HEADER LYASE 14-JUN-06 2HBX TITLE CRYSTAL STRUCTURE OF ALPHA-AMINO-BETA-CARBOXYMUCONATE-EPSILON- TITLE 2 SEMIALDEHYDE-DECARBOXYLASE (ACMSD) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-AMINO-3-CARBOXYMUCONATE 6-SEMIALDEHYDE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALPHA-AMINO-BETA-CARBOXYMUCONATE-EPSILON-SEMIALDEHYDE- COMPND 5 DECARBOXYLASE, ACMSD; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 STRAIN: KU-7; SOURCE 5 GENE: NBAD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSD 80 KEYWDS ACMSD, TIM-BARREL, DECARBOXYLASE, METALOENZYME, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR D.MARTYNOWSKI,Y.EYOBO,T.LI,K.YANG,A.LIU,H.ZHANG REVDAT 5 14-FEB-24 2HBX 1 REMARK LINK REVDAT 4 18-OCT-17 2HBX 1 REMARK REVDAT 3 13-JUL-11 2HBX 1 VERSN REVDAT 2 24-FEB-09 2HBX 1 VERSN REVDAT 1 19-SEP-06 2HBX 0 JRNL AUTH D.MARTYNOWSKI,Y.EYOBO,T.LI,K.YANG,A.LIU,H.ZHANG JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 ALPHA-AMINO-BETA-CARBOXYMUCONATE-EPSILON-SEMIALDEHYDE JRNL TITL 3 DECARBOXYLASE: INSIGHT INTO THE ACTIVE SITE AND CATALYTIC JRNL TITL 4 MECHANISM OF A NOVEL DECARBOXYLATION REACTION. JRNL REF BIOCHEMISTRY V. 45 10412 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 16939194 JRNL DOI 10.1021/BI060903Q REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 25404 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1293 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1725 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5190 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.07000 REMARK 3 B22 (A**2) : 1.07000 REMARK 3 B33 (A**2) : -2.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.660 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.285 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.230 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.582 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5324 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7216 ; 1.345 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 662 ; 6.220 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 250 ;39.784 ;24.160 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 876 ;16.923 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.019 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 766 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4122 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2626 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3674 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 220 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 43 ; 0.185 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.315 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3390 ; 0.609 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5296 ; 1.024 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2200 ; 1.647 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1920 ; 2.544 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 14 REMARK 3 RESIDUE RANGE : A 56 A 334 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1061 -20.8616 27.8796 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: -0.4241 REMARK 3 T33: -0.1887 T12: -0.0811 REMARK 3 T13: 0.0167 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.2161 L22: 1.5314 REMARK 3 L33: 2.2571 L12: 0.1457 REMARK 3 L13: 1.4191 L23: 0.3939 REMARK 3 S TENSOR REMARK 3 S11: 0.2415 S12: -0.1655 S13: 0.0128 REMARK 3 S21: 0.4467 S22: -0.0468 S23: 0.1643 REMARK 3 S31: 0.3931 S32: -0.1883 S33: -0.1947 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 55 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4276 -21.0125 6.5394 REMARK 3 T TENSOR REMARK 3 T11: -0.0820 T22: -0.2932 REMARK 3 T33: -0.1466 T12: -0.0749 REMARK 3 T13: -0.0439 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 5.1047 L22: 9.0298 REMARK 3 L33: 7.4471 L12: 4.0501 REMARK 3 L13: 2.9644 L23: 0.9173 REMARK 3 S TENSOR REMARK 3 S11: -0.1509 S12: 0.5450 S13: -0.1792 REMARK 3 S21: -0.1463 S22: 0.2416 S23: 0.0292 REMARK 3 S31: -0.1158 S32: 0.0746 S33: -0.0908 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 14 REMARK 3 RESIDUE RANGE : B 56 B 334 REMARK 3 ORIGIN FOR THE GROUP (A): 72.2238 -33.8009 19.5219 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: -0.1836 REMARK 3 T33: -0.1148 T12: 0.2889 REMARK 3 T13: -0.3397 T23: -0.1717 REMARK 3 L TENSOR REMARK 3 L11: 3.2131 L22: 1.5677 REMARK 3 L33: 1.5661 L12: 1.2924 REMARK 3 L13: 1.1211 L23: -0.2140 REMARK 3 S TENSOR REMARK 3 S11: 0.3927 S12: 0.6163 S13: -0.5274 REMARK 3 S21: 0.4448 S22: -0.0697 S23: -0.2806 REMARK 3 S31: 0.4837 S32: 0.5849 S33: -0.3230 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 55 REMARK 3 ORIGIN FOR THE GROUP (A): 86.6878 -13.7406 17.5396 REMARK 3 T TENSOR REMARK 3 T11: -0.0179 T22: -0.0351 REMARK 3 T33: -0.1812 T12: -0.0974 REMARK 3 T13: -0.2148 T23: 0.1867 REMARK 3 L TENSOR REMARK 3 L11: 7.5449 L22: 9.3755 REMARK 3 L33: 10.8853 L12: 2.5815 REMARK 3 L13: 0.2773 L23: 3.6238 REMARK 3 S TENSOR REMARK 3 S11: -0.1600 S12: 0.9918 S13: 0.4508 REMARK 3 S21: -0.2604 S22: 0.5205 S23: -0.6419 REMARK 3 S31: -1.5220 S32: 0.6079 S33: -0.3605 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : GRAPHIT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25447 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 5000, 0.2M MGCL2, PH 8.75, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.78450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.78450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 83.95500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.78450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.78450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.95500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.78450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.78450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 83.95500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.78450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.78450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.95500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE 2 BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT (CHAIN A AND CHAIN B). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 15 86.54 -68.19 REMARK 500 ASP A 25 108.42 -168.69 REMARK 500 ALA A 79 143.90 -39.16 REMARK 500 ASN A 111 79.83 -165.89 REMARK 500 VAL A 196 -62.06 -107.23 REMARK 500 ASP A 294 30.17 70.58 REMARK 500 ASN A 312 34.66 -96.06 REMARK 500 SER A 323 -60.37 -150.32 REMARK 500 ASN A 333 79.50 -62.53 REMARK 500 ARG B 15 58.74 -90.96 REMARK 500 ASP B 25 112.59 -161.17 REMARK 500 ALA B 90 -47.30 -28.77 REMARK 500 ASN B 111 83.88 -166.54 REMARK 500 ALA B 270 80.12 -63.87 REMARK 500 ASP B 294 26.95 80.21 REMARK 500 SER B 323 -64.56 -154.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 501 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 9 NE2 REMARK 620 2 HIS A 11 NE2 95.1 REMARK 620 3 HIS A 177 NE2 102.9 100.5 REMARK 620 4 HIS A 228 NE2 88.7 175.9 80.3 REMARK 620 5 ASP A 294 OD2 81.3 77.1 175.4 101.9 REMARK 620 6 HOH A 578 O 165.5 94.0 86.5 82.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 401 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 9 NE2 REMARK 620 2 HIS B 11 NE2 94.8 REMARK 620 3 HIS B 177 NE2 101.1 87.7 REMARK 620 4 HIS B 228 NE2 88.3 174.0 86.7 REMARK 620 5 ASP B 294 OD1 78.3 81.3 168.9 104.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HBV RELATED DB: PDB DBREF 2HBX A 1 334 UNP Q83V25 Q83V25_PSEFL 1 334 DBREF 2HBX B 1 334 UNP Q83V25 Q83V25_PSEFL 1 334 SEQRES 1 A 334 MET LYS LYS PRO ARG ILE ASP MET HIS SER HIS PHE PHE SEQRES 2 A 334 PRO ARG ILE SER GLU GLN GLU ALA ALA LYS PHE ASP ALA SEQRES 3 A 334 ASN HIS ALA PRO TRP LEU GLN VAL SER ALA LYS GLY ASP SEQRES 4 A 334 THR GLY SER ILE MET MET GLY LYS ASN ASN PHE ARG PRO SEQRES 5 A 334 VAL TYR GLN ALA LEU TRP ASP PRO ALA PHE ARG ILE GLU SEQRES 6 A 334 GLU MET ASP ALA GLN GLY VAL ASP VAL GLN VAL THR CYS SEQRES 7 A 334 ALA THR PRO VAL MET PHE GLY TYR THR TRP GLU ALA ASN SEQRES 8 A 334 LYS ALA ALA GLN TRP ALA GLU ARG MET ASN ASP PHE ALA SEQRES 9 A 334 LEU GLU PHE ALA ALA HIS ASN PRO GLN ARG ILE LYS VAL SEQRES 10 A 334 LEU ALA GLN VAL PRO LEU GLN ASP LEU ASP LEU ALA CYS SEQRES 11 A 334 LYS GLU ALA SER ARG ALA VAL ALA ALA GLY HIS LEU GLY SEQRES 12 A 334 ILE GLN ILE GLY ASN HIS LEU GLY ASP LYS ASP LEU ASP SEQRES 13 A 334 ASP ALA THR LEU GLU ALA PHE LEU THR HIS CYS ALA ASN SEQRES 14 A 334 GLU ASP ILE PRO ILE LEU VAL HIS PRO TRP ASP MET MET SEQRES 15 A 334 GLY GLY GLN ARG MET LYS LYS TRP MET LEU PRO TRP LEU SEQRES 16 A 334 VAL ALA MET PRO ALA GLU THR GLN LEU ALA ILE LEU SER SEQRES 17 A 334 LEU ILE LEU SER GLY ALA PHE GLU ARG ILE PRO LYS SER SEQRES 18 A 334 LEU LYS ILE CYS PHE GLY HIS GLY GLY GLY SER PHE ALA SEQRES 19 A 334 PHE LEU LEU GLY ARG VAL ASP ASN ALA TRP ARG HIS ARG SEQRES 20 A 334 ASP ILE VAL ARG GLU ASP CYS PRO ARG PRO PRO SER GLU SEQRES 21 A 334 TYR VAL ASP ARG PHE PHE VAL ASP SER ALA VAL PHE ASN SEQRES 22 A 334 PRO GLY ALA LEU GLU LEU LEU VAL SER VAL MET GLY GLU SEQRES 23 A 334 ASP ARG VAL MET LEU GLY SER ASP TYR PRO PHE PRO LEU SEQRES 24 A 334 GLY GLU GLN LYS ILE GLY GLY LEU VAL LEU SER SER ASN SEQRES 25 A 334 LEU GLY GLU SER ALA LYS ASP LYS ILE ILE SER GLY ASN SEQRES 26 A 334 ALA SER LYS PHE PHE ASN ILE ASN VAL SEQRES 1 B 334 MET LYS LYS PRO ARG ILE ASP MET HIS SER HIS PHE PHE SEQRES 2 B 334 PRO ARG ILE SER GLU GLN GLU ALA ALA LYS PHE ASP ALA SEQRES 3 B 334 ASN HIS ALA PRO TRP LEU GLN VAL SER ALA LYS GLY ASP SEQRES 4 B 334 THR GLY SER ILE MET MET GLY LYS ASN ASN PHE ARG PRO SEQRES 5 B 334 VAL TYR GLN ALA LEU TRP ASP PRO ALA PHE ARG ILE GLU SEQRES 6 B 334 GLU MET ASP ALA GLN GLY VAL ASP VAL GLN VAL THR CYS SEQRES 7 B 334 ALA THR PRO VAL MET PHE GLY TYR THR TRP GLU ALA ASN SEQRES 8 B 334 LYS ALA ALA GLN TRP ALA GLU ARG MET ASN ASP PHE ALA SEQRES 9 B 334 LEU GLU PHE ALA ALA HIS ASN PRO GLN ARG ILE LYS VAL SEQRES 10 B 334 LEU ALA GLN VAL PRO LEU GLN ASP LEU ASP LEU ALA CYS SEQRES 11 B 334 LYS GLU ALA SER ARG ALA VAL ALA ALA GLY HIS LEU GLY SEQRES 12 B 334 ILE GLN ILE GLY ASN HIS LEU GLY ASP LYS ASP LEU ASP SEQRES 13 B 334 ASP ALA THR LEU GLU ALA PHE LEU THR HIS CYS ALA ASN SEQRES 14 B 334 GLU ASP ILE PRO ILE LEU VAL HIS PRO TRP ASP MET MET SEQRES 15 B 334 GLY GLY GLN ARG MET LYS LYS TRP MET LEU PRO TRP LEU SEQRES 16 B 334 VAL ALA MET PRO ALA GLU THR GLN LEU ALA ILE LEU SER SEQRES 17 B 334 LEU ILE LEU SER GLY ALA PHE GLU ARG ILE PRO LYS SER SEQRES 18 B 334 LEU LYS ILE CYS PHE GLY HIS GLY GLY GLY SER PHE ALA SEQRES 19 B 334 PHE LEU LEU GLY ARG VAL ASP ASN ALA TRP ARG HIS ARG SEQRES 20 B 334 ASP ILE VAL ARG GLU ASP CYS PRO ARG PRO PRO SER GLU SEQRES 21 B 334 TYR VAL ASP ARG PHE PHE VAL ASP SER ALA VAL PHE ASN SEQRES 22 B 334 PRO GLY ALA LEU GLU LEU LEU VAL SER VAL MET GLY GLU SEQRES 23 B 334 ASP ARG VAL MET LEU GLY SER ASP TYR PRO PHE PRO LEU SEQRES 24 B 334 GLY GLU GLN LYS ILE GLY GLY LEU VAL LEU SER SER ASN SEQRES 25 B 334 LEU GLY GLU SER ALA LYS ASP LYS ILE ILE SER GLY ASN SEQRES 26 B 334 ALA SER LYS PHE PHE ASN ILE ASN VAL HET CO A 501 1 HET CO B 401 1 HETNAM CO COBALT (II) ION FORMUL 3 CO 2(CO 2+) FORMUL 5 HOH *127(H2 O) HELIX 1 1 SER A 17 ALA A 26 1 10 HELIX 2 2 ALA A 56 TRP A 58 5 3 HELIX 3 3 ASP A 59 GLY A 71 1 13 HELIX 4 4 PRO A 81 PHE A 84 5 4 HELIX 5 5 GLU A 89 HIS A 110 1 22 HELIX 6 6 ASP A 125 ALA A 139 1 15 HELIX 7 7 ASP A 157 GLU A 170 1 14 HELIX 8 8 LYS A 188 TRP A 190 5 3 HELIX 9 9 MET A 191 VAL A 196 1 6 HELIX 10 10 VAL A 196 SER A 212 1 17 HELIX 11 11 GLY A 213 ILE A 218 1 6 HELIX 12 12 HIS A 228 GLY A 231 5 4 HELIX 13 13 SER A 232 ARG A 247 1 16 HELIX 14 14 ARG A 247 GLU A 252 1 6 HELIX 15 15 PRO A 257 PHE A 265 5 9 HELIX 16 16 ASN A 273 GLY A 285 1 13 HELIX 17 17 GLY A 305 SER A 310 1 6 HELIX 18 18 GLY A 314 SER A 323 1 10 HELIX 19 19 SER A 323 ASN A 331 1 9 HELIX 20 20 SER B 17 LYS B 23 1 7 HELIX 21 21 ALA B 56 TRP B 58 5 3 HELIX 22 22 ASP B 59 GLY B 71 1 13 HELIX 23 23 PRO B 81 PHE B 84 5 4 HELIX 24 24 GLU B 89 HIS B 110 1 22 HELIX 25 25 ASP B 125 ALA B 139 1 15 HELIX 26 26 ASP B 157 ASP B 171 1 15 HELIX 27 27 MET B 191 VAL B 196 1 6 HELIX 28 28 VAL B 196 GLY B 213 1 18 HELIX 29 29 GLY B 213 ILE B 218 1 6 HELIX 30 30 HIS B 228 GLY B 231 5 4 HELIX 31 31 SER B 232 ARG B 247 1 16 HELIX 32 32 ARG B 247 GLU B 252 1 6 HELIX 33 33 PRO B 257 PHE B 265 5 9 HELIX 34 34 ASN B 273 GLY B 285 1 13 HELIX 35 35 GLY B 305 SER B 310 1 6 HELIX 36 36 GLY B 314 SER B 323 1 10 HELIX 37 37 SER B 323 ASN B 331 1 9 SHEET 1 A 3 ILE A 6 ASP A 7 0 SHEET 2 A 3 VAL A 74 ALA A 79 1 O VAL A 74 N ASP A 7 SHEET 3 A 3 HIS A 11 PHE A 12 1 N PHE A 12 O CYS A 78 SHEET 1 B 8 ILE A 6 ASP A 7 0 SHEET 2 B 8 VAL A 74 ALA A 79 1 O VAL A 74 N ASP A 7 SHEET 3 B 8 ILE A 115 ALA A 119 1 O LYS A 116 N GLN A 75 SHEET 4 B 8 GLY A 143 GLY A 147 1 O GLN A 145 N ALA A 119 SHEET 5 B 8 ILE A 174 HIS A 177 1 O HIS A 177 N ILE A 146 SHEET 6 B 8 ILE A 224 PHE A 226 1 O CYS A 225 N VAL A 176 SHEET 7 B 8 PHE A 266 ASP A 268 1 O PHE A 266 N PHE A 226 SHEET 8 B 8 VAL A 289 MET A 290 1 O MET A 290 N VAL A 267 SHEET 1 C 3 PRO A 30 VAL A 34 0 SHEET 2 C 3 THR A 40 MET A 45 -1 O MET A 44 N TRP A 31 SHEET 3 C 3 ASN A 48 TYR A 54 -1 O ASN A 48 N MET A 45 SHEET 1 D 3 ILE B 6 PHE B 12 0 SHEET 2 D 3 VAL B 74 ALA B 79 1 O VAL B 76 N ASP B 7 SHEET 3 D 3 ILE B 115 VAL B 117 1 O LYS B 116 N THR B 77 SHEET 1 E 3 TRP B 31 VAL B 34 0 SHEET 2 E 3 THR B 40 MET B 45 -1 O SER B 42 N GLN B 33 SHEET 3 E 3 ASN B 48 TYR B 54 -1 O ARG B 51 N ILE B 43 SHEET 1 F 5 ILE B 144 GLY B 147 0 SHEET 2 F 5 ILE B 174 HIS B 177 1 O HIS B 177 N ILE B 146 SHEET 3 F 5 ILE B 224 PHE B 226 1 O CYS B 225 N VAL B 176 SHEET 4 F 5 PHE B 266 ASP B 268 1 O PHE B 266 N PHE B 226 SHEET 5 F 5 VAL B 289 MET B 290 1 O MET B 290 N VAL B 267 LINK NE2 HIS A 9 CO CO A 501 1555 1555 2.15 LINK NE2 HIS A 11 CO CO A 501 1555 1555 2.06 LINK NE2 HIS A 177 CO CO A 501 1555 1555 2.29 LINK NE2 HIS A 228 CO CO A 501 1555 1555 2.42 LINK OD2 ASP A 294 CO CO A 501 1555 1555 2.08 LINK CO CO A 501 O HOH A 578 1555 1555 2.19 LINK NE2 HIS B 9 CO CO B 401 1555 1555 2.10 LINK NE2 HIS B 11 CO CO B 401 1555 1555 2.17 LINK NE2 HIS B 177 CO CO B 401 1555 1555 2.23 LINK NE2 HIS B 228 CO CO B 401 1555 1555 2.49 LINK OD1 ASP B 294 CO CO B 401 1555 1555 2.14 CISPEP 1 TYR A 295 PRO A 296 0 8.56 CISPEP 2 TYR B 295 PRO B 296 0 -2.12 SITE 1 AC1 6 HIS B 9 HIS B 11 HIS B 177 HIS B 228 SITE 2 AC1 6 ASP B 294 HOH B 402 SITE 1 AC2 6 HIS A 9 HIS A 11 HIS A 177 HIS A 228 SITE 2 AC2 6 ASP A 294 HOH A 578 CRYST1 91.569 91.569 167.910 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010921 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005956 0.00000