1 6 PRO 6 6 ? ? ? A . n A 1 7 GLY 7 7 ? ? ? A . n A 1 8 THR 8 8 ? ? ? A . n A 1 9 THR 9 9 ? ? ? A . n A 1 10 LEU 10 10 ? ? ? A . n A 1 11 PRO 11 11 ? ? ? A . n A 1 12 ASP 12 12 ? ? ? A . n A 1 13 ASP 13 13 ? ? ? A . n A 1 14 ASN 14 14 ? ? ? A . n A 1 15 HIS 15 15 ? ? ? A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 TRP 20 20 20 TRP TRP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 HIS 42 42 42 HIS HIS A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 MSE 70 70 70 MSE MSE A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 MSE 76 76 76 MSE MSE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 CYS 99 99 99 CYS CYS A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 CYS 107 107 107 CYS CYS A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 MSE 120 120 120 MSE MSE A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 HIS 125 125 ? ? ? A . n A 1 126 HIS 126 126 ? ? ? A . n A 1 127 HIS 127 127 ? ? ? A . n A 1 128 HIS 128 128 ? ? ? A . n A 1 129 HIS 129 129 ? ? ? A . n A 1 130 HIS 130 130 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 ASP 3 3 ? ? ? B . n B 1 4 THR 4 4 ? ? ? B . n B 1 5 LEU 5 5 ? ? ? B . n B 1 6 PRO 6 6 ? ? ? B . n B 1 7 GLY 7 7 ? ? ? B . n B 1 8 THR 8 8 ? ? ? B . n B 1 9 THR 9 9 ? ? ? B . n B 1 10 LEU 10 10 ? ? ? B . n B 1 11 PRO 11 11 ? ? ? B . n B 1 12 ASP 12 12 ? ? ? B . n B 1 13 ASP 13 13 ? ? ? B . n B 1 14 ASN 14 14 ? ? ? B . n B 1 15 HIS 15 15 15 HIS HIS B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 TRP 19 19 19 TRP TRP B . n B 1 20 TRP 20 20 20 TRP TRP B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 CYS 24 24 24 CYS CYS B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 CYS 29 29 29 CYS CYS B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 GLN 36 36 36 GLN GLN B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 LEU 41 41 41 LEU LEU B . n B 1 42 HIS 42 42 42 HIS HIS B . n B 1 43 TYR 43 43 43 TYR TYR B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 ARG 47 47 47 ARG ARG B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 ARG 51 51 51 ARG ARG B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 SER 55 55 55 SER SER B . n B 1 56 ASP 56 56 56 ASP ASP B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 HIS 61 61 61 HIS HIS B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 ASP 63 63 63 ASP ASP B . n B 1 64 GLN 64 64 64 GLN GLN B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 PHE 66 66 66 PHE PHE B . n B 1 67 PRO 67 67 67 PRO PRO B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 MSE 70 70 70 MSE MSE B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 GLN 72 72 72 GLN GLN B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 MSE 76 76 76 MSE MSE B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 SER 79 79 79 SER SER B . n B 1 80 GLY 80 80 80 GLY GLY B . n B 1 81 GLU 81 81 81 GLU GLU B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 PRO 84 84 84 PRO PRO B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 HIS 88 88 88 HIS HIS B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 LEU 92 92 92 LEU LEU B . n B 1 93 TYR 93 93 93 TYR TYR B . n B 1 94 ALA 94 94 94 ALA ALA B . n B 1 95 LYS 95 95 95 LYS LYS B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 THR 98 98 98 THR THR B . n B 1 99 CYS 99 99 99 CYS CYS B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 ASP 102 102 102 ASP ASP B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 LEU 104 104 104 LEU LEU B . n B 1 105 SER 105 105 105 SER SER B . n B 1 106 SER 106 106 106 SER SER B . n B 1 107 CYS 107 107 107 CYS CYS B . n B 1 108 ASP 108 108 108 ASP ASP B . n B 1 109 TYR 109 109 109 TYR TYR B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 TYR 111 111 111 TYR TYR B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 ALA 113 113 113 ALA ALA B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 TYR 115 115 115 TYR TYR B . n B 1 116 PRO 116 116 116 PRO PRO B . n B 1 117 THR 117 117 117 THR THR B . n B 1 118 PRO 118 118 118 PRO PRO B . n B 1 119 GLU 119 119 ? ? ? B . n B 1 120 MSE 120 120 ? ? ? B . n B 1 121 LYS 121 121 ? ? ? B . n B 1 122 ASN 122 122 ? ? ? B . n B 1 123 LEU 123 123 ? ? ? B . n B 1 124 GLU 124 124 ? ? ? B . n B 1 125 HIS 125 125 ? ? ? B . n B 1 126 HIS 126 126 ? ? ? B . n B 1 127 HIS 127 127 ? ? ? B . n B 1 128 HIS 128 128 ? ? ? B . n B 1 129 HIS 129 129 ? ? ? B . n B 1 130 HIS 130 130 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 4001 4001 CL CL A . D 3 MG 1 5001 5001 MG MG A . E 3 MG 1 5002 5002 MG MG B . F 4 GOL 1 6000 6000 GOL GOL B . G 4 GOL 1 6001 6001 GOL GOL B . H 5 HOH 1 3002 3002 HOH HOH A . H 5 HOH 2 3005 3005 HOH HOH A . H 5 HOH 3 3008 3008 HOH HOH A . H 5 HOH 4 3010 3010 HOH HOH A . H 5 HOH 5 3013 3013 HOH HOH A . H 5 HOH 6 3014 3014 HOH HOH A . H 5 HOH 7 3016 3016 HOH HOH A . H 5 HOH 8 3018 3018 HOH HOH A . H 5 HOH 9 3020 3020 HOH HOH A . H 5 HOH 10 3021 3021 HOH HOH A . H 5 HOH 11 3022 3022 HOH HOH A . H 5 HOH 12 3023 3023 HOH HOH A . H 5 HOH 13 3024 3024 HOH HOH A . H 5 HOH 14 3025 3025 HOH HOH A . H 5 HOH 15 3029 3029 HOH HOH A . H 5 HOH 16 3031 3031 HOH HOH A . H 5 HOH 17 3035 3035 HOH HOH A . H 5 HOH 18 3040 3040 HOH HOH A . H 5 HOH 19 3041 3041 HOH HOH A . H 5 HOH 20 3042 3042 HOH HOH A . H 5 HOH 21 3044 3044 HOH HOH A . H 5 HOH 22 3048 3048 HOH HOH A . H 5 HOH 23 3049 3049 HOH HOH A . H 5 HOH 24 3054 3054 HOH HOH A . H 5 HOH 25 3055 3055 HOH HOH A . H 5 HOH 26 3056 3056 HOH HOH A . H 5 HOH 27 3058 3058 HOH HOH A . H 5 HOH 28 3063 3063 HOH HOH A . H 5 HOH 29 3064 3064 HOH HOH A . H 5 HOH 30 3065 3065 HOH HOH A . H 5 HOH 31 3067 3067 HOH HOH A . H 5 HOH 32 3068 3068 HOH HOH A . H 5 HOH 33 3069 3069 HOH HOH A . H 5 HOH 34 3072 3072 HOH HOH A . H 5 HOH 35 3073 3073 HOH HOH A . H 5 HOH 36 3075 3075 HOH HOH A . H 5 HOH 37 3076 3076 HOH HOH A . H 5 HOH 38 3077 3077 HOH HOH A . H 5 HOH 39 3079 3079 HOH HOH A . H 5 HOH 40 3080 3080 HOH HOH A . H 5 HOH 41 3081 3081 HOH HOH A . I 5 HOH 1 3001 3001 HOH HOH B . I 5 HOH 2 3003 3003 HOH HOH B . I 5 HOH 3 3004 3004 HOH HOH B . I 5 HOH 4 3006 3006 HOH HOH B . I 5 HOH 5 3007 3007 HOH HOH B . I 5 HOH 6 3009 3009 HOH HOH B . I 5 HOH 7 3011 3011 HOH HOH B . I 5 HOH 8 3012 3012 HOH HOH B . I 5 HOH 9 3015 3015 HOH HOH B . I 5 HOH 10 3017 3017 HOH HOH B . I 5 HOH 11 3019 3019 HOH HOH B . I 5 HOH 12 3026 3026 HOH HOH B . I 5 HOH 13 3027 3027 HOH HOH B . I 5 HOH 14 3028 3028 HOH HOH B . I 5 HOH 15 3030 3030 HOH HOH B . I 5 HOH 16 3032 3032 HOH HOH B . I 5 HOH 17 3033 3033 HOH HOH B . I 5 HOH 18 3034 3034 HOH HOH B . I 5 HOH 19 3036 3036 HOH HOH B . I 5 HOH 20 3037 3037 HOH HOH B . I 5 HOH 21 3038 3038 HOH HOH B . I 5 HOH 22 3039 3039 HOH HOH B . I 5 HOH 23 3043 3043 HOH HOH B . I 5 HOH 24 3045 3045 HOH HOH B . I 5 HOH 25 3046 3046 HOH HOH B . I 5 HOH 26 3047 3047 HOH HOH B . I 5 HOH 27 3050 3050 HOH HOH B . I 5 HOH 28 3051 3051 HOH HOH B . I 5 HOH 29 3052 3052 HOH HOH B . I 5 HOH 30 3053 3053 HOH HOH B . I 5 HOH 31 3057 3057 HOH HOH B . I 5 HOH 32 3059 3059 HOH HOH B . I 5 HOH 33 3060 3060 HOH HOH B . I 5 HOH 34 3061 3061 HOH HOH B . I 5 HOH 35 3062 3062 HOH HOH B . I 5 HOH 36 3066 3066 HOH HOH B . I 5 HOH 37 3070 3070 HOH HOH B . I 5 HOH 38 3071 3071 HOH HOH B . I 5 HOH 39 3074 3074 HOH HOH B . I 5 HOH 40 3078 3078 HOH HOH B . I 5 HOH 41 3082 3082 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 70 A MSE 70 ? MET SELENOMETHIONINE 2 A MSE 76 A MSE 76 ? MET SELENOMETHIONINE 3 A MSE 120 A MSE 120 ? MET SELENOMETHIONINE 4 B MSE 70 B MSE 70 ? MET SELENOMETHIONINE 5 B MSE 76 B MSE 76 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,H 2 1 B,E,F,G,I 3 1 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 2120 ? 3 MORE -39 ? 3 'SSA (A^2)' 11280 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A HIS 86 ? A HIS 86 ? 1_555 MG ? D MG . ? A MG 5001 ? 1_555 O ? A HIS 88 ? A HIS 88 ? 1_555 124.2 ? 2 O ? A HIS 86 ? A HIS 86 ? 1_555 MG ? D MG . ? A MG 5001 ? 1_555 OD1 ? A ASP 102 ? A ASP 102 ? 1_555 83.8 ? 3 O ? A HIS 88 ? A HIS 88 ? 1_555 MG ? D MG . ? A MG 5001 ? 1_555 OD1 ? A ASP 102 ? A ASP 102 ? 1_555 71.2 ? 4 O ? H HOH . ? A HOH 3014 ? 1_555 MG ? E MG . ? B MG 5002 ? 1_555 O ? B GLY 21 ? B GLY 21 ? 1_555 140.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-18 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.000 _diffrn_reflns.pdbx_d_res_low 100.000 _diffrn_reflns.pdbx_number_obs 35928 _diffrn_reflns.pdbx_Rmerge_I_obs 0.048 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.38 _diffrn_reflns.av_sigmaI_over_netI 12.30 _diffrn_reflns.pdbx_redundancy 2.20 _diffrn_reflns.pdbx_percent_possible_obs 96.90 _diffrn_reflns.number 79229 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 6.84 100.00 ? ? 0.029 ? 1.663 2.10 87.00 1 5.43 6.84 ? ? 0.035 ? 2.027 2.20 98.40 1 4.74 5.43 ? ? 0.034 ? 2.263 2.20 98.10 1 4.31 4.74 ? ? 0.036 ? 2.334 2.20 97.10 1 4.00 4.31 ? ? 0.039 ? 2.358 2.20 98.30 1 3.76 4.00 ? ? 0.041 ? 2.542 2.20 97.90 1 3.58 3.76 ? ? 0.041 ? 2.384 2.20 97.60 1 3.42 3.58 ? ? 0.042 ? 2.149 2.20 96.40 1 3.29 3.42 ? ? 0.047 ? 2.254 2.20 98.60 1 3.17 3.29 ? ? 0.049 ? 1.987 2.20 98.20 1 3.08 3.17 ? ? 0.049 ? 1.846 2.20 98.30 1 2.99 3.08 ? ? 0.056 ? 1.758 2.20 98.70 1 2.91 2.99 ? ? 0.056 ? 1.506 2.20 98.20 1 2.84 2.91 ? ? 0.060 ? 1.440 2.20 99.00 1 2.77 2.84 ? ? 0.064 ? 1.328 2.30 98.70 1 2.71 2.77 ? ? 0.066 ? 1.276 2.20 98.40 1 2.66 2.71 ? ? 0.077 ? 1.269 2.30 96.70 1 2.61 2.66 ? ? 0.079 ? 1.158 2.30 98.90 1 2.56 2.61 ? ? 0.081 ? 1.078 2.20 98.90 1 2.52 2.56 ? ? 0.098 ? 1.134 2.30 98.50 1 2.48 2.52 ? ? 0.107 ? 1.016 2.30 98.50 1 2.44 2.48 ? ? 0.101 ? 0.979 2.20 99.20 1 2.41 2.44 ? ? 0.122 ? 0.906 2.30 98.90 1 2.37 2.41 ? ? 0.134 ? 0.971 2.30 98.50 1 2.34 2.37 ? ? 0.138 ? 0.893 2.30 98.80 1 2.31 2.34 ? ? 0.149 ? 0.976 2.30 99.10 1 2.28 2.31 ? ? 0.163 ? 0.928 2.30 98.80 1 2.25 2.28 ? ? 0.202 ? 1.157 2.30 94.80 1 2.23 2.25 ? ? 0.226 ? 1.191 2.20 93.00 1 2.20 2.23 ? ? 0.214 ? 0.954 2.30 98.50 1 2.18 2.20 ? ? 0.224 ? 0.787 2.20 98.90 1 2.15 2.18 ? ? 0.220 ? 0.871 2.30 97.80 1 2.13 2.15 ? ? 0.285 ? 0.900 2.30 97.30 1 2.11 2.13 ? ? 0.294 ? 0.846 2.20 98.50 1 2.09 2.11 ? ? 0.350 ? 0.894 2.20 98.10 1 2.07 2.09 ? ? 0.431 ? 1.210 2.20 94.70 1 2.05 2.07 ? ? 0.446 ? 1.165 2.10 90.50 1 2.03 2.05 ? ? 0.537 ? 0.970 1.90 93.80 1 2.02 2.03 ? ? 0.547 ? 0.836 1.80 90.50 1 2.00 2.02 ? ? 0.515 ? 0.858 1.80 87.30 # _pdbx_phasing_dm.entry_id 2H28 _pdbx_phasing_dm.fom_acentric 0.550 _pdbx_phasing_dm.fom_centric 0.610 _pdbx_phasing_dm.fom 0.550 _pdbx_phasing_dm.reflns_acentric 14411 _pdbx_phasing_dm.reflns_centric 951 _pdbx_phasing_dm.reflns 15362 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.000 28.490 ? ? 0.950 0.850 0.930 576 118 694 3.800 6.000 ? ? 0.940 0.860 0.930 1964 204 2168 3.000 3.800 ? ? 0.840 0.800 0.840 2545 185 2730 2.600 3.000 ? ? 0.610 0.530 0.610 2553 145 2698 2.300 2.600 ? ? 0.330 0.310 0.320 4285 200 4485 2.100 2.300 ? ? 0.170 0.190 0.170 2488 99 2587 # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.08 14-Sept-2004 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE 2.08 14-Sept-2004 package 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC . ? ? ? ? 'data collection' ? ? ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 95 ? ? -33.64 99.70 2 1 ASP A 108 ? ? -176.24 -34.51 3 1 ASP B 108 ? ? -151.03 -24.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A LEU 5 ? A LEU 5 6 1 Y 1 A PRO 6 ? A PRO 6 7 1 Y 1 A GLY 7 ? A GLY 7 8 1 Y 1 A THR 8 ? A THR 8 9 1 Y 1 A THR 9 ? A THR 9 10 1 Y 1 A LEU 10 ? A LEU 10 11 1 Y 1 A PRO 11 ? A PRO 11 12 1 Y 1 A ASP 12 ? A ASP 12 13 1 Y 1 A ASP 13 ? A ASP 13 14 1 Y 1 A ASN 14 ? A ASN 14 15 1 Y 1 A HIS 15 ? A HIS 15 16 1 Y 1 A HIS 125 ? A HIS 125 17 1 Y 1 A HIS 126 ? A HIS 126 18 1 Y 1 A HIS 127 ? A HIS 127 19 1 Y 1 A HIS 128 ? A HIS 128 20 1 Y 1 A HIS 129 ? A HIS 129 21 1 Y 1 A HIS 130 ? A HIS 130 22 1 Y 1 B MSE 1 ? B MSE 1 23 1 Y 1 B SER 2 ? B SER 2 24 1 Y 1 B ASP 3 ? B ASP 3 25 1 Y 1 B THR 4 ? B THR 4 26 1 Y 1 B LEU 5 ? B LEU 5 27 1 Y 1 B PRO 6 ? B PRO 6 28 1 Y 1 B GLY 7 ? B GLY 7 29 1 Y 1 B THR 8 ? B THR 8 30 1 Y 1 B THR 9 ? B THR 9 31 1 Y 1 B LEU 10 ? B LEU 10 32 1 Y 1 B PRO 11 ? B PRO 11 33 1 Y 1 B ASP 12 ? B ASP 12 34 1 Y 1 B ASP 13 ? B ASP 13 35 1 Y 1 B ASN 14 ? B ASN 14 36 1 Y 1 B GLU 119 ? B GLU 119 37 1 Y 1 B MSE 120 ? B MSE 120 38 1 Y 1 B LYS 121 ? B LYS 121 39 1 Y 1 B ASN 122 ? B ASN 122 40 1 Y 1 B LEU 123 ? B LEU 123 41 1 Y 1 B GLU 124 ? B GLU 124 42 1 Y 1 B HIS 125 ? B HIS 125 43 1 Y 1 B HIS 126 ? B HIS 126 44 1 Y 1 B HIS 127 ? B HIS 127 45 1 Y 1 B HIS 128 ? B HIS 128 46 1 Y 1 B HIS 129 ? B HIS 129 47 1 Y 1 B HIS 130 ? B HIS 130 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'MAGNESIUM ION' MG 4 GLYCEROL GOL 5 water HOH #