data_2HCZ # _entry.id 2HCZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HCZ pdb_00002hcz 10.2210/pdb2hcz/pdb RCSB RCSB038210 ? ? WWPDB D_1000038210 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1N10 _pdbx_database_related.details 'Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2HCZ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-19 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yennawar, N.H.' 1 'Cosgrove, D.J.' 2 # _citation.id primary _citation.title 'Crystal structure and activities of EXPB1 (Zea m 1), a beta-expansin and group-1 pollen allergen from maize.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 103 _citation.page_first 14664 _citation.page_last 14671 _citation.year 2006 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16984999 _citation.pdbx_database_id_DOI 10.1073/pnas.0605979103 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yennawar, N.H.' 1 ? primary 'Li, L.C.' 2 ? primary 'Dudzinski, D.M.' 3 ? primary 'Tabuchi, A.' 4 ? primary 'Cosgrove, D.J.' 5 ? # _cell.length_a 113.408 _cell.length_b 44.512 _cell.length_c 69.467 _cell.angle_alpha 90.000 _cell.angle_beta 124.640 _cell.angle_gamma 90.000 _cell.entry_id 2HCZ _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 2HCZ _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Beta-expansin 1a' 26934.004 1 ? ? ? ? 2 branched man ;alpha-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-D-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1189.079 1 ? ? ? ? 3 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pollen allergen Zea m 1, Zea m I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPPKVPPG(HYP)NITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEV RCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGC NPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDA VYTSNVQFY ; _entity_poly.pdbx_seq_one_letter_code_can ;GPPKVPPGPNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE KPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNY LAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTS NVQFY ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 PRO n 1 4 LYS n 1 5 VAL n 1 6 PRO n 1 7 PRO n 1 8 GLY n 1 9 HYP n 1 10 ASN n 1 11 ILE n 1 12 THR n 1 13 THR n 1 14 ASN n 1 15 TYR n 1 16 ASN n 1 17 GLY n 1 18 LYS n 1 19 TRP n 1 20 LEU n 1 21 THR n 1 22 ALA n 1 23 ARG n 1 24 ALA n 1 25 THR n 1 26 TRP n 1 27 TYR n 1 28 GLY n 1 29 GLN n 1 30 PRO n 1 31 ASN n 1 32 GLY n 1 33 ALA n 1 34 GLY n 1 35 ALA n 1 36 PRO n 1 37 ASP n 1 38 ASN n 1 39 GLY n 1 40 GLY n 1 41 ALA n 1 42 CYS n 1 43 GLY n 1 44 ILE n 1 45 LYS n 1 46 ASN n 1 47 VAL n 1 48 ASN n 1 49 LEU n 1 50 PRO n 1 51 PRO n 1 52 TYR n 1 53 SER n 1 54 GLY n 1 55 MET n 1 56 THR n 1 57 ALA n 1 58 CYS n 1 59 GLY n 1 60 ASN n 1 61 VAL n 1 62 PRO n 1 63 ILE n 1 64 PHE n 1 65 LYS n 1 66 ASP n 1 67 GLY n 1 68 LYS n 1 69 GLY n 1 70 CYS n 1 71 GLY n 1 72 SER n 1 73 CYS n 1 74 TYR n 1 75 GLU n 1 76 VAL n 1 77 ARG n 1 78 CYS n 1 79 LYS n 1 80 GLU n 1 81 LYS n 1 82 PRO n 1 83 GLU n 1 84 CYS n 1 85 SER n 1 86 GLY n 1 87 ASN n 1 88 PRO n 1 89 VAL n 1 90 THR n 1 91 VAL n 1 92 TYR n 1 93 ILE n 1 94 THR n 1 95 ASP n 1 96 MET n 1 97 ASN n 1 98 TYR n 1 99 GLU n 1 100 PRO n 1 101 ILE n 1 102 ALA n 1 103 PRO n 1 104 TYR n 1 105 HIS n 1 106 PHE n 1 107 ASP n 1 108 LEU n 1 109 SER n 1 110 GLY n 1 111 LYS n 1 112 ALA n 1 113 PHE n 1 114 GLY n 1 115 SER n 1 116 LEU n 1 117 ALA n 1 118 LYS n 1 119 PRO n 1 120 GLY n 1 121 LEU n 1 122 ASN n 1 123 ASP n 1 124 LYS n 1 125 ILE n 1 126 ARG n 1 127 HIS n 1 128 CYS n 1 129 GLY n 1 130 ILE n 1 131 MET n 1 132 ASP n 1 133 VAL n 1 134 GLU n 1 135 PHE n 1 136 ARG n 1 137 ARG n 1 138 VAL n 1 139 ARG n 1 140 CYS n 1 141 LYS n 1 142 TYR n 1 143 PRO n 1 144 ALA n 1 145 GLY n 1 146 GLN n 1 147 LYS n 1 148 ILE n 1 149 VAL n 1 150 PHE n 1 151 HIS n 1 152 ILE n 1 153 GLU n 1 154 LYS n 1 155 GLY n 1 156 CYS n 1 157 ASN n 1 158 PRO n 1 159 ASN n 1 160 TYR n 1 161 LEU n 1 162 ALA n 1 163 VAL n 1 164 LEU n 1 165 VAL n 1 166 LYS n 1 167 TYR n 1 168 VAL n 1 169 ALA n 1 170 ASP n 1 171 ASP n 1 172 GLY n 1 173 ASP n 1 174 ILE n 1 175 VAL n 1 176 LEU n 1 177 MET n 1 178 GLU n 1 179 ILE n 1 180 GLN n 1 181 ASP n 1 182 LYS n 1 183 LEU n 1 184 SER n 1 185 ALA n 1 186 GLU n 1 187 TRP n 1 188 LYS n 1 189 PRO n 1 190 MET n 1 191 LYS n 1 192 LEU n 1 193 SER n 1 194 TRP n 1 195 GLY n 1 196 ALA n 1 197 ILE n 1 198 TRP n 1 199 ARG n 1 200 MET n 1 201 ASP n 1 202 THR n 1 203 ALA n 1 204 LYS n 1 205 ALA n 1 206 LEU n 1 207 LYS n 1 208 GLY n 1 209 PRO n 1 210 PHE n 1 211 SER n 1 212 ILE n 1 213 ARG n 1 214 LEU n 1 215 THR n 1 216 SER n 1 217 GLU n 1 218 SER n 1 219 GLY n 1 220 LYS n 1 221 LYS n 1 222 VAL n 1 223 ILE n 1 224 ALA n 1 225 LYS n 1 226 ASP n 1 227 VAL n 1 228 ILE n 1 229 PRO n 1 230 ALA n 1 231 ASN n 1 232 TRP n 1 233 ARG n 1 234 PRO n 1 235 ASP n 1 236 ALA n 1 237 VAL n 1 238 TYR n 1 239 THR n 1 240 SER n 1 241 ASN n 1 242 VAL n 1 243 GLN n 1 244 PHE n 1 245 TYR n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Zea mays' _entity_src_nat.pdbx_ncbi_taxonomy_id 4577 _entity_src_nat.genus Zea _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue pollen _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EXB1A_MAIZE _struct_ref.pdbx_db_accession P58738 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPPKVPPGPNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE KPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNY LAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTS NVQFY ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HCZ _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P58738 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 269 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 245 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2HCZ _struct_ref_seq_dif.mon_id HYP _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 9 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P58738 _struct_ref_seq_dif.db_mon_id PRO _struct_ref_seq_dif.pdbx_seq_db_seq_num 33 _struct_ref_seq_dif.details 'modified residue' _struct_ref_seq_dif.pdbx_auth_seq_num 9 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FCA 'D-saccharide, alpha linking' . alpha-D-fucopyranose 'alpha-D-fucose; 6-deoxy-alpha-D-galactopyranose; D-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYS 'D-saccharide, alpha linking' . alpha-D-xylopyranose 'alpha-D-xylose; D-xylose; xylose; XYLOPYRANOSE' 'C5 H10 O5' 150.130 # _exptl.crystals_number 2 _exptl.entry_id 2HCZ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '15% PEG 4000, 50mM Sodium Acetate and 0.1M Ammonium Sulphate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1998-10-01 _diffrn_detector.details Graphite # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2HCZ _reflns.d_resolution_high 2.750 _reflns.d_resolution_low 100.000 _reflns.number_obs 7013 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_netI_over_sigmaI 7.300 _reflns.pdbx_chi_squared 0.958 _reflns.percent_possible_obs 93.100 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.number_all 7531 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.85 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.402 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.212 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 705 _reflns_shell.percent_possible_all 96.60 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HCZ _refine.ls_d_res_high 2.750 _refine.ls_d_res_low 29.63 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 92.100 _refine.ls_number_reflns_obs 7007 _refine.ls_R_factor_R_work 0.233 _refine.ls_R_factor_R_free 0.29 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 367 _refine.B_iso_mean 56.865 _refine.solvent_model_param_bsol 46.183 _refine.aniso_B[1][1] -1.640 _refine.aniso_B[2][2] -4.798 _refine.aniso_B[3][3] 6.439 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -1.449 _refine.aniso_B[2][3] 0.000 _refine.overall_FOM_work_R_set 0.699 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 7531 _refine.ls_R_factor_all 0.233 _refine.ls_R_factor_obs 0.233 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1N10 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1872 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 80 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 1969 _refine_hist.d_res_high 2.750 _refine_hist.d_res_low 29.63 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.65 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.750 2.870 8 . 780 . 0.42 0.545 . 41 . . 821 . 'X-RAY DIFFRACTION' 2.870 3.030 8 . 860 . 0.368 0.378 . 50 . . 910 . 'X-RAY DIFFRACTION' 3.030 3.220 8 . 850 . 0.331 0.397 . 47 . . 897 . 'X-RAY DIFFRACTION' 3.220 3.460 8 . 836 . 0.262 0.33 . 56 . . 892 . 'X-RAY DIFFRACTION' 3.460 3.810 8 . 860 . 0.213 0.322 . 40 . . 900 . 'X-RAY DIFFRACTION' 3.810 4.360 8 . 856 . 0.216 0.245 . 39 . . 895 . 'X-RAY DIFFRACTION' 4.360 5.480 8 . 779 . 0.16 0.205 . 55 . . 834 . 'X-RAY DIFFRACTION' 5.480 25.000 8 . 813 . 0.192 0.274 . 38 . . 851 . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param ? 'X-RAY DIFFRACTION' 2 carbohydrate.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2HCZ _struct.title 'Crystal structure of EXPB1 (Zea m 1), a beta-expansin and group-1 pollen allergen from maize' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HCZ _struct_keywords.pdbx_keywords ALLERGEN _struct_keywords.text 'Domain 1 is a beta barrel and Domain 2 is a immunoglobulin like beta-sandwich, ALLERGEN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 60 ? LYS A 65 ? ASN X 60 LYS X 65 1 ? 6 HELX_P HELX_P2 2 ASP A 66 ? LYS A 68 ? ASP X 66 LYS X 68 5 ? 3 HELX_P HELX_P3 3 SER A 109 ? LEU A 116 ? SER X 109 LEU X 116 1 ? 8 HELX_P HELX_P4 4 LEU A 121 ? ARG A 126 ? LEU X 121 ARG X 126 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 42 SG ? ? ? 1_555 A CYS 70 SG ? ? X CYS 42 X CYS 70 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 140 SG ? ? X CYS 73 X CYS 140 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf3 disulf ? ? A CYS 78 SG ? ? ? 1_555 A CYS 84 SG ? ? X CYS 78 X CYS 84 1_555 ? ? ? ? ? ? ? 2.022 ? ? covale1 covale both ? A GLY 8 C ? ? ? 1_555 A HYP 9 N ? ? X GLY 8 X HYP 9 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A HYP 9 C ? ? ? 1_555 A ASN 10 N ? ? X HYP 9 X ASN 10 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale3 covale one ? A ASN 10 ND2 ? ? ? 1_555 B NAG . C1 ? ? X ASN 10 A NAG 1 1_555 ? ? ? ? ? ? ? 1.471 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale5 covale both ? B NAG . O3 ? ? ? 1_555 B FCA . C1 ? ? A NAG 1 A FCA 7 1_555 ? ? ? ? ? ? ? 1.730 ? ? covale6 covale both ? B NAG . O4 ? ? ? 1_555 B MAN . C1 ? ? A NAG 2 A MAN 3 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale7 covale both ? B MAN . O2 ? ? ? 1_555 B XYS . C1 ? ? A MAN 3 A XYS 4 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale8 covale both ? B MAN . O3 ? ? ? 1_555 B MAN . C1 ? ? A MAN 3 A MAN 5 1_555 ? ? ? ? ? ? ? 1.408 ? ? covale9 covale both ? B MAN . O6 ? ? ? 1_555 B MAN . C1 ? ? A MAN 3 A MAN 6 1_555 ? ? ? ? ? ? ? 1.558 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 50 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 50 _struct_mon_prot_cis.auth_asym_id X _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 51 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 51 _struct_mon_prot_cis.pdbx_auth_asym_id_2 X _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.15 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 20 ? TRP A 26 ? LEU X 20 TRP X 26 A 2 HIS A 105 ? LEU A 108 ? HIS X 105 LEU X 108 A 3 THR A 56 ? GLY A 59 ? THR X 56 GLY X 59 A 4 VAL A 89 ? MET A 96 ? VAL X 89 MET X 96 A 5 CYS A 73 ? ARG A 77 ? CYS X 73 ARG X 77 A 6 MET A 131 ? VAL A 138 ? MET X 131 VAL X 138 A 7 LEU A 20 ? TRP A 26 ? LEU X 20 TRP X 26 B 1 LYS A 191 ? TRP A 194 ? LYS X 191 TRP X 194 B 2 ILE A 197 ? ARG A 199 ? ILE X 197 ARG X 199 B 3 VAL A 163 ? LYS A 166 ? VAL X 163 LYS X 166 B 4 VAL A 149 ? ILE A 152 ? VAL X 149 ILE X 152 B 5 VAL A 237 ? THR A 239 ? VAL X 237 THR X 239 C 1 ILE A 174 ? GLU A 178 ? ILE X 174 GLU X 178 C 2 ILE A 212 ? SER A 216 ? ILE X 212 SER X 216 C 3 LYS A 221 ? ALA A 224 ? LYS X 221 ALA X 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 25 ? N THR X 25 O LEU A 108 ? O LEU X 108 A 2 3 O ASP A 107 ? O ASP X 107 N CYS A 58 ? N CYS X 58 A 3 4 N ALA A 57 ? N ALA X 57 O ASP A 95 ? O ASP X 95 A 4 5 O VAL A 89 ? O VAL X 89 N VAL A 76 ? N VAL X 76 A 5 6 N ARG A 77 ? N ARG X 77 O GLU A 134 ? O GLU X 134 A 6 7 O MET A 131 ? O MET X 131 N ALA A 24 ? N ALA X 24 B 1 2 N LYS A 191 ? N LYS X 191 O ARG A 199 ? O ARG X 199 B 2 3 O TRP A 198 ? O TRP X 198 N VAL A 163 ? N VAL X 163 B 3 4 O LEU A 164 ? O LEU X 164 N HIS A 151 ? N HIS X 151 B 4 5 N PHE A 150 ? N PHE X 150 O TYR A 238 ? O TYR X 238 C 1 2 N GLU A 178 ? N GLU X 178 O ARG A 213 ? O ARG X 213 C 2 3 N ILE A 212 ? N ILE X 212 O ALA A 224 ? O ALA X 224 # _atom_sites.entry_id 2HCZ _atom_sites.fract_transf_matrix[1][1] 0.008818 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006092 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022466 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017497 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'FCA A 7 HAS WRONG CHIRALITY AT ATOM C2' 2 'FCA A 7 HAS WRONG CHIRALITY AT ATOM C3' 3 'FCA A 7 HAS WRONG CHIRALITY AT ATOM C4' 4 'FCA A 7 HAS WRONG CHIRALITY AT ATOM C5' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? X . n A 1 2 PRO 2 2 ? ? ? X . n A 1 3 PRO 3 3 ? ? ? X . n A 1 4 LYS 4 4 4 LYS LYS X . n A 1 5 VAL 5 5 5 VAL VAL X . n A 1 6 PRO 6 6 6 PRO PRO X . n A 1 7 PRO 7 7 7 PRO PRO X . n A 1 8 GLY 8 8 8 GLY GLY X . n A 1 9 HYP 9 9 9 HYP HYP X . n A 1 10 ASN 10 10 10 ASN ASN X . n A 1 11 ILE 11 11 11 ILE ILE X . n A 1 12 THR 12 12 12 THR THR X . n A 1 13 THR 13 13 13 THR THR X . n A 1 14 ASN 14 14 14 ASN ASN X . n A 1 15 TYR 15 15 15 TYR TYR X . n A 1 16 ASN 16 16 16 ASN ASN X . n A 1 17 GLY 17 17 17 GLY GLY X . n A 1 18 LYS 18 18 18 LYS LYS X . n A 1 19 TRP 19 19 19 TRP TRP X . n A 1 20 LEU 20 20 20 LEU LEU X . n A 1 21 THR 21 21 21 THR THR X . n A 1 22 ALA 22 22 22 ALA ALA X . n A 1 23 ARG 23 23 23 ARG ARG X . n A 1 24 ALA 24 24 24 ALA ALA X . n A 1 25 THR 25 25 25 THR THR X . n A 1 26 TRP 26 26 26 TRP TRP X . n A 1 27 TYR 27 27 27 TYR TYR X . n A 1 28 GLY 28 28 28 GLY GLY X . n A 1 29 GLN 29 29 29 GLN GLN X . n A 1 30 PRO 30 30 30 PRO PRO X . n A 1 31 ASN 31 31 31 ASN ASN X . n A 1 32 GLY 32 32 32 GLY GLY X . n A 1 33 ALA 33 33 33 ALA ALA X . n A 1 34 GLY 34 34 34 GLY GLY X . n A 1 35 ALA 35 35 35 ALA ALA X . n A 1 36 PRO 36 36 36 PRO PRO X . n A 1 37 ASP 37 37 37 ASP ASP X . n A 1 38 ASN 38 38 38 ASN ASN X . n A 1 39 GLY 39 39 39 GLY GLY X . n A 1 40 GLY 40 40 40 GLY GLY X . n A 1 41 ALA 41 41 41 ALA ALA X . n A 1 42 CYS 42 42 42 CYS CYS X . n A 1 43 GLY 43 43 43 GLY GLY X . n A 1 44 ILE 44 44 44 ILE ILE X . n A 1 45 LYS 45 45 45 LYS LYS X . n A 1 46 ASN 46 46 46 ASN ASN X . n A 1 47 VAL 47 47 47 VAL VAL X . n A 1 48 ASN 48 48 48 ASN ASN X . n A 1 49 LEU 49 49 49 LEU LEU X . n A 1 50 PRO 50 50 50 PRO PRO X . n A 1 51 PRO 51 51 51 PRO PRO X . n A 1 52 TYR 52 52 52 TYR TYR X . n A 1 53 SER 53 53 53 SER SER X . n A 1 54 GLY 54 54 54 GLY GLY X . n A 1 55 MET 55 55 55 MET MET X . n A 1 56 THR 56 56 56 THR THR X . n A 1 57 ALA 57 57 57 ALA ALA X . n A 1 58 CYS 58 58 58 CYS CYS X . n A 1 59 GLY 59 59 59 GLY GLY X . n A 1 60 ASN 60 60 60 ASN ASN X . n A 1 61 VAL 61 61 61 VAL VAL X . n A 1 62 PRO 62 62 62 PRO PRO X . n A 1 63 ILE 63 63 63 ILE ILE X . n A 1 64 PHE 64 64 64 PHE PHE X . n A 1 65 LYS 65 65 65 LYS LYS X . n A 1 66 ASP 66 66 66 ASP ASP X . n A 1 67 GLY 67 67 67 GLY GLY X . n A 1 68 LYS 68 68 68 LYS LYS X . n A 1 69 GLY 69 69 69 GLY GLY X . n A 1 70 CYS 70 70 70 CYS CYS X . n A 1 71 GLY 71 71 71 GLY GLY X . n A 1 72 SER 72 72 72 SER SER X . n A 1 73 CYS 73 73 73 CYS CYS X . n A 1 74 TYR 74 74 74 TYR TYR X . n A 1 75 GLU 75 75 75 GLU GLU X . n A 1 76 VAL 76 76 76 VAL VAL X . n A 1 77 ARG 77 77 77 ARG ARG X . n A 1 78 CYS 78 78 78 CYS CYS X . n A 1 79 LYS 79 79 79 LYS LYS X . n A 1 80 GLU 80 80 80 GLU GLU X . n A 1 81 LYS 81 81 81 LYS LYS X . n A 1 82 PRO 82 82 82 PRO PRO X . n A 1 83 GLU 83 83 83 GLU GLU X . n A 1 84 CYS 84 84 84 CYS CYS X . n A 1 85 SER 85 85 85 SER SER X . n A 1 86 GLY 86 86 86 GLY GLY X . n A 1 87 ASN 87 87 87 ASN ASN X . n A 1 88 PRO 88 88 88 PRO PRO X . n A 1 89 VAL 89 89 89 VAL VAL X . n A 1 90 THR 90 90 90 THR THR X . n A 1 91 VAL 91 91 91 VAL VAL X . n A 1 92 TYR 92 92 92 TYR TYR X . n A 1 93 ILE 93 93 93 ILE ILE X . n A 1 94 THR 94 94 94 THR THR X . n A 1 95 ASP 95 95 95 ASP ASP X . n A 1 96 MET 96 96 96 MET MET X . n A 1 97 ASN 97 97 97 ASN ASN X . n A 1 98 TYR 98 98 98 TYR TYR X . n A 1 99 GLU 99 99 99 GLU GLU X . n A 1 100 PRO 100 100 100 PRO PRO X . n A 1 101 ILE 101 101 101 ILE ILE X . n A 1 102 ALA 102 102 102 ALA ALA X . n A 1 103 PRO 103 103 103 PRO PRO X . n A 1 104 TYR 104 104 104 TYR TYR X . n A 1 105 HIS 105 105 105 HIS HIS X . n A 1 106 PHE 106 106 106 PHE PHE X . n A 1 107 ASP 107 107 107 ASP ASP X . n A 1 108 LEU 108 108 108 LEU LEU X . n A 1 109 SER 109 109 109 SER SER X . n A 1 110 GLY 110 110 110 GLY GLY X . n A 1 111 LYS 111 111 111 LYS LYS X . n A 1 112 ALA 112 112 112 ALA ALA X . n A 1 113 PHE 113 113 113 PHE PHE X . n A 1 114 GLY 114 114 114 GLY GLY X . n A 1 115 SER 115 115 115 SER SER X . n A 1 116 LEU 116 116 116 LEU LEU X . n A 1 117 ALA 117 117 117 ALA ALA X . n A 1 118 LYS 118 118 118 LYS LYS X . n A 1 119 PRO 119 119 119 PRO PRO X . n A 1 120 GLY 120 120 120 GLY GLY X . n A 1 121 LEU 121 121 121 LEU LEU X . n A 1 122 ASN 122 122 122 ASN ASN X . n A 1 123 ASP 123 123 123 ASP ASP X . n A 1 124 LYS 124 124 124 LYS LYS X . n A 1 125 ILE 125 125 125 ILE ILE X . n A 1 126 ARG 126 126 126 ARG ARG X . n A 1 127 HIS 127 127 127 HIS HIS X . n A 1 128 CYS 128 128 128 CYS CYS X . n A 1 129 GLY 129 129 129 GLY GLY X . n A 1 130 ILE 130 130 130 ILE ILE X . n A 1 131 MET 131 131 131 MET MET X . n A 1 132 ASP 132 132 132 ASP ASP X . n A 1 133 VAL 133 133 133 VAL VAL X . n A 1 134 GLU 134 134 134 GLU GLU X . n A 1 135 PHE 135 135 135 PHE PHE X . n A 1 136 ARG 136 136 136 ARG ARG X . n A 1 137 ARG 137 137 137 ARG ARG X . n A 1 138 VAL 138 138 138 VAL VAL X . n A 1 139 ARG 139 139 139 ARG ARG X . n A 1 140 CYS 140 140 140 CYS CYS X . n A 1 141 LYS 141 141 141 LYS LYS X . n A 1 142 TYR 142 142 142 TYR TYR X . n A 1 143 PRO 143 143 143 PRO PRO X . n A 1 144 ALA 144 144 144 ALA ALA X . n A 1 145 GLY 145 145 145 GLY GLY X . n A 1 146 GLN 146 146 146 GLN GLN X . n A 1 147 LYS 147 147 147 LYS LYS X . n A 1 148 ILE 148 148 148 ILE ILE X . n A 1 149 VAL 149 149 149 VAL VAL X . n A 1 150 PHE 150 150 150 PHE PHE X . n A 1 151 HIS 151 151 151 HIS HIS X . n A 1 152 ILE 152 152 152 ILE ILE X . n A 1 153 GLU 153 153 153 GLU GLU X . n A 1 154 LYS 154 154 154 LYS LYS X . n A 1 155 GLY 155 155 155 GLY GLY X . n A 1 156 CYS 156 156 156 CYS CYS X . n A 1 157 ASN 157 157 157 ASN ASN X . n A 1 158 PRO 158 158 158 PRO PRO X . n A 1 159 ASN 159 159 159 ASN ASN X . n A 1 160 TYR 160 160 160 TYR TYR X . n A 1 161 LEU 161 161 161 LEU LEU X . n A 1 162 ALA 162 162 162 ALA ALA X . n A 1 163 VAL 163 163 163 VAL VAL X . n A 1 164 LEU 164 164 164 LEU LEU X . n A 1 165 VAL 165 165 165 VAL VAL X . n A 1 166 LYS 166 166 166 LYS LYS X . n A 1 167 TYR 167 167 167 TYR TYR X . n A 1 168 VAL 168 168 168 VAL VAL X . n A 1 169 ALA 169 169 169 ALA ALA X . n A 1 170 ASP 170 170 170 ASP ASP X . n A 1 171 ASP 171 171 171 ASP ASP X . n A 1 172 GLY 172 172 172 GLY GLY X . n A 1 173 ASP 173 173 173 ASP ASP X . n A 1 174 ILE 174 174 174 ILE ILE X . n A 1 175 VAL 175 175 175 VAL VAL X . n A 1 176 LEU 176 176 176 LEU LEU X . n A 1 177 MET 177 177 177 MET MET X . n A 1 178 GLU 178 178 178 GLU GLU X . n A 1 179 ILE 179 179 179 ILE ILE X . n A 1 180 GLN 180 180 180 GLN GLN X . n A 1 181 ASP 181 181 181 ASP ASP X . n A 1 182 LYS 182 182 182 LYS LYS X . n A 1 183 LEU 183 183 183 LEU LEU X . n A 1 184 SER 184 184 184 SER SER X . n A 1 185 ALA 185 185 185 ALA ALA X . n A 1 186 GLU 186 186 186 GLU GLU X . n A 1 187 TRP 187 187 187 TRP TRP X . n A 1 188 LYS 188 188 188 LYS LYS X . n A 1 189 PRO 189 189 189 PRO PRO X . n A 1 190 MET 190 190 190 MET MET X . n A 1 191 LYS 191 191 191 LYS LYS X . n A 1 192 LEU 192 192 192 LEU LEU X . n A 1 193 SER 193 193 193 SER SER X . n A 1 194 TRP 194 194 194 TRP TRP X . n A 1 195 GLY 195 195 195 GLY GLY X . n A 1 196 ALA 196 196 196 ALA ALA X . n A 1 197 ILE 197 197 197 ILE ILE X . n A 1 198 TRP 198 198 198 TRP TRP X . n A 1 199 ARG 199 199 199 ARG ARG X . n A 1 200 MET 200 200 200 MET MET X . n A 1 201 ASP 201 201 201 ASP ASP X . n A 1 202 THR 202 202 202 THR THR X . n A 1 203 ALA 203 203 203 ALA ALA X . n A 1 204 LYS 204 204 204 LYS LYS X . n A 1 205 ALA 205 205 205 ALA ALA X . n A 1 206 LEU 206 206 206 LEU LEU X . n A 1 207 LYS 207 207 207 LYS LYS X . n A 1 208 GLY 208 208 208 GLY GLY X . n A 1 209 PRO 209 209 209 PRO PRO X . n A 1 210 PHE 210 210 210 PHE PHE X . n A 1 211 SER 211 211 211 SER SER X . n A 1 212 ILE 212 212 212 ILE ILE X . n A 1 213 ARG 213 213 213 ARG ARG X . n A 1 214 LEU 214 214 214 LEU LEU X . n A 1 215 THR 215 215 215 THR THR X . n A 1 216 SER 216 216 216 SER SER X . n A 1 217 GLU 217 217 217 GLU GLU X . n A 1 218 SER 218 218 218 SER SER X . n A 1 219 GLY 219 219 219 GLY GLY X . n A 1 220 LYS 220 220 220 LYS LYS X . n A 1 221 LYS 221 221 221 LYS LYS X . n A 1 222 VAL 222 222 222 VAL VAL X . n A 1 223 ILE 223 223 223 ILE ILE X . n A 1 224 ALA 224 224 224 ALA ALA X . n A 1 225 LYS 225 225 225 LYS LYS X . n A 1 226 ASP 226 226 226 ASP ASP X . n A 1 227 VAL 227 227 227 VAL VAL X . n A 1 228 ILE 228 228 228 ILE ILE X . n A 1 229 PRO 229 229 229 PRO PRO X . n A 1 230 ALA 230 230 230 ALA ALA X . n A 1 231 ASN 231 231 231 ASN ASN X . n A 1 232 TRP 232 232 232 TRP TRP X . n A 1 233 ARG 233 233 233 ARG ARG X . n A 1 234 PRO 234 234 234 PRO PRO X . n A 1 235 ASP 235 235 235 ASP ASP X . n A 1 236 ALA 236 236 236 ALA ALA X . n A 1 237 VAL 237 237 237 VAL VAL X . n A 1 238 TYR 238 238 238 TYR TYR X . n A 1 239 THR 239 239 239 THR THR X . n A 1 240 SER 240 240 240 SER SER X . n A 1 241 ASN 241 241 241 ASN ASN X . n A 1 242 VAL 242 242 242 VAL VAL X . n A 1 243 GLN 243 243 243 GLN GLN X . n A 1 244 PHE 244 244 244 PHE PHE X . n A 1 245 TYR 245 245 245 TYR TYR X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 253 1 HOH TIP X . C 3 HOH 2 254 2 HOH TIP X . C 3 HOH 3 255 3 HOH TIP X . C 3 HOH 4 256 4 HOH TIP X . C 3 HOH 5 257 5 HOH TIP X . C 3 HOH 6 258 6 HOH TIP X . C 3 HOH 7 259 7 HOH TIP X . C 3 HOH 8 260 8 HOH TIP X . C 3 HOH 9 261 9 HOH TIP X . C 3 HOH 10 262 10 HOH TIP X . C 3 HOH 11 263 11 HOH TIP X . C 3 HOH 12 264 12 HOH TIP X . C 3 HOH 13 265 13 HOH TIP X . C 3 HOH 14 266 14 HOH TIP X . C 3 HOH 15 267 15 HOH TIP X . C 3 HOH 16 268 16 HOH TIP X . C 3 HOH 17 269 17 HOH TIP X . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 10 X ASN 10 ? ASN 'GLYCOSYLATION SITE' 2 A HYP 9 X HYP 9 ? PRO 4-HYDROXYPROLINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-08-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Refinement description' 14 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' database_PDB_caveat 5 5 'Structure model' entity 6 5 'Structure model' pdbx_branch_scheme 7 5 'Structure model' pdbx_chem_comp_identifier 8 5 'Structure model' pdbx_entity_branch 9 5 'Structure model' pdbx_entity_branch_descriptor 10 5 'Structure model' pdbx_entity_branch_link 11 5 'Structure model' pdbx_entity_branch_list 12 5 'Structure model' pdbx_entity_nonpoly 13 5 'Structure model' pdbx_nonpoly_scheme 14 5 'Structure model' pdbx_struct_assembly_gen 15 5 'Structure model' pdbx_validate_chiral 16 5 'Structure model' pdbx_validate_close_contact 17 5 'Structure model' struct_asym 18 5 'Structure model' struct_conn 19 5 'Structure model' struct_ref_seq_dif 20 5 'Structure model' struct_site 21 5 'Structure model' struct_site_gen 22 6 'Structure model' chem_comp 23 6 'Structure model' chem_comp_atom 24 6 'Structure model' chem_comp_bond 25 6 'Structure model' database_2 26 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_atom_site.B_iso_or_equiv' 11 5 'Structure model' '_atom_site.Cartn_x' 12 5 'Structure model' '_atom_site.Cartn_y' 13 5 'Structure model' '_atom_site.Cartn_z' 14 5 'Structure model' '_atom_site.auth_asym_id' 15 5 'Structure model' '_atom_site.auth_atom_id' 16 5 'Structure model' '_atom_site.auth_comp_id' 17 5 'Structure model' '_atom_site.auth_seq_id' 18 5 'Structure model' '_atom_site.label_asym_id' 19 5 'Structure model' '_atom_site.label_atom_id' 20 5 'Structure model' '_atom_site.label_comp_id' 21 5 'Structure model' '_atom_site.label_entity_id' 22 5 'Structure model' '_atom_site.type_symbol' 23 5 'Structure model' '_chem_comp.name' 24 5 'Structure model' '_chem_comp.type' 25 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 26 5 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 27 5 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 28 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 29 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 30 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 31 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 32 5 'Structure model' '_struct_conn.pdbx_dist_value' 33 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 34 5 'Structure model' '_struct_conn.pdbx_role' 35 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 36 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 37 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 38 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 39 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 40 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 41 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 42 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 43 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 44 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 45 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 46 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 47 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 48 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 49 5 'Structure model' '_struct_ref_seq_dif.details' 50 6 'Structure model' '_chem_comp.pdbx_synonyms' 51 6 'Structure model' '_database_2.pdbx_DOI' 52 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 2HCZ _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 0.514 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.478 _pdbx_phasing_MR.correlation_coeff_Io_to_Ic 0.263 _pdbx_phasing_MR.d_res_high_rotation 2.750 _pdbx_phasing_MR.d_res_low_rotation 56.796 _pdbx_phasing_MR.d_res_high_translation 2.750 _pdbx_phasing_MR.d_res_low_translation 56.796 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _pdbx_phasing_dm.entry_id 2HCZ _pdbx_phasing_dm.method 'Solvent flattening and Histogram matching' _pdbx_phasing_dm.reflns 6886 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 6.450 100.000 46.500 ? ? ? 0.734 ? ? 503 5.080 6.450 45.200 ? ? ? 0.747 ? ? 501 4.470 5.080 37.400 ? ? ? 0.807 ? ? 503 4.090 4.470 34.400 ? ? ? 0.832 ? ? 507 3.810 4.090 37.900 ? ? ? 0.796 ? ? 501 3.600 3.810 31.300 ? ? ? 0.827 ? ? 502 3.430 3.600 34.100 ? ? ? 0.822 ? ? 503 3.290 3.430 38.900 ? ? ? 0.816 ? ? 501 3.160 3.290 37.900 ? ? ? 0.800 ? ? 504 3.060 3.160 37.600 ? ? ? 0.775 ? ? 507 2.960 3.060 40.200 ? ? ? 0.761 ? ? 504 2.880 2.960 47.300 ? ? ? 0.768 ? ? 509 2.750 2.880 47.500 ? ? ? 0.745 ? ? 841 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 AMoRE . ? program 'Jorge Navaza' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 DM 4.1 ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 CrystalClear '(MSC/RIGAKU)' ? ? ? ? 'data reduction' ? ? ? 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C3 A NAG 1 ? ? C1 A FCA 7 ? ? 2.10 2 1 O6 A MAN 3 ? ? C2 A MAN 6 ? ? 2.11 3 1 O X ASN 16 ? ? N X LYS 18 ? ? 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 O _pdbx_validate_rmsd_angle.auth_asym_id_1 X _pdbx_validate_rmsd_angle.auth_comp_id_1 HYP _pdbx_validate_rmsd_angle.auth_seq_id_1 9 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 X _pdbx_validate_rmsd_angle.auth_comp_id_2 HYP _pdbx_validate_rmsd_angle.auth_seq_id_2 9 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 X _pdbx_validate_rmsd_angle.auth_comp_id_3 ASN _pdbx_validate_rmsd_angle.auth_seq_id_3 10 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.96 _pdbx_validate_rmsd_angle.angle_target_value 122.70 _pdbx_validate_rmsd_angle.angle_deviation -11.74 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HYP X 9 ? ? -60.50 -123.28 2 1 ASN X 10 ? ? 138.93 113.05 3 1 ASN X 16 ? ? -91.63 55.76 4 1 ALA X 33 ? ? -102.72 45.61 5 1 ASN X 46 ? ? 80.25 18.21 6 1 VAL X 47 ? ? -50.35 -3.06 7 1 MET X 55 ? ? -96.60 50.50 8 1 ASN X 60 ? ? -70.13 -163.24 9 1 ASP X 66 ? ? 28.90 36.02 10 1 SER X 72 ? ? -45.86 157.31 11 1 LYS X 79 ? ? -152.74 27.52 12 1 GLU X 80 ? ? -101.21 -65.64 13 1 PRO X 82 ? ? -50.04 -160.57 14 1 GLU X 83 ? ? 38.31 19.64 15 1 SER X 85 ? ? -37.31 -31.22 16 1 ASN X 97 ? ? -163.90 109.32 17 1 ASN X 122 ? ? -42.25 -91.21 18 1 ASP X 123 ? ? -37.67 -30.66 19 1 HIS X 127 ? ? -105.15 58.27 20 1 CYS X 156 ? ? -158.76 -117.96 21 1 PRO X 158 ? ? -24.97 95.15 22 1 ASN X 159 ? ? 51.24 92.34 23 1 LEU X 161 ? ? 49.38 -142.01 24 1 ALA X 162 ? ? 121.14 111.35 25 1 ASP X 170 ? ? 81.46 -97.85 26 1 LEU X 176 ? ? 177.90 132.19 27 1 GLN X 180 ? ? 176.20 115.34 28 1 LYS X 182 ? ? -61.46 97.90 29 1 LEU X 183 ? ? 92.22 127.07 30 1 SER X 184 ? ? 96.29 37.42 31 1 GLU X 186 ? ? 156.87 1.86 32 1 TRP X 187 ? ? 51.85 93.99 33 1 PRO X 189 ? ? -52.05 -164.85 34 1 TRP X 194 ? ? -174.83 144.26 35 1 ALA X 203 ? ? -155.82 6.32 36 1 LEU X 206 ? ? -46.51 96.73 37 1 LYS X 225 ? ? -62.75 -71.26 38 1 ASP X 226 ? ? -83.61 -89.19 39 1 VAL X 227 ? ? 45.89 6.75 40 1 ILE X 228 ? ? -158.57 89.60 41 1 PRO X 229 ? ? -55.17 -75.67 42 1 ALA X 230 ? ? 165.70 -39.45 43 1 ASN X 231 ? ? -79.40 28.64 44 1 ASP X 235 ? ? 82.08 -22.99 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLY X 8 ? ? HYP X 9 ? ? 60.63 2 1 HYP X 9 ? ? ASN X 10 ? ? -64.54 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id HYP _pdbx_validate_main_chain_plane.auth_asym_id X _pdbx_validate_main_chain_plane.auth_seq_id 9 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 27.92 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A FCA 7 ? 'WRONG HAND' . 2 1 C3 ? A FCA 7 ? 'WRONG HAND' . 3 1 C4 ? A FCA 7 ? 'WRONG HAND' . 4 1 C5 ? A FCA 7 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X GLY 1 ? A GLY 1 2 1 Y 1 X PRO 2 ? A PRO 2 3 1 Y 1 X PRO 3 ? A PRO 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FCA C1 C N S 88 FCA C2 C N R 89 FCA C3 C N S 90 FCA C4 C N R 91 FCA C5 C N R 92 FCA C6 C N N 93 FCA O1 O N N 94 FCA O2 O N N 95 FCA O3 O N N 96 FCA O4 O N N 97 FCA O5 O N N 98 FCA H1 H N N 99 FCA H2 H N N 100 FCA H3 H N N 101 FCA H4 H N N 102 FCA H5 H N N 103 FCA H61 H N N 104 FCA H62 H N N 105 FCA H63 H N N 106 FCA HO1 H N N 107 FCA HO2 H N N 108 FCA HO3 H N N 109 FCA HO4 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 HYP N N N N 184 HYP CA C N S 185 HYP C C N N 186 HYP O O N N 187 HYP CB C N N 188 HYP CG C N R 189 HYP CD C N N 190 HYP OD1 O N N 191 HYP OXT O N N 192 HYP H H N N 193 HYP HA H N N 194 HYP HB2 H N N 195 HYP HB3 H N N 196 HYP HG H N N 197 HYP HD22 H N N 198 HYP HD23 H N N 199 HYP HD1 H N N 200 HYP HXT H N N 201 ILE N N N N 202 ILE CA C N S 203 ILE C C N N 204 ILE O O N N 205 ILE CB C N S 206 ILE CG1 C N N 207 ILE CG2 C N N 208 ILE CD1 C N N 209 ILE OXT O N N 210 ILE H H N N 211 ILE H2 H N N 212 ILE HA H N N 213 ILE HB H N N 214 ILE HG12 H N N 215 ILE HG13 H N N 216 ILE HG21 H N N 217 ILE HG22 H N N 218 ILE HG23 H N N 219 ILE HD11 H N N 220 ILE HD12 H N N 221 ILE HD13 H N N 222 ILE HXT H N N 223 LEU N N N N 224 LEU CA C N S 225 LEU C C N N 226 LEU O O N N 227 LEU CB C N N 228 LEU CG C N N 229 LEU CD1 C N N 230 LEU CD2 C N N 231 LEU OXT O N N 232 LEU H H N N 233 LEU H2 H N N 234 LEU HA H N N 235 LEU HB2 H N N 236 LEU HB3 H N N 237 LEU HG H N N 238 LEU HD11 H N N 239 LEU HD12 H N N 240 LEU HD13 H N N 241 LEU HD21 H N N 242 LEU HD22 H N N 243 LEU HD23 H N N 244 LEU HXT H N N 245 LYS N N N N 246 LYS CA C N S 247 LYS C C N N 248 LYS O O N N 249 LYS CB C N N 250 LYS CG C N N 251 LYS CD C N N 252 LYS CE C N N 253 LYS NZ N N N 254 LYS OXT O N N 255 LYS H H N N 256 LYS H2 H N N 257 LYS HA H N N 258 LYS HB2 H N N 259 LYS HB3 H N N 260 LYS HG2 H N N 261 LYS HG3 H N N 262 LYS HD2 H N N 263 LYS HD3 H N N 264 LYS HE2 H N N 265 LYS HE3 H N N 266 LYS HZ1 H N N 267 LYS HZ2 H N N 268 LYS HZ3 H N N 269 LYS HXT H N N 270 MAN C1 C N S 271 MAN C2 C N S 272 MAN C3 C N S 273 MAN C4 C N S 274 MAN C5 C N R 275 MAN C6 C N N 276 MAN O1 O N N 277 MAN O2 O N N 278 MAN O3 O N N 279 MAN O4 O N N 280 MAN O5 O N N 281 MAN O6 O N N 282 MAN H1 H N N 283 MAN H2 H N N 284 MAN H3 H N N 285 MAN H4 H N N 286 MAN H5 H N N 287 MAN H61 H N N 288 MAN H62 H N N 289 MAN HO1 H N N 290 MAN HO2 H N N 291 MAN HO3 H N N 292 MAN HO4 H N N 293 MAN HO6 H N N 294 MET N N N N 295 MET CA C N S 296 MET C C N N 297 MET O O N N 298 MET CB C N N 299 MET CG C N N 300 MET SD S N N 301 MET CE C N N 302 MET OXT O N N 303 MET H H N N 304 MET H2 H N N 305 MET HA H N N 306 MET HB2 H N N 307 MET HB3 H N N 308 MET HG2 H N N 309 MET HG3 H N N 310 MET HE1 H N N 311 MET HE2 H N N 312 MET HE3 H N N 313 MET HXT H N N 314 NAG C1 C N R 315 NAG C2 C N R 316 NAG C3 C N R 317 NAG C4 C N S 318 NAG C5 C N R 319 NAG C6 C N N 320 NAG C7 C N N 321 NAG C8 C N N 322 NAG N2 N N N 323 NAG O1 O N N 324 NAG O3 O N N 325 NAG O4 O N N 326 NAG O5 O N N 327 NAG O6 O N N 328 NAG O7 O N N 329 NAG H1 H N N 330 NAG H2 H N N 331 NAG H3 H N N 332 NAG H4 H N N 333 NAG H5 H N N 334 NAG H61 H N N 335 NAG H62 H N N 336 NAG H81 H N N 337 NAG H82 H N N 338 NAG H83 H N N 339 NAG HN2 H N N 340 NAG HO1 H N N 341 NAG HO3 H N N 342 NAG HO4 H N N 343 NAG HO6 H N N 344 PHE N N N N 345 PHE CA C N S 346 PHE C C N N 347 PHE O O N N 348 PHE CB C N N 349 PHE CG C Y N 350 PHE CD1 C Y N 351 PHE CD2 C Y N 352 PHE CE1 C Y N 353 PHE CE2 C Y N 354 PHE CZ C Y N 355 PHE OXT O N N 356 PHE H H N N 357 PHE H2 H N N 358 PHE HA H N N 359 PHE HB2 H N N 360 PHE HB3 H N N 361 PHE HD1 H N N 362 PHE HD2 H N N 363 PHE HE1 H N N 364 PHE HE2 H N N 365 PHE HZ H N N 366 PHE HXT H N N 367 PRO N N N N 368 PRO CA C N S 369 PRO C C N N 370 PRO O O N N 371 PRO CB C N N 372 PRO CG C N N 373 PRO CD C N N 374 PRO OXT O N N 375 PRO H H N N 376 PRO HA H N N 377 PRO HB2 H N N 378 PRO HB3 H N N 379 PRO HG2 H N N 380 PRO HG3 H N N 381 PRO HD2 H N N 382 PRO HD3 H N N 383 PRO HXT H N N 384 SER N N N N 385 SER CA C N S 386 SER C C N N 387 SER O O N N 388 SER CB C N N 389 SER OG O N N 390 SER OXT O N N 391 SER H H N N 392 SER H2 H N N 393 SER HA H N N 394 SER HB2 H N N 395 SER HB3 H N N 396 SER HG H N N 397 SER HXT H N N 398 THR N N N N 399 THR CA C N S 400 THR C C N N 401 THR O O N N 402 THR CB C N R 403 THR OG1 O N N 404 THR CG2 C N N 405 THR OXT O N N 406 THR H H N N 407 THR H2 H N N 408 THR HA H N N 409 THR HB H N N 410 THR HG1 H N N 411 THR HG21 H N N 412 THR HG22 H N N 413 THR HG23 H N N 414 THR HXT H N N 415 TRP N N N N 416 TRP CA C N S 417 TRP C C N N 418 TRP O O N N 419 TRP CB C N N 420 TRP CG C Y N 421 TRP CD1 C Y N 422 TRP CD2 C Y N 423 TRP NE1 N Y N 424 TRP CE2 C Y N 425 TRP CE3 C Y N 426 TRP CZ2 C Y N 427 TRP CZ3 C Y N 428 TRP CH2 C Y N 429 TRP OXT O N N 430 TRP H H N N 431 TRP H2 H N N 432 TRP HA H N N 433 TRP HB2 H N N 434 TRP HB3 H N N 435 TRP HD1 H N N 436 TRP HE1 H N N 437 TRP HE3 H N N 438 TRP HZ2 H N N 439 TRP HZ3 H N N 440 TRP HH2 H N N 441 TRP HXT H N N 442 TYR N N N N 443 TYR CA C N S 444 TYR C C N N 445 TYR O O N N 446 TYR CB C N N 447 TYR CG C Y N 448 TYR CD1 C Y N 449 TYR CD2 C Y N 450 TYR CE1 C Y N 451 TYR CE2 C Y N 452 TYR CZ C Y N 453 TYR OH O N N 454 TYR OXT O N N 455 TYR H H N N 456 TYR H2 H N N 457 TYR HA H N N 458 TYR HB2 H N N 459 TYR HB3 H N N 460 TYR HD1 H N N 461 TYR HD2 H N N 462 TYR HE1 H N N 463 TYR HE2 H N N 464 TYR HH H N N 465 TYR HXT H N N 466 VAL N N N N 467 VAL CA C N S 468 VAL C C N N 469 VAL O O N N 470 VAL CB C N N 471 VAL CG1 C N N 472 VAL CG2 C N N 473 VAL OXT O N N 474 VAL H H N N 475 VAL H2 H N N 476 VAL HA H N N 477 VAL HB H N N 478 VAL HG11 H N N 479 VAL HG12 H N N 480 VAL HG13 H N N 481 VAL HG21 H N N 482 VAL HG22 H N N 483 VAL HG23 H N N 484 VAL HXT H N N 485 XYS C1 C N S 486 XYS C2 C N R 487 XYS C3 C N S 488 XYS C4 C N R 489 XYS C5 C N N 490 XYS O1 O N N 491 XYS O2 O N N 492 XYS O3 O N N 493 XYS O4 O N N 494 XYS O5 O N N 495 XYS H1 H N N 496 XYS H2 H N N 497 XYS H3 H N N 498 XYS H4 H N N 499 XYS H51 H N N 500 XYS H52 H N N 501 XYS HO1 H N N 502 XYS HO2 H N N 503 XYS HO3 H N N 504 XYS HO4 H N N 505 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FCA C1 C2 sing N N 83 FCA C1 O1 sing N N 84 FCA C1 O5 sing N N 85 FCA C1 H1 sing N N 86 FCA C2 C3 sing N N 87 FCA C2 O2 sing N N 88 FCA C2 H2 sing N N 89 FCA C3 C4 sing N N 90 FCA C3 O3 sing N N 91 FCA C3 H3 sing N N 92 FCA C4 C5 sing N N 93 FCA C4 O4 sing N N 94 FCA C4 H4 sing N N 95 FCA C5 C6 sing N N 96 FCA C5 O5 sing N N 97 FCA C5 H5 sing N N 98 FCA C6 H61 sing N N 99 FCA C6 H62 sing N N 100 FCA C6 H63 sing N N 101 FCA O1 HO1 sing N N 102 FCA O2 HO2 sing N N 103 FCA O3 HO3 sing N N 104 FCA O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 HOH O H1 sing N N 173 HOH O H2 sing N N 174 HYP N CA sing N N 175 HYP N CD sing N N 176 HYP N H sing N N 177 HYP CA C sing N N 178 HYP CA CB sing N N 179 HYP CA HA sing N N 180 HYP C O doub N N 181 HYP C OXT sing N N 182 HYP CB CG sing N N 183 HYP CB HB2 sing N N 184 HYP CB HB3 sing N N 185 HYP CG CD sing N N 186 HYP CG OD1 sing N N 187 HYP CG HG sing N N 188 HYP CD HD22 sing N N 189 HYP CD HD23 sing N N 190 HYP OD1 HD1 sing N N 191 HYP OXT HXT sing N N 192 ILE N CA sing N N 193 ILE N H sing N N 194 ILE N H2 sing N N 195 ILE CA C sing N N 196 ILE CA CB sing N N 197 ILE CA HA sing N N 198 ILE C O doub N N 199 ILE C OXT sing N N 200 ILE CB CG1 sing N N 201 ILE CB CG2 sing N N 202 ILE CB HB sing N N 203 ILE CG1 CD1 sing N N 204 ILE CG1 HG12 sing N N 205 ILE CG1 HG13 sing N N 206 ILE CG2 HG21 sing N N 207 ILE CG2 HG22 sing N N 208 ILE CG2 HG23 sing N N 209 ILE CD1 HD11 sing N N 210 ILE CD1 HD12 sing N N 211 ILE CD1 HD13 sing N N 212 ILE OXT HXT sing N N 213 LEU N CA sing N N 214 LEU N H sing N N 215 LEU N H2 sing N N 216 LEU CA C sing N N 217 LEU CA CB sing N N 218 LEU CA HA sing N N 219 LEU C O doub N N 220 LEU C OXT sing N N 221 LEU CB CG sing N N 222 LEU CB HB2 sing N N 223 LEU CB HB3 sing N N 224 LEU CG CD1 sing N N 225 LEU CG CD2 sing N N 226 LEU CG HG sing N N 227 LEU CD1 HD11 sing N N 228 LEU CD1 HD12 sing N N 229 LEU CD1 HD13 sing N N 230 LEU CD2 HD21 sing N N 231 LEU CD2 HD22 sing N N 232 LEU CD2 HD23 sing N N 233 LEU OXT HXT sing N N 234 LYS N CA sing N N 235 LYS N H sing N N 236 LYS N H2 sing N N 237 LYS CA C sing N N 238 LYS CA CB sing N N 239 LYS CA HA sing N N 240 LYS C O doub N N 241 LYS C OXT sing N N 242 LYS CB CG sing N N 243 LYS CB HB2 sing N N 244 LYS CB HB3 sing N N 245 LYS CG CD sing N N 246 LYS CG HG2 sing N N 247 LYS CG HG3 sing N N 248 LYS CD CE sing N N 249 LYS CD HD2 sing N N 250 LYS CD HD3 sing N N 251 LYS CE NZ sing N N 252 LYS CE HE2 sing N N 253 LYS CE HE3 sing N N 254 LYS NZ HZ1 sing N N 255 LYS NZ HZ2 sing N N 256 LYS NZ HZ3 sing N N 257 LYS OXT HXT sing N N 258 MAN C1 C2 sing N N 259 MAN C1 O1 sing N N 260 MAN C1 O5 sing N N 261 MAN C1 H1 sing N N 262 MAN C2 C3 sing N N 263 MAN C2 O2 sing N N 264 MAN C2 H2 sing N N 265 MAN C3 C4 sing N N 266 MAN C3 O3 sing N N 267 MAN C3 H3 sing N N 268 MAN C4 C5 sing N N 269 MAN C4 O4 sing N N 270 MAN C4 H4 sing N N 271 MAN C5 C6 sing N N 272 MAN C5 O5 sing N N 273 MAN C5 H5 sing N N 274 MAN C6 O6 sing N N 275 MAN C6 H61 sing N N 276 MAN C6 H62 sing N N 277 MAN O1 HO1 sing N N 278 MAN O2 HO2 sing N N 279 MAN O3 HO3 sing N N 280 MAN O4 HO4 sing N N 281 MAN O6 HO6 sing N N 282 MET N CA sing N N 283 MET N H sing N N 284 MET N H2 sing N N 285 MET CA C sing N N 286 MET CA CB sing N N 287 MET CA HA sing N N 288 MET C O doub N N 289 MET C OXT sing N N 290 MET CB CG sing N N 291 MET CB HB2 sing N N 292 MET CB HB3 sing N N 293 MET CG SD sing N N 294 MET CG HG2 sing N N 295 MET CG HG3 sing N N 296 MET SD CE sing N N 297 MET CE HE1 sing N N 298 MET CE HE2 sing N N 299 MET CE HE3 sing N N 300 MET OXT HXT sing N N 301 NAG C1 C2 sing N N 302 NAG C1 O1 sing N N 303 NAG C1 O5 sing N N 304 NAG C1 H1 sing N N 305 NAG C2 C3 sing N N 306 NAG C2 N2 sing N N 307 NAG C2 H2 sing N N 308 NAG C3 C4 sing N N 309 NAG C3 O3 sing N N 310 NAG C3 H3 sing N N 311 NAG C4 C5 sing N N 312 NAG C4 O4 sing N N 313 NAG C4 H4 sing N N 314 NAG C5 C6 sing N N 315 NAG C5 O5 sing N N 316 NAG C5 H5 sing N N 317 NAG C6 O6 sing N N 318 NAG C6 H61 sing N N 319 NAG C6 H62 sing N N 320 NAG C7 C8 sing N N 321 NAG C7 N2 sing N N 322 NAG C7 O7 doub N N 323 NAG C8 H81 sing N N 324 NAG C8 H82 sing N N 325 NAG C8 H83 sing N N 326 NAG N2 HN2 sing N N 327 NAG O1 HO1 sing N N 328 NAG O3 HO3 sing N N 329 NAG O4 HO4 sing N N 330 NAG O6 HO6 sing N N 331 PHE N CA sing N N 332 PHE N H sing N N 333 PHE N H2 sing N N 334 PHE CA C sing N N 335 PHE CA CB sing N N 336 PHE CA HA sing N N 337 PHE C O doub N N 338 PHE C OXT sing N N 339 PHE CB CG sing N N 340 PHE CB HB2 sing N N 341 PHE CB HB3 sing N N 342 PHE CG CD1 doub Y N 343 PHE CG CD2 sing Y N 344 PHE CD1 CE1 sing Y N 345 PHE CD1 HD1 sing N N 346 PHE CD2 CE2 doub Y N 347 PHE CD2 HD2 sing N N 348 PHE CE1 CZ doub Y N 349 PHE CE1 HE1 sing N N 350 PHE CE2 CZ sing Y N 351 PHE CE2 HE2 sing N N 352 PHE CZ HZ sing N N 353 PHE OXT HXT sing N N 354 PRO N CA sing N N 355 PRO N CD sing N N 356 PRO N H sing N N 357 PRO CA C sing N N 358 PRO CA CB sing N N 359 PRO CA HA sing N N 360 PRO C O doub N N 361 PRO C OXT sing N N 362 PRO CB CG sing N N 363 PRO CB HB2 sing N N 364 PRO CB HB3 sing N N 365 PRO CG CD sing N N 366 PRO CG HG2 sing N N 367 PRO CG HG3 sing N N 368 PRO CD HD2 sing N N 369 PRO CD HD3 sing N N 370 PRO OXT HXT sing N N 371 SER N CA sing N N 372 SER N H sing N N 373 SER N H2 sing N N 374 SER CA C sing N N 375 SER CA CB sing N N 376 SER CA HA sing N N 377 SER C O doub N N 378 SER C OXT sing N N 379 SER CB OG sing N N 380 SER CB HB2 sing N N 381 SER CB HB3 sing N N 382 SER OG HG sing N N 383 SER OXT HXT sing N N 384 THR N CA sing N N 385 THR N H sing N N 386 THR N H2 sing N N 387 THR CA C sing N N 388 THR CA CB sing N N 389 THR CA HA sing N N 390 THR C O doub N N 391 THR C OXT sing N N 392 THR CB OG1 sing N N 393 THR CB CG2 sing N N 394 THR CB HB sing N N 395 THR OG1 HG1 sing N N 396 THR CG2 HG21 sing N N 397 THR CG2 HG22 sing N N 398 THR CG2 HG23 sing N N 399 THR OXT HXT sing N N 400 TRP N CA sing N N 401 TRP N H sing N N 402 TRP N H2 sing N N 403 TRP CA C sing N N 404 TRP CA CB sing N N 405 TRP CA HA sing N N 406 TRP C O doub N N 407 TRP C OXT sing N N 408 TRP CB CG sing N N 409 TRP CB HB2 sing N N 410 TRP CB HB3 sing N N 411 TRP CG CD1 doub Y N 412 TRP CG CD2 sing Y N 413 TRP CD1 NE1 sing Y N 414 TRP CD1 HD1 sing N N 415 TRP CD2 CE2 doub Y N 416 TRP CD2 CE3 sing Y N 417 TRP NE1 CE2 sing Y N 418 TRP NE1 HE1 sing N N 419 TRP CE2 CZ2 sing Y N 420 TRP CE3 CZ3 doub Y N 421 TRP CE3 HE3 sing N N 422 TRP CZ2 CH2 doub Y N 423 TRP CZ2 HZ2 sing N N 424 TRP CZ3 CH2 sing Y N 425 TRP CZ3 HZ3 sing N N 426 TRP CH2 HH2 sing N N 427 TRP OXT HXT sing N N 428 TYR N CA sing N N 429 TYR N H sing N N 430 TYR N H2 sing N N 431 TYR CA C sing N N 432 TYR CA CB sing N N 433 TYR CA HA sing N N 434 TYR C O doub N N 435 TYR C OXT sing N N 436 TYR CB CG sing N N 437 TYR CB HB2 sing N N 438 TYR CB HB3 sing N N 439 TYR CG CD1 doub Y N 440 TYR CG CD2 sing Y N 441 TYR CD1 CE1 sing Y N 442 TYR CD1 HD1 sing N N 443 TYR CD2 CE2 doub Y N 444 TYR CD2 HD2 sing N N 445 TYR CE1 CZ doub Y N 446 TYR CE1 HE1 sing N N 447 TYR CE2 CZ sing Y N 448 TYR CE2 HE2 sing N N 449 TYR CZ OH sing N N 450 TYR OH HH sing N N 451 TYR OXT HXT sing N N 452 VAL N CA sing N N 453 VAL N H sing N N 454 VAL N H2 sing N N 455 VAL CA C sing N N 456 VAL CA CB sing N N 457 VAL CA HA sing N N 458 VAL C O doub N N 459 VAL C OXT sing N N 460 VAL CB CG1 sing N N 461 VAL CB CG2 sing N N 462 VAL CB HB sing N N 463 VAL CG1 HG11 sing N N 464 VAL CG1 HG12 sing N N 465 VAL CG1 HG13 sing N N 466 VAL CG2 HG21 sing N N 467 VAL CG2 HG22 sing N N 468 VAL CG2 HG23 sing N N 469 VAL OXT HXT sing N N 470 XYS C1 C2 sing N N 471 XYS C1 O1 sing N N 472 XYS C1 O5 sing N N 473 XYS C1 H1 sing N N 474 XYS C2 C3 sing N N 475 XYS C2 O2 sing N N 476 XYS C2 H2 sing N N 477 XYS C3 C4 sing N N 478 XYS C3 O3 sing N N 479 XYS C3 H3 sing N N 480 XYS C4 C5 sing N N 481 XYS C4 O4 sing N N 482 XYS C4 H4 sing N N 483 XYS C5 O5 sing N N 484 XYS C5 H51 sing N N 485 XYS C5 H52 sing N N 486 XYS O1 HO1 sing N N 487 XYS O2 HO2 sing N N 488 XYS O3 HO3 sing N N 489 XYS O4 HO4 sing N N 490 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 A NAG 1 A NAG 1 n B 2 NAG 2 A NAG 2 A NAG 2 n B 2 MAN 3 A MAN 3 A MAN 3 n B 2 XYS 4 A XYS 4 C XYS 6 n B 2 MAN 5 A MAN 5 A MAN 4 n B 2 MAN 6 A MAN 6 B MAN 5 n B 2 FCA 7 A FCA 7 D FCA 7 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FCA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFucpa FCA 'COMMON NAME' GMML 1.0 a-D-fucopyranose FCA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Fucp FCA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc XYS 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpa XYS 'COMMON NAME' GMML 1.0 a-D-xylopyranose XYS 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Xylp XYS 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DXylpa1-2[DManpa1-3][DManpa1-6]DManpa1-4DGlcpNAcb1-4[DFucpa1-3]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 ;WURCS=2.0/4,7,6/[a2122h-1b_1-5_2*NCC/3=O][a2112m-1a_1-5][a1122h-1a_1-5][a212h-1a_1-5]/1-2-1-3-4-3-3/a3-b1_a4-c1_c4-d1_d2-e1_d3-f1_d6-g1 ; WURCS PDB2Glycan 1.1.0 3 2 ;[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][b-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{[(2+1)][a-D-Xylp]{}[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 MAN C1 O1 2 NAG O4 HO4 sing ? 3 2 4 XYS C1 O1 3 MAN O2 HO2 sing ? 4 2 5 MAN C1 O1 3 MAN O3 HO3 sing ? 5 2 6 MAN C1 O1 3 MAN O6 HO6 sing ? 6 2 7 FCA C1 O1 1 NAG O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 MAN 3 n 2 XYS 4 n 2 MAN 5 n 2 MAN 6 n 2 FCA 7 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1N10 _pdbx_initial_refinement_model.details ? #