HEADER TRANSCRIPTION 28-JUN-06 2HI3 TITLE SOLUTION STRUCTURE OF THE HOMEODOMAIN-ONLY PROTEIN HOP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMEODOMAIN-ONLY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HOP, HOMEOBOX-ONLY PROTEIN, ODD HOMEOBOX PROTEIN 1, MOB1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS HOMEODOMAIN, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.P.MACKAY,H.KOOK,J.A.EPSTEIN,R.J.SIMPSON,W.W.YUNG REVDAT 3 09-MAR-22 2HI3 1 REMARK REVDAT 2 24-FEB-09 2HI3 1 VERSN REVDAT 1 02-JAN-07 2HI3 0 JRNL AUTH H.KOOK,W.W.YUNG,R.J.SIMPSON,H.J.KEE,S.SHIN,J.A.LOWRY, JRNL AUTH 2 F.E.LOUGHLIN,Z.YIN,J.A.EPSTEIN,J.P.MACKAY JRNL TITL ANALYSIS OF THE STRUCTURE AND FUNCTION OF THE JRNL TITL 2 TRANSCRIPTIONAL COREGULATOR HOP JRNL REF BIOCHEMISTRY V. 45 10584 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 16939210 JRNL DOI 10.1021/BI060641S REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, ARIA 1.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE IS BASED ON 783 NOES, 144 REMARK 3 TALOS-DERIVED ANGLE CONSTRAINTS, AND 48 DIHEDRAL ANGLE REMARK 3 CONSTRAINTS DERIVED FROM AN HNHA. REMARK 4 REMARK 4 2HI3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038371. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 50MM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5MM HOP U-15N, 13C; 50MM REMARK 210 PHOSPHATE BUFFER; 0.5MM TCEP; PH REMARK 210 6.5-6.9, 90% H2O, 10% D2O; 1.0MM REMARK 210 HOP U-15N; 50MM PHOSPHATE BUFFER; REMARK 210 0.5MM TCEP; PH 6.5-6.9, 90% H2O, REMARK 210 10% D2O; 1.5MM HOP; 50MM REMARK 210 PHOSPHATE BUFFER; 0.5MM TCEP; PH REMARK 210 6.5-6.9, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D AND 3D REMARK 210 HOMONUCLEAR AND TRIPLE RESONANCE TECHNIQUES. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 7 -47.84 74.23 REMARK 500 1 VAL A 24 -75.72 -68.00 REMARK 500 1 ASN A 25 15.24 -177.82 REMARK 500 1 SER A 66 -132.44 66.56 REMARK 500 1 GLU A 67 -63.03 -101.17 REMARK 500 2 THR A 5 35.74 -90.57 REMARK 500 2 SER A 66 136.10 -172.57 REMARK 500 3 THR A 5 27.60 -77.22 REMARK 500 3 PRO A 65 85.75 -67.07 REMARK 500 3 GLU A 67 -145.53 -97.35 REMARK 500 3 CYS A 68 39.68 -83.68 REMARK 500 4 GLN A 4 -168.48 -108.23 REMARK 500 4 VAL A 24 -98.12 -99.75 REMARK 500 4 ASN A 25 26.22 -150.58 REMARK 500 4 LYS A 26 -56.88 68.25 REMARK 500 4 PRO A 65 26.54 -72.81 REMARK 500 4 CYS A 68 -153.50 58.81 REMARK 500 5 SER A 2 30.75 -90.71 REMARK 500 5 ALA A 3 -70.96 -93.50 REMARK 500 5 SER A 7 -17.07 70.65 REMARK 500 5 VAL A 24 -80.92 -116.53 REMARK 500 5 ASN A 25 20.43 -161.55 REMARK 500 5 LYS A 26 -67.10 67.77 REMARK 500 5 PRO A 65 48.30 -70.91 REMARK 500 5 SER A 66 -82.99 -169.73 REMARK 500 5 GLU A 67 -93.07 -171.33 REMARK 500 6 SER A 2 -88.64 59.40 REMARK 500 6 ALA A 3 -128.24 54.44 REMARK 500 6 VAL A 24 -76.43 -66.02 REMARK 500 6 ASN A 25 4.45 -164.88 REMARK 500 6 SER A 66 -72.94 -114.08 REMARK 500 6 CYS A 68 -150.81 60.16 REMARK 500 7 THR A 5 -141.68 -127.54 REMARK 500 7 LYS A 26 -153.79 -94.63 REMARK 500 7 PRO A 28 56.30 -66.76 REMARK 500 7 GLU A 67 -86.33 -86.72 REMARK 500 8 THR A 5 68.17 -111.63 REMARK 500 8 ASN A 25 48.37 75.43 REMARK 500 8 LYS A 26 -55.72 73.36 REMARK 500 8 PRO A 65 -150.13 -89.12 REMARK 500 8 SER A 66 -72.92 -114.83 REMARK 500 9 ALA A 3 -83.66 68.83 REMARK 500 9 VAL A 6 73.47 -107.97 REMARK 500 9 VAL A 24 -70.83 -114.97 REMARK 500 9 ASN A 25 96.32 60.31 REMARK 500 9 LYS A 26 -158.16 -132.56 REMARK 500 9 PRO A 28 100.84 -53.30 REMARK 500 9 PRO A 65 109.30 -52.03 REMARK 500 9 SER A 66 37.60 -93.58 REMARK 500 9 GLU A 67 58.99 -159.20 REMARK 500 REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2HI3 A 1 73 UNP Q8R1H0 HOP_MOUSE 1 73 SEQADV 2HI3 VAL A 6 UNP Q8R1H0 ALA 6 SEE REMARK 999 SEQRES 1 A 73 MET SER ALA GLN THR VAL SER GLY PRO THR GLU ASP GLN SEQRES 2 A 73 VAL GLU ILE LEU GLU TYR ASN PHE ASN LYS VAL ASN LYS SEQRES 3 A 73 HIS PRO ASP PRO THR THR LEU CYS LEU ILE ALA ALA GLU SEQRES 4 A 73 ALA GLY LEU THR GLU GLU GLN THR GLN LYS TRP PHE LYS SEQRES 5 A 73 GLN ARG LEU ALA GLU TRP ARG ARG SER GLU GLY LEU PRO SEQRES 6 A 73 SER GLU CYS ARG SER VAL THR ASP HELIX 1 1 THR A 10 VAL A 24 1 15 HELIX 2 2 ASP A 29 GLY A 41 1 13 HELIX 3 3 THR A 43 GLY A 63 1 21 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1