data_2H5D # _entry.id 2H5D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2H5D pdb_00002h5d 10.2210/pdb2h5d/pdb RCSB RCSB037949 ? ? WWPDB D_1000037949 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1SSX 'same protein AT PH 8 (0.83A resolution)' unspecified PDB 1TAL 'same protein at pH 8 (1.5A resolution)' unspecified PDB 2ULL 'DATA FROM 1TAL WERE MODELED HERE WITH 16 CONFORMATIONS of the entire protein' unspecified PDB 1QRX 'same protein at pH 5.14 (1.6A resolution)' unspecified PDB 2H5C 'apo enzyme at pH 5 (0.82A resolution), another mimic of the transition states' unspecified PDB 1P03 '2.15A resolution structure of same protein bound to same inhibitor, without glycerol in the binding pocket' unspecified # _pdbx_database_status.entry_id 2H5D _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.recvd_initial_deposition_date 2006-05-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fuhrmann, C.N.' 1 'Agard, D.A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Subangstrom crystallography reveals that short ionic hydrogen bonds, and not a His-Asp low-barrier hydrogen bond, stabilize the transition state in serine protease catalysis ; J.Am.Chem.Soc. 128 9086 9102 2006 JACSAT US 0002-7863 0004 ? 16834383 10.1021/ja057721o 1 ;The 0.83A resolution crystal structure of alpha-lytic protease reveals the detailed structure of the active site and identifies a source of conformational strain ; J.Mol.Biol. 338 999 1013 2004 JMOBAK UK 0022-2836 0070 ? ? ? 2 'Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates' Biochemistry 28 7600 7609 1989 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fuhrmann, C.N.' 1 ? primary 'Daugherty, M.D.' 2 ? primary 'Agard, D.A.' 3 ? 1 'Fuhrmann, C.N.' 4 ? 1 'Kelch, B.A.' 5 ? 1 'Ota, N.' 6 ? 1 'Agard, D.A.' 7 ? 2 'Bone, R.' 8 ? 2 'Frank, D.' 9 ? 2 'Kettner, C.A.' 10 ? 2 'Agard, D.A.' 11 ? # _cell.entry_id 2H5D _cell.length_a 65.768 _cell.length_b 65.768 _cell.length_c 79.554 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2H5D _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ALPHA-LYTIC PROTEASE' 19875.131 1 3.4.21.12 ? 'MATURE PROTEASE DOMAIN (RESIDUES 200-397)' 'glycerol bound to the catalytic adduct, creating a mimic of the acylation transition state intermediate' 2 polymer syn 'MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID INHIBITOR' 470.325 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 8 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 432 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ALPHA-LYTIC ENDOPEPTIDASE' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.4.21.12 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVA NGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSG GNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; ;ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVA NGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSG GNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; A ? 2 'polypeptide(L)' no yes '(MSU)AAP(B2V)' XAAPV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASN n 1 3 ILE n 1 4 VAL n 1 5 GLY n 1 6 GLY n 1 7 ILE n 1 8 GLU n 1 9 TYR n 1 10 SER n 1 11 ILE n 1 12 ASN n 1 13 ASN n 1 14 ALA n 1 15 SER n 1 16 LEU n 1 17 CYS n 1 18 SER n 1 19 VAL n 1 20 GLY n 1 21 PHE n 1 22 SER n 1 23 VAL n 1 24 THR n 1 25 ARG n 1 26 GLY n 1 27 ALA n 1 28 THR n 1 29 LYS n 1 30 GLY n 1 31 PHE n 1 32 VAL n 1 33 THR n 1 34 ALA n 1 35 GLY n 1 36 HIS n 1 37 CYS n 1 38 GLY n 1 39 THR n 1 40 VAL n 1 41 ASN n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 ARG n 1 46 ILE n 1 47 GLY n 1 48 GLY n 1 49 ALA n 1 50 VAL n 1 51 VAL n 1 52 GLY n 1 53 THR n 1 54 PHE n 1 55 ALA n 1 56 ALA n 1 57 ARG n 1 58 VAL n 1 59 PHE n 1 60 PRO n 1 61 GLY n 1 62 ASN n 1 63 ASP n 1 64 ARG n 1 65 ALA n 1 66 TRP n 1 67 VAL n 1 68 SER n 1 69 LEU n 1 70 THR n 1 71 SER n 1 72 ALA n 1 73 GLN n 1 74 THR n 1 75 LEU n 1 76 LEU n 1 77 PRO n 1 78 ARG n 1 79 VAL n 1 80 ALA n 1 81 ASN n 1 82 GLY n 1 83 SER n 1 84 SER n 1 85 PHE n 1 86 VAL n 1 87 THR n 1 88 VAL n 1 89 ARG n 1 90 GLY n 1 91 SER n 1 92 THR n 1 93 GLU n 1 94 ALA n 1 95 ALA n 1 96 VAL n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 VAL n 1 101 CYS n 1 102 ARG n 1 103 SER n 1 104 GLY n 1 105 ARG n 1 106 THR n 1 107 THR n 1 108 GLY n 1 109 TYR n 1 110 GLN n 1 111 CYS n 1 112 GLY n 1 113 THR n 1 114 ILE n 1 115 THR n 1 116 ALA n 1 117 LYS n 1 118 ASN n 1 119 VAL n 1 120 THR n 1 121 ALA n 1 122 ASN n 1 123 TYR n 1 124 ALA n 1 125 GLU n 1 126 GLY n 1 127 ALA n 1 128 VAL n 1 129 ARG n 1 130 GLY n 1 131 LEU n 1 132 THR n 1 133 GLN n 1 134 GLY n 1 135 ASN n 1 136 ALA n 1 137 CYS n 1 138 MET n 1 139 GLY n 1 140 ARG n 1 141 GLY n 1 142 ASP n 1 143 SER n 1 144 GLY n 1 145 GLY n 1 146 SER n 1 147 TRP n 1 148 ILE n 1 149 THR n 1 150 SER n 1 151 ALA n 1 152 GLY n 1 153 GLN n 1 154 ALA n 1 155 GLN n 1 156 GLY n 1 157 VAL n 1 158 MET n 1 159 SER n 1 160 GLY n 1 161 GLY n 1 162 ASN n 1 163 VAL n 1 164 GLN n 1 165 SER n 1 166 ASN n 1 167 GLY n 1 168 ASN n 1 169 ASN n 1 170 CYS n 1 171 GLY n 1 172 ILE n 1 173 PRO n 1 174 ALA n 1 175 SER n 1 176 GLN n 1 177 ARG n 1 178 SER n 1 179 SER n 1 180 LEU n 1 181 PHE n 1 182 GLU n 1 183 ARG n 1 184 LEU n 1 185 GLN n 1 186 PRO n 1 187 ILE n 1 188 LEU n 1 189 SER n 1 190 GLN n 1 191 TYR n 1 192 GLY n 1 193 LEU n 1 194 SER n 1 195 LEU n 1 196 VAL n 1 197 THR n 1 198 GLY n 2 1 MSU n 2 2 ALA n 2 3 ALA n 2 4 PRO n 2 5 B2V n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Lysobacter enzymogenes' _entity_src_nat.pdbx_ncbi_taxonomy_id 69 _entity_src_nat.genus Lysobacter _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion 'SECRETED BY THE NATIVE BACTERIUM' _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'gene alpha-LP' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 1 UNP PRLA_LYSEN P00778 200 ;ANIVGGIEYSINNASLCSVGFSVTRGATKGFVTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVA NGSSFVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSG GNVQSNGNNCGIPASQRSSLFERLQPILSQYGLSLVTG ; ? 2 2 PDB 2H5D 2H5D ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H5D A 1 A 198 ? P00778 200 ? 397 ? 15 245 2 2 2H5D B 1 ? 5 ? 2H5D 199 ? 203 ? 199 203 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B2V peptide-like n 'VALINE BORONIC ACID' ? 'C4 H12 B N O2' 116.955 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSU non-polymer . 'SUCCINIC ACID MONOMETHYL ESTER' ? 'C5 H8 O4' 132.115 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2H5D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.44 _exptl_crystal.density_percent_sol 49.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.00 _exptl_crystal_grow.pdbx_details '1.3M LITHIUM SULFATE, 0.02M TRIS, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, pH 8.00' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2004-06-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL, SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.75 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength 0.75 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2H5D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.500 _reflns.d_resolution_high 0.900 _reflns.number_obs 147100 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.9000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 0.90 _reflns_shell.d_res_low 0.91 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.448 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.800 _reflns_shell.pdbx_redundancy 5.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2H5D _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 146962 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 0.90 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_obs 0.08 _refine.ls_R_factor_all 0.081 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.091 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.003 _refine.ls_number_reflns_R_free 7352 _refine.ls_number_parameters 20128 _refine.ls_number_restraints 23688 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ;HYDROGEN ATOMS WERE INCLUDED IN THE REFINEMENT AS "RIDING HYDROGENS", WITH POSITION AND GEOMETRY FIXED TO THOSE VALUES DEFINED BY SHELXL-97. METHYL AND HYDROXYL HYDROGENS ON SINGLE-CONFORMER SIDECHAINS WERE EACH POSITIONED AT A TORSION ANGLE THAT BEST SATISFIED POSITIVE DIFFERENCE ELECTRON DENSITY (USING INSTRUCTIONS HFIX 137 AND HFIX 147, RESPECTIVELY). IT SHOULD BE NOTED THAT THE LENGTH OF DONOR-HYDROGEN BONDS IN THIS STRUCTURE ARE LIKELY SHORTER THAN THEIR TRUE INTERNUCLEAR DISTANCE; THESE BOND LENGTHS ARE DEFINED BY SHELXL-97 PARAMETERS. THE POSITIONS OF SEVEN HYDROGEN ATOMS WERE ALLOWED TO REFINE FREELY: HIS57 HD1, HIS57 HE1, HIS57 HE2, SER214 HG, SER195 HN, GLY193 HN, AND B2V203 H1. DURING THE FINAL STAGES OF REFINEMENT, GEOMETRICAL RESTRAINTS WERE RELEASED FOR ALL NON- HYDROGEN ATOMS IN RESIDUES WITH SINGLE CONFORMATIONS. THE BORON IN RESIDUE B2V WAS REFINED AS A CARBON ATOM, ALLOWING REFINEMENT OF THE OCCUPANCY OF THIS ATOM TO ESTIMATE THE ELECTRON CONTENT (AND NEGATIVE CHARGE) AT THIS LOCATION. TO AID THE READER IN ANALYZING THE STRUCTURE IN THIS PDB FILE, THE ATOM HAS BEEN RE-NAMED TO "B", AND THE OCCUPANCY OF THE BORON ATOM MANUALLY CHANGED TO THE CORRESPONDING OCCUPANCY (1.07; REFINEMENT OF A CARBON IN THIS POSITION RESULTED IN AN OCCUPANCY OF 0.89). SEE PUBLICATION FOR MORE DETAILS. ; _refine.pdbx_starting_model 'SAME PROTEIN BOUND TO MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID AT 0.9A RESOLUTION (UNPUBLISHED DATA, BUT RELATED TO 1P02)' _refine.pdbx_method_to_determine_struct 'REFINEMENT OF PREVIOUSLY-SOLVED STRUCTURE OF ALPHA-LYTIC PROTEASE BOUND TO MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2H5D _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 21 _refine_analyze.occupancy_sum_hydrogen 1367.28 _refine_analyze.occupancy_sum_non_hydrogen 1784.32 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1424 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 432 _refine_hist.number_atoms_total 1901 _refine_hist.d_res_high 0.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.045 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.035 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.081 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.070 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.038 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.086 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2H5D _pdbx_refine.R_factor_all_no_cutoff 0.081 _pdbx_refine.R_factor_obs_no_cutoff 0.08 _pdbx_refine.free_R_factor_no_cutoff 0.091 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.003 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 7352 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.072 _pdbx_refine.free_R_factor_4sig_cutoff 0.082 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.020 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 6543 _pdbx_refine.number_reflns_obs_4sig_cutoff 130332 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2H5D _struct.title ;0.9A resolution crystal structure of alpha-lytic protease complexed with a transition state analogue, MeOSuc-Ala-Ala-Pro-Val boronic acid ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H5D _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;A-LYTIC PROTEASE, SERINE PROTEASE, ACYLATION TRANSITION STATE, CATALYSIS, PROTEIN FOLDING, PROTEIN STABILITY, PACKING DISTORTION, HYDROLASE-HYDROLASE INHIBITOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 5 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 34 ? GLY A 38 ? ALA A 55 GLY A 59 5 ? 5 HELX_P HELX_P2 2 PRO A 173 A ARG A 177 ? PRO A 222 ARG A 224 5 ? 5 HELX_P HELX_P3 3 LEU A 184 ? GLY A 192 ? LEU A 231 GLY A 239 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 37 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 101 SG ? ? ? 1_555 A CYS 111 SG ? ? A CYS 137 A CYS 159 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 137 SG ? ? ? 1_555 A CYS 170 SG ? A A CYS 189 A CYS 220 1_555 ? ? ? ? ? ? ? 2.057 ? ? covale1 covale none ? A SER 143 OG ? ? ? 1_555 B B2V 5 B ? ? A SER 195 B B2V 203 1_555 ? ? ? ? ? ? ? 1.466 ? ? covale2 covale both ? B MSU 1 C1 A ? ? 1_555 B ALA 2 N A ? B MSU 199 B ALA 200 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? B MSU 1 C1 B ? ? 1_555 B ALA 2 N B ? B MSU 199 B ALA 200 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale4 covale both ? B PRO 4 C ? ? ? 1_555 B B2V 5 N ? ? B PRO 202 B B2V 203 1_555 ? ? ? ? ? ? ? 1.326 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 59 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 60 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 8 ? C ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 2 B GLY A 5 ? ASN A 15 GLY A 18 A 2 THR A 74 ? ASN A 81 D THR A 113 ASN A 120 A 3 SER A 84 H THR A 87 K SER A 120 THR A 120 B 1 SER A 15 ? SER A 18 ? SER A 40 SER A 43 B 2 GLU A 8 ? ILE A 11 ? GLU A 32 ILE A 35 B 3 THR A 43 ? ILE A 46 ? THR A 62 ILE A 66 B 4 ALA A 49 ? VAL A 58 ? ALA A 82 VAL A 91 B 5 ARG A 64 ? LEU A 69 ? ARG A 103 LEU A 108 B 6 THR A 28 ? THR A 33 ? THR A 49 THR A 54 B 7 PHE A 21 ? ARG A 25 A PHE A 45 ARG A 48 B 8 SER A 194 ? LEU A 195 ? SER A 241 LEU A 242 C 1 ALA A 99 ? GLY A 104 ? ALA A 135 GLY A 140 C 2 GLY A 108 ? TYR A 123 ? GLY A 156 TYR A 171 C 3 GLY A 126 ? GLY A 134 ? GLY A 175 GLY A 183 C 4 SER A 179 ? ARG A 183 ? SER A 226 ARG A 230 C 5 ALA A 154 ? GLY A 161 ? ALA A 209 GLY A 216 C 6 SER A 146 ? ILE A 148 ? SER A 198 ILE A 200 C 7 ALA A 99 ? GLY A 104 ? ALA A 135 GLY A 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 5 ? N GLY A 18 O ALA A 80 C O ALA A 120 A 2 3 N VAL A 79 B N VAL A 120 O VAL A 86 J O VAL A 120 B 1 2 O CYS A 17 ? O CYS A 42 N TYR A 9 ? N TYR A 33 B 2 3 N SER A 10 ? N SER A 34 O ARG A 45 ? O ARG A 65 B 3 4 N ALA A 44 ? N ALA A 64 O VAL A 51 ? O VAL A 84 B 4 5 N THR A 53 ? N THR A 87 O SER A 68 ? O SER A 107 B 5 6 O VAL A 67 ? O VAL A 106 N PHE A 31 ? N PHE A 52 B 6 7 O THR A 28 ? O THR A 49 N ARG A 25 A N ARG A 48 B 7 8 N THR A 24 ? N THR A 48 O SER A 194 ? O SER A 241 C 1 2 N VAL A 100 ? N VAL A 136 O GLY A 112 ? O GLY A 160 C 2 3 N VAL A 119 ? N VAL A 167 O LEU A 131 ? O LEU A 180 C 3 4 N GLY A 134 ? N GLY A 183 O SER A 179 ? O SER A 226 C 4 5 O LEU A 180 ? O LEU A 227 N GLY A 160 ? N GLY A 215 C 5 6 O GLN A 155 ? O GLN A 210 N TRP A 147 ? N TRP A 199 C 6 7 O ILE A 148 ? O ILE A 200 N CYS A 101 ? N CYS A 137 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 246 ? 11 'BINDING SITE FOR RESIDUE SO4 A 246' AC2 Software B SO4 208 ? 7 'BINDING SITE FOR RESIDUE SO4 B 208' AC3 Software A SO4 247 ? 6 'BINDING SITE FOR RESIDUE SO4 A 247' AC4 Software A SO4 248 ? 15 'BINDING SITE FOR RESIDUE SO4 A 248' AC5 Software A SO4 249 ? 14 'BINDING SITE FOR RESIDUE SO4 A 249' AC6 Software A SO4 250 ? 7 'BINDING SITE FOR RESIDUE SO4 A 250' AC7 Software A SO4 251 ? 13 'BINDING SITE FOR RESIDUE SO4 A 251' AC8 Software A SO4 252 ? 8 'BINDING SITE FOR RESIDUE SO4 A 252' AC9 Software B GOL 204 ? 16 'BINDING SITE FOR RESIDUE GOL B 204' BC1 Software ? ? ? ? 29 'BINDING SITE FOR CHAIN B OF MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ALA A 1 A ALA A 15 . ? 3_665 ? 2 AC1 11 ASN A 2 B ASN A 15 . ? 3_665 ? 3 AC1 11 ARG A 183 ? ARG A 230 . ? 1_555 ? 4 AC1 11 PRO A 186 ? PRO A 233 . ? 1_555 ? 5 AC1 11 HOH L . ? HOH A 309 . ? 1_555 ? 6 AC1 11 HOH L . ? HOH A 334 . ? 1_555 ? 7 AC1 11 HOH L . ? HOH A 339 . ? 1_555 ? 8 AC1 11 HOH L . ? HOH A 374 . ? 1_555 ? 9 AC1 11 HOH L . ? HOH A 379 . ? 1_555 ? 10 AC1 11 HOH L . ? HOH A 398 . ? 1_555 ? 11 AC1 11 HOH L . ? HOH A 407 . ? 1_555 ? 12 AC2 7 ALA A 121 ? ALA A 169 . ? 1_555 ? 13 AC2 7 ASN A 122 ? ASN A 170 . ? 1_555 ? 14 AC2 7 MSU B 1 ? MSU B 199 . ? 1_555 ? 15 AC2 7 ALA B 2 ? ALA B 200 . ? 1_555 ? 16 AC2 7 HOH M . ? HOH B 409 . ? 1_555 ? 17 AC2 7 HOH M . ? HOH B 602 . ? 1_555 ? 18 AC2 7 HOH M . ? HOH B 711 . ? 1_555 ? 19 AC3 6 ARG A 57 ? ARG A 90 . ? 1_555 ? 20 AC3 6 HOH L . ? HOH A 318 . ? 1_555 ? 21 AC3 6 HOH L . ? HOH A 372 . ? 1_555 ? 22 AC3 6 HOH L . ? HOH A 377 . ? 1_555 ? 23 AC3 6 HOH L . ? HOH A 480 . ? 1_555 ? 24 AC3 6 HOH L . ? HOH A 603 . ? 1_555 ? 25 AC4 15 LEU A 16 ? LEU A 41 . ? 1_555 ? 26 AC4 15 THR A 92 ? THR A 125 . ? 5_565 ? 27 AC4 15 ARG A 105 ? ARG A 141 . ? 1_555 ? 28 AC4 15 SO4 F . ? SO4 A 249 . ? 1_555 ? 29 AC4 15 HOH L . ? HOH A 324 . ? 5_565 ? 30 AC4 15 HOH L . ? HOH A 357 . ? 1_555 ? 31 AC4 15 HOH L . ? HOH A 566 . ? 5_565 ? 32 AC4 15 HOH L . ? HOH A 593 . ? 1_555 ? 33 AC4 15 HOH L . ? HOH A 616 . ? 1_555 ? 34 AC4 15 HOH L . ? HOH A 617 . ? 5_565 ? 35 AC4 15 HOH L . ? HOH A 623 . ? 1_555 ? 36 AC4 15 HOH L . ? HOH A 640 . ? 1_555 ? 37 AC4 15 HOH L . ? HOH A 649 . ? 1_555 ? 38 AC4 15 HOH L . ? HOH A 705 . ? 1_555 ? 39 AC4 15 HOH L . ? HOH A 719 . ? 1_555 ? 40 AC5 14 SER A 83 G SER A 120 . ? 4_555 ? 41 AC5 14 GLY A 90 ? GLY A 123 . ? 5_565 ? 42 AC5 14 SER A 91 ? SER A 124 . ? 5_565 ? 43 AC5 14 THR A 92 ? THR A 125 . ? 5_565 ? 44 AC5 14 ARG A 140 ? ARG A 192 . ? 1_555 ? 45 AC5 14 SO4 E . ? SO4 A 248 . ? 1_555 ? 46 AC5 14 HOH L . ? HOH A 332 . ? 1_555 ? 47 AC5 14 HOH L . ? HOH A 343 . ? 1_555 ? 48 AC5 14 HOH L . ? HOH A 357 . ? 1_555 ? 49 AC5 14 HOH L . ? HOH A 578 . ? 4_555 ? 50 AC5 14 HOH L . ? HOH A 616 . ? 1_555 ? 51 AC5 14 HOH L . ? HOH A 625 . ? 5_565 ? 52 AC5 14 HOH L . ? HOH A 641 . ? 1_555 ? 53 AC5 14 HOH L . ? HOH A 649 . ? 1_555 ? 54 AC6 7 THR A 120 ? THR A 168 . ? 1_555 ? 55 AC6 7 ARG A 129 ? ARG A 178 . ? 1_555 ? 56 AC6 7 HOH L . ? HOH A 415 . ? 1_555 ? 57 AC6 7 HOH L . ? HOH A 513 . ? 1_555 ? 58 AC6 7 HOH L . ? HOH A 646 . ? 1_555 ? 59 AC6 7 HOH L . ? HOH A 650 . ? 1_555 ? 60 AC6 7 HOH L . ? HOH A 706 . ? 6_665 ? 61 AC7 13 ALA A 27 C ALA A 48 . ? 1_555 ? 62 AC7 13 THR A 28 ? THR A 49 . ? 1_555 ? 63 AC7 13 SER A 71 ? SER A 110 . ? 1_555 ? 64 AC7 13 ALA A 127 ? ALA A 176 . ? 6_655 ? 65 AC7 13 ARG A 129 ? ARG A 178 . ? 6_655 ? 66 AC7 13 HOH L . ? HOH A 323 . ? 1_555 ? 67 AC7 13 HOH L . ? HOH A 344 . ? 6_655 ? 68 AC7 13 HOH L . ? HOH A 361 . ? 1_555 ? 69 AC7 13 HOH L . ? HOH A 463 . ? 1_555 ? 70 AC7 13 HOH L . ? HOH A 599 . ? 1_555 ? 71 AC7 13 HOH L . ? HOH A 613 . ? 1_555 ? 72 AC7 13 HOH L . ? HOH A 658 . ? 1_555 ? 73 AC7 13 HOH L . ? HOH A 707 . ? 1_555 ? 74 AC8 8 ALA A 95 ? ALA A 131 . ? 1_555 ? 75 AC8 8 VAL A 96 ? VAL A 132 . ? 1_555 ? 76 AC8 8 LYS A 117 ? LYS A 165 . ? 1_555 ? 77 AC8 8 HOH L . ? HOH A 472 . ? 1_555 ? 78 AC8 8 HOH L . ? HOH A 533 . ? 1_555 ? 79 AC8 8 HOH L . ? HOH A 591 . ? 5_665 ? 80 AC8 8 HOH L . ? HOH A 609 . ? 1_555 ? 81 AC8 8 HOH L . ? HOH A 670 . ? 1_555 ? 82 AC9 16 LEU A 16 ? LEU A 41 . ? 1_555 ? 83 AC9 16 CYS A 17 ? CYS A 42 . ? 1_555 ? 84 AC9 16 HIS A 36 ? HIS A 57 . ? 1_555 ? 85 AC9 16 GLY A 141 ? GLY A 193 . ? 1_555 ? 86 AC9 16 SER A 143 ? SER A 195 . ? 1_555 ? 87 AC9 16 GLN A 153 ? GLN A 208 . ? 5_565 ? 88 AC9 16 HOH L . ? HOH A 393 . ? 5_565 ? 89 AC9 16 HOH L . ? HOH A 520 . ? 1_555 ? 90 AC9 16 HOH L . ? HOH A 582 . ? 5_565 ? 91 AC9 16 HOH L . ? HOH A 642 . ? 1_555 ? 92 AC9 16 PRO B 4 ? PRO B 202 . ? 1_555 ? 93 AC9 16 B2V B 5 ? B2V B 203 . ? 1_555 ? 94 AC9 16 HOH M . ? HOH B 378 . ? 1_555 ? 95 AC9 16 HOH M . ? HOH B 519 . ? 1_555 ? 96 AC9 16 HOH M . ? HOH B 589 . ? 1_555 ? 97 AC9 16 HOH M . ? HOH B 654 . ? 1_555 ? 98 BC1 29 HIS A 36 ? HIS A 57 . ? 1_555 ? 99 BC1 29 ARG A 89 ? ARG A 122 . ? 5_565 ? 100 BC1 29 TYR A 123 ? TYR A 171 . ? 1_555 ? 101 BC1 29 GLY A 139 ? GLY A 191 . ? 1_555 ? 102 BC1 29 GLY A 141 ? GLY A 193 . ? 1_555 ? 103 BC1 29 ASP A 142 ? ASP A 194 . ? 1_555 ? 104 BC1 29 SER A 143 ? SER A 195 . ? 1_555 ? 105 BC1 29 MET A 158 ? MET A 213 . ? 1_555 ? 106 BC1 29 SER A 159 ? SER A 214 . ? 1_555 ? 107 BC1 29 GLY A 160 ? GLY A 215 . ? 1_555 ? 108 BC1 29 GLY A 161 ? GLY A 216 . ? 1_555 ? 109 BC1 29 ASN A 162 ? ASN A 217 . ? 1_555 ? 110 BC1 29 VAL A 163 ? VAL A 218 . ? 1_555 ? 111 BC1 29 GLN A 164 ? GLN A 219 . ? 1_555 ? 112 BC1 29 GLY A 198 ? GLY A 245 . ? 5_565 ? 113 BC1 29 HOH L . ? HOH A 382 . ? 5_565 ? 114 BC1 29 HOH L . ? HOH A 572 . ? 5_565 ? 115 BC1 29 HOH L . ? HOH A 585 . ? 1_555 ? 116 BC1 29 HOH L . ? HOH A 587 . ? 5_565 ? 117 BC1 29 HOH L . ? HOH A 642 . ? 1_555 ? 118 BC1 29 HOH L . ? HOH A 688 . ? 1_555 ? 119 BC1 29 HOH L . ? HOH A 715 . ? 5_565 ? 120 BC1 29 HOH L . ? HOH A 730 . ? 6_665 ? 121 BC1 29 GOL K . ? GOL B 204 . ? 1_555 ? 122 BC1 29 SO4 J . ? SO4 B 208 . ? 1_555 ? 123 BC1 29 HOH M . ? HOH B 483 . ? 1_555 ? 124 BC1 29 HOH M . ? HOH B 654 . ? 1_555 ? 125 BC1 29 HOH M . ? HOH B 695 . ? 1_555 ? 126 BC1 29 HOH M . ? HOH B 711 . ? 1_555 ? # _atom_sites.entry_id 2H5D _atom_sites.fract_transf_matrix[1][1] 0.015205 _atom_sites.fract_transf_matrix[1][2] 0.008779 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017557 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012570 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol B C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 15 15 ALA ALA A A n A 1 2 ASN 2 15 15 ASN ASN A B n A 1 3 ILE 3 16 16 ILE ILE A . n A 1 4 VAL 4 17 17 VAL VAL A . n A 1 5 GLY 5 18 18 GLY GLY A . n A 1 6 GLY 6 19 19 GLY GLY A . n A 1 7 ILE 7 31 31 ILE ILE A . n A 1 8 GLU 8 32 32 GLU GLU A . n A 1 9 TYR 9 33 33 TYR TYR A . n A 1 10 SER 10 34 34 SER SER A . n A 1 11 ILE 11 35 35 ILE ILE A . n A 1 12 ASN 12 36 36 ASN ASN A . n A 1 13 ASN 13 38 38 ASN ASN A . n A 1 14 ALA 14 39 39 ALA ALA A . n A 1 15 SER 15 40 40 SER SER A . n A 1 16 LEU 16 41 41 LEU LEU A . n A 1 17 CYS 17 42 42 CYS CYS A . n A 1 18 SER 18 43 43 SER SER A . n A 1 19 VAL 19 44 44 VAL VAL A . n A 1 20 GLY 20 44 44 GLY GLY A A n A 1 21 PHE 21 45 45 PHE PHE A . n A 1 22 SER 22 46 46 SER SER A . n A 1 23 VAL 23 47 47 VAL VAL A . n A 1 24 THR 24 48 48 THR THR A . n A 1 25 ARG 25 48 48 ARG ARG A A n A 1 26 GLY 26 48 48 GLY GLY A B n A 1 27 ALA 27 48 48 ALA ALA A C n A 1 28 THR 28 49 49 THR THR A . n A 1 29 LYS 29 50 50 LYS LYS A . n A 1 30 GLY 30 51 51 GLY GLY A . n A 1 31 PHE 31 52 52 PHE PHE A . n A 1 32 VAL 32 53 53 VAL VAL A . n A 1 33 THR 33 54 54 THR THR A . n A 1 34 ALA 34 55 55 ALA ALA A . n A 1 35 GLY 35 56 56 GLY GLY A . n A 1 36 HIS 36 57 57 HIS HIS A . n A 1 37 CYS 37 58 58 CYS CYS A . n A 1 38 GLY 38 59 59 GLY GLY A . n A 1 39 THR 39 59 59 THR THR A A n A 1 40 VAL 40 59 59 VAL VAL A B n A 1 41 ASN 41 60 60 ASN ASN A . n A 1 42 ALA 42 61 61 ALA ALA A . n A 1 43 THR 43 62 62 THR THR A . n A 1 44 ALA 44 64 64 ALA ALA A . n A 1 45 ARG 45 65 65 ARG ARG A . n A 1 46 ILE 46 66 66 ILE ILE A . n A 1 47 GLY 47 67 67 GLY GLY A . n A 1 48 GLY 48 81 81 GLY GLY A . n A 1 49 ALA 49 82 82 ALA ALA A . n A 1 50 VAL 50 83 83 VAL VAL A . n A 1 51 VAL 51 84 84 VAL VAL A . n A 1 52 GLY 52 85 85 GLY GLY A . n A 1 53 THR 53 87 87 THR THR A . n A 1 54 PHE 54 88 88 PHE PHE A . n A 1 55 ALA 55 88 88 ALA ALA A A n A 1 56 ALA 56 89 89 ALA ALA A . n A 1 57 ARG 57 90 90 ARG ARG A . n A 1 58 VAL 58 91 91 VAL VAL A . n A 1 59 PHE 59 94 94 PHE PHE A . n A 1 60 PRO 60 95 95 PRO PRO A . n A 1 61 GLY 61 100 100 GLY GLY A . n A 1 62 ASN 62 101 101 ASN ASN A . n A 1 63 ASP 63 102 102 ASP ASP A . n A 1 64 ARG 64 103 103 ARG ARG A . n A 1 65 ALA 65 104 104 ALA ALA A . n A 1 66 TRP 66 105 105 TRP TRP A . n A 1 67 VAL 67 106 106 VAL VAL A . n A 1 68 SER 68 107 107 SER SER A . n A 1 69 LEU 69 108 108 LEU LEU A . n A 1 70 THR 70 109 109 THR THR A . n A 1 71 SER 71 110 110 SER SER A . n A 1 72 ALA 72 111 111 ALA ALA A . n A 1 73 GLN 73 112 112 GLN GLN A . n A 1 74 THR 74 113 113 THR THR A . n A 1 75 LEU 75 114 114 LEU LEU A . n A 1 76 LEU 76 119 119 LEU LEU A . n A 1 77 PRO 77 120 120 PRO PRO A . n A 1 78 ARG 78 120 120 ARG ARG A A n A 1 79 VAL 79 120 120 VAL VAL A B n A 1 80 ALA 80 120 120 ALA ALA A C n A 1 81 ASN 81 120 120 ASN ASN A D n A 1 82 GLY 82 120 120 GLY GLY A E n A 1 83 SER 83 120 120 SER SER A G n A 1 84 SER 84 120 120 SER SER A H n A 1 85 PHE 85 120 120 PHE PHE A I n A 1 86 VAL 86 120 120 VAL VAL A J n A 1 87 THR 87 120 120 THR THR A K n A 1 88 VAL 88 121 121 VAL VAL A . n A 1 89 ARG 89 122 122 ARG ARG A . n A 1 90 GLY 90 123 123 GLY GLY A . n A 1 91 SER 91 124 124 SER SER A . n A 1 92 THR 92 125 125 THR THR A . n A 1 93 GLU 93 129 129 GLU GLU A . n A 1 94 ALA 94 130 130 ALA ALA A . n A 1 95 ALA 95 131 131 ALA ALA A . n A 1 96 VAL 96 132 132 VAL VAL A . n A 1 97 GLY 97 133 133 GLY GLY A . n A 1 98 ALA 98 134 134 ALA ALA A . n A 1 99 ALA 99 135 135 ALA ALA A . n A 1 100 VAL 100 136 136 VAL VAL A . n A 1 101 CYS 101 137 137 CYS CYS A . n A 1 102 ARG 102 138 138 ARG ARG A . n A 1 103 SER 103 139 139 SER SER A . n A 1 104 GLY 104 140 140 GLY GLY A . n A 1 105 ARG 105 141 141 ARG ARG A . n A 1 106 THR 106 142 142 THR THR A . n A 1 107 THR 107 143 143 THR THR A . n A 1 108 GLY 108 156 156 GLY GLY A . n A 1 109 TYR 109 157 157 TYR TYR A . n A 1 110 GLN 110 158 158 GLN GLN A . n A 1 111 CYS 111 159 159 CYS CYS A . n A 1 112 GLY 112 160 160 GLY GLY A . n A 1 113 THR 113 161 161 THR THR A . n A 1 114 ILE 114 162 162 ILE ILE A . n A 1 115 THR 115 163 163 THR THR A . n A 1 116 ALA 116 164 164 ALA ALA A . n A 1 117 LYS 117 165 165 LYS LYS A . n A 1 118 ASN 118 166 166 ASN ASN A . n A 1 119 VAL 119 167 167 VAL VAL A . n A 1 120 THR 120 168 168 THR THR A . n A 1 121 ALA 121 169 169 ALA ALA A . n A 1 122 ASN 122 170 170 ASN ASN A . n A 1 123 TYR 123 171 171 TYR TYR A . n A 1 124 ALA 124 173 173 ALA ALA A . n A 1 125 GLU 125 174 174 GLU GLU A . n A 1 126 GLY 126 175 175 GLY GLY A . n A 1 127 ALA 127 176 176 ALA ALA A . n A 1 128 VAL 128 177 177 VAL VAL A . n A 1 129 ARG 129 178 178 ARG ARG A . n A 1 130 GLY 130 179 179 GLY GLY A . n A 1 131 LEU 131 180 180 LEU LEU A . n A 1 132 THR 132 181 181 THR THR A . n A 1 133 GLN 133 182 182 GLN GLN A . n A 1 134 GLY 134 183 183 GLY GLY A . n A 1 135 ASN 135 184 184 ASN ASN A . n A 1 136 ALA 136 185 185 ALA ALA A . n A 1 137 CYS 137 189 189 CYS CYS A . n A 1 138 MET 138 190 190 MET MET A . n A 1 139 GLY 139 191 191 GLY GLY A . n A 1 140 ARG 140 192 192 ARG ARG A . n A 1 141 GLY 141 193 193 GLY GLY A . n A 1 142 ASP 142 194 194 ASP ASP A . n A 1 143 SER 143 195 195 SER SER A . n A 1 144 GLY 144 196 196 GLY GLY A . n A 1 145 GLY 145 197 197 GLY GLY A . n A 1 146 SER 146 198 198 SER SER A . n A 1 147 TRP 147 199 199 TRP TRP A . n A 1 148 ILE 148 200 200 ILE ILE A . n A 1 149 THR 149 201 201 THR THR A . n A 1 150 SER 150 201 201 SER SER A A n A 1 151 ALA 151 202 202 ALA ALA A . n A 1 152 GLY 152 207 207 GLY GLY A . n A 1 153 GLN 153 208 208 GLN GLN A . n A 1 154 ALA 154 209 209 ALA ALA A . n A 1 155 GLN 155 210 210 GLN GLN A . n A 1 156 GLY 156 211 211 GLY GLY A . n A 1 157 VAL 157 212 212 VAL VAL A . n A 1 158 MET 158 213 213 MET MET A . n A 1 159 SER 159 214 214 SER SER A . n A 1 160 GLY 160 215 215 GLY GLY A . n A 1 161 GLY 161 216 216 GLY GLY A . n A 1 162 ASN 162 217 217 ASN ASN A . n A 1 163 VAL 163 218 218 VAL VAL A . n A 1 164 GLN 164 219 219 GLN GLN A . n A 1 165 SER 165 219 219 SER SER A A n A 1 166 ASN 166 219 219 ASN ASN A B n A 1 167 GLY 167 219 219 GLY GLY A C n A 1 168 ASN 168 219 219 ASN ASN A D n A 1 169 ASN 169 220 220 ASN ASN A . n A 1 170 CYS 170 220 220 CYS CYS A A n A 1 171 GLY 171 221 221 GLY GLY A . n A 1 172 ILE 172 222 222 ILE ILE A . n A 1 173 PRO 173 222 222 PRO PRO A A n A 1 174 ALA 174 222 222 ALA ALA A B n A 1 175 SER 175 222 222 SER SER A C n A 1 176 GLN 176 223 223 GLN GLN A . n A 1 177 ARG 177 224 224 ARG ARG A . n A 1 178 SER 178 225 225 SER SER A . n A 1 179 SER 179 226 226 SER SER A . n A 1 180 LEU 180 227 227 LEU LEU A . n A 1 181 PHE 181 228 228 PHE PHE A . n A 1 182 GLU 182 229 229 GLU GLU A . n A 1 183 ARG 183 230 230 ARG ARG A . n A 1 184 LEU 184 231 231 LEU LEU A . n A 1 185 GLN 185 232 232 GLN GLN A . n A 1 186 PRO 186 233 233 PRO PRO A . n A 1 187 ILE 187 234 234 ILE ILE A . n A 1 188 LEU 188 235 235 LEU LEU A . n A 1 189 SER 189 236 236 SER SER A . n A 1 190 GLN 190 237 237 GLN GLN A . n A 1 191 TYR 191 238 238 TYR TYR A . n A 1 192 GLY 192 239 239 GLY GLY A . n A 1 193 LEU 193 240 240 LEU LEU A . n A 1 194 SER 194 241 241 SER SER A . n A 1 195 LEU 195 242 242 LEU LEU A . n A 1 196 VAL 196 243 243 VAL VAL A . n A 1 197 THR 197 244 244 THR THR A . n A 1 198 GLY 198 245 245 GLY GLY A . n B 2 1 MSU 1 199 199 MSU MSU B . n B 2 2 ALA 2 200 200 ALA ALA B . n B 2 3 ALA 3 201 201 ALA ALA B . n B 2 4 PRO 4 202 202 PRO PRO B . n B 2 5 B2V 5 203 203 B2V B2V B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 246 207 SO4 SO4 A . D 3 SO4 1 247 209 SO4 SO4 A . E 3 SO4 1 248 210 SO4 SO4 A . F 3 SO4 1 249 211 SO4 SO4 A . G 3 SO4 1 250 212 SO4 SO4 A . H 3 SO4 1 251 213 SO4 SO4 A . I 3 SO4 1 252 214 SO4 SO4 A . J 3 SO4 1 208 208 SO4 SO4 B . K 4 GOL 1 204 204 GOL GOL B . L 5 HOH 1 300 300 HOH HOH A . L 5 HOH 2 301 301 HOH HOH A . L 5 HOH 3 302 302 HOH HOH A . L 5 HOH 4 303 303 HOH HOH A . L 5 HOH 5 304 304 HOH HOH A . L 5 HOH 6 305 305 HOH HOH A . L 5 HOH 7 306 306 HOH HOH A . L 5 HOH 8 307 307 HOH HOH A . L 5 HOH 9 308 308 HOH HOH A . L 5 HOH 10 309 309 HOH HOH A . L 5 HOH 11 310 310 HOH HOH A . L 5 HOH 12 311 311 HOH HOH A . L 5 HOH 13 312 312 HOH HOH A . L 5 HOH 14 313 313 HOH HOH A . L 5 HOH 15 314 314 HOH HOH A . L 5 HOH 16 315 315 HOH HOH A . L 5 HOH 17 316 316 HOH HOH A . L 5 HOH 18 317 317 HOH HOH A . L 5 HOH 19 318 318 HOH HOH A . L 5 HOH 20 319 319 HOH HOH A . L 5 HOH 21 320 320 HOH HOH A . L 5 HOH 22 321 321 HOH HOH A . L 5 HOH 23 322 322 HOH HOH A . L 5 HOH 24 323 323 HOH HOH A . L 5 HOH 25 324 324 HOH HOH A . L 5 HOH 26 325 325 HOH HOH A . L 5 HOH 27 326 326 HOH HOH A . L 5 HOH 28 327 327 HOH HOH A . L 5 HOH 29 328 328 HOH HOH A . L 5 HOH 30 329 329 HOH HOH A . L 5 HOH 31 330 330 HOH HOH A . L 5 HOH 32 331 331 HOH HOH A . L 5 HOH 33 332 332 HOH HOH A . L 5 HOH 34 333 333 HOH HOH A . L 5 HOH 35 334 334 HOH HOH A . L 5 HOH 36 335 335 HOH HOH A . L 5 HOH 37 336 336 HOH HOH A . L 5 HOH 38 337 337 HOH HOH A . L 5 HOH 39 338 338 HOH HOH A . L 5 HOH 40 339 339 HOH HOH A . L 5 HOH 41 340 340 HOH HOH A . L 5 HOH 42 341 341 HOH HOH A . L 5 HOH 43 342 342 HOH HOH A . L 5 HOH 44 343 343 HOH HOH A . L 5 HOH 45 344 344 HOH HOH A . L 5 HOH 46 345 345 HOH HOH A . L 5 HOH 47 346 346 HOH HOH A . L 5 HOH 48 347 347 HOH HOH A . L 5 HOH 49 348 348 HOH HOH A . L 5 HOH 50 349 349 HOH HOH A . L 5 HOH 51 350 350 HOH HOH A . L 5 HOH 52 351 351 HOH HOH A . L 5 HOH 53 352 352 HOH HOH A . L 5 HOH 54 353 353 HOH HOH A . L 5 HOH 55 354 354 HOH HOH A . L 5 HOH 56 355 355 HOH HOH A . L 5 HOH 57 356 356 HOH HOH A . L 5 HOH 58 357 357 HOH HOH A . L 5 HOH 59 358 358 HOH HOH A . L 5 HOH 60 359 359 HOH HOH A . L 5 HOH 61 360 360 HOH HOH A . L 5 HOH 62 361 361 HOH HOH A . L 5 HOH 63 362 362 HOH HOH A . L 5 HOH 64 363 363 HOH HOH A . L 5 HOH 65 364 364 HOH HOH A . L 5 HOH 66 365 365 HOH HOH A . L 5 HOH 67 366 366 HOH HOH A . L 5 HOH 68 367 367 HOH HOH A . L 5 HOH 69 368 368 HOH HOH A . L 5 HOH 70 369 369 HOH HOH A . L 5 HOH 71 370 370 HOH HOH A . L 5 HOH 72 371 371 HOH HOH A . L 5 HOH 73 372 372 HOH HOH A . L 5 HOH 74 373 373 HOH HOH A . L 5 HOH 75 374 374 HOH HOH A . L 5 HOH 76 375 375 HOH HOH A . L 5 HOH 77 376 376 HOH HOH A . L 5 HOH 78 377 377 HOH HOH A . L 5 HOH 79 379 379 HOH HOH A . L 5 HOH 80 380 380 HOH HOH A . L 5 HOH 81 381 381 HOH HOH A . L 5 HOH 82 382 382 HOH HOH A . L 5 HOH 83 383 383 HOH HOH A . L 5 HOH 84 384 384 HOH HOH A . L 5 HOH 85 385 385 HOH HOH A . L 5 HOH 86 386 386 HOH HOH A . L 5 HOH 87 387 387 HOH HOH A . L 5 HOH 88 388 388 HOH HOH A . L 5 HOH 89 389 389 HOH HOH A . L 5 HOH 90 390 390 HOH HOH A . L 5 HOH 91 391 391 HOH HOH A . L 5 HOH 92 392 392 HOH HOH A . L 5 HOH 93 393 393 HOH HOH A . L 5 HOH 94 394 394 HOH HOH A . L 5 HOH 95 395 395 HOH HOH A . L 5 HOH 96 396 396 HOH HOH A . L 5 HOH 97 397 397 HOH HOH A . L 5 HOH 98 398 398 HOH HOH A . L 5 HOH 99 399 399 HOH HOH A . L 5 HOH 100 400 400 HOH HOH A . L 5 HOH 101 401 401 HOH HOH A . L 5 HOH 102 402 402 HOH HOH A . L 5 HOH 103 403 403 HOH HOH A . L 5 HOH 104 404 404 HOH HOH A . L 5 HOH 105 405 405 HOH HOH A . L 5 HOH 106 406 406 HOH HOH A . L 5 HOH 107 407 407 HOH HOH A . L 5 HOH 108 408 408 HOH HOH A . L 5 HOH 109 410 410 HOH HOH A . L 5 HOH 110 411 411 HOH HOH A . L 5 HOH 111 412 412 HOH HOH A . L 5 HOH 112 413 413 HOH HOH A . L 5 HOH 113 414 414 HOH HOH A . L 5 HOH 114 415 415 HOH HOH A . L 5 HOH 115 416 416 HOH HOH A . L 5 HOH 116 417 417 HOH HOH A . L 5 HOH 117 418 418 HOH HOH A . L 5 HOH 118 419 419 HOH HOH A . L 5 HOH 119 420 420 HOH HOH A . L 5 HOH 120 421 421 HOH HOH A . L 5 HOH 121 422 422 HOH HOH A . L 5 HOH 122 423 423 HOH HOH A . L 5 HOH 123 424 424 HOH HOH A . L 5 HOH 124 425 425 HOH HOH A . L 5 HOH 125 426 426 HOH HOH A . L 5 HOH 126 427 427 HOH HOH A . L 5 HOH 127 428 428 HOH HOH A . L 5 HOH 128 429 429 HOH HOH A . L 5 HOH 129 430 430 HOH HOH A . L 5 HOH 130 431 431 HOH HOH A . L 5 HOH 131 432 432 HOH HOH A . L 5 HOH 132 433 433 HOH HOH A . L 5 HOH 133 434 434 HOH HOH A . L 5 HOH 134 435 435 HOH HOH A . L 5 HOH 135 436 436 HOH HOH A . L 5 HOH 136 437 437 HOH HOH A . L 5 HOH 137 438 438 HOH HOH A . L 5 HOH 138 439 439 HOH HOH A . L 5 HOH 139 440 440 HOH HOH A . L 5 HOH 140 441 441 HOH HOH A . L 5 HOH 141 442 442 HOH HOH A . L 5 HOH 142 443 443 HOH HOH A . L 5 HOH 143 444 444 HOH HOH A . L 5 HOH 144 445 445 HOH HOH A . L 5 HOH 145 446 446 HOH HOH A . L 5 HOH 146 447 447 HOH HOH A . L 5 HOH 147 448 448 HOH HOH A . L 5 HOH 148 449 449 HOH HOH A . L 5 HOH 149 450 450 HOH HOH A . L 5 HOH 150 451 451 HOH HOH A . L 5 HOH 151 452 452 HOH HOH A . L 5 HOH 152 453 453 HOH HOH A . L 5 HOH 153 454 454 HOH HOH A . L 5 HOH 154 455 455 HOH HOH A . L 5 HOH 155 456 456 HOH HOH A . L 5 HOH 156 457 457 HOH HOH A . L 5 HOH 157 458 458 HOH HOH A . L 5 HOH 158 459 459 HOH HOH A . L 5 HOH 159 460 460 HOH HOH A . L 5 HOH 160 461 461 HOH HOH A . L 5 HOH 161 462 462 HOH HOH A . L 5 HOH 162 463 463 HOH HOH A . L 5 HOH 163 464 464 HOH HOH A . L 5 HOH 164 465 465 HOH HOH A . L 5 HOH 165 466 466 HOH HOH A . L 5 HOH 166 467 467 HOH HOH A . L 5 HOH 167 468 468 HOH HOH A . L 5 HOH 168 469 469 HOH HOH A . L 5 HOH 169 470 470 HOH HOH A . L 5 HOH 170 471 471 HOH HOH A . L 5 HOH 171 472 472 HOH HOH A . L 5 HOH 172 473 473 HOH HOH A . L 5 HOH 173 474 474 HOH HOH A . L 5 HOH 174 475 475 HOH HOH A . L 5 HOH 175 476 476 HOH HOH A . L 5 HOH 176 477 477 HOH HOH A . L 5 HOH 177 478 478 HOH HOH A . L 5 HOH 178 479 479 HOH HOH A . L 5 HOH 179 480 480 HOH HOH A . L 5 HOH 180 481 481 HOH HOH A . L 5 HOH 181 482 482 HOH HOH A . L 5 HOH 182 484 484 HOH HOH A . L 5 HOH 183 485 485 HOH HOH A . L 5 HOH 184 486 486 HOH HOH A . L 5 HOH 185 487 487 HOH HOH A . L 5 HOH 186 488 488 HOH HOH A . L 5 HOH 187 489 489 HOH HOH A . L 5 HOH 188 490 490 HOH HOH A . L 5 HOH 189 491 491 HOH HOH A . L 5 HOH 190 492 492 HOH HOH A . L 5 HOH 191 493 493 HOH HOH A . L 5 HOH 192 494 494 HOH HOH A . L 5 HOH 193 495 495 HOH HOH A . L 5 HOH 194 496 496 HOH HOH A . L 5 HOH 195 497 497 HOH HOH A . L 5 HOH 196 498 498 HOH HOH A . L 5 HOH 197 499 499 HOH HOH A . L 5 HOH 198 500 500 HOH HOH A . L 5 HOH 199 501 501 HOH HOH A . L 5 HOH 200 502 502 HOH HOH A . L 5 HOH 201 503 503 HOH HOH A . L 5 HOH 202 504 504 HOH HOH A . L 5 HOH 203 505 505 HOH HOH A . L 5 HOH 204 506 506 HOH HOH A . L 5 HOH 205 507 507 HOH HOH A . L 5 HOH 206 508 508 HOH HOH A . L 5 HOH 207 509 509 HOH HOH A . L 5 HOH 208 510 510 HOH HOH A . L 5 HOH 209 511 511 HOH HOH A . L 5 HOH 210 512 512 HOH HOH A . L 5 HOH 211 513 513 HOH HOH A . L 5 HOH 212 514 514 HOH HOH A . L 5 HOH 213 515 515 HOH HOH A . L 5 HOH 214 516 516 HOH HOH A . L 5 HOH 215 517 517 HOH HOH A . L 5 HOH 216 518 518 HOH HOH A . L 5 HOH 217 520 520 HOH HOH A . L 5 HOH 218 521 521 HOH HOH A . L 5 HOH 219 522 522 HOH HOH A . L 5 HOH 220 523 523 HOH HOH A . L 5 HOH 221 524 524 HOH HOH A . L 5 HOH 222 525 525 HOH HOH A . L 5 HOH 223 526 526 HOH HOH A . L 5 HOH 224 527 527 HOH HOH A . L 5 HOH 225 528 528 HOH HOH A . L 5 HOH 226 529 529 HOH HOH A . L 5 HOH 227 530 530 HOH HOH A . L 5 HOH 228 531 531 HOH HOH A . L 5 HOH 229 532 532 HOH HOH A . L 5 HOH 230 533 533 HOH HOH A . L 5 HOH 231 534 534 HOH HOH A . L 5 HOH 232 535 535 HOH HOH A . L 5 HOH 233 536 536 HOH HOH A . L 5 HOH 234 537 537 HOH HOH A . L 5 HOH 235 538 538 HOH HOH A . L 5 HOH 236 539 539 HOH HOH A . L 5 HOH 237 540 540 HOH HOH A . L 5 HOH 238 541 541 HOH HOH A . L 5 HOH 239 542 542 HOH HOH A . L 5 HOH 240 543 543 HOH HOH A . L 5 HOH 241 544 544 HOH HOH A . L 5 HOH 242 545 545 HOH HOH A . L 5 HOH 243 546 546 HOH HOH A . L 5 HOH 244 547 547 HOH HOH A . L 5 HOH 245 548 548 HOH HOH A . L 5 HOH 246 549 549 HOH HOH A . L 5 HOH 247 550 550 HOH HOH A . L 5 HOH 248 551 551 HOH HOH A . L 5 HOH 249 552 552 HOH HOH A . L 5 HOH 250 553 553 HOH HOH A . L 5 HOH 251 554 554 HOH HOH A . L 5 HOH 252 555 555 HOH HOH A . L 5 HOH 253 556 556 HOH HOH A . L 5 HOH 254 557 557 HOH HOH A . L 5 HOH 255 558 558 HOH HOH A . L 5 HOH 256 559 559 HOH HOH A . L 5 HOH 257 560 560 HOH HOH A . L 5 HOH 258 561 561 HOH HOH A . L 5 HOH 259 562 562 HOH HOH A . L 5 HOH 260 563 563 HOH HOH A . L 5 HOH 261 564 564 HOH HOH A . L 5 HOH 262 565 565 HOH HOH A . L 5 HOH 263 566 566 HOH HOH A . L 5 HOH 264 567 567 HOH HOH A . L 5 HOH 265 568 568 HOH HOH A . L 5 HOH 266 569 569 HOH HOH A . L 5 HOH 267 570 570 HOH HOH A . L 5 HOH 268 571 571 HOH HOH A . L 5 HOH 269 572 572 HOH HOH A . L 5 HOH 270 573 573 HOH HOH A . L 5 HOH 271 574 574 HOH HOH A . L 5 HOH 272 575 575 HOH HOH A . L 5 HOH 273 576 576 HOH HOH A . L 5 HOH 274 577 577 HOH HOH A . L 5 HOH 275 578 578 HOH HOH A . L 5 HOH 276 579 579 HOH HOH A . L 5 HOH 277 580 580 HOH HOH A . L 5 HOH 278 581 581 HOH HOH A . L 5 HOH 279 582 582 HOH HOH A . L 5 HOH 280 583 583 HOH HOH A . L 5 HOH 281 584 584 HOH HOH A . L 5 HOH 282 585 585 HOH HOH A . L 5 HOH 283 586 586 HOH HOH A . L 5 HOH 284 587 587 HOH HOH A . L 5 HOH 285 588 588 HOH HOH A . L 5 HOH 286 590 590 HOH HOH A . L 5 HOH 287 591 591 HOH HOH A . L 5 HOH 288 592 592 HOH HOH A . L 5 HOH 289 593 593 HOH HOH A . L 5 HOH 290 594 594 HOH HOH A . L 5 HOH 291 595 595 HOH HOH A . L 5 HOH 292 596 596 HOH HOH A . L 5 HOH 293 597 597 HOH HOH A . L 5 HOH 294 598 598 HOH HOH A . L 5 HOH 295 599 599 HOH HOH A . L 5 HOH 296 600 600 HOH HOH A . L 5 HOH 297 601 601 HOH HOH A . L 5 HOH 298 603 603 HOH HOH A . L 5 HOH 299 604 604 HOH HOH A . L 5 HOH 300 605 605 HOH HOH A . L 5 HOH 301 606 606 HOH HOH A . L 5 HOH 302 607 607 HOH HOH A . L 5 HOH 303 608 608 HOH HOH A . L 5 HOH 304 609 609 HOH HOH A . L 5 HOH 305 610 610 HOH HOH A . L 5 HOH 306 611 611 HOH HOH A . L 5 HOH 307 612 612 HOH HOH A . L 5 HOH 308 613 613 HOH HOH A . L 5 HOH 309 614 614 HOH HOH A . L 5 HOH 310 615 615 HOH HOH A . L 5 HOH 311 616 616 HOH HOH A . L 5 HOH 312 617 617 HOH HOH A . L 5 HOH 313 618 618 HOH HOH A . L 5 HOH 314 619 619 HOH HOH A . L 5 HOH 315 620 620 HOH HOH A . L 5 HOH 316 621 621 HOH HOH A . L 5 HOH 317 622 622 HOH HOH A . L 5 HOH 318 623 623 HOH HOH A . L 5 HOH 319 624 624 HOH HOH A . L 5 HOH 320 625 625 HOH HOH A . L 5 HOH 321 626 626 HOH HOH A . L 5 HOH 322 627 627 HOH HOH A . L 5 HOH 323 628 628 HOH HOH A . L 5 HOH 324 629 629 HOH HOH A . L 5 HOH 325 630 630 HOH HOH A . L 5 HOH 326 631 631 HOH HOH A . L 5 HOH 327 632 632 HOH HOH A . L 5 HOH 328 633 633 HOH HOH A . L 5 HOH 329 634 634 HOH HOH A . L 5 HOH 330 635 635 HOH HOH A . L 5 HOH 331 636 636 HOH HOH A . L 5 HOH 332 637 637 HOH HOH A . L 5 HOH 333 638 638 HOH HOH A . L 5 HOH 334 639 639 HOH HOH A . L 5 HOH 335 640 640 HOH HOH A . L 5 HOH 336 641 641 HOH HOH A . L 5 HOH 337 642 642 HOH HOH A . L 5 HOH 338 643 643 HOH HOH A . L 5 HOH 339 644 644 HOH HOH A . L 5 HOH 340 645 645 HOH HOH A . L 5 HOH 341 646 646 HOH HOH A . L 5 HOH 342 647 647 HOH HOH A . L 5 HOH 343 648 648 HOH HOH A . L 5 HOH 344 649 649 HOH HOH A . L 5 HOH 345 650 650 HOH HOH A . L 5 HOH 346 651 651 HOH HOH A . L 5 HOH 347 652 652 HOH HOH A . L 5 HOH 348 653 653 HOH HOH A . L 5 HOH 349 655 655 HOH HOH A . L 5 HOH 350 656 656 HOH HOH A . L 5 HOH 351 657 657 HOH HOH A . L 5 HOH 352 658 658 HOH HOH A . L 5 HOH 353 659 659 HOH HOH A . L 5 HOH 354 660 660 HOH HOH A . L 5 HOH 355 661 661 HOH HOH A . L 5 HOH 356 662 662 HOH HOH A . L 5 HOH 357 663 663 HOH HOH A . L 5 HOH 358 664 664 HOH HOH A . L 5 HOH 359 665 665 HOH HOH A . L 5 HOH 360 666 666 HOH HOH A . L 5 HOH 361 667 667 HOH HOH A . L 5 HOH 362 668 668 HOH HOH A . L 5 HOH 363 669 669 HOH HOH A . L 5 HOH 364 670 670 HOH HOH A . L 5 HOH 365 671 671 HOH HOH A . L 5 HOH 366 672 672 HOH HOH A . L 5 HOH 367 673 673 HOH HOH A . L 5 HOH 368 674 674 HOH HOH A . L 5 HOH 369 675 675 HOH HOH A . L 5 HOH 370 676 676 HOH HOH A . L 5 HOH 371 677 677 HOH HOH A . L 5 HOH 372 678 678 HOH HOH A . L 5 HOH 373 679 679 HOH HOH A . L 5 HOH 374 680 680 HOH HOH A . L 5 HOH 375 681 681 HOH HOH A . L 5 HOH 376 682 682 HOH HOH A . L 5 HOH 377 683 683 HOH HOH A . L 5 HOH 378 684 684 HOH HOH A . L 5 HOH 379 685 685 HOH HOH A . L 5 HOH 380 686 686 HOH HOH A . L 5 HOH 381 687 687 HOH HOH A . L 5 HOH 382 688 688 HOH HOH A . L 5 HOH 383 689 689 HOH HOH A . L 5 HOH 384 690 690 HOH HOH A . L 5 HOH 385 691 691 HOH HOH A . L 5 HOH 386 692 692 HOH HOH A . L 5 HOH 387 693 693 HOH HOH A . L 5 HOH 388 694 694 HOH HOH A . L 5 HOH 389 696 696 HOH HOH A . L 5 HOH 390 697 697 HOH HOH A . L 5 HOH 391 698 698 HOH HOH A . L 5 HOH 392 699 699 HOH HOH A . L 5 HOH 393 700 700 HOH HOH A . L 5 HOH 394 701 701 HOH HOH A . L 5 HOH 395 702 702 HOH HOH A . L 5 HOH 396 703 703 HOH HOH A . L 5 HOH 397 704 704 HOH HOH A . L 5 HOH 398 705 705 HOH HOH A . L 5 HOH 399 706 706 HOH HOH A . L 5 HOH 400 707 707 HOH HOH A . L 5 HOH 401 708 708 HOH HOH A . L 5 HOH 402 709 709 HOH HOH A . L 5 HOH 403 710 710 HOH HOH A . L 5 HOH 404 712 712 HOH HOH A . L 5 HOH 405 713 713 HOH HOH A . L 5 HOH 406 714 714 HOH HOH A . L 5 HOH 407 715 715 HOH HOH A . L 5 HOH 408 716 716 HOH HOH A . L 5 HOH 409 717 717 HOH HOH A . L 5 HOH 410 718 718 HOH HOH A . L 5 HOH 411 719 719 HOH HOH A . L 5 HOH 412 720 720 HOH HOH A . L 5 HOH 413 721 721 HOH HOH A . L 5 HOH 414 722 722 HOH HOH A . L 5 HOH 415 723 723 HOH HOH A . L 5 HOH 416 724 724 HOH HOH A . L 5 HOH 417 725 725 HOH HOH A . L 5 HOH 418 726 726 HOH HOH A . L 5 HOH 419 727 727 HOH HOH A . L 5 HOH 420 728 728 HOH HOH A . L 5 HOH 421 729 729 HOH HOH A . L 5 HOH 422 730 730 HOH HOH A . L 5 HOH 423 9575 9575 HOH HOH A . M 5 HOH 1 378 378 HOH HOH B . M 5 HOH 2 409 409 HOH HOH B . M 5 HOH 3 483 483 HOH HOH B . M 5 HOH 4 519 519 HOH HOH B . M 5 HOH 5 589 589 HOH HOH B . M 5 HOH 6 602 602 HOH HOH B . M 5 HOH 7 654 654 HOH HOH B . M 5 HOH 8 695 695 HOH HOH B . M 5 HOH 9 711 711 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_000316 _pdbx_molecule_features.name 'METHOXYSUCCINYL-ALA-ALA-PRO-VALINE BORONIC ACID' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000316 _pdbx_molecule.asym_id B # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id B2V _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id B2V _pdbx_struct_mod_residue.auth_seq_id 203 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id VAL _pdbx_struct_mod_residue.details 'VALINE BORONIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2280 ? 1 MORE -81 ? 1 'SSA (A^2)' 8060 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 595 ? L HOH . 2 1 A HOH 604 ? L HOH . 3 1 A HOH 605 ? L HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-26 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2023-08-30 6 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Refinement description' 13 6 'Structure model' 'Atomic model' 14 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site 7 6 'Structure model' atom_site 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_dist_value' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 20 6 'Structure model' '_atom_site.auth_atom_id' 21 6 'Structure model' '_atom_site.label_atom_id' 22 6 'Structure model' '_chem_comp_atom.atom_id' 23 6 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 starting 'model building' 'model (see above)' ? 3 SHELXL-97 refinement . ? 4 HKL-2000 'data reduction' . ? 5 # _pdbx_entry_details.entry_id 2H5D _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details 'GLYCEROL BOUND TO THE CATALYTIC ADDUCT, CREATING A MIMIC OF THE ACYLATION TRANSITION STATE INTERMEDIATE' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3 A SO4 252 ? ? O A HOH 533 ? ? 0.84 2 1 S A SO4 252 ? ? O A HOH 533 ? ? 0.98 3 1 HH11 A ARG 141 ? A HG1 A THR 142 ? ? 1.28 4 1 O2 B B2V 203 ? ? C2 B GOL 204 ? B 1.39 5 1 O2 B B2V 203 ? ? C2 B GOL 204 ? A 1.39 6 1 O2 B B2V 203 ? ? C2 B GOL 204 ? C 1.44 7 1 O2 A SO4 252 ? ? O A HOH 533 ? ? 1.69 8 1 O1 A SO4 252 ? ? O A HOH 533 ? ? 1.98 9 1 O A HOH 424 ? ? O A HOH 631 ? ? 2.11 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CZ _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 ARG _pdbx_validate_rmsd_bond.auth_seq_id_1 178 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 NH2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 ARG _pdbx_validate_rmsd_bond.auth_seq_id_2 178 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.405 _pdbx_validate_rmsd_bond.bond_target_value 1.326 _pdbx_validate_rmsd_bond.bond_deviation 0.079 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A ARG 48 A A NE A ARG 48 A A CZ A ARG 48 A A 134.17 123.60 10.57 1.40 N 2 1 NE A ARG 48 A A CZ A ARG 48 A A NH2 A ARG 48 A A 117.14 120.30 -3.16 0.50 N 3 1 NE A ARG 48 A B CZ A ARG 48 A B NH2 A ARG 48 A B 116.16 120.30 -4.14 0.50 N 4 1 NE A ARG 90 ? A CZ A ARG 90 ? A NH2 A ARG 90 ? A 117.06 120.30 -3.24 0.50 N 5 1 NE A ARG 120 A B CZ A ARG 120 A B NH1 A ARG 120 A B 115.69 120.30 -4.61 0.50 N 6 1 NE A ARG 120 A B CZ A ARG 120 A B NH2 A ARG 120 A B 124.37 120.30 4.07 0.50 N 7 1 NE A ARG 141 ? B CZ A ARG 141 ? B NH2 A ARG 141 ? B 117.15 120.30 -3.15 0.50 N 8 1 NE A ARG 178 ? ? CZ A ARG 178 ? ? NH1 A ARG 178 ? ? 115.80 120.30 -4.50 0.50 N 9 1 O A SER 201 A B C A SER 201 A B N A ALA 202 ? ? 110.60 122.70 -12.10 1.60 Y 10 1 NE A ARG 230 ? ? CZ A ARG 230 ? ? NH1 A ARG 230 ? ? 123.31 120.30 3.01 0.50 N 11 1 NE A ARG 230 ? ? CZ A ARG 230 ? ? NH2 A ARG 230 ? ? 117.13 120.30 -3.17 0.50 N 12 1 O A LEU 242 ? B C A LEU 242 ? B N A VAL 243 ? ? 132.42 122.70 9.72 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 39 ? ? -132.71 -91.46 2 1 ARG A 48 A D -153.32 87.62 3 1 ASN A 60 ? ? 80.89 -1.55 4 1 PRO A 95 ? ? -77.48 -155.33 5 1 PRO A 120 ? ? -87.23 49.66 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id LEU _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 41 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id B _pdbx_validate_main_chain_plane.improper_torsion_angle -14.82 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 138 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.097 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 SER _pdbx_validate_polymer_linkage.auth_seq_id_1 222 _pdbx_validate_polymer_linkage.PDB_ins_code_1 C _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 GLN _pdbx_validate_polymer_linkage.auth_seq_id_2 223 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 B _pdbx_validate_polymer_linkage.dist 1.20 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id B _pdbx_unobs_or_zero_occ_atoms.auth_comp_id GOL _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 204 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id O2 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id K _pdbx_unobs_or_zero_occ_atoms.label_comp_id GOL _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id O2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B2V N N N N 74 B2V CA C N R 75 B2V CB C N N 76 B2V CG1 C N N 77 B2V CG2 C N N 78 B2V B B N N 79 B2V O1 O N N 80 B2V O2 O N N 81 B2V H H N N 82 B2V H2 H N N 83 B2V HA H N N 84 B2V HB H N N 85 B2V HG11 H N N 86 B2V HG12 H N N 87 B2V HG13 H N N 88 B2V HG21 H N N 89 B2V HG22 H N N 90 B2V HG23 H N N 91 B2V HO1 H N N 92 B2V HO2 H N N 93 CYS N N N N 94 CYS CA C N R 95 CYS C C N N 96 CYS O O N N 97 CYS CB C N N 98 CYS SG S N N 99 CYS OXT O N N 100 CYS H H N N 101 CYS H2 H N N 102 CYS HA H N N 103 CYS HB2 H N N 104 CYS HB3 H N N 105 CYS HG H N N 106 CYS HXT H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 GOL C1 C N N 157 GOL O1 O N N 158 GOL C2 C N N 159 GOL O2 O N N 160 GOL C3 C N N 161 GOL O3 O N N 162 GOL H11 H N N 163 GOL H12 H N N 164 GOL HO1 H N N 165 GOL H2 H N N 166 GOL HO2 H N N 167 GOL H31 H N N 168 GOL H32 H N N 169 GOL HO3 H N N 170 HIS N N N N 171 HIS CA C N S 172 HIS C C N N 173 HIS O O N N 174 HIS CB C N N 175 HIS CG C Y N 176 HIS ND1 N Y N 177 HIS CD2 C Y N 178 HIS CE1 C Y N 179 HIS NE2 N Y N 180 HIS OXT O N N 181 HIS H H N N 182 HIS H2 H N N 183 HIS HA H N N 184 HIS HB2 H N N 185 HIS HB3 H N N 186 HIS HD1 H N N 187 HIS HD2 H N N 188 HIS HE1 H N N 189 HIS HE2 H N N 190 HIS HXT H N N 191 HOH O O N N 192 HOH H1 H N N 193 HOH H2 H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LEU N N N N 217 LEU CA C N S 218 LEU C C N N 219 LEU O O N N 220 LEU CB C N N 221 LEU CG C N N 222 LEU CD1 C N N 223 LEU CD2 C N N 224 LEU OXT O N N 225 LEU H H N N 226 LEU H2 H N N 227 LEU HA H N N 228 LEU HB2 H N N 229 LEU HB3 H N N 230 LEU HG H N N 231 LEU HD11 H N N 232 LEU HD12 H N N 233 LEU HD13 H N N 234 LEU HD21 H N N 235 LEU HD22 H N N 236 LEU HD23 H N N 237 LEU HXT H N N 238 LYS N N N N 239 LYS CA C N S 240 LYS C C N N 241 LYS O O N N 242 LYS CB C N N 243 LYS CG C N N 244 LYS CD C N N 245 LYS CE C N N 246 LYS NZ N N N 247 LYS OXT O N N 248 LYS H H N N 249 LYS H2 H N N 250 LYS HA H N N 251 LYS HB2 H N N 252 LYS HB3 H N N 253 LYS HG2 H N N 254 LYS HG3 H N N 255 LYS HD2 H N N 256 LYS HD3 H N N 257 LYS HE2 H N N 258 LYS HE3 H N N 259 LYS HZ1 H N N 260 LYS HZ2 H N N 261 LYS HZ3 H N N 262 LYS HXT H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 MSU C1 C N N 284 MSU O1 O N N 285 MSU C2 C N N 286 MSU C3 C N N 287 MSU C4 C N N 288 MSU OT1 O N N 289 MSU OT2 O N N 290 MSU CT C N N 291 MSU OXT O N N 292 MSU H21 H N N 293 MSU H22 H N N 294 MSU H31 H N N 295 MSU H32 H N N 296 MSU HT1 H N N 297 MSU HT2 H N N 298 MSU HT3 H N N 299 MSU HXT H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 SO4 S S N N 355 SO4 O1 O N N 356 SO4 O2 O N N 357 SO4 O3 O N N 358 SO4 O4 O N N 359 THR N N N N 360 THR CA C N S 361 THR C C N N 362 THR O O N N 363 THR CB C N R 364 THR OG1 O N N 365 THR CG2 C N N 366 THR OXT O N N 367 THR H H N N 368 THR H2 H N N 369 THR HA H N N 370 THR HB H N N 371 THR HG1 H N N 372 THR HG21 H N N 373 THR HG22 H N N 374 THR HG23 H N N 375 THR HXT H N N 376 TRP N N N N 377 TRP CA C N S 378 TRP C C N N 379 TRP O O N N 380 TRP CB C N N 381 TRP CG C Y N 382 TRP CD1 C Y N 383 TRP CD2 C Y N 384 TRP NE1 N Y N 385 TRP CE2 C Y N 386 TRP CE3 C Y N 387 TRP CZ2 C Y N 388 TRP CZ3 C Y N 389 TRP CH2 C Y N 390 TRP OXT O N N 391 TRP H H N N 392 TRP H2 H N N 393 TRP HA H N N 394 TRP HB2 H N N 395 TRP HB3 H N N 396 TRP HD1 H N N 397 TRP HE1 H N N 398 TRP HE3 H N N 399 TRP HZ2 H N N 400 TRP HZ3 H N N 401 TRP HH2 H N N 402 TRP HXT H N N 403 TYR N N N N 404 TYR CA C N S 405 TYR C C N N 406 TYR O O N N 407 TYR CB C N N 408 TYR CG C Y N 409 TYR CD1 C Y N 410 TYR CD2 C Y N 411 TYR CE1 C Y N 412 TYR CE2 C Y N 413 TYR CZ C Y N 414 TYR OH O N N 415 TYR OXT O N N 416 TYR H H N N 417 TYR H2 H N N 418 TYR HA H N N 419 TYR HB2 H N N 420 TYR HB3 H N N 421 TYR HD1 H N N 422 TYR HD2 H N N 423 TYR HE1 H N N 424 TYR HE2 H N N 425 TYR HH H N N 426 TYR HXT H N N 427 VAL N N N N 428 VAL CA C N S 429 VAL C C N N 430 VAL O O N N 431 VAL CB C N N 432 VAL CG1 C N N 433 VAL CG2 C N N 434 VAL OXT O N N 435 VAL H H N N 436 VAL H2 H N N 437 VAL HA H N N 438 VAL HB H N N 439 VAL HG11 H N N 440 VAL HG12 H N N 441 VAL HG13 H N N 442 VAL HG21 H N N 443 VAL HG22 H N N 444 VAL HG23 H N N 445 VAL HXT H N N 446 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B2V N CA sing N N 70 B2V N H sing N N 71 B2V N H2 sing N N 72 B2V CA CB sing N N 73 B2V CA B sing N N 74 B2V CA HA sing N N 75 B2V CB CG1 sing N N 76 B2V CB CG2 sing N N 77 B2V CB HB sing N N 78 B2V CG1 HG11 sing N N 79 B2V CG1 HG12 sing N N 80 B2V CG1 HG13 sing N N 81 B2V CG2 HG21 sing N N 82 B2V CG2 HG22 sing N N 83 B2V CG2 HG23 sing N N 84 B2V B O1 sing N N 85 B2V B O2 sing N N 86 B2V O1 HO1 sing N N 87 B2V O2 HO2 sing N N 88 CYS N CA sing N N 89 CYS N H sing N N 90 CYS N H2 sing N N 91 CYS CA C sing N N 92 CYS CA CB sing N N 93 CYS CA HA sing N N 94 CYS C O doub N N 95 CYS C OXT sing N N 96 CYS CB SG sing N N 97 CYS CB HB2 sing N N 98 CYS CB HB3 sing N N 99 CYS SG HG sing N N 100 CYS OXT HXT sing N N 101 GLN N CA sing N N 102 GLN N H sing N N 103 GLN N H2 sing N N 104 GLN CA C sing N N 105 GLN CA CB sing N N 106 GLN CA HA sing N N 107 GLN C O doub N N 108 GLN C OXT sing N N 109 GLN CB CG sing N N 110 GLN CB HB2 sing N N 111 GLN CB HB3 sing N N 112 GLN CG CD sing N N 113 GLN CG HG2 sing N N 114 GLN CG HG3 sing N N 115 GLN CD OE1 doub N N 116 GLN CD NE2 sing N N 117 GLN NE2 HE21 sing N N 118 GLN NE2 HE22 sing N N 119 GLN OXT HXT sing N N 120 GLU N CA sing N N 121 GLU N H sing N N 122 GLU N H2 sing N N 123 GLU CA C sing N N 124 GLU CA CB sing N N 125 GLU CA HA sing N N 126 GLU C O doub N N 127 GLU C OXT sing N N 128 GLU CB CG sing N N 129 GLU CB HB2 sing N N 130 GLU CB HB3 sing N N 131 GLU CG CD sing N N 132 GLU CG HG2 sing N N 133 GLU CG HG3 sing N N 134 GLU CD OE1 doub N N 135 GLU CD OE2 sing N N 136 GLU OE2 HE2 sing N N 137 GLU OXT HXT sing N N 138 GLY N CA sing N N 139 GLY N H sing N N 140 GLY N H2 sing N N 141 GLY CA C sing N N 142 GLY CA HA2 sing N N 143 GLY CA HA3 sing N N 144 GLY C O doub N N 145 GLY C OXT sing N N 146 GLY OXT HXT sing N N 147 GOL C1 O1 sing N N 148 GOL C1 C2 sing N N 149 GOL C1 H11 sing N N 150 GOL C1 H12 sing N N 151 GOL O1 HO1 sing N N 152 GOL C2 O2 sing N N 153 GOL C2 C3 sing N N 154 GOL C2 H2 sing N N 155 GOL O2 HO2 sing N N 156 GOL C3 O3 sing N N 157 GOL C3 H31 sing N N 158 GOL C3 H32 sing N N 159 GOL O3 HO3 sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 MSU C1 O1 doub N N 269 MSU C1 C2 sing N N 270 MSU C1 OXT sing N N 271 MSU C2 C3 sing N N 272 MSU C2 H21 sing N N 273 MSU C2 H22 sing N N 274 MSU C3 C4 sing N N 275 MSU C3 H31 sing N N 276 MSU C3 H32 sing N N 277 MSU C4 OT1 doub N N 278 MSU C4 OT2 sing N N 279 MSU OT2 CT sing N N 280 MSU CT HT1 sing N N 281 MSU CT HT2 sing N N 282 MSU CT HT3 sing N N 283 MSU OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 SO4 S O1 doub N N 338 SO4 S O2 doub N N 339 SO4 S O3 sing N N 340 SO4 S O4 sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1P02 _pdbx_initial_refinement_model.details 'SAME PROTEIN BOUND TO MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID AT 0.9A RESOLUTION (UNPUBLISHED DATA, BUT RELATED TO 1P02)' #