data_2HAX # _entry.id 2HAX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2HAX NDB PD0821 RCSB RCSB038146 WWPDB D_1000038146 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1C9O 'Bacillus caldolyticus cold shock protein' unspecified PDB 1CSP 'Bacillus subtilis cold shock protein B' unspecified PDB 1MJC 'Escherichia coli cold shock protein A' unspecified PDB 2ES2 'Bacillus subtilis cold shock protein B in complex with hexathymidine' unspecified # _pdbx_database_status.entry_id 2HAX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-13 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Max, K.E.A.' 1 'Heinemann, U.' 2 # _citation.id primary _citation.title ;Common mode of DNA binding to cold shock domains. Crystal structure of hexathymidine bound to the domain-swapped form of a major cold shock protein from Bacillus caldolyticus. ; _citation.journal_abbrev 'Febs J.' _citation.journal_volume 274 _citation.page_first 1265 _citation.page_last 1279 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17266726 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2007.05672.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Max, K.E.' 1 primary 'Zeeb, M.' 2 primary 'Bienert, R.' 3 primary 'Balbach, J.' 4 primary 'Heinemann, U.' 5 # _cell.entry_id 2HAX _cell.length_a 74.340 _cell.length_b 64.890 _cell.length_c 31.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HAX _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*TP*TP*TP*TP*T)-3'" 1780.199 2 ? ? ? ? 2 polymer man 'Cold shock protein cspB' 7341.187 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 2 ? ? ? ? 5 water nat water 18.015 234 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name hexathymidine # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DT)(DT)(DT)' TTTTTT C,D ? 2 'polypeptide(L)' no no MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL A,B CSPB_BACCL # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DT n 1 4 DT n 1 5 DT n 1 6 DT n 2 1 MET n 2 2 GLN n 2 3 ARG n 2 4 GLY n 2 5 LYS n 2 6 VAL n 2 7 LYS n 2 8 TRP n 2 9 PHE n 2 10 ASN n 2 11 ASN n 2 12 GLU n 2 13 LYS n 2 14 GLY n 2 15 TYR n 2 16 GLY n 2 17 PHE n 2 18 ILE n 2 19 GLU n 2 20 VAL n 2 21 GLU n 2 22 GLY n 2 23 GLY n 2 24 SER n 2 25 ASP n 2 26 VAL n 2 27 PHE n 2 28 VAL n 2 29 HIS n 2 30 PHE n 2 31 THR n 2 32 ALA n 2 33 ILE n 2 34 GLN n 2 35 GLY n 2 36 GLU n 2 37 GLY n 2 38 PHE n 2 39 LYS n 2 40 THR n 2 41 LEU n 2 42 GLU n 2 43 GLU n 2 44 GLY n 2 45 GLN n 2 46 GLU n 2 47 VAL n 2 48 SER n 2 49 PHE n 2 50 GLU n 2 51 ILE n 2 52 VAL n 2 53 GLN n 2 54 GLY n 2 55 ASN n 2 56 ARG n 2 57 GLY n 2 58 PRO n 2 59 GLN n 2 60 ALA n 2 61 ALA n 2 62 ASN n 2 63 VAL n 2 64 VAL n 2 65 LYS n 2 66 LEU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene cspB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus caldolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1394 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'synthetic deoxyribonucleotide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CSPB_BACCL P41016 2 MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL 1 ? 2 PDB 2HAX 2HAX 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HAX A 1 ? 66 ? P41016 1 ? 66 ? 1 66 2 1 2HAX B 1 ? 66 ? P41016 1 ? 66 ? 1 66 3 2 2HAX C 1 ? 6 ? 2HAX 1 ? 6 ? 1 6 4 2 2HAX D 1 ? 6 ? 2HAX 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2HAX _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '35% 2-methyl-2,4-pentanediol, 0.1 M sodium acetate pH 4.6, 0.02 M CaCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2003-10-27 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator, Si-111 crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9184 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9184 _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 # _reflns.entry_id 2HAX _reflns.d_resolution_high 1.290 _reflns.number_obs 38068 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_netI_over_sigmaI 14.680 _reflns.percent_possible_obs 97.900 _reflns.B_iso_Wilson_estimate 16.166 _reflns.observed_criterion_sigma_F -3 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_low 19.5 _reflns.number_all 38879 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.29 _reflns_shell.d_res_low 1.50 _reflns_shell.number_measured_obs 82397 _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.239 _reflns_shell.meanI_over_sigI_obs 6.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 13269 _reflns_shell.percent_possible_all 95.10 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2HAX _refine.ls_d_res_high 1.290 _refine.ls_d_res_low 19.5 _refine.pdbx_ls_sigma_F 0 _refine.ls_percent_reflns_obs 95.000 _refine.ls_number_reflns_obs 36128 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.132 _refine.ls_R_factor_R_work 0.13 _refine.ls_R_factor_R_free 0.162 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1908 _refine.B_iso_mean 10.870 _refine.aniso_B[1][1] -0.370 _refine.aniso_B[2][2] -0.250 _refine.aniso_B[3][3] 0.620 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.970 _refine.pdbx_overall_ESU_R 0.047 _refine.pdbx_overall_ESU_R_Free 0.045 _refine.overall_SU_ML 0.025 _refine.overall_SU_B 0.585 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 38036 _refine.ls_R_factor_obs 0.132 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 1C9O' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Anisotropic _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1117 _refine_hist.pdbx_number_atoms_nucleic_acid 246 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 250 _refine_hist.number_atoms_total 1614 _refine_hist.d_res_high 1.290 _refine_hist.d_res_low 19.5 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1423 0.018 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1174 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1962 1.567 2.166 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2775 0.980 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 134 4.346 5.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 196 0.096 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1414 0.011 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 249 0.013 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 208 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1295 0.263 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 788 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 142 0.135 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 25 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 75 0.309 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 29 0.165 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 659 2.177 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1065 3.158 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 764 3.878 4.500 ? 'X-RAY DIFFRACTION' ? r_scangle_it 895 5.166 6.000 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1423 1.479 2.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 235 14.831 10.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1379 6.330 10.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.290 _refine_ls_shell.d_res_low 1.335 _refine_ls_shell.pdbx_total_number_of_bins_used 15 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 3408 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.175 _refine_ls_shell.R_factor_R_free 0.228 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 169 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 3577 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HAX _struct.title 'Crystal structure of Bacillus caldolyticus cold shock protein in complex with hexathymidine' _struct.pdbx_descriptor 'PROTEIN/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HAX _struct_keywords.pdbx_keywords 'GENE REGULATION/DNA' _struct_keywords.text 'gene-expression regulator, beta barrel, protein-DNA complex, single-stranded DNA, GENE REGULATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? # _struct_biol.id 1 _struct_biol.details 'In solution binding of single hexanucleotides to unswapped Bc-Csp is observed.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 31 ? ILE C 33 ? THR A 31 ILE A 33 5 ? 3 HELX_P HELX_P2 2 THR D 31 ? ILE D 33 ? THR B 31 ILE B 33 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? E CA . CA ? ? ? 1_555 A DT 6 OP2 ? ? C CA 235 C DT 6 1_555 ? ? ? ? ? ? ? 2.376 ? metalc2 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 235 C HOH 113 1_555 ? ? ? ? ? ? ? 2.545 ? metalc3 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 235 C HOH 114 1_555 ? ? ? ? ? ? ? 2.536 ? metalc4 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? C CA 235 D HOH 11 3_555 ? ? ? ? ? ? ? 2.417 ? metalc5 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? C CA 235 D HOH 36 4_555 ? ? ? ? ? ? ? 2.407 ? metalc6 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? C CA 235 D HOH 10 3_555 ? ? ? ? ? ? ? 2.358 ? metalc7 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? C CA 235 D HOH 12 3_555 ? ? ? ? ? ? ? 2.547 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN C 2 ? ASN C 10 ? GLN A 2 ASN A 10 A 2 TYR C 15 ? VAL C 20 ? TYR A 15 VAL A 20 A 3 GLY C 23 ? HIS C 29 ? GLY A 23 HIS A 29 A 4 GLY D 57 ? LYS D 65 ? GLY B 57 LYS B 65 A 5 GLU D 46 ? GLY D 54 ? GLU B 46 GLY B 54 A 6 GLN C 2 ? ASN C 10 ? GLN A 2 ASN A 10 B 1 GLU C 46 ? GLY C 54 ? GLU A 46 GLY A 54 B 2 GLY C 57 ? LYS C 65 ? GLY A 57 LYS A 65 B 3 VAL D 26 ? HIS D 29 ? VAL B 26 HIS B 29 B 4 TYR D 15 ? GLU D 19 ? TYR B 15 GLU B 19 B 5 GLN D 2 ? ASN D 10 ? GLN B 2 ASN B 10 B 6 GLU C 46 ? GLY C 54 ? GLU A 46 GLY A 54 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS C 5 ? N LYS A 5 O GLU C 19 ? O GLU A 19 A 2 3 N ILE C 18 ? N ILE A 18 O VAL C 26 ? O VAL A 26 A 3 4 N PHE C 27 ? N PHE A 27 O ALA D 60 ? O ALA B 60 A 4 5 O ALA D 61 ? O ALA B 61 N GLU D 50 ? N GLU B 50 A 5 6 O PHE D 49 ? O PHE B 49 N GLN C 2 ? N GLN A 2 B 1 2 N GLU C 50 ? N GLU A 50 O ALA C 61 ? O ALA A 61 B 2 3 N ALA C 60 ? N ALA A 60 O PHE D 27 ? O PHE B 27 B 3 4 O VAL D 26 ? O VAL B 26 N ILE D 18 ? N ILE B 18 B 4 5 O GLU D 19 ? O GLU B 19 N LYS D 5 ? N LYS B 5 B 5 6 O GLY D 4 ? O GLY B 4 N VAL C 47 ? N VAL A 47 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CA C 235' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MPD A 301' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MPD B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 DT A 6 ? DT C 6 . ? 1_555 ? 2 AC1 7 HOH H . ? HOH C 113 . ? 1_555 ? 3 AC1 7 HOH H . ? HOH C 114 . ? 1_555 ? 4 AC1 7 HOH I . ? HOH D 10 . ? 3_555 ? 5 AC1 7 HOH I . ? HOH D 11 . ? 3_555 ? 6 AC1 7 HOH I . ? HOH D 12 . ? 3_555 ? 7 AC1 7 HOH I . ? HOH D 36 . ? 4_555 ? 8 AC2 5 GLY C 54 ? GLY A 54 . ? 1_555 ? 9 AC2 5 ASN C 55 ? ASN A 55 . ? 1_555 ? 10 AC2 5 HOH J . ? HOH A 386 . ? 1_555 ? 11 AC2 5 VAL D 52 ? VAL B 52 . ? 2_565 ? 12 AC2 5 DT B 3 ? DT D 3 . ? 1_555 ? 13 AC3 6 VAL C 52 ? VAL A 52 . ? 2_565 ? 14 AC3 6 HOH J . ? HOH A 304 . ? 2_565 ? 15 AC3 6 ASN D 55 ? ASN B 55 . ? 1_555 ? 16 AC3 6 HOH K . ? HOH B 451 . ? 1_555 ? 17 AC3 6 DT A 3 ? DT C 3 . ? 1_555 ? 18 AC3 6 HOH H . ? HOH C 161 . ? 1_555 ? # _atom_sites.entry_id 2HAX _atom_sites.fract_transf_matrix[1][1] 0.013452 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015411 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032051 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T C . n A 1 2 DT 2 2 2 DT T C . n A 1 3 DT 3 3 3 DT T C . n A 1 4 DT 4 4 4 DT T C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DT 6 6 6 DT T C . n B 1 1 DT 1 1 1 DT T D . n B 1 2 DT 2 2 2 DT T D . n B 1 3 DT 3 3 3 DT T D . n B 1 4 DT 4 4 4 DT T D . n B 1 5 DT 5 5 5 DT T D . n B 1 6 DT 6 6 6 DT T D . n C 2 1 MET 1 1 1 MET MET A . n C 2 2 GLN 2 2 2 GLN GLN A . n C 2 3 ARG 3 3 3 ARG ARG A . n C 2 4 GLY 4 4 4 GLY GLY A . n C 2 5 LYS 5 5 5 LYS LYS A . n C 2 6 VAL 6 6 6 VAL VAL A . n C 2 7 LYS 7 7 7 LYS LYS A . n C 2 8 TRP 8 8 8 TRP TRP A . n C 2 9 PHE 9 9 9 PHE PHE A . n C 2 10 ASN 10 10 10 ASN ASN A . n C 2 11 ASN 11 11 11 ASN ASN A . n C 2 12 GLU 12 12 12 GLU GLU A . n C 2 13 LYS 13 13 13 LYS LYS A . n C 2 14 GLY 14 14 14 GLY GLY A . n C 2 15 TYR 15 15 15 TYR TYR A . n C 2 16 GLY 16 16 16 GLY GLY A . n C 2 17 PHE 17 17 17 PHE PHE A . n C 2 18 ILE 18 18 18 ILE ILE A . n C 2 19 GLU 19 19 19 GLU GLU A . n C 2 20 VAL 20 20 20 VAL VAL A . n C 2 21 GLU 21 21 21 GLU GLU A . n C 2 22 GLY 22 22 22 GLY GLY A . n C 2 23 GLY 23 23 23 GLY GLY A . n C 2 24 SER 24 24 24 SER SER A . n C 2 25 ASP 25 25 25 ASP ASP A . n C 2 26 VAL 26 26 26 VAL VAL A . n C 2 27 PHE 27 27 27 PHE PHE A . n C 2 28 VAL 28 28 28 VAL VAL A . n C 2 29 HIS 29 29 29 HIS HIS A . n C 2 30 PHE 30 30 30 PHE PHE A . n C 2 31 THR 31 31 31 THR THR A . n C 2 32 ALA 32 32 32 ALA ALA A . n C 2 33 ILE 33 33 33 ILE ILE A . n C 2 34 GLN 34 34 34 GLN GLN A . n C 2 35 GLY 35 35 35 GLY GLY A . n C 2 36 GLU 36 36 36 GLU GLU A . n C 2 37 GLY 37 37 37 GLY GLY A . n C 2 38 PHE 38 38 38 PHE PHE A . n C 2 39 LYS 39 39 39 LYS LYS A . n C 2 40 THR 40 40 40 THR THR A . n C 2 41 LEU 41 41 41 LEU LEU A . n C 2 42 GLU 42 42 42 GLU GLU A . n C 2 43 GLU 43 43 43 GLU GLU A . n C 2 44 GLY 44 44 44 GLY GLY A . n C 2 45 GLN 45 45 45 GLN GLN A . n C 2 46 GLU 46 46 46 GLU GLU A . n C 2 47 VAL 47 47 47 VAL VAL A . n C 2 48 SER 48 48 48 SER SER A . n C 2 49 PHE 49 49 49 PHE PHE A . n C 2 50 GLU 50 50 50 GLU GLU A . n C 2 51 ILE 51 51 51 ILE ILE A . n C 2 52 VAL 52 52 52 VAL VAL A . n C 2 53 GLN 53 53 53 GLN GLN A . n C 2 54 GLY 54 54 54 GLY GLY A . n C 2 55 ASN 55 55 55 ASN ASN A . n C 2 56 ARG 56 56 56 ARG ARG A . n C 2 57 GLY 57 57 57 GLY GLY A . n C 2 58 PRO 58 58 58 PRO PRO A . n C 2 59 GLN 59 59 59 GLN GLN A . n C 2 60 ALA 60 60 60 ALA ALA A . n C 2 61 ALA 61 61 61 ALA ALA A . n C 2 62 ASN 62 62 62 ASN ASN A . n C 2 63 VAL 63 63 63 VAL VAL A . n C 2 64 VAL 64 64 64 VAL VAL A . n C 2 65 LYS 65 65 65 LYS LYS A . n C 2 66 LEU 66 66 66 LEU LEU A . n D 2 1 MET 1 1 1 MET MET B . n D 2 2 GLN 2 2 2 GLN GLN B . n D 2 3 ARG 3 3 3 ARG ARG B . n D 2 4 GLY 4 4 4 GLY GLY B . n D 2 5 LYS 5 5 5 LYS LYS B . n D 2 6 VAL 6 6 6 VAL VAL B . n D 2 7 LYS 7 7 7 LYS LYS B . n D 2 8 TRP 8 8 8 TRP TRP B . n D 2 9 PHE 9 9 9 PHE PHE B . n D 2 10 ASN 10 10 10 ASN ASN B . n D 2 11 ASN 11 11 11 ASN ASN B . n D 2 12 GLU 12 12 12 GLU GLU B . n D 2 13 LYS 13 13 13 LYS LYS B . n D 2 14 GLY 14 14 14 GLY GLY B . n D 2 15 TYR 15 15 15 TYR TYR B . n D 2 16 GLY 16 16 16 GLY GLY B . n D 2 17 PHE 17 17 17 PHE PHE B . n D 2 18 ILE 18 18 18 ILE ILE B . n D 2 19 GLU 19 19 19 GLU GLU B . n D 2 20 VAL 20 20 20 VAL VAL B . n D 2 21 GLU 21 21 21 GLU GLU B . n D 2 22 GLY 22 22 22 GLY GLY B . n D 2 23 GLY 23 23 23 GLY GLY B . n D 2 24 SER 24 24 24 SER SER B . n D 2 25 ASP 25 25 25 ASP ASP B . n D 2 26 VAL 26 26 26 VAL VAL B . n D 2 27 PHE 27 27 27 PHE PHE B . n D 2 28 VAL 28 28 28 VAL VAL B . n D 2 29 HIS 29 29 29 HIS HIS B . n D 2 30 PHE 30 30 30 PHE PHE B . n D 2 31 THR 31 31 31 THR THR B . n D 2 32 ALA 32 32 32 ALA ALA B . n D 2 33 ILE 33 33 33 ILE ILE B . n D 2 34 GLN 34 34 34 GLN GLN B . n D 2 35 GLY 35 35 35 GLY GLY B . n D 2 36 GLU 36 36 36 GLU GLU B . n D 2 37 GLY 37 37 37 GLY GLY B . n D 2 38 PHE 38 38 38 PHE PHE B . n D 2 39 LYS 39 39 39 LYS LYS B . n D 2 40 THR 40 40 40 THR THR B . n D 2 41 LEU 41 41 41 LEU LEU B . n D 2 42 GLU 42 42 42 GLU GLU B . n D 2 43 GLU 43 43 43 GLU GLU B . n D 2 44 GLY 44 44 44 GLY GLY B . n D 2 45 GLN 45 45 45 GLN GLN B . n D 2 46 GLU 46 46 46 GLU GLU B . n D 2 47 VAL 47 47 47 VAL VAL B . n D 2 48 SER 48 48 48 SER SER B . n D 2 49 PHE 49 49 49 PHE PHE B . n D 2 50 GLU 50 50 50 GLU GLU B . n D 2 51 ILE 51 51 51 ILE ILE B . n D 2 52 VAL 52 52 52 VAL VAL B . n D 2 53 GLN 53 53 53 GLN GLN B . n D 2 54 GLY 54 54 54 GLY GLY B . n D 2 55 ASN 55 55 55 ASN ASN B . n D 2 56 ARG 56 56 56 ARG ARG B . n D 2 57 GLY 57 57 57 GLY GLY B . n D 2 58 PRO 58 58 58 PRO PRO B . n D 2 59 GLN 59 59 59 GLN GLN B . n D 2 60 ALA 60 60 60 ALA ALA B . n D 2 61 ALA 61 61 61 ALA ALA B . n D 2 62 ASN 62 62 62 ASN ASN B . n D 2 63 VAL 63 63 63 VAL VAL B . n D 2 64 VAL 64 64 64 VAL VAL B . n D 2 65 LYS 65 65 65 LYS LYS B . n D 2 66 LEU 66 66 66 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CA 1 235 235 CA CA C . F 4 MPD 1 301 301 MPD MPD A . G 4 MPD 1 401 401 MPD MPD B . H 5 HOH 1 88 88 HOH HOH C . H 5 HOH 2 89 89 HOH HOH C . H 5 HOH 3 97 97 HOH HOH C . H 5 HOH 4 98 98 HOH HOH C . H 5 HOH 5 99 99 HOH HOH C . H 5 HOH 6 103 103 HOH HOH C . H 5 HOH 7 104 104 HOH HOH C . H 5 HOH 8 105 105 HOH HOH C . H 5 HOH 9 107 107 HOH HOH C . H 5 HOH 10 108 108 HOH HOH C . H 5 HOH 11 109 109 HOH HOH C . H 5 HOH 12 110 110 HOH HOH C . H 5 HOH 13 112 112 HOH HOH C . H 5 HOH 14 113 113 HOH HOH C . H 5 HOH 15 114 114 HOH HOH C . H 5 HOH 16 115 115 HOH HOH C . H 5 HOH 17 118 118 HOH HOH C . H 5 HOH 18 161 161 HOH HOH C . H 5 HOH 19 164 164 HOH HOH C . H 5 HOH 20 165 165 HOH HOH C . H 5 HOH 21 166 166 HOH HOH C . H 5 HOH 22 167 167 HOH HOH C . H 5 HOH 23 168 168 HOH HOH C . H 5 HOH 24 169 169 HOH HOH C . H 5 HOH 25 177 177 HOH HOH C . H 5 HOH 26 179 179 HOH HOH C . H 5 HOH 27 180 180 HOH HOH C . H 5 HOH 28 181 181 HOH HOH C . H 5 HOH 29 182 182 HOH HOH C . H 5 HOH 30 183 183 HOH HOH C . H 5 HOH 31 184 184 HOH HOH C . H 5 HOH 32 185 185 HOH HOH C . I 5 HOH 1 7 2 HOH HOH D . I 5 HOH 2 8 3 HOH HOH D . I 5 HOH 3 9 4 HOH HOH D . I 5 HOH 4 10 7 HOH HOH D . I 5 HOH 5 11 8 HOH HOH D . I 5 HOH 6 12 9 HOH HOH D . I 5 HOH 7 13 10 HOH HOH D . I 5 HOH 8 14 11 HOH HOH D . I 5 HOH 9 15 41 HOH HOH D . I 5 HOH 10 16 42 HOH HOH D . I 5 HOH 11 17 49 HOH HOH D . I 5 HOH 12 18 53 HOH HOH D . I 5 HOH 13 19 54 HOH HOH D . I 5 HOH 14 20 55 HOH HOH D . I 5 HOH 15 21 58 HOH HOH D . I 5 HOH 16 22 60 HOH HOH D . I 5 HOH 17 23 61 HOH HOH D . I 5 HOH 18 24 62 HOH HOH D . I 5 HOH 19 25 63 HOH HOH D . I 5 HOH 20 26 64 HOH HOH D . I 5 HOH 21 27 65 HOH HOH D . I 5 HOH 22 28 66 HOH HOH D . I 5 HOH 23 29 67 HOH HOH D . I 5 HOH 24 30 201 HOH HOH D . I 5 HOH 25 31 207 HOH HOH D . I 5 HOH 26 32 208 HOH HOH D . I 5 HOH 27 33 209 HOH HOH D . I 5 HOH 28 34 217 HOH HOH D . I 5 HOH 29 35 218 HOH HOH D . I 5 HOH 30 36 219 HOH HOH D . I 5 HOH 31 37 220 HOH HOH D . I 5 HOH 32 38 223 HOH HOH D . I 5 HOH 33 39 224 HOH HOH D . I 5 HOH 34 40 225 HOH HOH D . J 5 HOH 1 302 1 HOH HOH A . J 5 HOH 2 303 22 HOH HOH A . J 5 HOH 3 304 23 HOH HOH A . J 5 HOH 4 305 24 HOH HOH A . J 5 HOH 5 306 26 HOH HOH A . J 5 HOH 6 307 27 HOH HOH A . J 5 HOH 7 308 28 HOH HOH A . J 5 HOH 8 309 29 HOH HOH A . J 5 HOH 9 310 30 HOH HOH A . J 5 HOH 10 311 31 HOH HOH A . J 5 HOH 11 312 32 HOH HOH A . J 5 HOH 12 313 35 HOH HOH A . J 5 HOH 13 314 36 HOH HOH A . J 5 HOH 14 315 37 HOH HOH A . J 5 HOH 15 316 38 HOH HOH A . J 5 HOH 16 317 43 HOH HOH A . J 5 HOH 17 318 44 HOH HOH A . J 5 HOH 18 319 45 HOH HOH A . J 5 HOH 19 320 59 HOH HOH A . J 5 HOH 20 321 68 HOH HOH A . J 5 HOH 21 322 69 HOH HOH A . J 5 HOH 22 323 70 HOH HOH A . J 5 HOH 23 324 71 HOH HOH A . J 5 HOH 24 325 72 HOH HOH A . J 5 HOH 25 326 73 HOH HOH A . J 5 HOH 26 327 74 HOH HOH A . J 5 HOH 27 328 75 HOH HOH A . J 5 HOH 28 329 76 HOH HOH A . J 5 HOH 29 330 77 HOH HOH A . J 5 HOH 30 331 78 HOH HOH A . J 5 HOH 31 332 79 HOH HOH A . J 5 HOH 32 333 86 HOH HOH A . J 5 HOH 33 334 87 HOH HOH A . J 5 HOH 34 335 90 HOH HOH A . J 5 HOH 35 336 91 HOH HOH A . J 5 HOH 36 337 92 HOH HOH A . J 5 HOH 37 338 93 HOH HOH A . J 5 HOH 38 339 94 HOH HOH A . J 5 HOH 39 340 95 HOH HOH A . J 5 HOH 40 341 96 HOH HOH A . J 5 HOH 41 342 100 HOH HOH A . J 5 HOH 42 343 101 HOH HOH A . J 5 HOH 43 344 102 HOH HOH A . J 5 HOH 44 345 111 HOH HOH A . J 5 HOH 45 346 116 HOH HOH A . J 5 HOH 46 347 117 HOH HOH A . J 5 HOH 47 348 119 HOH HOH A . J 5 HOH 48 349 120 HOH HOH A . J 5 HOH 49 350 121 HOH HOH A . J 5 HOH 50 351 122 HOH HOH A . J 5 HOH 51 352 123 HOH HOH A . J 5 HOH 52 353 127 HOH HOH A . J 5 HOH 53 354 128 HOH HOH A . J 5 HOH 54 355 129 HOH HOH A . J 5 HOH 55 356 130 HOH HOH A . J 5 HOH 56 357 140 HOH HOH A . J 5 HOH 57 358 142 HOH HOH A . J 5 HOH 58 359 143 HOH HOH A . J 5 HOH 59 360 144 HOH HOH A . J 5 HOH 60 361 145 HOH HOH A . J 5 HOH 61 362 146 HOH HOH A . J 5 HOH 62 363 147 HOH HOH A . J 5 HOH 63 364 148 HOH HOH A . J 5 HOH 64 365 149 HOH HOH A . J 5 HOH 65 366 150 HOH HOH A . J 5 HOH 66 367 151 HOH HOH A . J 5 HOH 67 368 152 HOH HOH A . J 5 HOH 68 369 153 HOH HOH A . J 5 HOH 69 370 154 HOH HOH A . J 5 HOH 70 371 155 HOH HOH A . J 5 HOH 71 372 156 HOH HOH A . J 5 HOH 72 373 158 HOH HOH A . J 5 HOH 73 374 170 HOH HOH A . J 5 HOH 74 375 172 HOH HOH A . J 5 HOH 75 376 186 HOH HOH A . J 5 HOH 76 377 187 HOH HOH A . J 5 HOH 77 378 188 HOH HOH A . J 5 HOH 78 379 189 HOH HOH A . J 5 HOH 79 380 192 HOH HOH A . J 5 HOH 80 381 193 HOH HOH A . J 5 HOH 81 382 197 HOH HOH A . J 5 HOH 82 383 198 HOH HOH A . J 5 HOH 83 384 199 HOH HOH A . J 5 HOH 84 385 200 HOH HOH A . J 5 HOH 85 386 203 HOH HOH A . J 5 HOH 86 387 204 HOH HOH A . J 5 HOH 87 388 205 HOH HOH A . J 5 HOH 88 389 206 HOH HOH A . J 5 HOH 89 390 210 HOH HOH A . J 5 HOH 90 391 226 HOH HOH A . J 5 HOH 91 392 227 HOH HOH A . J 5 HOH 92 393 228 HOH HOH A . J 5 HOH 93 394 229 HOH HOH A . J 5 HOH 94 395 230 HOH HOH A . J 5 HOH 95 396 234 HOH HOH A . K 5 HOH 1 402 5 HOH HOH B . K 5 HOH 2 403 6 HOH HOH B . K 5 HOH 3 404 12 HOH HOH B . K 5 HOH 4 405 13 HOH HOH B . K 5 HOH 5 406 14 HOH HOH B . K 5 HOH 6 407 15 HOH HOH B . K 5 HOH 7 408 16 HOH HOH B . K 5 HOH 8 409 17 HOH HOH B . K 5 HOH 9 410 18 HOH HOH B . K 5 HOH 10 411 19 HOH HOH B . K 5 HOH 11 412 20 HOH HOH B . K 5 HOH 12 413 21 HOH HOH B . K 5 HOH 13 414 25 HOH HOH B . K 5 HOH 14 415 33 HOH HOH B . K 5 HOH 15 416 34 HOH HOH B . K 5 HOH 16 417 39 HOH HOH B . K 5 HOH 17 418 40 HOH HOH B . K 5 HOH 18 419 46 HOH HOH B . K 5 HOH 19 420 47 HOH HOH B . K 5 HOH 20 421 48 HOH HOH B . K 5 HOH 21 422 50 HOH HOH B . K 5 HOH 22 423 51 HOH HOH B . K 5 HOH 23 424 52 HOH HOH B . K 5 HOH 24 425 56 HOH HOH B . K 5 HOH 25 426 57 HOH HOH B . K 5 HOH 26 427 80 HOH HOH B . K 5 HOH 27 428 81 HOH HOH B . K 5 HOH 28 429 82 HOH HOH B . K 5 HOH 29 430 83 HOH HOH B . K 5 HOH 30 431 84 HOH HOH B . K 5 HOH 31 432 85 HOH HOH B . K 5 HOH 32 433 106 HOH HOH B . K 5 HOH 33 434 124 HOH HOH B . K 5 HOH 34 435 125 HOH HOH B . K 5 HOH 35 436 126 HOH HOH B . K 5 HOH 36 437 131 HOH HOH B . K 5 HOH 37 438 132 HOH HOH B . K 5 HOH 38 439 133 HOH HOH B . K 5 HOH 39 440 134 HOH HOH B . K 5 HOH 40 441 135 HOH HOH B . K 5 HOH 41 442 136 HOH HOH B . K 5 HOH 42 443 137 HOH HOH B . K 5 HOH 43 444 138 HOH HOH B . K 5 HOH 44 445 139 HOH HOH B . K 5 HOH 45 446 141 HOH HOH B . K 5 HOH 46 447 157 HOH HOH B . K 5 HOH 47 448 159 HOH HOH B . K 5 HOH 48 449 160 HOH HOH B . K 5 HOH 49 450 162 HOH HOH B . K 5 HOH 50 451 163 HOH HOH B . K 5 HOH 51 452 171 HOH HOH B . K 5 HOH 52 453 173 HOH HOH B . K 5 HOH 53 454 174 HOH HOH B . K 5 HOH 54 455 175 HOH HOH B . K 5 HOH 55 456 176 HOH HOH B . K 5 HOH 56 457 178 HOH HOH B . K 5 HOH 57 458 190 HOH HOH B . K 5 HOH 58 459 191 HOH HOH B . K 5 HOH 59 460 194 HOH HOH B . K 5 HOH 60 461 195 HOH HOH B . K 5 HOH 61 462 196 HOH HOH B . K 5 HOH 62 463 202 HOH HOH B . K 5 HOH 63 464 211 HOH HOH B . K 5 HOH 64 465 212 HOH HOH B . K 5 HOH 65 466 213 HOH HOH B . K 5 HOH 66 467 214 HOH HOH B . K 5 HOH 67 468 215 HOH HOH B . K 5 HOH 68 469 216 HOH HOH B . K 5 HOH 69 470 221 HOH HOH B . K 5 HOH 70 471 222 HOH HOH B . K 5 HOH 71 472 231 HOH HOH B . K 5 HOH 72 473 232 HOH HOH B . K 5 HOH 73 474 233 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id D _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 13 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? H HOH . ? C HOH 113 ? 1_555 77.5 ? 2 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? H HOH . ? C HOH 114 ? 1_555 129.1 ? 3 O ? H HOH . ? C HOH 113 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? H HOH . ? C HOH 114 ? 1_555 73.0 ? 4 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 11 ? 3_555 85.6 ? 5 O ? H HOH . ? C HOH 113 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 11 ? 3_555 150.5 ? 6 O ? H HOH . ? C HOH 114 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 11 ? 3_555 135.2 ? 7 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 36 ? 4_555 83.0 ? 8 O ? H HOH . ? C HOH 113 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 36 ? 4_555 76.4 ? 9 O ? H HOH . ? C HOH 114 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 36 ? 4_555 127.1 ? 10 O ? I HOH . ? D HOH 11 ? 3_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 36 ? 4_555 77.8 ? 11 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 10 ? 3_555 89.8 ? 12 O ? H HOH . ? C HOH 113 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 10 ? 3_555 120.8 ? 13 O ? H HOH . ? C HOH 114 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 10 ? 3_555 71.8 ? 14 O ? I HOH . ? D HOH 11 ? 3_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 10 ? 3_555 82.6 ? 15 O ? I HOH . ? D HOH 36 ? 4_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 10 ? 3_555 159.5 ? 16 OP2 ? A DT 6 ? C DT 6 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 159.1 ? 17 O ? H HOH . ? C HOH 113 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 120.8 ? 18 O ? H HOH . ? C HOH 114 ? 1_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 69.8 ? 19 O ? I HOH . ? D HOH 11 ? 3_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 73.6 ? 20 O ? I HOH . ? D HOH 36 ? 4_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 91.4 ? 21 O ? I HOH . ? D HOH 10 ? 3_555 CA ? E CA . ? C CA 235 ? 1_555 O ? I HOH . ? D HOH 12 ? 3_555 88.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' # _pdbx_phasing_MR.entry_id 2HAX _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 0.394 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.584 _pdbx_phasing_MR.correlation_coeff_Io_to_Ic 0.590 _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 8.000 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 8.000 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 1 AMoRE . ? program 'Jorge Navaza' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 MAR345 . ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? 6 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 4 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). THE AUTHORS STATE THAT THE STRUCTURE SHOWS A SWAPPED PROTEIN DIMER (2 CHAINS) IN COMPLEX WITH TWO HEXANUCLEOTIDES, WHEREAS IN SOLUTION THEY ONLY OBSERVE A SINGLE PROTEIN CHAIN IN COMPLEX WITH A SINGLE HEXANUCLEOTIDE. THEY THEREFORE EXPECT THAT THE BIOLOGICAL UNIT IS A SINGLE CLOSED MONOMERIC PROTEIN CHAIN WITH A SINGLE LIGAND MOLECULE. SUCH A CLOSED MONOMERIC ENTITY WOULD CORRESPOND TO RESIDUES 1-36 OF CHAIN A AND RESIDUES 37-66 OF CHAIN B AND IT WOULD BE IN COMPLEX WITH LIGAND MOLECULE C. A SECOND BIOLOGICAL UNIT WOULD CONSIST OF RESIDUES 1-36 OF CHAIN B AND RESIDUES 37-66 OF CHAIN A. THIS MONOMERIC ENTITY WOULD BE IN COMPLEX WITH MOLECULE D. ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 5 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 5 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.360 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.059 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 2 ? ? "C1'" C DT 2 ? ? N1 C DT 2 ? ? 110.17 108.30 1.87 0.30 N 2 1 "O4'" C DT 4 ? ? "C1'" C DT 4 ? ? N1 C DT 4 ? ? 103.69 108.00 -4.31 0.70 N 3 1 N3 C DT 6 ? ? C4 C DT 6 ? ? O4 C DT 6 ? ? 124.44 119.90 4.54 0.60 N 4 1 C5 C DT 6 ? ? C4 C DT 6 ? ? O4 C DT 6 ? ? 119.50 124.90 -5.40 0.70 N 5 1 C6 C DT 6 ? ? C5 C DT 6 ? ? C7 C DT 6 ? ? 118.95 122.90 -3.95 0.60 N 6 1 "O4'" D DT 2 ? ? "C1'" D DT 2 ? ? N1 D DT 2 ? ? 110.34 108.30 2.04 0.30 N 7 1 OP1 D DT 6 ? ? P D DT 6 ? ? OP2 D DT 6 ? ? 110.38 119.60 -9.22 1.50 N 8 1 N3 D DT 6 ? B C4 D DT 6 ? B O4 D DT 6 ? B 124.31 119.90 4.41 0.60 N 9 1 C5 D DT 6 ? B C4 D DT 6 ? B O4 D DT 6 ? B 120.30 124.90 -4.60 0.70 N # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 5 water HOH #