data_2H9C # _entry.id 2H9C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2H9C RCSB RCSB038092 WWPDB D_1000038092 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2h9d _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2H9C _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lamb, A.L.' 1 'Zaitseva, J.' 2 'Lu, J.' 3 # _citation.id primary _citation.title 'Two Crystal Structures of the Isochorismate Pyruvate Lyase from Pseudomonas aeruginosa.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 281 _citation.page_first 33441 _citation.page_last 33449 _citation.year 2006 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16914555 _citation.pdbx_database_id_DOI 10.1074/jbc.M605470200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zaitseva, J.' 1 primary 'Lu, J.' 2 primary 'Olechoski, K.L.' 3 primary 'Lamb, A.L.' 4 # _cell.entry_id 2H9C _cell.length_a 93.148 _cell.length_b 93.148 _cell.length_c 60.190 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2H9C _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Salicylate biosynthesis protein pchB' 11304.909 2 4.1.99.- ? 'residues 1-99' ? 2 non-polymer syn 'NITRATE ION' 62.005 5 ? ? ? ? 3 water nat water 18.015 55 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Isochorismate-Pyruvate Lyase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFA QIIHWYIAEQIKYWRQTRG ; _entity_poly.pdbx_seq_one_letter_code_can ;MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFA QIIHWYIAEQIKYWRQTRG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 THR n 1 4 PRO n 1 5 GLU n 1 6 ASP n 1 7 CYS n 1 8 THR n 1 9 GLY n 1 10 LEU n 1 11 ALA n 1 12 ASP n 1 13 ILE n 1 14 ARG n 1 15 GLU n 1 16 ALA n 1 17 ILE n 1 18 ASP n 1 19 ARG n 1 20 ILE n 1 21 ASP n 1 22 LEU n 1 23 ASP n 1 24 ILE n 1 25 VAL n 1 26 GLN n 1 27 ALA n 1 28 LEU n 1 29 GLY n 1 30 ARG n 1 31 ARG n 1 32 MET n 1 33 ASP n 1 34 TYR n 1 35 VAL n 1 36 LYS n 1 37 ALA n 1 38 ALA n 1 39 SER n 1 40 ARG n 1 41 PHE n 1 42 LYS n 1 43 ALA n 1 44 SER n 1 45 GLU n 1 46 ALA n 1 47 ALA n 1 48 ILE n 1 49 PRO n 1 50 ALA n 1 51 PRO n 1 52 GLU n 1 53 ARG n 1 54 VAL n 1 55 ALA n 1 56 ALA n 1 57 MET n 1 58 LEU n 1 59 PRO n 1 60 GLU n 1 61 ARG n 1 62 ALA n 1 63 ARG n 1 64 TRP n 1 65 ALA n 1 66 GLU n 1 67 GLU n 1 68 ASN n 1 69 GLY n 1 70 LEU n 1 71 ASP n 1 72 ALA n 1 73 PRO n 1 74 PHE n 1 75 VAL n 1 76 GLU n 1 77 GLY n 1 78 LEU n 1 79 PHE n 1 80 ALA n 1 81 GLN n 1 82 ILE n 1 83 ILE n 1 84 HIS n 1 85 TRP n 1 86 TYR n 1 87 ILE n 1 88 ALA n 1 89 GLU n 1 90 GLN n 1 91 ILE n 1 92 LYS n 1 93 TYR n 1 94 TRP n 1 95 ARG n 1 96 GLN n 1 97 THR n 1 98 ARG n 1 99 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pseudomonas _entity_src_gen.pdbx_gene_src_gene PchB _entity_src_gen.gene_src_species 'Pseudomonas aeruginosa' _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET29b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PCHB_PSEAE _struct_ref.pdbx_db_accession Q51507 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFA QIIHWYIAEQIKYWRQTRG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2H9C A 1 ? 99 ? Q51507 1 ? 99 ? 1 99 2 1 2H9C B 1 ? 99 ? Q51507 1 ? 99 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2H9C _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.97 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1 M acetate buffer, 4.8 - 5.3 M ammonium nitrate, pH 4.7, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 138 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-06-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'osmic mirrors' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2H9C _reflns.d_resolution_high 2.350 _reflns.d_resolution_low 28.9 _reflns.number_obs 11526 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 12.600 _reflns.pdbx_chi_squared 0.942 _reflns.pdbx_redundancy 9.200 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 37.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.378 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.913 _reflns_shell.pdbx_redundancy 9.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1120 _reflns_shell.percent_possible_all 100.00 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2H9C _refine.ls_d_res_high 2.350 _refine.ls_d_res_low 28.9 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.700 _refine.ls_number_reflns_obs 11246 _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.269 _refine.ls_percent_reflns_R_free 10.100 _refine.ls_number_reflns_R_free 1162 _refine.B_iso_mean 42.792 _refine.solvent_model_param_bsol 44.597 _refine.aniso_B[1][1] 2.488 _refine.aniso_B[2][2] 2.488 _refine.aniso_B[3][3] -4.977 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.overall_FOM_work_R_set 0.806 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 11515 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.224 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1ECM' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1397 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1472 _refine_hist.d_res_high 2.350 _refine_hist.d_res_low 28.9 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.451 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.166 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.402 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.313 2.500 ? 'X-RAY DIFFRACTION' ? c_bond_d ? 0.006 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.08 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.350 2.390 23 . 393 . 0.246 0.29 . 57 . . 450 . 'X-RAY DIFFRACTION' 2.390 2.420 23 . 410 . 0.238 0.353 . 50 . . 460 . 'X-RAY DIFFRACTION' 2.420 2.460 23 . 422 . 0.249 0.354 . 50 . . 472 . 'X-RAY DIFFRACTION' 2.460 2.500 23 . 430 . 0.241 0.232 . 39 . . 469 . 'X-RAY DIFFRACTION' 2.500 2.550 23 . 412 . 0.22 0.315 . 50 . . 462 . 'X-RAY DIFFRACTION' 2.550 2.600 23 . 413 . 0.252 0.322 . 58 . . 471 . 'X-RAY DIFFRACTION' 2.600 2.650 23 . 439 . 0.246 0.353 . 43 . . 482 . 'X-RAY DIFFRACTION' 2.650 2.710 23 . 406 . 0.23 0.256 . 60 . . 466 . 'X-RAY DIFFRACTION' 2.710 2.770 23 . 440 . 0.238 0.324 . 45 . . 485 . 'X-RAY DIFFRACTION' 2.770 2.840 23 . 427 . 0.231 0.276 . 56 . . 483 . 'X-RAY DIFFRACTION' 2.840 2.920 23 . 436 . 0.238 0.382 . 58 . . 494 . 'X-RAY DIFFRACTION' 2.920 3.000 23 . 456 . 0.244 0.335 . 43 . . 499 . 'X-RAY DIFFRACTION' 3.000 3.100 23 . 415 . 0.229 0.275 . 53 . . 468 . 'X-RAY DIFFRACTION' 3.100 3.210 23 . 450 . 0.242 0.232 . 41 . . 491 . 'X-RAY DIFFRACTION' 3.210 3.340 23 . 449 . 0.247 0.379 . 48 . . 497 . 'X-RAY DIFFRACTION' 3.340 3.490 23 . 435 . 0.216 0.218 . 51 . . 486 . 'X-RAY DIFFRACTION' 3.490 3.680 23 . 445 . 0.195 0.212 . 45 . . 490 . 'X-RAY DIFFRACTION' 3.680 3.910 23 . 460 . 0.185 0.232 . 42 . . 502 . 'X-RAY DIFFRACTION' 3.910 4.210 23 . 461 . 0.179 0.204 . 44 . . 505 . 'X-RAY DIFFRACTION' 4.210 4.630 23 . 468 . 0.188 0.263 . 45 . . 513 . 'X-RAY DIFFRACTION' 4.630 5.300 23 . 453 . 0.199 0.23 . 60 . . 513 . 'X-RAY DIFFRACTION' 5.300 6.680 23 . 465 . 0.304 0.357 . 64 . . 529 . 'X-RAY DIFFRACTION' 6.680 100.000 23 . 499 . 0.251 0.229 . 60 . . 559 . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 water_rep.param ? 'X-RAY DIFFRACTION' 3 nitrate.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2H9C _struct.title 'Native Crystal Structure of the Isochorismate-Pyruvate Lyase from Pseudomonas aeruginosa' _struct.pdbx_descriptor 'Salicylate biosynthesis protein pchB (E.C.4.1.99.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2H9C _struct_keywords.pdbx_keywords LYASE _struct_keywords.text 'intertwinded dimer, LYASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The asymmetric unit contains one dimer, which is the biological asssembly.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 9 ? ARG A 40 ? GLY A 9 ARG A 40 1 ? 32 HELX_P HELX_P2 2 ALA A 50 ? ASN A 68 ? ALA A 50 ASN A 68 1 ? 19 HELX_P HELX_P3 3 ASP A 71 ? ARG A 95 ? ASP A 71 ARG A 95 1 ? 25 HELX_P HELX_P4 4 THR B 3 ? CYS B 7 ? THR B 3 CYS B 7 5 ? 5 HELX_P HELX_P5 5 GLY B 9 ? ALA B 38 ? GLY B 9 ALA B 38 1 ? 30 HELX_P HELX_P6 6 SER B 39 ? PHE B 41 ? SER B 39 PHE B 41 5 ? 3 HELX_P HELX_P7 7 ALA B 50 ? ASN B 68 ? ALA B 50 ASN B 68 1 ? 19 HELX_P HELX_P8 8 ASP B 71 ? LYS B 92 ? ASP B 71 LYS B 92 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NO3 A 100' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NO3 B 100' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NO3 A 101' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NO3 A 102' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NO3 A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 31 ? ARG A 31 . ? 1_555 ? 2 AC1 6 ARG A 53 ? ARG A 53 . ? 1_555 ? 3 AC1 6 MET A 57 ? MET A 57 . ? 1_555 ? 4 AC1 6 ILE A 83 ? ILE A 83 . ? 1_555 ? 5 AC1 6 TYR A 86 ? TYR A 86 . ? 1_555 ? 6 AC1 6 ILE B 17 ? ILE B 17 . ? 1_555 ? 7 AC2 4 ARG B 31 ? ARG B 31 . ? 1_555 ? 8 AC2 4 PRO B 49 ? PRO B 49 . ? 1_555 ? 9 AC2 4 MET B 57 ? MET B 57 . ? 1_555 ? 10 AC2 4 HOH I . ? HOH B 101 . ? 1_555 ? 11 AC3 6 GLN A 26 ? GLN A 26 . ? 1_555 ? 12 AC3 6 GLY B 9 ? GLY B 9 . ? 4_555 ? 13 AC3 6 ALA B 11 ? ALA B 11 . ? 4_555 ? 14 AC3 6 ASP B 12 ? ASP B 12 . ? 4_555 ? 15 AC3 6 GLU B 67 ? GLU B 67 . ? 1_555 ? 16 AC3 6 ASN B 68 ? ASN B 68 . ? 1_555 ? 17 AC4 6 LYS A 36 ? LYS A 36 . ? 1_555 ? 18 AC4 6 ALA A 37 ? ALA A 37 . ? 1_555 ? 19 AC4 6 ARG A 40 ? ARG A 40 . ? 1_555 ? 20 AC4 6 HOH H . ? HOH A 120 . ? 1_555 ? 21 AC4 6 PRO B 4 ? PRO B 4 . ? 1_555 ? 22 AC4 6 GLU B 5 ? GLU B 5 . ? 1_555 ? 23 AC5 4 GLN A 26 ? GLN A 26 . ? 1_555 ? 24 AC5 4 ARG A 30 ? ARG A 30 . ? 1_555 ? 25 AC5 4 LYS B 2 ? LYS B 2 . ? 4_555 ? 26 AC5 4 THR B 8 ? THR B 8 . ? 4_555 ? # _atom_sites.entry_id 2H9C _atom_sites.fract_transf_matrix[1][1] 0.010736 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010736 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016614 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 LYS 42 42 ? ? ? A . n A 1 43 ALA 43 43 ? ? ? A . n A 1 44 SER 44 44 ? ? ? A . n A 1 45 GLU 45 45 ? ? ? A . n A 1 46 ALA 46 46 ? ? ? A . n A 1 47 ALA 47 47 ? ? ? A . n A 1 48 ILE 48 48 ? ? ? A . n A 1 49 PRO 49 49 ? ? ? A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 TRP 64 64 64 TRP TRP A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 TRP 85 85 85 TRP TRP A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 THR 97 97 ? ? ? A . n A 1 98 ARG 98 98 ? ? ? A . n A 1 99 GLY 99 99 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 ASP 6 6 6 ASP ASP B . n B 1 7 CYS 7 7 7 CYS CYS B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 ILE 17 17 17 ILE ILE B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 ILE 20 20 20 ILE ILE B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 ASP 23 23 23 ASP ASP B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 GLN 26 26 26 GLN GLN B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 MET 32 32 32 MET MET B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 TYR 34 34 34 TYR TYR B . n B 1 35 VAL 35 35 35 VAL VAL B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 ARG 40 40 40 ARG ARG B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 LYS 42 42 ? ? ? B . n B 1 43 ALA 43 43 ? ? ? B . n B 1 44 SER 44 44 ? ? ? B . n B 1 45 GLU 45 45 ? ? ? B . n B 1 46 ALA 46 46 ? ? ? B . n B 1 47 ALA 47 47 ? ? ? B . n B 1 48 ILE 48 48 ? ? ? B . n B 1 49 PRO 49 49 49 PRO PRO B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 PRO 51 51 51 PRO PRO B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 MET 57 57 57 MET MET B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 ALA 62 62 62 ALA ALA B . n B 1 63 ARG 63 63 63 ARG ARG B . n B 1 64 TRP 64 64 64 TRP TRP B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 GLY 69 69 69 GLY GLY B . n B 1 70 LEU 70 70 70 LEU LEU B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 GLU 76 76 76 GLU GLU B . n B 1 77 GLY 77 77 77 GLY GLY B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 ALA 80 80 80 ALA ALA B . n B 1 81 GLN 81 81 81 GLN GLN B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 ILE 83 83 83 ILE ILE B . n B 1 84 HIS 84 84 84 HIS HIS B . n B 1 85 TRP 85 85 85 TRP TRP B . n B 1 86 TYR 86 86 86 TYR TYR B . n B 1 87 ILE 87 87 87 ILE ILE B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 GLN 90 90 90 GLN GLN B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 LYS 92 92 92 LYS LYS B . n B 1 93 TYR 93 93 ? ? ? B . n B 1 94 TRP 94 94 ? ? ? B . n B 1 95 ARG 95 95 ? ? ? B . n B 1 96 GLN 96 96 ? ? ? B . n B 1 97 THR 97 97 ? ? ? B . n B 1 98 ARG 98 98 ? ? ? B . n B 1 99 GLY 99 99 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 1 100 61 NO3 NO3 A . D 2 NO3 1 101 63 NO3 NO3 A . E 2 NO3 1 102 64 NO3 NO3 A . F 2 NO3 1 103 65 NO3 NO3 A . G 2 NO3 1 100 62 NO3 NO3 B . H 3 HOH 1 104 1 HOH HOH A . H 3 HOH 2 105 6 HOH HOH A . H 3 HOH 3 106 9 HOH HOH A . H 3 HOH 4 107 10 HOH HOH A . H 3 HOH 5 108 11 HOH HOH A . H 3 HOH 6 109 12 HOH HOH A . H 3 HOH 7 110 13 HOH HOH A . H 3 HOH 8 111 14 HOH HOH A . H 3 HOH 9 112 15 HOH HOH A . H 3 HOH 10 113 17 HOH HOH A . H 3 HOH 11 114 18 HOH HOH A . H 3 HOH 12 115 19 HOH HOH A . H 3 HOH 13 116 22 HOH HOH A . H 3 HOH 14 117 23 HOH HOH A . H 3 HOH 15 118 27 HOH HOH A . H 3 HOH 16 119 30 HOH HOH A . H 3 HOH 17 120 32 HOH HOH A . H 3 HOH 18 121 34 HOH HOH A . H 3 HOH 19 122 42 HOH HOH A . H 3 HOH 20 123 44 HOH HOH A . H 3 HOH 21 124 50 HOH HOH A . H 3 HOH 22 125 51 HOH HOH A . H 3 HOH 23 126 52 HOH HOH A . H 3 HOH 24 127 53 HOH HOH A . H 3 HOH 25 128 54 HOH HOH A . I 3 HOH 1 101 2 HOH HOH B . I 3 HOH 2 102 3 HOH HOH B . I 3 HOH 3 103 4 HOH HOH B . I 3 HOH 4 104 5 HOH HOH B . I 3 HOH 5 105 7 HOH HOH B . I 3 HOH 6 106 8 HOH HOH B . I 3 HOH 7 107 16 HOH HOH B . I 3 HOH 8 108 20 HOH HOH B . I 3 HOH 9 109 21 HOH HOH B . I 3 HOH 10 110 24 HOH HOH B . I 3 HOH 11 111 25 HOH HOH B . I 3 HOH 12 112 26 HOH HOH B . I 3 HOH 13 113 28 HOH HOH B . I 3 HOH 14 114 29 HOH HOH B . I 3 HOH 15 115 31 HOH HOH B . I 3 HOH 16 116 33 HOH HOH B . I 3 HOH 17 117 35 HOH HOH B . I 3 HOH 18 118 36 HOH HOH B . I 3 HOH 19 119 37 HOH HOH B . I 3 HOH 20 120 38 HOH HOH B . I 3 HOH 21 121 39 HOH HOH B . I 3 HOH 22 122 40 HOH HOH B . I 3 HOH 23 123 41 HOH HOH B . I 3 HOH 24 124 43 HOH HOH B . I 3 HOH 25 125 45 HOH HOH B . I 3 HOH 26 126 46 HOH HOH B . I 3 HOH 27 127 47 HOH HOH B . I 3 HOH 28 128 48 HOH HOH B . I 3 HOH 29 129 49 HOH HOH B . I 3 HOH 30 130 55 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5460 ? 1 MORE -29 ? 1 'SSA (A^2)' 9550 ? 2 'ABSA (A^2)' 13700 ? 2 MORE -86 ? 2 'SSA (A^2)' 16330 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.350 _diffrn_reflns.pdbx_d_res_low 100.000 _diffrn_reflns.pdbx_number_obs 11526 _diffrn_reflns.pdbx_Rmerge_I_obs 0.067 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 0.94 _diffrn_reflns.av_sigmaI_over_netI 12.60 _diffrn_reflns.pdbx_redundancy 9.20 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 106446 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.06 100.00 ? ? 0.033 ? 0.800 8.60 99.00 1 4.02 5.06 ? ? 0.041 ? 0.905 9.30 99.90 1 3.51 4.02 ? ? 0.049 ? 0.984 9.30 100.00 1 3.19 3.51 ? ? 0.069 ? 1.016 9.40 99.90 1 2.96 3.19 ? ? 0.102 ? 0.987 9.40 100.00 1 2.79 2.96 ? ? 0.139 ? 0.983 9.40 100.00 1 2.65 2.79 ? ? 0.179 ? 0.937 9.40 99.90 1 2.53 2.65 ? ? 0.238 ? 0.956 9.30 100.00 1 2.43 2.53 ? ? 0.307 ? 0.935 9.20 100.00 1 2.35 2.43 ? ? 0.378 ? 0.913 9.00 100.00 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 CrystalClear '(MSC/RIGAKU)' ? ? ? ? 'data reduction' ? ? ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 107 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 107 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_555 _pdbx_validate_symm_contact.dist 2.12 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 40 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -89.35 _pdbx_validate_torsion.psi 39.33 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 42 ? A LYS 42 2 1 Y 1 A ALA 43 ? A ALA 43 3 1 Y 1 A SER 44 ? A SER 44 4 1 Y 1 A GLU 45 ? A GLU 45 5 1 Y 1 A ALA 46 ? A ALA 46 6 1 Y 1 A ALA 47 ? A ALA 47 7 1 Y 1 A ILE 48 ? A ILE 48 8 1 Y 1 A PRO 49 ? A PRO 49 9 1 Y 1 A THR 97 ? A THR 97 10 1 Y 1 A ARG 98 ? A ARG 98 11 1 Y 1 A GLY 99 ? A GLY 99 12 1 Y 1 B LYS 42 ? B LYS 42 13 1 Y 1 B ALA 43 ? B ALA 43 14 1 Y 1 B SER 44 ? B SER 44 15 1 Y 1 B GLU 45 ? B GLU 45 16 1 Y 1 B ALA 46 ? B ALA 46 17 1 Y 1 B ALA 47 ? B ALA 47 18 1 Y 1 B ILE 48 ? B ILE 48 19 1 Y 1 B TYR 93 ? B TYR 93 20 1 Y 1 B TRP 94 ? B TRP 94 21 1 Y 1 B ARG 95 ? B ARG 95 22 1 Y 1 B GLN 96 ? B GLN 96 23 1 Y 1 B THR 97 ? B THR 97 24 1 Y 1 B ARG 98 ? B ARG 98 25 1 Y 1 B GLY 99 ? B GLY 99 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 water HOH #