data_2HAP # _entry.id 2HAP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HAP pdb_00002hap 10.2210/pdb2hap/pdb RCSB PD0090 ? ? WWPDB D_1000178165 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-11-10 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 17 5 'Structure model' '_pdbx_struct_conn_angle.value' 18 5 'Structure model' '_struct_conn.pdbx_dist_value' 19 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 5 'Structure model' '_struct_conn.ptnr1_symmetry' 26 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_symmetry' 33 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HAP _pdbx_database_status.recvd_initial_deposition_date 1998-09-17 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'King, D.A.' 1 'Zhang, L.' 2 'Guarente, L.' 3 'Marmorstein, R.' 4 # _citation.id primary _citation.title 'Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 6 _citation.page_first 22 _citation.page_last 27 _citation.year 1999 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9886287 _citation.pdbx_database_id_DOI 10.1038/4893 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'King, D.A.' 1 ? primary 'Zhang, L.' 2 ? primary 'Guarente, L.' 3 ? primary 'Marmorstein, R.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP*T)-3') ; 6098.964 1 ? ? 'UPSTREAM ACTIVATION SEQUENCE' ? 2 polymer syn ;DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP*T)-3') ; 6166.030 1 ? ? 'UPSTREAM ACTIVATION SEQUENCE' ? 3 polymer man 'PROTEIN (HEME ACTIVATOR PROTEIN)' 9696.518 2 ? ? 'DNA-BINDING DOMAIN' ? 4 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 5 water nat water 18.015 74 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'UAS CYC7' 2 'UAS CYC7' 3 HAP1.18 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DC)(DT)(DA)(DT)(DT)(DA)(DT)(DC)(DG)(DC)(DT)(DA)(DT)(DT)(DA)(DG)(DT)' ACGCTATTATCGCTATTAGT A ? 2 polydeoxyribonucleotide no no '(DA)(DC)(DT)(DA)(DA)(DT)(DA)(DG)(DC)(DG)(DA)(DT)(DA)(DA)(DT)(DA)(DG)(DC)(DG)(DT)' ACTAATAGCGATAATAGCGT B ? 3 'polypeptide(L)' no no ;RKRNRIPLRCTICRKRKVKCDKLRPHCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNELKKLRERVKSLEKTLSKVHSS P ; ;RKRNRIPLRCTICRKRKVKCDKLRPHCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNELKKLRERVKSLEKTLSKVHSS P ; C,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DT n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DA n 1 10 DT n 1 11 DC n 1 12 DG n 1 13 DC n 1 14 DT n 1 15 DA n 1 16 DT n 1 17 DT n 1 18 DA n 1 19 DG n 1 20 DT n 2 1 DA n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DG n 2 9 DC n 2 10 DG n 2 11 DA n 2 12 DT n 2 13 DA n 2 14 DA n 2 15 DT n 2 16 DA n 2 17 DG n 2 18 DC n 2 19 DG n 2 20 DT n 3 1 ARG n 3 2 LYS n 3 3 ARG n 3 4 ASN n 3 5 ARG n 3 6 ILE n 3 7 PRO n 3 8 LEU n 3 9 ARG n 3 10 CYS n 3 11 THR n 3 12 ILE n 3 13 CYS n 3 14 ARG n 3 15 LYS n 3 16 ARG n 3 17 LYS n 3 18 VAL n 3 19 LYS n 3 20 CYS n 3 21 ASP n 3 22 LYS n 3 23 LEU n 3 24 ARG n 3 25 PRO n 3 26 HIS n 3 27 CYS n 3 28 GLN n 3 29 GLN n 3 30 CYS n 3 31 THR n 3 32 LYS n 3 33 THR n 3 34 GLY n 3 35 VAL n 3 36 ALA n 3 37 HIS n 3 38 LEU n 3 39 CYS n 3 40 HIS n 3 41 TYR n 3 42 MET n 3 43 GLU n 3 44 GLN n 3 45 THR n 3 46 TRP n 3 47 ALA n 3 48 GLU n 3 49 GLU n 3 50 ALA n 3 51 GLU n 3 52 LYS n 3 53 GLU n 3 54 LEU n 3 55 LEU n 3 56 LYS n 3 57 ASP n 3 58 ASN n 3 59 GLU n 3 60 LEU n 3 61 LYS n 3 62 LYS n 3 63 LEU n 3 64 ARG n 3 65 GLU n 3 66 ARG n 3 67 VAL n 3 68 LYS n 3 69 SER n 3 70 LEU n 3 71 GLU n 3 72 LYS n 3 73 THR n 3 74 LEU n 3 75 SER n 3 76 LYS n 3 77 VAL n 3 78 HIS n 3 79 SER n 3 80 SER n 3 81 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BWG-1-7A-DCYC1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (LYSS)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type LAC _entity_src_gen.pdbx_host_org_vector PRESET-A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'SEQUENCE FROM SACCHAROMYCES CEREVISIAE' 2 1 sample ? ? ? ? ? 'SEQUENCE FROM SACCHAROMYCES CEREVISIAE' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DT 10 10 10 DT T A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DG 12 12 12 DG G A . n A 1 13 DC 13 13 13 DC C A . n A 1 14 DT 14 14 14 DT T A . n A 1 15 DA 15 15 15 DA A A . n A 1 16 DT 16 16 16 DT T A . n A 1 17 DT 17 17 17 DT T A . n A 1 18 DA 18 18 18 DA A A . n A 1 19 DG 19 19 19 DG G A . n A 1 20 DT 20 20 20 DT T A . n B 2 1 DA 1 1 1 DA A B . n B 2 2 DC 2 2 2 DC C B . n B 2 3 DT 3 3 3 DT T B . n B 2 4 DA 4 4 4 DA A B . n B 2 5 DA 5 5 5 DA A B . n B 2 6 DT 6 6 6 DT T B . n B 2 7 DA 7 7 7 DA A B . n B 2 8 DG 8 8 8 DG G B . n B 2 9 DC 9 9 9 DC C B . n B 2 10 DG 10 10 10 DG G B . n B 2 11 DA 11 11 11 DA A B . n B 2 12 DT 12 12 12 DT T B . n B 2 13 DA 13 13 13 DA A B . n B 2 14 DA 14 14 14 DA A B . n B 2 15 DT 15 15 15 DT T B . n B 2 16 DA 16 16 16 DA A B . n B 2 17 DG 17 17 17 DG G B . n B 2 18 DC 18 18 18 DC C B . n B 2 19 DG 19 19 19 DG G B . n B 2 20 DT 20 20 20 DT T B . n C 3 1 ARG 1 55 55 ARG ARG C . n C 3 2 LYS 2 56 56 LYS LYS C . n C 3 3 ARG 3 57 57 ARG ARG C . n C 3 4 ASN 4 58 58 ASN ASN C . n C 3 5 ARG 5 59 59 ARG ARG C . n C 3 6 ILE 6 60 60 ILE ILE C . n C 3 7 PRO 7 61 61 PRO PRO C . n C 3 8 LEU 8 62 62 LEU LEU C . n C 3 9 ARG 9 63 63 ARG ARG C . n C 3 10 CYS 10 64 64 CYS CYS C . n C 3 11 THR 11 65 65 THR THR C . n C 3 12 ILE 12 66 66 ILE ILE C . n C 3 13 CYS 13 67 67 CYS CYS C . n C 3 14 ARG 14 68 68 ARG ARG C . n C 3 15 LYS 15 69 69 LYS LYS C . n C 3 16 ARG 16 70 70 ARG ARG C . n C 3 17 LYS 17 71 71 LYS LYS C . n C 3 18 VAL 18 72 72 VAL VAL C . n C 3 19 LYS 19 73 73 LYS LYS C . n C 3 20 CYS 20 74 74 CYS CYS C . n C 3 21 ASP 21 75 75 ASP ASP C . n C 3 22 LYS 22 76 76 LYS LYS C . n C 3 23 LEU 23 77 77 LEU LEU C . n C 3 24 ARG 24 78 78 ARG ARG C . n C 3 25 PRO 25 79 79 PRO PRO C . n C 3 26 HIS 26 80 80 HIS HIS C . n C 3 27 CYS 27 81 81 CYS CYS C . n C 3 28 GLN 28 82 82 GLN GLN C . n C 3 29 GLN 29 83 83 GLN GLN C . n C 3 30 CYS 30 84 84 CYS CYS C . n C 3 31 THR 31 85 85 THR THR C . n C 3 32 LYS 32 86 86 LYS LYS C . n C 3 33 THR 33 87 87 THR THR C . n C 3 34 GLY 34 88 88 GLY GLY C . n C 3 35 VAL 35 89 89 VAL VAL C . n C 3 36 ALA 36 90 90 ALA ALA C . n C 3 37 HIS 37 91 91 HIS HIS C . n C 3 38 LEU 38 92 92 LEU LEU C . n C 3 39 CYS 39 93 93 CYS CYS C . n C 3 40 HIS 40 94 94 HIS HIS C . n C 3 41 TYR 41 95 95 TYR TYR C . n C 3 42 MET 42 96 96 MET MET C . n C 3 43 GLU 43 97 97 GLU GLU C . n C 3 44 GLN 44 98 98 GLN GLN C . n C 3 45 THR 45 99 99 THR THR C . n C 3 46 TRP 46 100 100 TRP TRP C . n C 3 47 ALA 47 101 101 ALA ALA C . n C 3 48 GLU 48 102 102 GLU GLU C . n C 3 49 GLU 49 103 103 GLU GLU C . n C 3 50 ALA 50 104 104 ALA ALA C . n C 3 51 GLU 51 105 105 GLU GLU C . n C 3 52 LYS 52 106 106 LYS LYS C . n C 3 53 GLU 53 107 107 GLU GLU C . n C 3 54 LEU 54 108 108 LEU LEU C . n C 3 55 LEU 55 109 109 LEU LEU C . n C 3 56 LYS 56 110 110 LYS LYS C . n C 3 57 ASP 57 111 111 ASP ASP C . n C 3 58 ASN 58 112 112 ASN ASN C . n C 3 59 GLU 59 113 113 GLU GLU C . n C 3 60 LEU 60 114 114 LEU LEU C . n C 3 61 LYS 61 115 115 LYS LYS C . n C 3 62 LYS 62 116 116 LYS LYS C . n C 3 63 LEU 63 117 117 LEU LEU C . n C 3 64 ARG 64 118 118 ARG ARG C . n C 3 65 GLU 65 119 119 GLU GLU C . n C 3 66 ARG 66 120 120 ARG ARG C . n C 3 67 VAL 67 121 121 VAL VAL C . n C 3 68 LYS 68 122 122 LYS LYS C . n C 3 69 SER 69 123 123 SER SER C . n C 3 70 LEU 70 124 124 LEU LEU C . n C 3 71 GLU 71 125 125 GLU GLU C . n C 3 72 LYS 72 126 126 LYS LYS C . n C 3 73 THR 73 127 127 THR THR C . n C 3 74 LEU 74 128 128 LEU LEU C . n C 3 75 SER 75 129 129 SER SER C . n C 3 76 LYS 76 130 130 LYS LYS C . n C 3 77 VAL 77 131 ? ? ? C . n C 3 78 HIS 78 132 ? ? ? C . n C 3 79 SER 79 133 ? ? ? C . n C 3 80 SER 80 134 ? ? ? C . n C 3 81 PRO 81 135 ? ? ? C . n D 3 1 ARG 1 55 ? ? ? D . n D 3 2 LYS 2 56 56 LYS LYS D . n D 3 3 ARG 3 57 57 ARG ARG D . n D 3 4 ASN 4 58 58 ASN ASN D . n D 3 5 ARG 5 59 59 ARG ARG D . n D 3 6 ILE 6 60 60 ILE ILE D . n D 3 7 PRO 7 61 61 PRO PRO D . n D 3 8 LEU 8 62 62 LEU LEU D . n D 3 9 ARG 9 63 63 ARG ARG D . n D 3 10 CYS 10 64 64 CYS CYS D . n D 3 11 THR 11 65 65 THR THR D . n D 3 12 ILE 12 66 66 ILE ILE D . n D 3 13 CYS 13 67 67 CYS CYS D . n D 3 14 ARG 14 68 68 ARG ARG D . n D 3 15 LYS 15 69 69 LYS LYS D . n D 3 16 ARG 16 70 70 ARG ARG D . n D 3 17 LYS 17 71 71 LYS LYS D . n D 3 18 VAL 18 72 72 VAL VAL D . n D 3 19 LYS 19 73 73 LYS LYS D . n D 3 20 CYS 20 74 74 CYS CYS D . n D 3 21 ASP 21 75 75 ASP ASP D . n D 3 22 LYS 22 76 76 LYS LYS D . n D 3 23 LEU 23 77 77 LEU LEU D . n D 3 24 ARG 24 78 78 ARG ARG D . n D 3 25 PRO 25 79 79 PRO PRO D . n D 3 26 HIS 26 80 80 HIS HIS D . n D 3 27 CYS 27 81 81 CYS CYS D . n D 3 28 GLN 28 82 82 GLN GLN D . n D 3 29 GLN 29 83 83 GLN GLN D . n D 3 30 CYS 30 84 84 CYS CYS D . n D 3 31 THR 31 85 85 THR THR D . n D 3 32 LYS 32 86 86 LYS LYS D . n D 3 33 THR 33 87 87 THR THR D . n D 3 34 GLY 34 88 88 GLY GLY D . n D 3 35 VAL 35 89 89 VAL VAL D . n D 3 36 ALA 36 90 90 ALA ALA D . n D 3 37 HIS 37 91 91 HIS HIS D . n D 3 38 LEU 38 92 92 LEU LEU D . n D 3 39 CYS 39 93 93 CYS CYS D . n D 3 40 HIS 40 94 94 HIS HIS D . n D 3 41 TYR 41 95 95 TYR TYR D . n D 3 42 MET 42 96 96 MET MET D . n D 3 43 GLU 43 97 97 GLU GLU D . n D 3 44 GLN 44 98 98 GLN GLN D . n D 3 45 THR 45 99 99 THR THR D . n D 3 46 TRP 46 100 100 TRP TRP D . n D 3 47 ALA 47 101 101 ALA ALA D . n D 3 48 GLU 48 102 102 GLU GLU D . n D 3 49 GLU 49 103 103 GLU GLU D . n D 3 50 ALA 50 104 104 ALA ALA D . n D 3 51 GLU 51 105 105 GLU GLU D . n D 3 52 LYS 52 106 106 LYS LYS D . n D 3 53 GLU 53 107 107 GLU GLU D . n D 3 54 LEU 54 108 108 LEU LEU D . n D 3 55 LEU 55 109 109 LEU LEU D . n D 3 56 LYS 56 110 110 LYS LYS D . n D 3 57 ASP 57 111 111 ASP ASP D . n D 3 58 ASN 58 112 112 ASN ASN D . n D 3 59 GLU 59 113 113 GLU GLU D . n D 3 60 LEU 60 114 114 LEU LEU D . n D 3 61 LYS 61 115 115 LYS LYS D . n D 3 62 LYS 62 116 116 LYS LYS D . n D 3 63 LEU 63 117 117 LEU LEU D . n D 3 64 ARG 64 118 118 ARG ARG D . n D 3 65 GLU 65 119 119 GLU GLU D . n D 3 66 ARG 66 120 120 ARG ARG D . n D 3 67 VAL 67 121 121 VAL VAL D . n D 3 68 LYS 68 122 122 LYS LYS D . n D 3 69 SER 69 123 123 SER SER D . n D 3 70 LEU 70 124 124 LEU LEU D . n D 3 71 GLU 71 125 125 GLU GLU D . n D 3 72 LYS 72 126 126 LYS LYS D . n D 3 73 THR 73 127 127 THR THR D . n D 3 74 LEU 74 128 128 LEU LEU D . n D 3 75 SER 75 129 129 SER SER D . n D 3 76 LYS 76 130 130 LYS LYS D . n D 3 77 VAL 77 131 ? ? ? D . n D 3 78 HIS 78 132 ? ? ? D . n D 3 79 SER 79 133 ? ? ? D . n D 3 80 SER 80 134 ? ? ? D . n D 3 81 PRO 81 135 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 136 101 ZN ZN C . F 4 ZN 1 137 102 ZN ZN C . G 4 ZN 1 136 103 ZN ZN D . H 4 ZN 1 137 104 ZN ZN D . I 4 ZN 1 138 105 ZN ZN D . J 5 HOH 1 21 4 HOH HOH A . J 5 HOH 2 22 5 HOH HOH A . J 5 HOH 3 23 12 HOH HOH A . J 5 HOH 4 24 13 HOH HOH A . J 5 HOH 5 25 14 HOH HOH A . J 5 HOH 6 26 15 HOH HOH A . J 5 HOH 7 27 24 HOH HOH A . J 5 HOH 8 28 31 HOH HOH A . J 5 HOH 9 29 32 HOH HOH A . J 5 HOH 10 30 35 HOH HOH A . J 5 HOH 11 31 36 HOH HOH A . J 5 HOH 12 32 37 HOH HOH A . J 5 HOH 13 33 41 HOH HOH A . J 5 HOH 14 34 42 HOH HOH A . J 5 HOH 15 35 43 HOH HOH A . J 5 HOH 16 36 45 HOH HOH A . J 5 HOH 17 37 52 HOH HOH A . J 5 HOH 18 38 55 HOH HOH A . J 5 HOH 19 39 57 HOH HOH A . J 5 HOH 20 40 62 HOH HOH A . J 5 HOH 21 41 63 HOH HOH A . J 5 HOH 22 42 65 HOH HOH A . K 5 HOH 1 21 19 HOH HOH B . K 5 HOH 2 22 22 HOH HOH B . K 5 HOH 3 23 27 HOH HOH B . K 5 HOH 4 24 38 HOH HOH B . K 5 HOH 5 25 40 HOH HOH B . K 5 HOH 6 26 50 HOH HOH B . K 5 HOH 7 27 58 HOH HOH B . K 5 HOH 8 28 59 HOH HOH B . K 5 HOH 9 29 64 HOH HOH B . K 5 HOH 10 30 70 HOH HOH B . K 5 HOH 11 31 74 HOH HOH B . L 5 HOH 1 138 2 HOH HOH C . L 5 HOH 2 139 3 HOH HOH C . L 5 HOH 3 140 7 HOH HOH C . L 5 HOH 4 141 8 HOH HOH C . L 5 HOH 5 142 9 HOH HOH C . L 5 HOH 6 143 11 HOH HOH C . L 5 HOH 7 144 16 HOH HOH C . L 5 HOH 8 145 17 HOH HOH C . L 5 HOH 9 146 20 HOH HOH C . L 5 HOH 10 147 21 HOH HOH C . L 5 HOH 11 148 25 HOH HOH C . L 5 HOH 12 149 28 HOH HOH C . L 5 HOH 13 150 29 HOH HOH C . L 5 HOH 14 151 33 HOH HOH C . L 5 HOH 15 152 34 HOH HOH C . L 5 HOH 16 153 46 HOH HOH C . L 5 HOH 17 154 47 HOH HOH C . L 5 HOH 18 155 48 HOH HOH C . L 5 HOH 19 156 49 HOH HOH C . L 5 HOH 20 157 56 HOH HOH C . L 5 HOH 21 158 60 HOH HOH C . L 5 HOH 22 159 61 HOH HOH C . L 5 HOH 23 160 66 HOH HOH C . L 5 HOH 24 161 73 HOH HOH C . L 5 HOH 25 162 75 HOH HOH C . M 5 HOH 1 139 6 HOH HOH D . M 5 HOH 2 140 10 HOH HOH D . M 5 HOH 3 141 18 HOH HOH D . M 5 HOH 4 142 23 HOH HOH D . M 5 HOH 5 143 26 HOH HOH D . M 5 HOH 6 144 30 HOH HOH D . M 5 HOH 7 145 39 HOH HOH D . M 5 HOH 8 146 44 HOH HOH D . M 5 HOH 9 147 51 HOH HOH D . M 5 HOH 10 148 53 HOH HOH D . M 5 HOH 11 149 54 HOH HOH D . M 5 HOH 12 150 67 HOH HOH D . M 5 HOH 13 151 68 HOH HOH D . M 5 HOH 14 152 69 HOH HOH D . M 5 HOH 15 153 71 HOH HOH D . M 5 HOH 16 154 72 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D LYS 56 ? CG ? D LYS 2 CG 2 1 Y 1 D LYS 56 ? CD ? D LYS 2 CD 3 1 Y 1 D LYS 56 ? CE ? D LYS 2 CE 4 1 Y 1 D LYS 56 ? NZ ? D LYS 2 NZ 5 1 Y 1 D LEU 114 ? CD1 ? D LEU 60 CD1 6 1 Y 1 D LEU 114 ? CD2 ? D LEU 60 CD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASES phasing . ? 1 CCP4 'model building' SUITES ? 2 X-PLOR refinement 3.851 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 CCP4 phasing . ? 6 # _cell.entry_id 2HAP _cell.length_a 92.500 _cell.length_b 92.500 _cell.length_c 86.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HAP _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 92 # _exptl.entry_id 2HAP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.9 _exptl_crystal.density_percent_sol 57.33 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;0.3 MM PROTEIN, 0.4 MM DNA DUPLEX, 5% PEG 2000, 100 MM KCL, 5 MM MGCL2, 0.1 MM CO(NH3)6CL3, 25 MM MES (PH 5.6), VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 KCL ? ? ? 1 2 1 MGCL2 ? ? ? 1 3 1 '[CO(NH3)6]CL3' ? ? ? 1 4 1 MES ? ? ? 1 5 1 'PEG 2000' ? ? ? 1 6 2 'PEG 2000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 133 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1997-06-15 _diffrn_detector.details 'YALE MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'YALE MIRRORS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2HAP _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 16925 _reflns.number_all ? _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0810000 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.8 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.7 _reflns_shell.percent_possible_all 62 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.1140000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2HAP _refine.ls_number_reflns_obs 12390 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF 1000000 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.5 _refine.ls_percent_reflns_obs 91.9 _refine.ls_R_factor_obs 0.2480000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2480000 _refine.ls_R_factor_R_free 0.3020000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1254 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 27.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1255 _refine_hist.pdbx_number_atoms_nucleic_acid 814 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 2148 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.070 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.8 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.35 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.20 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 1.85 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 2.69 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.5 _refine_ls_shell.d_res_low 2.61 _refine_ls_shell.number_reflns_R_work 1282 _refine_ls_shell.R_factor_R_work 0.3270000 _refine_ls_shell.percent_reflns_obs 95.2 _refine_ls_shell.R_factor_R_free 0.3360000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 PARAM.ZNC TOP19.SOL 'X-RAY DIFFRACTION' 4 ? TOPH.ZNC 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2HAP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2HAP _struct.title ;STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HAP _struct_keywords.pdbx_keywords 'GENE REGULATION/DNA' _struct_keywords.text 'COMPLEX TRANSCRIPTION FACTOR-DNA, ASYMMETRY, TRANSCRIPTIONAL ACTIVATION, HYPERACTIVE MUTANT, GENE REGULATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP CYP1_YEAST P12351 3 55 ? ? 2 PDB 2HAP 2HAP 1 ? ? ? 3 PDB 2HAP 2HAP 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HAP C 1 ? 81 ? P12351 55 ? 135 ? 55 135 2 1 2HAP D 1 ? 81 ? P12351 55 ? 135 ? 55 135 3 2 2HAP A 1 ? 20 ? 2HAP 1 ? 20 ? 1 20 4 3 2HAP B 1 ? 20 ? 2HAP 1 ? 20 ? 1 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 11 ? LYS C 15 ? THR C 65 LYS C 69 1 ? 5 HELX_P HELX_P2 2 GLN C 28 ? THR C 33 ? GLN C 82 THR C 87 1 ? 6 HELX_P HELX_P3 3 ALA C 36 ? LEU C 38 ? ALA C 90 LEU C 92 5 ? 3 HELX_P HELX_P4 4 TRP C 46 ? THR C 73 ? TRP C 100 THR C 127 1 ? 28 HELX_P HELX_P5 5 ILE D 12 ? LYS D 15 ? ILE D 66 LYS D 69 1 ? 4 HELX_P HELX_P6 6 GLN D 28 ? THR D 33 ? GLN D 82 THR D 87 1 ? 6 HELX_P HELX_P7 7 ALA D 36 ? LEU D 38 ? ALA D 90 LEU D 92 5 ? 3 HELX_P HELX_P8 8 THR D 45 ? THR D 73 ? THR D 99 THR D 127 5 ? 29 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CYS 10 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 64 C ZN 136 1_555 ? ? ? ? ? ? ? 2.431 ? ? metalc2 metalc ? ? C CYS 10 SG ? ? ? 1_555 F ZN . ZN ? ? C CYS 64 C ZN 137 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc3 metalc ? ? C CYS 13 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 67 C ZN 136 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc4 metalc ? ? C CYS 20 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 74 C ZN 136 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc5 metalc ? ? C CYS 27 SG ? ? ? 1_555 E ZN . ZN ? ? C CYS 81 C ZN 136 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc6 metalc ? ? C CYS 27 SG ? ? ? 1_555 F ZN . ZN ? ? C CYS 81 C ZN 137 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc7 metalc ? ? C CYS 30 SG ? ? ? 1_555 F ZN . ZN ? ? C CYS 84 C ZN 137 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc8 metalc ? ? C CYS 39 SG ? ? ? 1_555 F ZN . ZN ? ? C CYS 93 C ZN 137 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc9 metalc ? ? D CYS 10 SG ? ? ? 1_555 H ZN . ZN ? ? D CYS 64 D ZN 137 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc10 metalc ? ? D CYS 10 SG ? ? ? 1_555 I ZN . ZN ? ? D CYS 64 D ZN 138 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc11 metalc ? ? D CYS 13 SG ? ? ? 1_555 H ZN . ZN ? ? D CYS 67 D ZN 137 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc12 metalc ? ? D CYS 20 SG ? ? ? 1_555 H ZN . ZN ? ? D CYS 74 D ZN 137 1_555 ? ? ? ? ? ? ? 2.371 ? ? metalc13 metalc ? ? D HIS 26 NE2 ? ? ? 1_555 G ZN . ZN ? ? D HIS 80 D ZN 136 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc14 metalc ? ? D HIS 26 NE2 ? ? ? 7_556 G ZN . ZN ? ? D HIS 80 D ZN 136 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc15 metalc ? ? D CYS 27 SG ? ? ? 1_555 H ZN . ZN ? ? D CYS 81 D ZN 137 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc16 metalc ? ? D CYS 27 SG ? ? ? 1_555 I ZN . ZN ? ? D CYS 81 D ZN 138 1_555 ? ? ? ? ? ? ? 2.443 ? ? metalc17 metalc ? ? D CYS 30 SG ? ? ? 1_555 I ZN . ZN ? ? D CYS 84 D ZN 138 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc18 metalc ? ? D HIS 37 ND1 ? ? ? 1_555 G ZN . ZN ? ? D HIS 91 D ZN 136 1_555 ? ? ? ? ? ? ? 1.879 ? ? metalc19 metalc ? ? D HIS 37 ND1 ? ? ? 7_556 G ZN . ZN ? ? D HIS 91 D ZN 136 1_555 ? ? ? ? ? ? ? 1.878 ? ? metalc20 metalc ? ? D CYS 39 SG ? ? ? 1_555 I ZN . ZN ? ? D CYS 93 D ZN 138 1_555 ? ? ? ? ? ? ? 2.303 ? ? hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 20 N3 ? ? A DA 1 B DT 20 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog2 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 19 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 19 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 19 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 18 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 18 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 18 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 17 N2 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog9 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 16 N1 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 16 N6 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 15 N3 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 15 O4 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 14 N1 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 14 N6 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 13 N1 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 13 N6 ? ? A DT 8 B DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 9 B DT 12 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog18 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 11 N1 ? ? A DT 10 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 11 N6 ? ? A DT 10 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 11 B DG 10 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog21 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 12 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 12 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 12 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 13 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 13 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 13 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 14 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 14 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 15 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 15 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 16 B DA 5 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog32 hydrog ? ? A DT 17 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 17 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 17 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 17 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 18 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 18 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 19 B DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog37 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 1 N1 ? ? A DT 20 B DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 1 N6 ? ? A DT 20 B DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 13 ? C CYS 67 ? 1_555 101.7 ? 2 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 20 ? C CYS 74 ? 1_555 108.6 ? 3 SG ? C CYS 13 ? C CYS 67 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 20 ? C CYS 74 ? 1_555 115.7 ? 4 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 27 ? C CYS 81 ? 1_555 100.7 ? 5 SG ? C CYS 13 ? C CYS 67 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 27 ? C CYS 81 ? 1_555 121.0 ? 6 SG ? C CYS 20 ? C CYS 74 ? 1_555 ZN ? E ZN . ? C ZN 136 ? 1_555 SG ? C CYS 27 ? C CYS 81 ? 1_555 107.3 ? 7 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 27 ? C CYS 81 ? 1_555 103.3 ? 8 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 30 ? C CYS 84 ? 1_555 111.1 ? 9 SG ? C CYS 27 ? C CYS 81 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 30 ? C CYS 84 ? 1_555 102.4 ? 10 SG ? C CYS 10 ? C CYS 64 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 39 ? C CYS 93 ? 1_555 113.2 ? 11 SG ? C CYS 27 ? C CYS 81 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 39 ? C CYS 93 ? 1_555 110.6 ? 12 SG ? C CYS 30 ? C CYS 84 ? 1_555 ZN ? F ZN . ? C ZN 137 ? 1_555 SG ? C CYS 39 ? C CYS 93 ? 1_555 115.0 ? 13 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 13 ? D CYS 67 ? 1_555 98.3 ? 14 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 20 ? D CYS 74 ? 1_555 111.9 ? 15 SG ? D CYS 13 ? D CYS 67 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 20 ? D CYS 74 ? 1_555 102.4 ? 16 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 27 ? D CYS 81 ? 1_555 103.1 ? 17 SG ? D CYS 13 ? D CYS 67 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 27 ? D CYS 81 ? 1_555 124.5 ? 18 SG ? D CYS 20 ? D CYS 74 ? 1_555 ZN ? H ZN . ? D ZN 137 ? 1_555 SG ? D CYS 27 ? D CYS 81 ? 1_555 115.3 ? 19 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 27 ? D CYS 81 ? 1_555 103.2 ? 20 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 30 ? D CYS 84 ? 1_555 112.2 ? 21 SG ? D CYS 27 ? D CYS 81 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 30 ? D CYS 84 ? 1_555 100.8 ? 22 SG ? D CYS 10 ? D CYS 64 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 39 ? D CYS 93 ? 1_555 112.7 ? 23 SG ? D CYS 27 ? D CYS 81 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 39 ? D CYS 93 ? 1_555 110.4 ? 24 SG ? D CYS 30 ? D CYS 84 ? 1_555 ZN ? I ZN . ? D ZN 138 ? 1_555 SG ? D CYS 39 ? D CYS 93 ? 1_555 116.1 ? 25 NE2 ? D HIS 26 ? D HIS 80 ? 1_555 ZN ? G ZN . ? D ZN 136 ? 1_555 NE2 ? D HIS 26 ? D HIS 80 ? 7_556 123.9 ? 26 NE2 ? D HIS 26 ? D HIS 80 ? 1_555 ZN ? G ZN . ? D ZN 136 ? 1_555 ND1 ? D HIS 37 ? D HIS 91 ? 1_555 97.9 ? 27 NE2 ? D HIS 26 ? D HIS 80 ? 7_556 ZN ? G ZN . ? D ZN 136 ? 1_555 ND1 ? D HIS 37 ? D HIS 91 ? 1_555 114.8 ? 28 NE2 ? D HIS 26 ? D HIS 80 ? 1_555 ZN ? G ZN . ? D ZN 136 ? 1_555 ND1 ? D HIS 37 ? D HIS 91 ? 7_556 114.8 ? 29 NE2 ? D HIS 26 ? D HIS 80 ? 7_556 ZN ? G ZN . ? D ZN 136 ? 1_555 ND1 ? D HIS 37 ? D HIS 91 ? 7_556 97.9 ? 30 ND1 ? D HIS 37 ? D HIS 91 ? 1_555 ZN ? G ZN . ? D ZN 136 ? 1_555 ND1 ? D HIS 37 ? D HIS 91 ? 7_556 107.5 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 24 C . ? ARG 78 C PRO 25 C ? PRO 79 C 1 0.62 2 ARG 24 D . ? ARG 78 D PRO 25 D ? PRO 79 D 1 1.04 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details ZNA Unknown ? ? ? ? 8 ? ZNB Unknown ? ? ? ? 8 ? AC1 Software C ZN 136 ? 5 'BINDING SITE FOR RESIDUE ZN C 136' AC2 Software C ZN 137 ? 5 'BINDING SITE FOR RESIDUE ZN C 137' AC3 Software D ZN 136 ? 4 'BINDING SITE FOR RESIDUE ZN D 136' AC4 Software D ZN 137 ? 5 'BINDING SITE FOR RESIDUE ZN D 137' AC5 Software D ZN 138 ? 5 'BINDING SITE FOR RESIDUE ZN D 138' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 ZNA 8 ZN E . ? ZN C 136 . ? 1_555 ? 2 ZNA 8 ZN F . ? ZN C 137 . ? 1_555 ? 3 ZNA 8 CYS C 10 ? CYS C 64 . ? 1_555 ? 4 ZNA 8 CYS C 13 ? CYS C 67 . ? 1_555 ? 5 ZNA 8 CYS C 20 ? CYS C 74 . ? 1_555 ? 6 ZNA 8 CYS C 27 ? CYS C 81 . ? 1_555 ? 7 ZNA 8 CYS C 30 ? CYS C 84 . ? 1_555 ? 8 ZNA 8 CYS C 39 ? CYS C 93 . ? 1_555 ? 9 ZNB 8 ZN H . ? ZN D 137 . ? 1_555 ? 10 ZNB 8 ZN I . ? ZN D 138 . ? 1_555 ? 11 ZNB 8 CYS D 10 ? CYS D 64 . ? 1_555 ? 12 ZNB 8 CYS D 13 ? CYS D 67 . ? 1_555 ? 13 ZNB 8 CYS D 20 ? CYS D 74 . ? 1_555 ? 14 ZNB 8 CYS D 27 ? CYS D 81 . ? 1_555 ? 15 ZNB 8 CYS D 30 ? CYS D 84 . ? 1_555 ? 16 ZNB 8 CYS D 39 ? CYS D 93 . ? 1_555 ? 17 AC1 5 CYS C 10 ? CYS C 64 . ? 1_555 ? 18 AC1 5 CYS C 13 ? CYS C 67 . ? 1_555 ? 19 AC1 5 CYS C 20 ? CYS C 74 . ? 1_555 ? 20 AC1 5 CYS C 27 ? CYS C 81 . ? 1_555 ? 21 AC1 5 ZN F . ? ZN C 137 . ? 1_555 ? 22 AC2 5 CYS C 10 ? CYS C 64 . ? 1_555 ? 23 AC2 5 CYS C 27 ? CYS C 81 . ? 1_555 ? 24 AC2 5 CYS C 30 ? CYS C 84 . ? 1_555 ? 25 AC2 5 CYS C 39 ? CYS C 93 . ? 1_555 ? 26 AC2 5 ZN E . ? ZN C 136 . ? 1_555 ? 27 AC3 4 HIS D 26 ? HIS D 80 . ? 7_556 ? 28 AC3 4 HIS D 26 ? HIS D 80 . ? 1_555 ? 29 AC3 4 HIS D 37 ? HIS D 91 . ? 1_555 ? 30 AC3 4 HIS D 37 ? HIS D 91 . ? 7_556 ? 31 AC4 5 CYS D 10 ? CYS D 64 . ? 1_555 ? 32 AC4 5 CYS D 13 ? CYS D 67 . ? 1_555 ? 33 AC4 5 CYS D 20 ? CYS D 74 . ? 1_555 ? 34 AC4 5 CYS D 27 ? CYS D 81 . ? 1_555 ? 35 AC4 5 ZN I . ? ZN D 138 . ? 1_555 ? 36 AC5 5 CYS D 10 ? CYS D 64 . ? 1_555 ? 37 AC5 5 CYS D 27 ? CYS D 81 . ? 1_555 ? 38 AC5 5 CYS D 30 ? CYS D 84 . ? 1_555 ? 39 AC5 5 CYS D 39 ? CYS D 93 . ? 1_555 ? 40 AC5 5 ZN H . ? ZN D 137 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL C 72 ? ? -120.48 -168.88 2 1 LYS C 76 ? ? 39.48 28.53 3 1 VAL C 89 ? ? -99.89 50.20 4 1 CYS D 67 ? ? -78.96 27.74 5 1 VAL D 72 ? ? -109.71 -169.07 6 1 LYS D 76 ? ? -63.80 41.88 7 1 THR D 87 ? ? -94.95 30.67 8 1 LEU D 128 ? ? -48.39 -12.30 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 19 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.057 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id D _pdbx_struct_special_symmetry.auth_comp_id ZN _pdbx_struct_special_symmetry.auth_seq_id 136 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id ZN _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C VAL 131 ? C VAL 77 2 1 Y 1 C HIS 132 ? C HIS 78 3 1 Y 1 C SER 133 ? C SER 79 4 1 Y 1 C SER 134 ? C SER 80 5 1 Y 1 C PRO 135 ? C PRO 81 6 1 Y 1 D ARG 55 ? D ARG 1 7 1 Y 1 D VAL 131 ? D VAL 77 8 1 Y 1 D HIS 132 ? D HIS 78 9 1 Y 1 D SER 133 ? D SER 79 10 1 Y 1 D SER 134 ? D SER 80 11 1 Y 1 D PRO 135 ? D PRO 81 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PRO N N N N 393 PRO CA C N S 394 PRO C C N N 395 PRO O O N N 396 PRO CB C N N 397 PRO CG C N N 398 PRO CD C N N 399 PRO OXT O N N 400 PRO H H N N 401 PRO HA H N N 402 PRO HB2 H N N 403 PRO HB3 H N N 404 PRO HG2 H N N 405 PRO HG3 H N N 406 PRO HD2 H N N 407 PRO HD3 H N N 408 PRO HXT H N N 409 SER N N N N 410 SER CA C N S 411 SER C C N N 412 SER O O N N 413 SER CB C N N 414 SER OG O N N 415 SER OXT O N N 416 SER H H N N 417 SER H2 H N N 418 SER HA H N N 419 SER HB2 H N N 420 SER HB3 H N N 421 SER HG H N N 422 SER HXT H N N 423 THR N N N N 424 THR CA C N S 425 THR C C N N 426 THR O O N N 427 THR CB C N R 428 THR OG1 O N N 429 THR CG2 C N N 430 THR OXT O N N 431 THR H H N N 432 THR H2 H N N 433 THR HA H N N 434 THR HB H N N 435 THR HG1 H N N 436 THR HG21 H N N 437 THR HG22 H N N 438 THR HG23 H N N 439 THR HXT H N N 440 TRP N N N N 441 TRP CA C N S 442 TRP C C N N 443 TRP O O N N 444 TRP CB C N N 445 TRP CG C Y N 446 TRP CD1 C Y N 447 TRP CD2 C Y N 448 TRP NE1 N Y N 449 TRP CE2 C Y N 450 TRP CE3 C Y N 451 TRP CZ2 C Y N 452 TRP CZ3 C Y N 453 TRP CH2 C Y N 454 TRP OXT O N N 455 TRP H H N N 456 TRP H2 H N N 457 TRP HA H N N 458 TRP HB2 H N N 459 TRP HB3 H N N 460 TRP HD1 H N N 461 TRP HE1 H N N 462 TRP HE3 H N N 463 TRP HZ2 H N N 464 TRP HZ3 H N N 465 TRP HH2 H N N 466 TRP HXT H N N 467 TYR N N N N 468 TYR CA C N S 469 TYR C C N N 470 TYR O O N N 471 TYR CB C N N 472 TYR CG C Y N 473 TYR CD1 C Y N 474 TYR CD2 C Y N 475 TYR CE1 C Y N 476 TYR CE2 C Y N 477 TYR CZ C Y N 478 TYR OH O N N 479 TYR OXT O N N 480 TYR H H N N 481 TYR H2 H N N 482 TYR HA H N N 483 TYR HB2 H N N 484 TYR HB3 H N N 485 TYR HD1 H N N 486 TYR HD2 H N N 487 TYR HE1 H N N 488 TYR HE2 H N N 489 TYR HH H N N 490 TYR HXT H N N 491 VAL N N N N 492 VAL CA C N S 493 VAL C C N N 494 VAL O O N N 495 VAL CB C N N 496 VAL CG1 C N N 497 VAL CG2 C N N 498 VAL OXT O N N 499 VAL H H N N 500 VAL H2 H N N 501 VAL HA H N N 502 VAL HB H N N 503 VAL HG11 H N N 504 VAL HG12 H N N 505 VAL HG13 H N N 506 VAL HG21 H N N 507 VAL HG22 H N N 508 VAL HG23 H N N 509 VAL HXT H N N 510 ZN ZN ZN N N 511 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PRO N CA sing N N 386 PRO N CD sing N N 387 PRO N H sing N N 388 PRO CA C sing N N 389 PRO CA CB sing N N 390 PRO CA HA sing N N 391 PRO C O doub N N 392 PRO C OXT sing N N 393 PRO CB CG sing N N 394 PRO CB HB2 sing N N 395 PRO CB HB3 sing N N 396 PRO CG CD sing N N 397 PRO CG HG2 sing N N 398 PRO CG HG3 sing N N 399 PRO CD HD2 sing N N 400 PRO CD HD3 sing N N 401 PRO OXT HXT sing N N 402 SER N CA sing N N 403 SER N H sing N N 404 SER N H2 sing N N 405 SER CA C sing N N 406 SER CA CB sing N N 407 SER CA HA sing N N 408 SER C O doub N N 409 SER C OXT sing N N 410 SER CB OG sing N N 411 SER CB HB2 sing N N 412 SER CB HB3 sing N N 413 SER OG HG sing N N 414 SER OXT HXT sing N N 415 THR N CA sing N N 416 THR N H sing N N 417 THR N H2 sing N N 418 THR CA C sing N N 419 THR CA CB sing N N 420 THR CA HA sing N N 421 THR C O doub N N 422 THR C OXT sing N N 423 THR CB OG1 sing N N 424 THR CB CG2 sing N N 425 THR CB HB sing N N 426 THR OG1 HG1 sing N N 427 THR CG2 HG21 sing N N 428 THR CG2 HG22 sing N N 429 THR CG2 HG23 sing N N 430 THR OXT HXT sing N N 431 TRP N CA sing N N 432 TRP N H sing N N 433 TRP N H2 sing N N 434 TRP CA C sing N N 435 TRP CA CB sing N N 436 TRP CA HA sing N N 437 TRP C O doub N N 438 TRP C OXT sing N N 439 TRP CB CG sing N N 440 TRP CB HB2 sing N N 441 TRP CB HB3 sing N N 442 TRP CG CD1 doub Y N 443 TRP CG CD2 sing Y N 444 TRP CD1 NE1 sing Y N 445 TRP CD1 HD1 sing N N 446 TRP CD2 CE2 doub Y N 447 TRP CD2 CE3 sing Y N 448 TRP NE1 CE2 sing Y N 449 TRP NE1 HE1 sing N N 450 TRP CE2 CZ2 sing Y N 451 TRP CE3 CZ3 doub Y N 452 TRP CE3 HE3 sing N N 453 TRP CZ2 CH2 doub Y N 454 TRP CZ2 HZ2 sing N N 455 TRP CZ3 CH2 sing Y N 456 TRP CZ3 HZ3 sing N N 457 TRP CH2 HH2 sing N N 458 TRP OXT HXT sing N N 459 TYR N CA sing N N 460 TYR N H sing N N 461 TYR N H2 sing N N 462 TYR CA C sing N N 463 TYR CA CB sing N N 464 TYR CA HA sing N N 465 TYR C O doub N N 466 TYR C OXT sing N N 467 TYR CB CG sing N N 468 TYR CB HB2 sing N N 469 TYR CB HB3 sing N N 470 TYR CG CD1 doub Y N 471 TYR CG CD2 sing Y N 472 TYR CD1 CE1 sing Y N 473 TYR CD1 HD1 sing N N 474 TYR CD2 CE2 doub Y N 475 TYR CD2 HD2 sing N N 476 TYR CE1 CZ doub Y N 477 TYR CE1 HE1 sing N N 478 TYR CE2 CZ sing Y N 479 TYR CE2 HE2 sing N N 480 TYR CZ OH sing N N 481 TYR OH HH sing N N 482 TYR OXT HXT sing N N 483 VAL N CA sing N N 484 VAL N H sing N N 485 VAL N H2 sing N N 486 VAL CA C sing N N 487 VAL CA CB sing N N 488 VAL CA HA sing N N 489 VAL C O doub N N 490 VAL C OXT sing N N 491 VAL CB CG1 sing N N 492 VAL CB CG2 sing N N 493 VAL CB HB sing N N 494 VAL CG1 HG11 sing N N 495 VAL CG1 HG12 sing N N 496 VAL CG1 HG13 sing N N 497 VAL CG2 HG21 sing N N 498 VAL CG2 HG22 sing N N 499 VAL CG2 HG23 sing N N 500 VAL OXT HXT sing N N 501 # _ndb_struct_conf_na.entry_id 2HAP _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 20 1_555 1.624 0.187 -0.709 -27.188 -3.150 33.007 1 A_DA1:DT20_B A 1 ? B 20 ? ? ? 1 A DC 2 1_555 B DG 19 1_555 0.290 -0.227 -0.348 -12.233 -1.585 7.268 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DG 3 1_555 B DC 18 1_555 0.352 -0.103 -0.058 -1.729 -9.085 -4.746 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DC 4 1_555 B DG 17 1_555 -0.285 0.425 -0.062 -2.550 -3.359 10.810 4 A_DC4:DG17_B A 4 ? B 17 ? ? 1 1 A DT 5 1_555 B DA 16 1_555 -0.276 0.122 0.137 16.749 -4.732 7.423 5 A_DT5:DA16_B A 5 ? B 16 ? 20 1 1 A DA 6 1_555 B DT 15 1_555 0.441 -0.110 0.262 -0.910 -20.221 -2.003 6 A_DA6:DT15_B A 6 ? B 15 ? 20 1 1 A DT 7 1_555 B DA 14 1_555 -0.712 -0.053 0.277 -3.970 -6.837 -1.373 7 A_DT7:DA14_B A 7 ? B 14 ? 20 1 1 A DT 8 1_555 B DA 13 1_555 0.075 -0.300 -0.261 -2.348 -15.606 4.266 8 A_DT8:DA13_B A 8 ? B 13 ? 20 1 1 A DA 9 1_555 B DT 12 1_555 -0.428 0.216 0.086 -3.570 -13.793 12.422 9 A_DA9:DT12_B A 9 ? B 12 ? ? 1 1 A DT 10 1_555 B DA 11 1_555 -0.220 0.146 0.580 -4.990 -19.673 -0.110 10 A_DT10:DA11_B A 10 ? B 11 ? 20 1 1 A DC 11 1_555 B DG 10 1_555 0.246 0.402 0.237 1.014 0.511 15.360 11 A_DC11:DG10_B A 11 ? B 10 ? ? 1 1 A DG 12 1_555 B DC 9 1_555 0.336 -0.229 0.596 3.699 -17.962 -5.674 12 A_DG12:DC9_B A 12 ? B 9 ? 19 1 1 A DC 13 1_555 B DG 8 1_555 -0.466 0.175 -0.165 -2.718 -7.361 5.714 13 A_DC13:DG8_B A 13 ? B 8 ? 19 1 1 A DT 14 1_555 B DA 7 1_555 -0.228 0.169 -0.012 6.149 -4.594 -4.513 14 A_DT14:DA7_B A 14 ? B 7 ? 20 1 1 A DA 15 1_555 B DT 6 1_555 0.416 0.031 -0.087 5.860 -17.910 2.223 15 A_DA15:DT6_B A 15 ? B 6 ? 20 1 1 A DT 16 1_555 B DA 5 1_555 0.659 0.254 0.452 -9.649 -15.989 6.488 16 A_DT16:DA5_B A 16 ? B 5 ? ? ? 1 A DT 17 1_555 B DA 4 1_555 -1.027 0.031 0.324 -10.246 -23.266 4.247 17 A_DT17:DA4_B A 17 ? B 4 ? 20 1 1 A DA 18 1_555 B DT 3 1_555 -0.169 -0.098 0.211 -0.268 -7.675 7.343 18 A_DA18:DT3_B A 18 ? B 3 ? 20 1 1 A DG 19 1_555 B DC 2 1_555 -0.601 0.232 0.245 -5.910 -11.725 8.315 19 A_DG19:DC2_B A 19 ? B 2 ? ? 1 1 A DT 20 1_555 B DA 1 1_555 0.101 -0.062 0.396 -7.349 -15.316 -4.945 20 A_DT20:DA1_B A 20 ? B 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 20 1_555 A DC 2 1_555 B DG 19 1_555 -1.592 0.628 2.951 -1.285 13.229 21.925 -2.230 3.240 2.933 31.348 3.045 25.597 1 AA_DA1DC2:DG19DT20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 19 1_555 A DG 3 1_555 B DC 18 1_555 -1.665 1.876 3.286 -7.161 2.336 35.743 2.648 1.596 3.651 3.755 11.510 36.503 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 18 1_555 A DC 4 1_555 B DG 17 1_555 1.698 -0.058 3.237 4.192 0.874 30.850 -0.278 -2.345 3.429 1.632 -7.833 31.139 3 AA_DG3DC4:DG17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DC 4 1_555 B DG 17 1_555 A DT 5 1_555 B DA 16 1_555 -0.295 0.443 3.223 0.336 -3.699 31.767 1.458 0.594 3.150 -6.730 -0.611 31.978 4 AA_DC4DT5:DA16DG17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DT 5 1_555 B DA 16 1_555 A DA 6 1_555 B DT 15 1_555 -0.167 0.223 3.792 2.785 -4.160 49.325 0.621 0.437 3.749 -4.970 -3.327 49.563 5 AA_DT5DA6:DT15DA16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DA 6 1_555 B DT 15 1_555 A DT 7 1_555 B DA 14 1_555 0.503 -0.251 3.375 0.498 -6.887 30.192 0.918 -0.842 3.356 -13.009 -0.941 30.953 6 AA_DA6DT7:DA14DT15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DT 7 1_555 B DA 14 1_555 A DT 8 1_555 B DA 13 1_555 -0.375 -0.268 3.201 3.651 -0.084 35.270 -0.428 1.137 3.149 -0.138 -6.005 35.453 7 AA_DT7DT8:DA13DA14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DT 8 1_555 B DA 13 1_555 A DA 9 1_555 B DT 12 1_555 0.475 1.519 3.361 -2.097 -0.336 42.794 2.114 -0.863 3.324 -0.460 2.872 42.844 8 AA_DT8DA9:DT12DA13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DA 9 1_555 B DT 12 1_555 A DT 10 1_555 B DA 11 1_555 -1.751 0.807 3.511 -6.987 -2.305 37.086 1.577 1.700 3.714 -3.581 10.855 37.783 9 AA_DA9DT10:DA11DT12_BB A 9 ? B 12 ? A 10 ? B 11 ? 1 A DT 10 1_555 B DA 11 1_555 A DC 11 1_555 B DG 10 1_555 1.613 1.990 3.411 5.404 2.997 38.184 2.601 -1.706 3.736 4.544 -8.195 38.662 10 AA_DT10DC11:DG10DA11_BB A 10 ? B 11 ? A 11 ? B 10 ? 1 A DC 11 1_555 B DG 10 1_555 A DG 12 1_555 B DC 9 1_555 -1.707 1.604 3.360 -5.326 2.136 37.898 2.156 1.883 3.639 3.266 8.144 38.314 11 AA_DC11DG12:DC9DG10_BB A 11 ? B 10 ? A 12 ? B 9 ? 1 A DG 12 1_555 B DC 9 1_555 A DC 13 1_555 B DG 8 1_555 1.576 0.165 3.394 8.118 -4.681 33.643 1.050 -1.285 3.611 -7.898 -13.699 34.887 12 AA_DG12DC13:DG8DC9_BB A 12 ? B 9 ? A 13 ? B 8 ? 1 A DC 13 1_555 B DG 8 1_555 A DT 14 1_555 B DA 7 1_555 -1.027 -0.317 3.254 -3.208 5.140 31.476 -1.503 1.282 3.249 9.367 5.845 32.039 13 AA_DC13DT14:DA7DG8_BB A 13 ? B 8 ? A 14 ? B 7 ? 1 A DT 14 1_555 B DA 7 1_555 A DA 15 1_555 B DT 6 1_555 0.660 -0.706 3.208 4.233 6.692 34.113 -2.156 -0.477 3.076 11.220 -7.098 34.993 14 AA_DT14DA15:DT6DA7_BB A 14 ? B 7 ? A 15 ? B 6 ? 1 A DA 15 1_555 B DT 6 1_555 A DT 16 1_555 B DA 5 1_555 -0.428 -0.688 3.655 -4.304 6.996 36.584 -2.086 0.041 3.496 10.976 6.751 37.464 15 AA_DA15DT16:DA5DT6_BB A 15 ? B 6 ? A 16 ? B 5 ? 1 A DT 16 1_555 B DA 5 1_555 A DT 17 1_555 B DA 4 1_555 -0.564 -0.613 3.101 2.882 -2.877 28.022 -0.622 1.786 3.075 -5.902 -5.912 28.310 16 AA_DT16DT17:DA4DA5_BB A 16 ? B 5 ? A 17 ? B 4 ? 1 A DT 17 1_555 B DA 4 1_555 A DA 18 1_555 B DT 3 1_555 1.225 1.092 3.085 2.682 -2.992 43.217 1.750 -1.411 3.073 -4.051 -3.631 43.394 17 AA_DT17DA18:DT3DA4_BB A 17 ? B 4 ? A 18 ? B 3 ? 1 A DA 18 1_555 B DT 3 1_555 A DG 19 1_555 B DC 2 1_555 -1.388 0.297 3.395 -6.730 11.107 35.786 -1.090 1.195 3.526 17.385 10.534 37.996 18 AA_DA18DG19:DC2DT3_BB A 18 ? B 3 ? A 19 ? B 2 ? 1 A DG 19 1_555 B DC 2 1_555 A DT 20 1_555 B DA 1 1_555 -0.612 0.175 3.393 -2.763 5.610 32.876 -0.669 0.584 3.414 9.802 4.827 33.449 19 AA_DG19DT20:DA1DC2_BB A 19 ? B 2 ? A 20 ? B 1 ? # _atom_sites.entry_id 2HAP _atom_sites.fract_transf_matrix[1][1] 0.010811 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010811 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011561 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_