data_2HD7 # _entry.id 2HD7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HD7 pdb_00002hd7 10.2210/pdb2hd7/pdb RCSB RCSB038218 ? ? WWPDB D_1000038218 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HD7 _pdbx_database_status.recvd_initial_deposition_date 2006-06-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hellman, M.H.' 1 'Paavilainen, V.O.' 2 'Annila, A.' 3 'Lappalainen, P.' 4 'Permi, P.I.' 5 # _citation.id primary _citation.title 'Structural basis and evolutionary origin of actin filament capping by twinfilin' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 104 _citation.page_first 3113 _citation.page_last 3118 _citation.year 2007 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17360616 _citation.pdbx_database_id_DOI 10.1073/pnas.0608725104 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Paavilainen, V.O.' 1 ? primary 'Hellman, M.' 2 ? primary 'Helfer, E.' 3 ? primary 'Bovellan, M.' 4 ? primary 'Annila, A.' 5 ? primary 'Carlier, M.F.' 6 ? primary 'Permi, P.' 7 ? primary 'Lappalainen, P.' 8 ? # _cell.entry_id 2HD7 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2HD7 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Twinfilin-1 _entity.formula_weight 16638.953 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-terminal domain, residues 176-316' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein A6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AQGVAFPISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKHSHEGDYLESVV FIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVHPKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;AQGVAFPISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKHSHEGDYLESVV FIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVHPKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 GLY n 1 4 VAL n 1 5 ALA n 1 6 PHE n 1 7 PRO n 1 8 ILE n 1 9 SER n 1 10 ARG n 1 11 ASP n 1 12 ALA n 1 13 PHE n 1 14 GLN n 1 15 ALA n 1 16 LEU n 1 17 GLU n 1 18 LYS n 1 19 LEU n 1 20 SER n 1 21 LYS n 1 22 LYS n 1 23 GLN n 1 24 LEU n 1 25 ASN n 1 26 TYR n 1 27 VAL n 1 28 GLN n 1 29 LEU n 1 30 GLU n 1 31 ILE n 1 32 ASP n 1 33 ILE n 1 34 LYS n 1 35 ASN n 1 36 GLU n 1 37 THR n 1 38 ILE n 1 39 ILE n 1 40 LEU n 1 41 ALA n 1 42 ASN n 1 43 THR n 1 44 GLU n 1 45 ASN n 1 46 THR n 1 47 GLU n 1 48 LEU n 1 49 ARG n 1 50 ASP n 1 51 LEU n 1 52 PRO n 1 53 LYS n 1 54 ARG n 1 55 ILE n 1 56 PRO n 1 57 LYS n 1 58 ASP n 1 59 SER n 1 60 ALA n 1 61 ARG n 1 62 TYR n 1 63 HIS n 1 64 PHE n 1 65 PHE n 1 66 LEU n 1 67 TYR n 1 68 LYS n 1 69 HIS n 1 70 SER n 1 71 HIS n 1 72 GLU n 1 73 GLY n 1 74 ASP n 1 75 TYR n 1 76 LEU n 1 77 GLU n 1 78 SER n 1 79 VAL n 1 80 VAL n 1 81 PHE n 1 82 ILE n 1 83 TYR n 1 84 SER n 1 85 MET n 1 86 PRO n 1 87 GLY n 1 88 TYR n 1 89 THR n 1 90 CYS n 1 91 SER n 1 92 ILE n 1 93 ARG n 1 94 GLU n 1 95 ARG n 1 96 MET n 1 97 LEU n 1 98 TYR n 1 99 SER n 1 100 SER n 1 101 CYS n 1 102 LYS n 1 103 SER n 1 104 PRO n 1 105 LEU n 1 106 LEU n 1 107 GLU n 1 108 ILE n 1 109 VAL n 1 110 GLU n 1 111 ARG n 1 112 GLN n 1 113 LEU n 1 114 GLN n 1 115 MET n 1 116 ASP n 1 117 VAL n 1 118 ILE n 1 119 ARG n 1 120 LYS n 1 121 ILE n 1 122 GLU n 1 123 ILE n 1 124 ASP n 1 125 ASN n 1 126 GLY n 1 127 ASP n 1 128 GLU n 1 129 LEU n 1 130 THR n 1 131 ALA n 1 132 ASP n 1 133 PHE n 1 134 LEU n 1 135 TYR n 1 136 ASP n 1 137 GLU n 1 138 VAL n 1 139 HIS n 1 140 PRO n 1 141 LYS n 1 142 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Ptk9 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pRat4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TWF1_MOUSE _struct_ref.pdbx_db_accession Q91YR1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QGVAFPISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKHSHEGDYLESVVF IYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVHPKQ ; _struct_ref.pdbx_align_begin 176 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HD7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 142 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q91YR1 _struct_ref_seq.db_align_beg 176 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 316 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 176 _struct_ref_seq.pdbx_auth_seq_align_end 316 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2HD7 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q91YR1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'cloning artifact' _struct_ref_seq_dif.pdbx_auth_seq_num 175 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D 15N-HSQC' 1 2 1 13C-HSQC 1 3 1 '13C-(CT)-HSQC' 1 4 1 '3D HNCA' 1 5 1 'HN(CO)CA' 1 6 1 HNCACB 1 7 1 'CBCA(CO)NH' 1 8 1 'HNCO, HN(CA)CO' 1 9 1 'HC(C)H-COSY' 1 10 1 'H(C)CH-TOCSY' 1 11 1 'H)C(CO)NH' 1 12 1 'H(C)(CO)NH' 1 13 1 '(HB)CB(CGCDCE)HE' 1 14 1 'HB)CB(CGCD)HD' 1 15 1 NOESY-15N-HSQC 1 16 1 NOESY-13C-HSQC 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 60 _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM C-terminal domain of twinfilin U-15N, C13, 10 mM Bis-Tris, pH 6.8, 50 mM NaCl, 1 mM DTT, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2HD7 _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2HD7 _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2HD7 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal processing VNMR 6.1C ? 1 'data analysis' Sparky 3.110 'Goddard, T.D. and Kneller, D.G.' 2 'structure solution' CYANA 2.1 'Guntert, P., Mumenthaler, C., and Wuthrich, K.' 3 refinement Amber 8 'Case, D.A.' 4 # _exptl.entry_id 2HD7 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 2HD7 _struct.title 'Solution structure of C-teminal domain of twinfilin-1.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HD7 _struct_keywords.pdbx_keywords 'CONTRACTILE PROTEIN' _struct_keywords.text 'ADF-H, Actin binding protein, CONTRACTILE PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 9 ? SER A 20 ? SER A 183 SER A 194 1 ? 12 HELX_P HELX_P2 2 ASP A 50 ? ARG A 54 ? ASP A 224 ARG A 228 5 ? 5 HELX_P HELX_P3 3 SER A 91 ? ARG A 111 ? SER A 265 ARG A 285 1 ? 21 HELX_P HELX_P4 4 THR A 130 ? HIS A 139 ? THR A 304 HIS A 313 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 37 ? ASN A 42 ? THR A 211 ASN A 216 A 2 TYR A 26 ? ASP A 32 ? TYR A 200 ASP A 206 A 3 ARG A 61 ? HIS A 71 ? ARG A 235 HIS A 245 A 4 ASP A 74 ? SER A 84 ? ASP A 248 SER A 258 A 5 VAL A 117 ? ILE A 123 ? VAL A 291 ILE A 297 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 39 ? O ILE A 213 N GLU A 30 ? N GLU A 204 A 2 3 N LEU A 29 ? N LEU A 203 O TYR A 62 ? O TYR A 236 A 3 4 N PHE A 65 ? N PHE A 239 O VAL A 80 ? O VAL A 254 A 4 5 N VAL A 79 ? N VAL A 253 O ILE A 118 ? O ILE A 292 # _database_PDB_matrix.entry_id 2HD7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HD7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 175 175 ALA ALA A . n A 1 2 GLN 2 176 176 GLN GLN A . n A 1 3 GLY 3 177 177 GLY GLY A . n A 1 4 VAL 4 178 178 VAL VAL A . n A 1 5 ALA 5 179 179 ALA ALA A . n A 1 6 PHE 6 180 180 PHE PHE A . n A 1 7 PRO 7 181 181 PRO PRO A . n A 1 8 ILE 8 182 182 ILE ILE A . n A 1 9 SER 9 183 183 SER SER A . n A 1 10 ARG 10 184 184 ARG ARG A . n A 1 11 ASP 11 185 185 ASP ASP A . n A 1 12 ALA 12 186 186 ALA ALA A . n A 1 13 PHE 13 187 187 PHE PHE A . n A 1 14 GLN 14 188 188 GLN GLN A . n A 1 15 ALA 15 189 189 ALA ALA A . n A 1 16 LEU 16 190 190 LEU LEU A . n A 1 17 GLU 17 191 191 GLU GLU A . n A 1 18 LYS 18 192 192 LYS LYS A . n A 1 19 LEU 19 193 193 LEU LEU A . n A 1 20 SER 20 194 194 SER SER A . n A 1 21 LYS 21 195 195 LYS LYS A . n A 1 22 LYS 22 196 196 LYS LYS A . n A 1 23 GLN 23 197 197 GLN GLN A . n A 1 24 LEU 24 198 198 LEU LEU A . n A 1 25 ASN 25 199 199 ASN ASN A . n A 1 26 TYR 26 200 200 TYR TYR A . n A 1 27 VAL 27 201 201 VAL VAL A . n A 1 28 GLN 28 202 202 GLN GLN A . n A 1 29 LEU 29 203 203 LEU LEU A . n A 1 30 GLU 30 204 204 GLU GLU A . n A 1 31 ILE 31 205 205 ILE ILE A . n A 1 32 ASP 32 206 206 ASP ASP A . n A 1 33 ILE 33 207 207 ILE ILE A . n A 1 34 LYS 34 208 208 LYS LYS A . n A 1 35 ASN 35 209 209 ASN ASN A . n A 1 36 GLU 36 210 210 GLU GLU A . n A 1 37 THR 37 211 211 THR THR A . n A 1 38 ILE 38 212 212 ILE ILE A . n A 1 39 ILE 39 213 213 ILE ILE A . n A 1 40 LEU 40 214 214 LEU LEU A . n A 1 41 ALA 41 215 215 ALA ALA A . n A 1 42 ASN 42 216 216 ASN ASN A . n A 1 43 THR 43 217 217 THR THR A . n A 1 44 GLU 44 218 218 GLU GLU A . n A 1 45 ASN 45 219 219 ASN ASN A . n A 1 46 THR 46 220 220 THR THR A . n A 1 47 GLU 47 221 221 GLU GLU A . n A 1 48 LEU 48 222 222 LEU LEU A . n A 1 49 ARG 49 223 223 ARG ARG A . n A 1 50 ASP 50 224 224 ASP ASP A . n A 1 51 LEU 51 225 225 LEU LEU A . n A 1 52 PRO 52 226 226 PRO PRO A . n A 1 53 LYS 53 227 227 LYS LYS A . n A 1 54 ARG 54 228 228 ARG ARG A . n A 1 55 ILE 55 229 229 ILE ILE A . n A 1 56 PRO 56 230 230 PRO PRO A . n A 1 57 LYS 57 231 231 LYS LYS A . n A 1 58 ASP 58 232 232 ASP ASP A . n A 1 59 SER 59 233 233 SER SER A . n A 1 60 ALA 60 234 234 ALA ALA A . n A 1 61 ARG 61 235 235 ARG ARG A . n A 1 62 TYR 62 236 236 TYR TYR A . n A 1 63 HIS 63 237 237 HIS HIS A . n A 1 64 PHE 64 238 238 PHE PHE A . n A 1 65 PHE 65 239 239 PHE PHE A . n A 1 66 LEU 66 240 240 LEU LEU A . n A 1 67 TYR 67 241 241 TYR TYR A . n A 1 68 LYS 68 242 242 LYS LYS A . n A 1 69 HIS 69 243 243 HIS HIS A . n A 1 70 SER 70 244 244 SER SER A . n A 1 71 HIS 71 245 245 HIS HIS A . n A 1 72 GLU 72 246 246 GLU GLU A . n A 1 73 GLY 73 247 247 GLY GLY A . n A 1 74 ASP 74 248 248 ASP ASP A . n A 1 75 TYR 75 249 249 TYR TYR A . n A 1 76 LEU 76 250 250 LEU LEU A . n A 1 77 GLU 77 251 251 GLU GLU A . n A 1 78 SER 78 252 252 SER SER A . n A 1 79 VAL 79 253 253 VAL VAL A . n A 1 80 VAL 80 254 254 VAL VAL A . n A 1 81 PHE 81 255 255 PHE PHE A . n A 1 82 ILE 82 256 256 ILE ILE A . n A 1 83 TYR 83 257 257 TYR TYR A . n A 1 84 SER 84 258 258 SER SER A . n A 1 85 MET 85 259 259 MET MET A . n A 1 86 PRO 86 260 260 PRO PRO A . n A 1 87 GLY 87 261 261 GLY GLY A . n A 1 88 TYR 88 262 262 TYR TYR A . n A 1 89 THR 89 263 263 THR THR A . n A 1 90 CYS 90 264 264 CYS CYS A . n A 1 91 SER 91 265 265 SER SER A . n A 1 92 ILE 92 266 266 ILE ILE A . n A 1 93 ARG 93 267 267 ARG ARG A . n A 1 94 GLU 94 268 268 GLU GLU A . n A 1 95 ARG 95 269 269 ARG ARG A . n A 1 96 MET 96 270 270 MET MET A . n A 1 97 LEU 97 271 271 LEU LEU A . n A 1 98 TYR 98 272 272 TYR TYR A . n A 1 99 SER 99 273 273 SER SER A . n A 1 100 SER 100 274 274 SER SER A . n A 1 101 CYS 101 275 275 CYS CYS A . n A 1 102 LYS 102 276 276 LYS LYS A . n A 1 103 SER 103 277 277 SER SER A . n A 1 104 PRO 104 278 278 PRO PRO A . n A 1 105 LEU 105 279 279 LEU LEU A . n A 1 106 LEU 106 280 280 LEU LEU A . n A 1 107 GLU 107 281 281 GLU GLU A . n A 1 108 ILE 108 282 282 ILE ILE A . n A 1 109 VAL 109 283 283 VAL VAL A . n A 1 110 GLU 110 284 284 GLU GLU A . n A 1 111 ARG 111 285 285 ARG ARG A . n A 1 112 GLN 112 286 286 GLN GLN A . n A 1 113 LEU 113 287 287 LEU LEU A . n A 1 114 GLN 114 288 288 GLN GLN A . n A 1 115 MET 115 289 289 MET MET A . n A 1 116 ASP 116 290 290 ASP ASP A . n A 1 117 VAL 117 291 291 VAL VAL A . n A 1 118 ILE 118 292 292 ILE ILE A . n A 1 119 ARG 119 293 293 ARG ARG A . n A 1 120 LYS 120 294 294 LYS LYS A . n A 1 121 ILE 121 295 295 ILE ILE A . n A 1 122 GLU 122 296 296 GLU GLU A . n A 1 123 ILE 123 297 297 ILE ILE A . n A 1 124 ASP 124 298 298 ASP ASP A . n A 1 125 ASN 125 299 299 ASN ASN A . n A 1 126 GLY 126 300 300 GLY GLY A . n A 1 127 ASP 127 301 301 ASP ASP A . n A 1 128 GLU 128 302 302 GLU GLU A . n A 1 129 LEU 129 303 303 LEU LEU A . n A 1 130 THR 130 304 304 THR THR A . n A 1 131 ALA 131 305 305 ALA ALA A . n A 1 132 ASP 132 306 306 ASP ASP A . n A 1 133 PHE 133 307 307 PHE PHE A . n A 1 134 LEU 134 308 308 LEU LEU A . n A 1 135 TYR 135 309 309 TYR TYR A . n A 1 136 ASP 136 310 310 ASP ASP A . n A 1 137 GLU 137 311 311 GLU GLU A . n A 1 138 VAL 138 312 312 VAL VAL A . n A 1 139 HIS 139 313 313 HIS HIS A . n A 1 140 PRO 140 314 314 PRO PRO A . n A 1 141 LYS 141 315 315 LYS LYS A . n A 1 142 GLN 142 316 316 GLN GLN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 235 ? ? CZ A ARG 235 ? ? NH1 A ARG 235 ? ? 123.39 120.30 3.09 0.50 N 2 3 NE A ARG 223 ? ? CZ A ARG 223 ? ? NH1 A ARG 223 ? ? 124.06 120.30 3.76 0.50 N 3 5 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.73 120.30 3.43 0.50 N 4 8 NE A ARG 223 ? ? CZ A ARG 223 ? ? NH1 A ARG 223 ? ? 123.35 120.30 3.05 0.50 N 5 8 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.38 120.30 3.08 0.50 N 6 8 NE A ARG 269 ? ? CZ A ARG 269 ? ? NH1 A ARG 269 ? ? 123.50 120.30 3.20 0.50 N 7 9 NE A ARG 223 ? ? CZ A ARG 223 ? ? NH1 A ARG 223 ? ? 123.55 120.30 3.25 0.50 N 8 9 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.84 120.30 3.54 0.50 N 9 9 NE A ARG 235 ? ? CZ A ARG 235 ? ? NH1 A ARG 235 ? ? 123.61 120.30 3.31 0.50 N 10 10 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.75 120.30 3.45 0.50 N 11 10 NE A ARG 269 ? ? CZ A ARG 269 ? ? NH1 A ARG 269 ? ? 123.39 120.30 3.09 0.50 N 12 11 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.63 120.30 3.33 0.50 N 13 13 NE A ARG 228 ? ? CZ A ARG 228 ? ? NH1 A ARG 228 ? ? 123.67 120.30 3.37 0.50 N 14 13 NE A ARG 235 ? ? CZ A ARG 235 ? ? NH1 A ARG 235 ? ? 123.63 120.30 3.33 0.50 N 15 15 NE A ARG 285 ? ? CZ A ARG 285 ? ? NH1 A ARG 285 ? ? 123.42 120.30 3.12 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 200 ? ? -147.82 51.60 2 1 THR A 217 ? ? -144.38 26.27 3 1 GLU A 246 ? ? 49.06 27.59 4 1 THR A 263 ? ? -146.28 -4.12 5 1 ASN A 299 ? ? -148.51 -15.26 6 1 HIS A 313 ? ? -117.63 62.28 7 2 TYR A 200 ? ? -149.15 55.68 8 2 ALA A 215 ? ? -134.66 -44.23 9 2 THR A 217 ? ? -143.03 23.12 10 2 THR A 263 ? ? -143.84 -5.28 11 2 ARG A 285 ? ? -130.33 -35.34 12 2 ASN A 299 ? ? -141.39 -3.77 13 3 TYR A 200 ? ? -148.85 50.84 14 3 ALA A 215 ? ? -133.49 -45.28 15 3 THR A 217 ? ? -143.86 26.44 16 3 ASN A 299 ? ? -148.60 -15.98 17 3 HIS A 313 ? ? -116.47 69.41 18 4 TYR A 200 ? ? -148.19 53.32 19 4 ALA A 215 ? ? -135.32 -42.64 20 4 THR A 217 ? ? -144.82 22.95 21 4 THR A 263 ? ? -144.98 -32.65 22 4 LYS A 294 ? ? -118.94 62.80 23 4 ASN A 299 ? ? -144.38 -2.96 24 4 HIS A 313 ? ? -119.32 71.91 25 5 TYR A 200 ? ? -143.64 52.47 26 5 ALA A 215 ? ? -132.23 -43.09 27 5 THR A 217 ? ? -143.35 21.60 28 5 GLU A 246 ? ? 49.49 29.09 29 5 ASN A 299 ? ? -145.46 -3.11 30 5 HIS A 313 ? ? -118.24 69.38 31 6 PRO A 181 ? ? -88.25 30.47 32 6 ILE A 182 ? ? 47.14 -156.03 33 6 TYR A 200 ? ? -146.66 45.64 34 6 ALA A 215 ? ? -135.88 -38.22 35 6 THR A 217 ? ? -142.36 24.31 36 6 THR A 263 ? ? -147.46 -6.93 37 6 ARG A 285 ? ? -133.39 -35.42 38 6 ASN A 299 ? ? -154.14 -14.73 39 6 HIS A 313 ? ? -112.77 64.60 40 7 TYR A 200 ? ? -148.83 48.29 41 7 THR A 217 ? ? -143.91 25.98 42 7 GLU A 246 ? ? 49.52 29.06 43 7 THR A 263 ? ? -142.76 -21.79 44 7 ASN A 299 ? ? -151.58 -6.46 45 8 TYR A 200 ? ? -148.43 57.28 46 8 ALA A 215 ? ? -134.00 -41.41 47 8 THR A 217 ? ? -145.35 17.64 48 8 THR A 263 ? ? -145.40 -0.99 49 8 ASN A 299 ? ? -145.01 -3.89 50 8 HIS A 313 ? ? -117.32 58.35 51 9 TYR A 200 ? ? -150.17 53.94 52 9 ALA A 215 ? ? -132.38 -41.00 53 9 THR A 217 ? ? -143.37 20.37 54 9 ASN A 299 ? ? -150.64 -5.24 55 9 HIS A 313 ? ? -115.70 58.00 56 10 SER A 194 ? ? -69.82 0.41 57 10 TYR A 200 ? ? -148.36 55.98 58 10 ALA A 215 ? ? -132.22 -43.38 59 10 THR A 217 ? ? -143.44 23.32 60 10 THR A 263 ? ? -142.73 -5.82 61 10 LYS A 294 ? ? -112.94 66.12 62 10 ASN A 299 ? ? -150.13 -20.82 63 10 HIS A 313 ? ? -116.65 64.52 64 11 PRO A 181 ? ? -94.02 33.24 65 11 ILE A 182 ? ? 48.04 -158.09 66 11 TYR A 200 ? ? -147.84 53.40 67 11 ALA A 215 ? ? -133.93 -41.95 68 11 THR A 217 ? ? -144.64 23.13 69 11 THR A 263 ? ? -145.21 -37.10 70 11 ASN A 299 ? ? -143.69 -17.06 71 11 HIS A 313 ? ? -119.21 63.31 72 12 ASN A 199 ? ? 56.82 16.47 73 12 TYR A 200 ? ? -156.09 52.90 74 12 ALA A 215 ? ? -132.15 -41.45 75 12 THR A 217 ? ? -142.47 21.99 76 12 THR A 263 ? ? -141.06 -27.03 77 12 ASN A 299 ? ? -149.38 -5.37 78 12 HIS A 313 ? ? -119.82 70.16 79 13 ASN A 199 ? ? 72.79 -2.02 80 13 TYR A 200 ? ? -143.43 33.86 81 13 ALA A 215 ? ? -133.16 -41.21 82 13 THR A 217 ? ? -149.05 37.82 83 13 THR A 263 ? ? -140.39 -17.88 84 13 ASN A 299 ? ? -146.17 -15.32 85 14 TYR A 200 ? ? -145.61 50.30 86 14 ALA A 215 ? ? -132.33 -44.08 87 14 THR A 217 ? ? -146.58 23.39 88 14 ASP A 232 ? ? -140.58 -0.65 89 14 THR A 263 ? ? -146.27 -6.93 90 14 ASN A 299 ? ? -147.72 -17.30 91 14 HIS A 313 ? ? -119.55 71.63 92 15 TYR A 200 ? ? -147.79 54.27 93 15 ALA A 215 ? ? -130.49 -43.37 94 15 THR A 217 ? ? -143.52 22.61 95 15 THR A 263 ? ? -146.11 -20.51 96 15 LYS A 294 ? ? -117.97 63.57 97 15 ASN A 299 ? ? -145.44 -2.56 98 15 HIS A 313 ? ? -117.09 64.49 #