HEADER HYDROLASE 24-JUN-06 2HFJ TITLE PIKROMYCIN THIOESTERASE WITH COVALENT PENTAKETIDE AFFINITY LABEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE I POLYKETIDE SYNTHASE PIKAIV; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: THIOESTERASE DOMAIN; COMPND 5 SYNONYM: PIKROMYCIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES VENEZUELAE; SOURCE 3 ORGANISM_TAXID: 54571; SOURCE 4 GENE: PIKAIV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS KEYWDS ALPHA/BETA HYDROLASE, THIOESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.L.AKEY,J.D.KITTENDORF,J.W.GIRALDES,R.A.FECIK,D.H.SHERMAN,J.L.SMITH REVDAT 3 18-OCT-17 2HFJ 1 REMARK REVDAT 2 24-FEB-09 2HFJ 1 VERSN REVDAT 1 19-SEP-06 2HFJ 0 JRNL AUTH D.L.AKEY,J.D.KITTENDORF,J.W.GIRALDES,R.A.FECIK,D.H.SHERMAN, JRNL AUTH 2 J.L.SMITH JRNL TITL STRUCTURAL BASIS FOR MACROLACTONIZATION BY THE PIKROMYCIN JRNL TITL 2 THIOESTERASE JRNL REF NAT.CHEM.BIOL. V. 2 537 2006 JRNL REFN ISSN 1552-4450 JRNL PMID 16969372 JRNL DOI 10.1038/NCHEMBIO824 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 56330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2932 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4040 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4198 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 405 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.06000 REMARK 3 B22 (A**2) : -0.95000 REMARK 3 B33 (A**2) : 3.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.520 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4392 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5997 ; 1.286 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 562 ; 5.373 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;31.498 ;22.637 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 614 ;14.936 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;16.091 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 642 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3491 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1937 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2952 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 354 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.206 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2873 ; 2.368 ; 3.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4439 ; 3.508 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1707 ; 2.338 ; 3.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1558 ; 3.540 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HFJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97922 REMARK 200 MONOCHROMATOR : APS BEAMLINE 23ID-D REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59323 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.55900 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M LI2SO4, 100MM HEPES PH 7.6, 80MM REMARK 280 MGCL2, 2MM DTT, 5% DMSO, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 53.84300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.53150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.84300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.53150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSEMBLY IS DIMER IN AU REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -136.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 107.68600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 131.06300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2078 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 4 REMARK 465 THR A 5 REMARK 465 GLY A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ARG A 64 REMARK 465 ALA A 65 REMARK 465 THR A 111 REMARK 465 GLY A 112 REMARK 465 THR A 113 REMARK 465 ILE A 293 REMARK 465 GLU A 294 REMARK 465 GLY A 295 REMARK 465 ALA A 296 REMARK 465 GLY A 297 REMARK 465 LYS A 298 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 LEU B -7 REMARK 465 VAL B -6 REMARK 465 PRO B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 ASP B 4 REMARK 465 THR B 5 REMARK 465 GLY B 6 REMARK 465 ALA B 7 REMARK 465 GLY B 8 REMARK 465 ARG B 64 REMARK 465 ALA B 65 REMARK 465 GLY B 110 REMARK 465 THR B 111 REMARK 465 GLY B 112 REMARK 465 THR B 113 REMARK 465 GLY B 292 REMARK 465 ILE B 293 REMARK 465 GLU B 294 REMARK 465 GLY B 295 REMARK 465 ALA B 296 REMARK 465 GLY B 297 REMARK 465 LYS B 298 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 66 CG CD OE1 OE2 REMARK 480 ARG A 135 NE CZ NH1 NH2 REMARK 480 ARG B 51 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 163 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 695 O HOH A 700 2.11 REMARK 500 OD1 ASP A 243 O HOH A 513 2.13 REMARK 500 O GLY A 138 O HOH A 612 2.17 REMARK 500 O HOH B 2231 O HOH B 2250 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 96 -52.42 -120.24 REMARK 500 SER A 148 -123.32 58.21 REMARK 500 ALA A 167 59.18 -140.27 REMARK 500 GLU B 95 -0.55 80.61 REMARK 500 SER B 148 -123.70 64.43 REMARK 500 ARG B 273 -86.43 -140.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 509 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 256 OD1 REMARK 620 2 HOH A 561 O 105.9 REMARK 620 3 ASP A 256 OD1 72.7 149.5 REMARK 620 4 HIS A 254 NE2 71.2 88.1 118.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 2036 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YML A 448 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MNA RELATED DB: PDB REMARK 900 RELATED ID: 2HFK RELATED DB: PDB DBREF 2HFJ A 1 298 UNP Q9ZGI2 Q9ZGI2_9ACTO 1049 1346 DBREF 2HFJ B 1 298 UNP Q9ZGI2 Q9ZGI2_9ACTO 1049 1346 SEQADV 2HFJ MET A -20 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY A -19 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER A -18 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER A -17 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ HIS A -16 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS A -15 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS A -14 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS A -13 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS A -12 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS A -11 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ SER A -10 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER A -9 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY A -8 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ LEU A -7 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ VAL A -6 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ PRO A -5 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ ARG A -4 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY A -3 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER A -2 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ HIS A -1 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ MET A 0 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ MET B -20 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY B -19 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER B -18 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER B -17 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ HIS B -16 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS B -15 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS B -14 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS B -13 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS B -12 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ HIS B -11 UNP Q9ZGI2 EXPRESSION TAG SEQADV 2HFJ SER B -10 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER B -9 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY B -8 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ LEU B -7 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ VAL B -6 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ PRO B -5 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ ARG B -4 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ GLY B -3 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ SER B -2 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ HIS B -1 UNP Q9ZGI2 CLONING ARTIFACT SEQADV 2HFJ MET B 0 UNP Q9ZGI2 CLONING ARTIFACT SEQRES 1 A 319 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 319 LEU VAL PRO ARG GLY SER HIS MET SER GLY ALA ASP THR SEQRES 3 A 319 GLY ALA GLY ALA GLY MET PHE ARG ALA LEU PHE ARG GLN SEQRES 4 A 319 ALA VAL GLU ASP ASP ARG TYR GLY GLU PHE LEU ASP VAL SEQRES 5 A 319 LEU ALA GLU ALA SER ALA PHE ARG PRO GLN PHE ALA SER SEQRES 6 A 319 PRO GLU ALA CYS SER GLU ARG LEU ASP PRO VAL LEU LEU SEQRES 7 A 319 ALA GLY GLY PRO THR ASP ARG ALA GLU GLY ARG ALA VAL SEQRES 8 A 319 LEU VAL GLY CYS THR GLY THR ALA ALA ASN GLY GLY PRO SEQRES 9 A 319 HIS GLU PHE LEU ARG LEU SER THR SER PHE GLN GLU GLU SEQRES 10 A 319 ARG ASP PHE LEU ALA VAL PRO LEU PRO GLY TYR GLY THR SEQRES 11 A 319 GLY THR GLY THR GLY THR ALA LEU LEU PRO ALA ASP LEU SEQRES 12 A 319 ASP THR ALA LEU ASP ALA GLN ALA ARG ALA ILE LEU ARG SEQRES 13 A 319 ALA ALA GLY ASP ALA PRO VAL VAL LEU LEU GLY HIS SER SEQRES 14 A 319 GLY GLY ALA LEU LEU ALA HIS GLU LEU ALA PHE ARG LEU SEQRES 15 A 319 GLU ARG ALA HIS GLY ALA PRO PRO ALA GLY ILE VAL LEU SEQRES 16 A 319 VAL ASP PRO TYR PRO PRO GLY HIS GLN GLU PRO ILE GLU SEQRES 17 A 319 VAL TRP SER ARG GLN LEU GLY GLU GLY LEU PHE ALA GLY SEQRES 18 A 319 GLU LEU GLU PRO MET SER ASP ALA ARG LEU LEU ALA MET SEQRES 19 A 319 GLY ARG TYR ALA ARG PHE LEU ALA GLY PRO ARG PRO GLY SEQRES 20 A 319 ARG SER SER ALA PRO VAL LEU LEU VAL ARG ALA SER GLU SEQRES 21 A 319 PRO LEU GLY ASP TRP GLN GLU GLU ARG GLY ASP TRP ARG SEQRES 22 A 319 ALA HIS TRP ASP LEU PRO HIS THR VAL ALA ASP VAL PRO SEQRES 23 A 319 GLY ASP HIS PHE THR MET MET ARG ASP HIS ALA PRO ALA SEQRES 24 A 319 VAL ALA GLU ALA VAL LEU SER TRP LEU ASP ALA ILE GLU SEQRES 25 A 319 GLY ILE GLU GLY ALA GLY LYS SEQRES 1 B 319 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 319 LEU VAL PRO ARG GLY SER HIS MET SER GLY ALA ASP THR SEQRES 3 B 319 GLY ALA GLY ALA GLY MET PHE ARG ALA LEU PHE ARG GLN SEQRES 4 B 319 ALA VAL GLU ASP ASP ARG TYR GLY GLU PHE LEU ASP VAL SEQRES 5 B 319 LEU ALA GLU ALA SER ALA PHE ARG PRO GLN PHE ALA SER SEQRES 6 B 319 PRO GLU ALA CYS SER GLU ARG LEU ASP PRO VAL LEU LEU SEQRES 7 B 319 ALA GLY GLY PRO THR ASP ARG ALA GLU GLY ARG ALA VAL SEQRES 8 B 319 LEU VAL GLY CYS THR GLY THR ALA ALA ASN GLY GLY PRO SEQRES 9 B 319 HIS GLU PHE LEU ARG LEU SER THR SER PHE GLN GLU GLU SEQRES 10 B 319 ARG ASP PHE LEU ALA VAL PRO LEU PRO GLY TYR GLY THR SEQRES 11 B 319 GLY THR GLY THR GLY THR ALA LEU LEU PRO ALA ASP LEU SEQRES 12 B 319 ASP THR ALA LEU ASP ALA GLN ALA ARG ALA ILE LEU ARG SEQRES 13 B 319 ALA ALA GLY ASP ALA PRO VAL VAL LEU LEU GLY HIS SER SEQRES 14 B 319 GLY GLY ALA LEU LEU ALA HIS GLU LEU ALA PHE ARG LEU SEQRES 15 B 319 GLU ARG ALA HIS GLY ALA PRO PRO ALA GLY ILE VAL LEU SEQRES 16 B 319 VAL ASP PRO TYR PRO PRO GLY HIS GLN GLU PRO ILE GLU SEQRES 17 B 319 VAL TRP SER ARG GLN LEU GLY GLU GLY LEU PHE ALA GLY SEQRES 18 B 319 GLU LEU GLU PRO MET SER ASP ALA ARG LEU LEU ALA MET SEQRES 19 B 319 GLY ARG TYR ALA ARG PHE LEU ALA GLY PRO ARG PRO GLY SEQRES 20 B 319 ARG SER SER ALA PRO VAL LEU LEU VAL ARG ALA SER GLU SEQRES 21 B 319 PRO LEU GLY ASP TRP GLN GLU GLU ARG GLY ASP TRP ARG SEQRES 22 B 319 ALA HIS TRP ASP LEU PRO HIS THR VAL ALA ASP VAL PRO SEQRES 23 B 319 GLY ASP HIS PHE THR MET MET ARG ASP HIS ALA PRO ALA SEQRES 24 B 319 VAL ALA GLU ALA VAL LEU SER TRP LEU ASP ALA ILE GLU SEQRES 25 B 319 GLY ILE GLU GLY ALA GLY LYS HET SO4 A 502 5 HET SO4 A 504 5 HET MG A 509 1 HET YML A 448 17 HET SO4 B 501 5 HET DMS B 503 4 HET DMS B2036 4 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETNAM YML [(3R,4S,5S,7R)-4,8-DIHYDROXY-3,5,7-TRIMETHYL-2- HETNAM 2 YML OXOOCTYL]PHOSPHONIC ACID HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 SO4 3(O4 S 2-) FORMUL 5 MG MG 2+ FORMUL 6 YML C11 H23 O5 P FORMUL 8 DMS 2(C2 H6 O S) FORMUL 10 HOH *405(H2 O) HELIX 1 1 GLY A 10 ASP A 22 1 13 HELIX 2 2 ARG A 24 ALA A 37 1 14 HELIX 3 3 SER A 44 CYS A 48 5 5 HELIX 4 4 PHE A 86 SER A 92 1 7 HELIX 5 5 ASP A 121 GLY A 138 1 18 HELIX 6 6 SER A 148 HIS A 165 1 18 HELIX 7 7 GLN A 183 TRP A 189 1 7 HELIX 8 8 TRP A 189 GLY A 200 1 12 HELIX 9 9 SER A 206 GLY A 222 1 17 HELIX 10 10 GLN A 245 GLY A 249 5 5 HELIX 11 11 PHE A 269 ASP A 274 1 6 HELIX 12 12 HIS A 275 GLY A 292 1 18 HELIX 13 13 GLY B 10 ASP B 22 1 13 HELIX 14 14 ARG B 24 ALA B 37 1 14 HELIX 15 15 SER B 44 CYS B 48 5 5 HELIX 16 16 PHE B 86 THR B 91 1 6 HELIX 17 17 SER B 92 GLN B 94 5 3 HELIX 18 18 ASP B 121 GLY B 138 1 18 HELIX 19 19 SER B 148 GLY B 166 1 19 HELIX 20 20 GLN B 183 TRP B 189 1 7 HELIX 21 21 TRP B 189 GLY B 200 1 12 HELIX 22 22 SER B 206 GLY B 222 1 17 HELIX 23 23 GLN B 245 GLY B 249 5 5 HELIX 24 24 PHE B 269 ARG B 273 5 5 HELIX 25 25 HIS B 275 GLU B 291 1 17 SHEET 1 A 2 GLN A 41 PHE A 42 0 SHEET 2 A 2 LEU A 118 PRO A 119 1 O LEU A 118 N PHE A 42 SHEET 1 B 7 VAL A 55 ALA A 58 0 SHEET 2 B 7 PHE A 99 VAL A 102 -1 O PHE A 99 N LEU A 57 SHEET 3 B 7 VAL A 70 CYS A 74 1 N GLY A 73 O LEU A 100 SHEET 4 B 7 VAL A 142 HIS A 147 1 O LEU A 145 N CYS A 74 SHEET 5 B 7 GLY A 171 VAL A 175 1 O VAL A 173 N LEU A 144 SHEET 6 B 7 VAL A 232 ALA A 237 1 O LEU A 233 N LEU A 174 SHEET 7 B 7 THR A 260 VAL A 264 1 O ALA A 262 N LEU A 234 SHEET 1 C 2 GLN B 41 PHE B 42 0 SHEET 2 C 2 LEU B 118 PRO B 119 1 O LEU B 118 N PHE B 42 SHEET 1 D 7 VAL B 55 ALA B 58 0 SHEET 2 D 7 PHE B 99 VAL B 102 -1 O ALA B 101 N VAL B 55 SHEET 3 D 7 VAL B 70 CYS B 74 1 N GLY B 73 O LEU B 100 SHEET 4 D 7 VAL B 142 HIS B 147 1 O LEU B 145 N CYS B 74 SHEET 5 D 7 GLY B 171 VAL B 175 1 O VAL B 173 N LEU B 144 SHEET 6 D 7 VAL B 232 ALA B 237 1 O LEU B 233 N LEU B 174 SHEET 7 D 7 THR B 260 VAL B 264 1 O ALA B 262 N LEU B 234 LINK OG SER A 148 P1 YML A 448 1555 1555 1.59 LINK MG MG A 509 OD1 ASP A 256 1555 1555 2.48 LINK MG MG A 509 O HOH A 561 1555 1555 2.54 LINK MG MG A 509 OD1 ASP A 256 1555 2665 3.01 LINK MG MG A 509 NE2 HIS A 254 1555 2665 3.09 CISPEP 1 THR B 62 ASP B 63 0 -9.25 SITE 1 AC1 4 ARG A 24 ALA B 37 GLN B 41 ARG B 215 SITE 1 AC2 4 ALA A 37 GLN A 41 ARG A 215 ARG B 24 SITE 1 AC3 3 ARG A 248 GLU B 246 GLU B 247 SITE 1 AC4 3 HIS A 254 ASP A 256 HOH A 561 SITE 1 AC5 5 PRO B 179 ARG B 227 HIS B 254 TRP B 255 SITE 2 AC5 5 ASP B 256 SITE 1 AC6 4 GLN A 192 ASP A 243 HOH A 514 ARG B 191 SITE 1 AC7 12 TYR A 25 LEU A 29 THR A 77 ALA A 78 SITE 2 AC7 12 SER A 148 GLY A 149 MET A 213 HIS A 268 SITE 3 AC7 12 HOH A 541 HOH A 586 HOH A 685 HOH A 698 CRYST1 107.686 131.063 56.864 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009286 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007630 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017586 0.00000