data_2H8S
#
_entry.id 2H8S
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.397
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2H8S pdb_00002h8s 10.2210/pdb2h8s/pdb
RCSB RCSB038072 ? ?
WWPDB D_1000038072 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2006-06-27
2 'Structure model' 1 1 2008-05-01
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2022-03-09
5 'Structure model' 1 4 2024-10-09
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Data collection'
7 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' database_2
2 4 'Structure model' pdbx_nmr_software
3 4 'Structure model' pdbx_nmr_spectrometer
4 4 'Structure model' pdbx_struct_assembly
5 4 'Structure model' pdbx_struct_oper_list
6 4 'Structure model' struct_conn
7 4 'Structure model' struct_site
8 5 'Structure model' chem_comp_atom
9 5 'Structure model' chem_comp_bond
10 5 'Structure model' pdbx_entry_details
11 5 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_pdbx_nmr_software.name'
4 4 'Structure model' '_pdbx_nmr_spectrometer.model'
5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
6 4 'Structure model' '_struct_site.pdbx_auth_asym_id'
7 4 'Structure model' '_struct_site.pdbx_auth_comp_id'
8 4 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2H8S
_pdbx_database_status.recvd_initial_deposition_date 2006-06-07
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr REL
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Clark, R.J.' 1
'Fischer, H.' 2
'Nevin, S.T.' 3
'Adams, D.J.' 4
'Craik, D.J.' 5
#
_citation.id primary
_citation.title
'The Synthesis, Structural Characterization, and Receptor Specificity of the {alpha}-Conotoxin Vc1.1.'
_citation.journal_abbrev J.Biol.Chem.
_citation.journal_volume 281
_citation.page_first 23254
_citation.page_last 23263
_citation.year 2006
_citation.journal_id_ASTM JBCHA3
_citation.country US
_citation.journal_id_ISSN 0021-9258
_citation.journal_id_CSD 0071
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 16754662
_citation.pdbx_database_id_DOI 10.1074/jbc.M604550200
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Clark, R.J.' 1 ?
primary 'Fischer, H.' 2 ?
primary 'Nevin, S.T.' 3 ?
primary 'Adams, D.J.' 4 ?
primary 'Craik, D.J.' 5 ?
#
_entity.id 1
_entity.type polymer
_entity.src_method syn
_entity.pdbx_description 'Alpha-conotoxin Vc1A'
_entity.formula_weight 1812.018
_entity.pdbx_number_of_molecules 1
_entity.pdbx_ec ?
_entity.pdbx_mutation ?
_entity.pdbx_fragment ?
_entity.details ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'alpha-conotoxin Vc1.1, Alpha-Vc1A, ACV1'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code 'GCCSDPRCNYDHPEIC(NH2)'
_entity_poly.pdbx_seq_one_letter_code_can GCCSDPRCNYDHPEICX
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 CYS n
1 3 CYS n
1 4 SER n
1 5 ASP n
1 6 PRO n
1 7 ARG n
1 8 CYS n
1 9 ASN n
1 10 TYR n
1 11 ASP n
1 12 HIS n
1 13 PRO n
1 14 GLU n
1 15 ILE n
1 16 CYS n
1 17 NH2 n
#
_pdbx_entity_src_syn.entity_id 1
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num ?
_pdbx_entity_src_syn.pdbx_end_seq_num ?
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details 'solid phase peptide synthesis'
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 1 1 GLY GLY A . n
A 1 2 CYS 2 2 2 CYS CYS A . n
A 1 3 CYS 3 3 3 CYS CYS A . n
A 1 4 SER 4 4 4 SER SER A . n
A 1 5 ASP 5 5 5 ASP ASP A . n
A 1 6 PRO 6 6 6 PRO PRO A . n
A 1 7 ARG 7 7 7 ARG ARG A . n
A 1 8 CYS 8 8 8 CYS CYS A . n
A 1 9 ASN 9 9 9 ASN ASN A . n
A 1 10 TYR 10 10 10 TYR TYR A . n
A 1 11 ASP 11 11 11 ASP ASP A . n
A 1 12 HIS 12 12 12 HIS HIS A . n
A 1 13 PRO 13 13 13 PRO PRO A . n
A 1 14 GLU 14 14 14 GLU GLU A . n
A 1 15 ILE 15 15 15 ILE ILE A . n
A 1 16 CYS 16 16 16 CYS CYS A . n
A 1 17 NH2 17 17 16 NH2 CYS A . n
#
_exptl.entry_id 2H8S
_exptl.method 'SOLUTION NMR'
_exptl.crystals_number ?
#
_database_PDB_matrix.entry_id 2H8S
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2H8S
_struct.title 'Solution structure of alpha-conotoxin Vc1.1'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2H8S
_struct_keywords.pdbx_keywords TOXIN
_struct_keywords.text 'alpha-conotoxin, alpha-helix, disulfide bonds, amidated C-terminus, TOXIN'
#
_struct_asym.id A
_struct_asym.pdbx_blank_PDB_chainid_flag N
_struct_asym.pdbx_modified N
_struct_asym.entity_id 1
_struct_asym.details ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code CXA1A_CONVC
_struct_ref.pdbx_db_accession P69747
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code GCCSDPRCNYDHPEIC
_struct_ref.pdbx_align_begin 50
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2H8S
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 16
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P69747
_struct_ref_seq.db_align_beg 50
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 65
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 16
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
_struct_conf.conf_type_id HELX_P
_struct_conf.id HELX_P1
_struct_conf.pdbx_PDB_helix_id 1
_struct_conf.beg_label_comp_id ASP
_struct_conf.beg_label_asym_id A
_struct_conf.beg_label_seq_id 5
_struct_conf.pdbx_beg_PDB_ins_code ?
_struct_conf.end_label_comp_id HIS
_struct_conf.end_label_asym_id A
_struct_conf.end_label_seq_id 12
_struct_conf.pdbx_end_PDB_ins_code ?
_struct_conf.beg_auth_comp_id ASP
_struct_conf.beg_auth_asym_id A
_struct_conf.beg_auth_seq_id 5
_struct_conf.end_auth_comp_id HIS
_struct_conf.end_auth_asym_id A
_struct_conf.end_auth_seq_id 12
_struct_conf.pdbx_PDB_helix_class 1
_struct_conf.details ?
_struct_conf.pdbx_PDB_helix_length 8
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 8 SG ? ? A CYS 2 A CYS 8 1_555 ? ? ? ? ? ? ? 2.031 ? ?
disulf2 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 16 SG ? ? A CYS 3 A CYS 16 1_555 ? ? ? ? ? ? ? 2.031 ? ?
covale1 covale both ? A CYS 16 C ? ? ? 1_555 A NH2 17 N ? ? A CYS 16 A NH2 17 1_555 ? ? ? ? ? ? ? 1.325 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 NH2 A 17 ? CYS A 16 ? NH2 A 17 ? 1_555 CYS A 16 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation'
2 CYS A 2 ? CYS A 8 ? CYS A 2 ? 1_555 CYS A 8 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS A 3 ? CYS A 16 ? CYS A 3 ? 1_555 CYS A 16 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
_struct_site.id AC1
_struct_site.pdbx_evidence_code Software
_struct_site.pdbx_auth_asym_id A
_struct_site.pdbx_auth_comp_id NH2
_struct_site.pdbx_auth_seq_id 17
_struct_site.pdbx_auth_ins_code ?
_struct_site.pdbx_num_residues 3
_struct_site.details 'BINDING SITE FOR RESIDUE NH2 A 17'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 3 PRO A 13 ? PRO A 13 . ? 1_555 ?
2 AC1 3 ILE A 15 ? ILE A 15 . ? 1_555 ?
3 AC1 3 CYS A 16 ? CYS A 16 . ? 1_555 ?
#
_pdbx_entry_details.entry_id 2H8S
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 OD2 A ASP 5 ? ? HH21 A ARG 7 ? ? 1.57
2 3 HH21 A ARG 7 ? ? OD2 A ASP 11 ? ? 1.58
3 5 OD2 A ASP 5 ? ? HH21 A ARG 7 ? ? 1.59
4 12 HH21 A ARG 7 ? ? OD1 A ASP 11 ? ? 1.58
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 HIS A 12 ? ? -118.95 73.52
2 5 HIS A 12 ? ? -116.79 76.68
3 8 HIS A 12 ? ? -117.83 75.59
4 10 HIS A 12 ? ? -117.52 77.94
5 11 HIS A 12 ? ? -119.11 74.89
6 14 HIS A 12 ? ? -119.11 67.06
7 18 HIS A 12 ? ? -117.20 78.30
#
_pdbx_nmr_ensemble.entry_id 2H8S
_pdbx_nmr_ensemble.conformers_calculated_total_number 50
_pdbx_nmr_ensemble.conformers_submitted_total_number 20
_pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy'
_pdbx_nmr_ensemble.average_constraints_per_residue ?
_pdbx_nmr_ensemble.average_constraint_violations_per_residue ?
_pdbx_nmr_ensemble.maximum_distance_constraint_violation ?
_pdbx_nmr_ensemble.average_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ?
_pdbx_nmr_ensemble.distance_constraint_violation_method ?
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ?
#
_pdbx_nmr_representative.entry_id 2H8S
_pdbx_nmr_representative.conformer_id 1
_pdbx_nmr_representative.selection_criteria 'lowest energy'
#
_pdbx_nmr_sample_details.solution_id 1
_pdbx_nmr_sample_details.contents 'approximately 1mM Vc1.1, 90% H2O, 10% D2O, pH 3.5'
_pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O'
#
_pdbx_nmr_exptl_sample_conditions.conditions_id 1
_pdbx_nmr_exptl_sample_conditions.temperature 280
_pdbx_nmr_exptl_sample_conditions.pressure ambient
_pdbx_nmr_exptl_sample_conditions.pH 3.5
_pdbx_nmr_exptl_sample_conditions.ionic_strength 0
_pdbx_nmr_exptl_sample_conditions.pressure_units .
_pdbx_nmr_exptl_sample_conditions.temperature_units K
#
loop_
_pdbx_nmr_exptl.experiment_id
_pdbx_nmr_exptl.conditions_id
_pdbx_nmr_exptl.type
_pdbx_nmr_exptl.solution_id
1 1 '2D NOESY' 1
2 1 '2D TOCSY' 1
3 1 DQF-COSY 1
4 1 E-COSY 1
#
_pdbx_nmr_refine.entry_id 2H8S
_pdbx_nmr_refine.method 'torsion angle dynamics'
_pdbx_nmr_refine.details ?
_pdbx_nmr_refine.software_ordinal 1
#
loop_
_pdbx_nmr_software.classification
_pdbx_nmr_software.name
_pdbx_nmr_software.version
_pdbx_nmr_software.authors
_pdbx_nmr_software.ordinal
collection XwinNMR 2.5 Bruker 1
processing XwinNMR 2.5 Bruker 2
'data analysis' Sparky 3.110 'Goddard and Kneller' 3
'structure solution' DYANA 1.5 Guntert 4
'structure solution' CNS 1.1 Brunger 5
refinement CNS 1.1 Brunger 6
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ARG N N N N 1
ARG CA C N S 2
ARG C C N N 3
ARG O O N N 4
ARG CB C N N 5
ARG CG C N N 6
ARG CD C N N 7
ARG NE N N N 8
ARG CZ C N N 9
ARG NH1 N N N 10
ARG NH2 N N N 11
ARG OXT O N N 12
ARG H H N N 13
ARG H2 H N N 14
ARG HA H N N 15
ARG HB2 H N N 16
ARG HB3 H N N 17
ARG HG2 H N N 18
ARG HG3 H N N 19
ARG HD2 H N N 20
ARG HD3 H N N 21
ARG HE H N N 22
ARG HH11 H N N 23
ARG HH12 H N N 24
ARG HH21 H N N 25
ARG HH22 H N N 26
ARG HXT H N N 27
ASN N N N N 28
ASN CA C N S 29
ASN C C N N 30
ASN O O N N 31
ASN CB C N N 32
ASN CG C N N 33
ASN OD1 O N N 34
ASN ND2 N N N 35
ASN OXT O N N 36
ASN H H N N 37
ASN H2 H N N 38
ASN HA H N N 39
ASN HB2 H N N 40
ASN HB3 H N N 41
ASN HD21 H N N 42
ASN HD22 H N N 43
ASN HXT H N N 44
ASP N N N N 45
ASP CA C N S 46
ASP C C N N 47
ASP O O N N 48
ASP CB C N N 49
ASP CG C N N 50
ASP OD1 O N N 51
ASP OD2 O N N 52
ASP OXT O N N 53
ASP H H N N 54
ASP H2 H N N 55
ASP HA H N N 56
ASP HB2 H N N 57
ASP HB3 H N N 58
ASP HD2 H N N 59
ASP HXT H N N 60
CYS N N N N 61
CYS CA C N R 62
CYS C C N N 63
CYS O O N N 64
CYS CB C N N 65
CYS SG S N N 66
CYS OXT O N N 67
CYS H H N N 68
CYS H2 H N N 69
CYS HA H N N 70
CYS HB2 H N N 71
CYS HB3 H N N 72
CYS HG H N N 73
CYS HXT H N N 74
GLU N N N N 75
GLU CA C N S 76
GLU C C N N 77
GLU O O N N 78
GLU CB C N N 79
GLU CG C N N 80
GLU CD C N N 81
GLU OE1 O N N 82
GLU OE2 O N N 83
GLU OXT O N N 84
GLU H H N N 85
GLU H2 H N N 86
GLU HA H N N 87
GLU HB2 H N N 88
GLU HB3 H N N 89
GLU HG2 H N N 90
GLU HG3 H N N 91
GLU HE2 H N N 92
GLU HXT H N N 93
GLY N N N N 94
GLY CA C N N 95
GLY C C N N 96
GLY O O N N 97
GLY OXT O N N 98
GLY H H N N 99
GLY H2 H N N 100
GLY HA2 H N N 101
GLY HA3 H N N 102
GLY HXT H N N 103
HIS N N N N 104
HIS CA C N S 105
HIS C C N N 106
HIS O O N N 107
HIS CB C N N 108
HIS CG C Y N 109
HIS ND1 N Y N 110
HIS CD2 C Y N 111
HIS CE1 C Y N 112
HIS NE2 N Y N 113
HIS OXT O N N 114
HIS H H N N 115
HIS H2 H N N 116
HIS HA H N N 117
HIS HB2 H N N 118
HIS HB3 H N N 119
HIS HD1 H N N 120
HIS HD2 H N N 121
HIS HE1 H N N 122
HIS HE2 H N N 123
HIS HXT H N N 124
ILE N N N N 125
ILE CA C N S 126
ILE C C N N 127
ILE O O N N 128
ILE CB C N S 129
ILE CG1 C N N 130
ILE CG2 C N N 131
ILE CD1 C N N 132
ILE OXT O N N 133
ILE H H N N 134
ILE H2 H N N 135
ILE HA H N N 136
ILE HB H N N 137
ILE HG12 H N N 138
ILE HG13 H N N 139
ILE HG21 H N N 140
ILE HG22 H N N 141
ILE HG23 H N N 142
ILE HD11 H N N 143
ILE HD12 H N N 144
ILE HD13 H N N 145
ILE HXT H N N 146
NH2 N N N N 147
NH2 HN1 H N N 148
NH2 HN2 H N N 149
PRO N N N N 150
PRO CA C N S 151
PRO C C N N 152
PRO O O N N 153
PRO CB C N N 154
PRO CG C N N 155
PRO CD C N N 156
PRO OXT O N N 157
PRO H H N N 158
PRO HA H N N 159
PRO HB2 H N N 160
PRO HB3 H N N 161
PRO HG2 H N N 162
PRO HG3 H N N 163
PRO HD2 H N N 164
PRO HD3 H N N 165
PRO HXT H N N 166
SER N N N N 167
SER CA C N S 168
SER C C N N 169
SER O O N N 170
SER CB C N N 171
SER OG O N N 172
SER OXT O N N 173
SER H H N N 174
SER H2 H N N 175
SER HA H N N 176
SER HB2 H N N 177
SER HB3 H N N 178
SER HG H N N 179
SER HXT H N N 180
TYR N N N N 181
TYR CA C N S 182
TYR C C N N 183
TYR O O N N 184
TYR CB C N N 185
TYR CG C Y N 186
TYR CD1 C Y N 187
TYR CD2 C Y N 188
TYR CE1 C Y N 189
TYR CE2 C Y N 190
TYR CZ C Y N 191
TYR OH O N N 192
TYR OXT O N N 193
TYR H H N N 194
TYR H2 H N N 195
TYR HA H N N 196
TYR HB2 H N N 197
TYR HB3 H N N 198
TYR HD1 H N N 199
TYR HD2 H N N 200
TYR HE1 H N N 201
TYR HE2 H N N 202
TYR HH H N N 203
TYR HXT H N N 204
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ARG N CA sing N N 1
ARG N H sing N N 2
ARG N H2 sing N N 3
ARG CA C sing N N 4
ARG CA CB sing N N 5
ARG CA HA sing N N 6
ARG C O doub N N 7
ARG C OXT sing N N 8
ARG CB CG sing N N 9
ARG CB HB2 sing N N 10
ARG CB HB3 sing N N 11
ARG CG CD sing N N 12
ARG CG HG2 sing N N 13
ARG CG HG3 sing N N 14
ARG CD NE sing N N 15
ARG CD HD2 sing N N 16
ARG CD HD3 sing N N 17
ARG NE CZ sing N N 18
ARG NE HE sing N N 19
ARG CZ NH1 sing N N 20
ARG CZ NH2 doub N N 21
ARG NH1 HH11 sing N N 22
ARG NH1 HH12 sing N N 23
ARG NH2 HH21 sing N N 24
ARG NH2 HH22 sing N N 25
ARG OXT HXT sing N N 26
ASN N CA sing N N 27
ASN N H sing N N 28
ASN N H2 sing N N 29
ASN CA C sing N N 30
ASN CA CB sing N N 31
ASN CA HA sing N N 32
ASN C O doub N N 33
ASN C OXT sing N N 34
ASN CB CG sing N N 35
ASN CB HB2 sing N N 36
ASN CB HB3 sing N N 37
ASN CG OD1 doub N N 38
ASN CG ND2 sing N N 39
ASN ND2 HD21 sing N N 40
ASN ND2 HD22 sing N N 41
ASN OXT HXT sing N N 42
ASP N CA sing N N 43
ASP N H sing N N 44
ASP N H2 sing N N 45
ASP CA C sing N N 46
ASP CA CB sing N N 47
ASP CA HA sing N N 48
ASP C O doub N N 49
ASP C OXT sing N N 50
ASP CB CG sing N N 51
ASP CB HB2 sing N N 52
ASP CB HB3 sing N N 53
ASP CG OD1 doub N N 54
ASP CG OD2 sing N N 55
ASP OD2 HD2 sing N N 56
ASP OXT HXT sing N N 57
CYS N CA sing N N 58
CYS N H sing N N 59
CYS N H2 sing N N 60
CYS CA C sing N N 61
CYS CA CB sing N N 62
CYS CA HA sing N N 63
CYS C O doub N N 64
CYS C OXT sing N N 65
CYS CB SG sing N N 66
CYS CB HB2 sing N N 67
CYS CB HB3 sing N N 68
CYS SG HG sing N N 69
CYS OXT HXT sing N N 70
GLU N CA sing N N 71
GLU N H sing N N 72
GLU N H2 sing N N 73
GLU CA C sing N N 74
GLU CA CB sing N N 75
GLU CA HA sing N N 76
GLU C O doub N N 77
GLU C OXT sing N N 78
GLU CB CG sing N N 79
GLU CB HB2 sing N N 80
GLU CB HB3 sing N N 81
GLU CG CD sing N N 82
GLU CG HG2 sing N N 83
GLU CG HG3 sing N N 84
GLU CD OE1 doub N N 85
GLU CD OE2 sing N N 86
GLU OE2 HE2 sing N N 87
GLU OXT HXT sing N N 88
GLY N CA sing N N 89
GLY N H sing N N 90
GLY N H2 sing N N 91
GLY CA C sing N N 92
GLY CA HA2 sing N N 93
GLY CA HA3 sing N N 94
GLY C O doub N N 95
GLY C OXT sing N N 96
GLY OXT HXT sing N N 97
HIS N CA sing N N 98
HIS N H sing N N 99
HIS N H2 sing N N 100
HIS CA C sing N N 101
HIS CA CB sing N N 102
HIS CA HA sing N N 103
HIS C O doub N N 104
HIS C OXT sing N N 105
HIS CB CG sing N N 106
HIS CB HB2 sing N N 107
HIS CB HB3 sing N N 108
HIS CG ND1 sing Y N 109
HIS CG CD2 doub Y N 110
HIS ND1 CE1 doub Y N 111
HIS ND1 HD1 sing N N 112
HIS CD2 NE2 sing Y N 113
HIS CD2 HD2 sing N N 114
HIS CE1 NE2 sing Y N 115
HIS CE1 HE1 sing N N 116
HIS NE2 HE2 sing N N 117
HIS OXT HXT sing N N 118
ILE N CA sing N N 119
ILE N H sing N N 120
ILE N H2 sing N N 121
ILE CA C sing N N 122
ILE CA CB sing N N 123
ILE CA HA sing N N 124
ILE C O doub N N 125
ILE C OXT sing N N 126
ILE CB CG1 sing N N 127
ILE CB CG2 sing N N 128
ILE CB HB sing N N 129
ILE CG1 CD1 sing N N 130
ILE CG1 HG12 sing N N 131
ILE CG1 HG13 sing N N 132
ILE CG2 HG21 sing N N 133
ILE CG2 HG22 sing N N 134
ILE CG2 HG23 sing N N 135
ILE CD1 HD11 sing N N 136
ILE CD1 HD12 sing N N 137
ILE CD1 HD13 sing N N 138
ILE OXT HXT sing N N 139
NH2 N HN1 sing N N 140
NH2 N HN2 sing N N 141
PRO N CA sing N N 142
PRO N CD sing N N 143
PRO N H sing N N 144
PRO CA C sing N N 145
PRO CA CB sing N N 146
PRO CA HA sing N N 147
PRO C O doub N N 148
PRO C OXT sing N N 149
PRO CB CG sing N N 150
PRO CB HB2 sing N N 151
PRO CB HB3 sing N N 152
PRO CG CD sing N N 153
PRO CG HG2 sing N N 154
PRO CG HG3 sing N N 155
PRO CD HD2 sing N N 156
PRO CD HD3 sing N N 157
PRO OXT HXT sing N N 158
SER N CA sing N N 159
SER N H sing N N 160
SER N H2 sing N N 161
SER CA C sing N N 162
SER CA CB sing N N 163
SER CA HA sing N N 164
SER C O doub N N 165
SER C OXT sing N N 166
SER CB OG sing N N 167
SER CB HB2 sing N N 168
SER CB HB3 sing N N 169
SER OG HG sing N N 170
SER OXT HXT sing N N 171
TYR N CA sing N N 172
TYR N H sing N N 173
TYR N H2 sing N N 174
TYR CA C sing N N 175
TYR CA CB sing N N 176
TYR CA HA sing N N 177
TYR C O doub N N 178
TYR C OXT sing N N 179
TYR CB CG sing N N 180
TYR CB HB2 sing N N 181
TYR CB HB3 sing N N 182
TYR CG CD1 doub Y N 183
TYR CG CD2 sing Y N 184
TYR CD1 CE1 sing Y N 185
TYR CD1 HD1 sing N N 186
TYR CD2 CE2 doub Y N 187
TYR CD2 HD2 sing N N 188
TYR CE1 CZ doub Y N 189
TYR CE1 HE1 sing N N 190
TYR CE2 CZ sing Y N 191
TYR CE2 HE2 sing N N 192
TYR CZ OH sing N N 193
TYR OH HH sing N N 194
TYR OXT HXT sing N N 195
#
loop_
_pdbx_nmr_spectrometer.spectrometer_id
_pdbx_nmr_spectrometer.model
_pdbx_nmr_spectrometer.manufacturer
_pdbx_nmr_spectrometer.field_strength
_pdbx_nmr_spectrometer.type
1 AVANCE Bruker 600 ?
2 AVANCE Bruker 500 ?
#
_atom_sites.entry_id 2H8S
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
N
O
S
#
loop_