HEADER BIOSYNTHETIC PROTEIN 22-JUN-06 2HES TITLE CYTOSOLIC IRON-SULPHUR ASSEMBLY PROTEIN- 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: YDR267CP; COMPND 3 CHAIN: X; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YDR267CP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-PROPELLER, WD40 REPEAT, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.SRINIVASAN,H.MICHEL,R.LILL,J.A.N.DAILI,A.J.PIERIK REVDAT 5 14-FEB-24 2HES 1 REMARK LINK REVDAT 4 18-OCT-17 2HES 1 REMARK REVDAT 3 24-FEB-09 2HES 1 VERSN REVDAT 2 23-OCT-07 2HES 1 JRNL REVDAT 1 03-JUL-07 2HES 0 JRNL AUTH V.SRINIVASAN,D.J.NETZ,H.WEBERT,J.MASCARENHAS,A.J.PIERIK, JRNL AUTH 2 H.MICHEL,R.LILL JRNL TITL STRUCTURE OF THE YEAST WD40 DOMAIN PROTEIN CIA1, A COMPONENT JRNL TITL 2 ACTING LATE IN IRON-SULFUR PROTEIN BIOGENESIS. JRNL REF STRUCTURE V. 15 1246 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17937914 JRNL DOI 10.1016/J.STR.2007.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 34661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1115 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2271 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2437 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.786 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2496 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3394 ; 1.784 ; 1.914 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 304 ; 7.949 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;34.621 ;24.609 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 403 ;16.666 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;20.164 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 375 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1879 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1291 ; 0.310 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1650 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 313 ; 0.193 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.167 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.239 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.197 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1556 ; 1.099 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2435 ; 1.804 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1136 ; 2.600 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 959 ; 3.639 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : X 5 X 326 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3790 6.9630 17.8360 REMARK 3 T TENSOR REMARK 3 T11: -0.1755 T22: -0.1331 REMARK 3 T33: -0.1415 T12: -0.0315 REMARK 3 T13: -0.0292 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.2105 L22: 1.9323 REMARK 3 L33: 2.4514 L12: 0.1023 REMARK 3 L13: 0.5075 L23: -0.0465 REMARK 3 S TENSOR REMARK 3 S11: 0.1259 S12: -0.2274 S13: -0.1445 REMARK 3 S21: 0.1915 S22: 0.0012 S23: -0.0981 REMARK 3 S31: 0.2660 S32: -0.0735 S33: -0.1270 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SLS; EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X10SA; X31 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.931; 0.976 REMARK 200 MONOCHROMATOR : SI 111; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; MAR SCANNER 345 MM REMARK 200 PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34661 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 17.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22%PEG 4000, 20MM TRIS-HCL, PH = 8.0 REMARK 280 AND 100MM CACL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.0K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.60550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.18300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.01300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.18300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.60550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.01300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 ALA X 2 REMARK 465 GLU X 88 REMARK 465 GLU X 89 REMARK 465 SER X 90 REMARK 465 ALA X 91 REMARK 465 ASP X 92 REMARK 465 ARG X 93 REMARK 465 THR X 94 REMARK 465 GLY X 105 REMARK 465 HIS X 106 REMARK 465 GLU X 107 REMARK 465 ASN X 108 REMARK 465 GLU X 305 REMARK 465 LEU X 306 REMARK 465 ASN X 307 REMARK 465 GLY X 308 REMARK 465 LYS X 309 REMARK 465 GLU X 327 REMARK 465 LYS X 328 REMARK 465 ALA X 329 REMARK 465 ALA X 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS X 42 CG CD CE NZ REMARK 470 TYR X 43 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP X 44 CG OD1 OD2 REMARK 470 ASP X 45 CG OD1 OD2 REMARK 470 LYS X 58 CB CG CD CE NZ REMARK 470 GLU X 233 CG CD OE1 OE2 REMARK 470 ASP X 234 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD LYS X 157 O TRP X 201 2.01 REMARK 500 OD2 ASP X 280 O HOH X 698 2.11 REMARK 500 O SER X 9 O HOH X 669 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP X 155 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG X 251 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS X 42 -21.92 -148.78 REMARK 500 TYR X 43 -2.41 95.89 REMARK 500 ASP X 45 -88.93 -114.15 REMARK 500 ASP X 53 -92.21 -142.31 REMARK 500 HIS X 57 82.39 83.86 REMARK 500 LYS X 58 -33.62 -140.00 REMARK 500 HIS X 69 23.88 49.18 REMARK 500 SER X 80 -4.11 87.41 REMARK 500 LEU X 100 -42.59 -141.31 REMARK 500 LYS X 129 2.41 80.26 REMARK 500 ASP X 155 119.30 -28.43 REMARK 500 SER X 164 3.02 -152.41 REMARK 500 ASP X 185 -4.01 66.33 REMARK 500 VAL X 248 -54.04 -136.28 REMARK 500 ARG X 251 45.36 -179.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA X 56 HIS X 57 37.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA X 400 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER X 221 OG REMARK 620 2 SER X 221 O 60.5 REMARK 620 3 HOH X 426 O 87.9 115.3 REMARK 620 4 HOH X 471 O 75.6 129.6 84.5 REMARK 620 5 HOH X 631 O 101.3 73.2 170.0 93.9 REMARK 620 6 HOH X 681 O 150.3 148.3 82.4 75.6 87.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA X 400 DBREF 2HES X 1 330 UNP Q05583 Q05583_YEAST 1 330 SEQRES 1 X 330 MET ALA SER ILE ASN LEU ILE LYS SER LEU LYS LEU TYR SEQRES 2 X 330 LYS GLU LYS ILE TRP SER PHE ASP PHE SER GLN GLY ILE SEQRES 3 X 330 LEU ALA THR GLY SER THR ASP ARG LYS ILE LYS LEU VAL SEQRES 4 X 330 SER VAL LYS TYR ASP ASP PHE THR LEU ILE ASP VAL LEU SEQRES 5 X 330 ASP GLU THR ALA HIS LYS LYS ALA ILE ARG SER VAL ALA SEQRES 6 X 330 TRP ARG PRO HIS THR SER LEU LEU ALA ALA GLY SER PHE SEQRES 7 X 330 ASP SER THR VAL SER ILE TRP ALA LYS GLU GLU SER ALA SEQRES 8 X 330 ASP ARG THR PHE GLU MET ASP LEU LEU ALA ILE ILE GLU SEQRES 9 X 330 GLY HIS GLU ASN GLU VAL LYS GLY VAL ALA TRP SER ASN SEQRES 10 X 330 ASP GLY TYR TYR LEU ALA THR CYS SER ARG ASP LYS SER SEQRES 11 X 330 VAL TRP ILE TRP GLU THR ASP GLU SER GLY GLU GLU TYR SEQRES 12 X 330 GLU CYS ILE SER VAL LEU GLN GLU HIS SER GLN ASP VAL SEQRES 13 X 330 LYS HIS VAL ILE TRP HIS PRO SER GLU ALA LEU LEU ALA SEQRES 14 X 330 SER SER SER TYR ASP ASP THR VAL ARG ILE TRP LYS ASP SEQRES 15 X 330 TYR ASP ASP ASP TRP GLU CYS VAL ALA VAL LEU ASN GLY SEQRES 16 X 330 HIS GLU GLY THR VAL TRP SER SER ASP PHE ASP LYS THR SEQRES 17 X 330 GLU GLY VAL PHE ARG LEU CYS SER GLY SER ASP ASP SER SEQRES 18 X 330 THR VAL ARG VAL TRP LYS TYR MET GLY ASP ASP GLU ASP SEQRES 19 X 330 ASP GLN GLN GLU TRP VAL CYS GLU ALA ILE LEU PRO ASP SEQRES 20 X 330 VAL HIS LYS ARG GLN VAL TYR ASN VAL ALA TRP GLY PHE SEQRES 21 X 330 ASN GLY LEU ILE ALA SER VAL GLY ALA ASP GLY VAL LEU SEQRES 22 X 330 ALA VAL TYR GLU GLU VAL ASP GLY GLU TRP LYS VAL PHE SEQRES 23 X 330 ALA LYS ARG ALA LEU CYS HIS GLY VAL TYR GLU ILE ASN SEQRES 24 X 330 VAL VAL LYS TRP LEU GLU LEU ASN GLY LYS THR ILE LEU SEQRES 25 X 330 ALA THR GLY GLY ASP ASP GLY ILE VAL ASN PHE TRP SER SEQRES 26 X 330 LEU GLU LYS ALA ALA HET CA X 400 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *301(H2 O) SHEET 1 A 4 ASN X 5 LYS X 11 0 SHEET 2 A 4 ILE X 320 SER X 325 -1 O SER X 325 N ASN X 5 SHEET 3 A 4 LEU X 312 GLY X 316 -1 N LEU X 312 O TRP X 324 SHEET 4 A 4 ILE X 298 TRP X 303 -1 N ASN X 299 O GLY X 315 SHEET 1 B 4 ILE X 17 SER X 23 0 SHEET 2 B 4 ILE X 26 SER X 31 -1 O ALA X 28 N ASP X 21 SHEET 3 B 4 ILE X 36 SER X 40 -1 O VAL X 39 N LEU X 27 SHEET 4 B 4 THR X 47 LEU X 52 -1 O THR X 47 N SER X 40 SHEET 1 C 4 ILE X 61 TRP X 66 0 SHEET 2 C 4 LEU X 72 SER X 77 -1 O ALA X 74 N ALA X 65 SHEET 3 C 4 VAL X 82 ALA X 86 -1 O TRP X 85 N LEU X 73 SHEET 4 C 4 ASP X 98 ILE X 103 -1 O ASP X 98 N ALA X 86 SHEET 1 D 4 VAL X 110 TRP X 115 0 SHEET 2 D 4 TYR X 121 SER X 126 -1 O ALA X 123 N ALA X 114 SHEET 3 D 4 VAL X 131 GLU X 135 -1 O TRP X 134 N LEU X 122 SHEET 4 D 4 GLU X 144 LEU X 149 -1 O LEU X 149 N VAL X 131 SHEET 1 E 4 VAL X 156 TRP X 161 0 SHEET 2 E 4 LEU X 167 SER X 172 -1 O ALA X 169 N ILE X 160 SHEET 3 E 4 VAL X 177 TYR X 183 -1 O TRP X 180 N LEU X 168 SHEET 4 E 4 ASP X 186 LEU X 193 -1 O LEU X 193 N VAL X 177 SHEET 1 F 4 VAL X 200 PHE X 205 0 SHEET 2 F 4 ARG X 213 SER X 218 -1 O CYS X 215 N ASP X 204 SHEET 3 F 4 VAL X 223 ASP X 231 -1 O TRP X 226 N LEU X 214 SHEET 4 F 4 GLN X 237 ILE X 244 -1 O GLU X 238 N MET X 229 SHEET 1 G 4 VAL X 253 TRP X 258 0 SHEET 2 G 4 ILE X 264 GLY X 268 -1 O ALA X 265 N ALA X 257 SHEET 3 G 4 LEU X 273 VAL X 279 -1 O TYR X 276 N ILE X 264 SHEET 4 G 4 GLU X 282 ARG X 289 -1 O ALA X 287 N VAL X 275 LINK OG SER X 221 CA CA X 400 1555 1555 2.45 LINK O SER X 221 CA CA X 400 1555 1555 2.91 LINK CA CA X 400 O HOH X 426 1555 1555 2.58 LINK CA CA X 400 O HOH X 471 1555 1555 2.39 LINK CA CA X 400 O HOH X 631 1555 1555 2.23 LINK CA CA X 400 O HOH X 681 1555 1555 2.20 CISPEP 1 ASP X 44 ASP X 45 0 -21.69 CISPEP 2 ASP X 45 PHE X 46 0 -23.37 CISPEP 3 LYS X 250 ARG X 251 0 8.71 SITE 1 AC1 6 SER X 221 ASP X 247 HOH X 426 HOH X 471 SITE 2 AC1 6 HOH X 631 HOH X 681 CRYST1 35.211 70.026 130.366 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028400 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007671 0.00000