HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-JUN-06 2HI6 TITLE SOLUTION NMR STRUCTURE OF UPF0107 PROTEIN AF_0055, NORTHEAST TITLE 2 STRUCTURAL GENOMICS CONSORTIUM TARGET GR101 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0107 PROTEIN AF0055; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: GR101-21.1 KEYWDS UPF0107 PROTEIN AF_0055GFT, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.LIU,H.ATREYA,D.XU,D.K.SUKUMARAN,C.X.CHEN,H.JANJUA,K.CUNNINGHAM,L.- AUTHOR 2 C.MA,R.XIAO,J.LIU,M.BARAN,G.V.T.SWAPNA,T.B.ACTON,B.ROST, AUTHOR 3 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (NESG) REVDAT 3 09-MAR-22 2HI6 1 REMARK SEQADV REVDAT 2 24-FEB-09 2HI6 1 VERSN REVDAT 1 29-AUG-06 2HI6 0 JRNL AUTH G.LIU,H.ATREYA,D.XU,D.K.SUKUMARAN,C.X.CHEN,H.JANJUA, JRNL AUTH 2 K.CUNNINGHAM,L.-C.MA,R.XIAO,J.LIU,M.BARAN,G.V.T.SWAPNA, JRNL AUTH 3 T.B.ACTON,B.ROST,G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF UPF0107 PROTEIN AF_0055, NORTHEAST JRNL TITL 2 STRUCTURAL GENOMICS CONSORTIUM TARGET GR101 (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CNS 1.1 REMARK 3 AUTHORS : BRUNGER, A.T. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2HI6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000038374. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 5-5.5MM CACL2, 100MM NACL, 20MM REMARK 210 NH4OAC, 10MM DTT, 0.02% NAN3, PH REMARK 210 5.5, 5% D2O, 95% H2O U-15N,13C REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : SIMULTANEOUS HETERONUCLEAR REMARK 210 RESOLVED [1H,1H]-NOESY; GFT (4,3) REMARK 210 D HNNCABCA; GFT (4,3)D CABCA(CO) REMARK 210 NHN; GFT (4,3)D HABCAB(CO)NHN; REMARK 210 GFT (4,3)D HCCH REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.3, AUTOASSIGN 1.15.1, REMARK 210 AUTOSTRUCTURE 2.0, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING MOLECULAR REMARK 210 DYNAMICS TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 0 REMARK 465 LEU A 133 REMARK 465 GLU A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 HIS A 137 REMARK 465 HIS A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 32 OE1 GLU A 33 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 21 -61.07 68.54 REMARK 500 1 CYS A 41 -56.23 -161.27 REMARK 500 1 GLU A 42 -51.73 -173.29 REMARK 500 1 ILE A 43 44.57 -92.05 REMARK 500 1 PRO A 100 109.70 -40.04 REMARK 500 2 THR A 9 -165.00 -109.57 REMARK 500 2 PHE A 26 31.26 -85.48 REMARK 500 2 CYS A 41 -178.22 174.55 REMARK 500 2 ALA A 49 88.04 -68.25 REMARK 500 2 SER A 65 -154.56 60.06 REMARK 500 2 TYR A 66 -56.48 72.35 REMARK 500 2 GLU A 98 59.89 71.71 REMARK 500 2 PRO A 100 107.56 -38.29 REMARK 500 3 CYS A 41 -73.65 -172.81 REMARK 500 3 GLU A 42 -51.18 -156.58 REMARK 500 3 TYR A 66 -43.76 75.58 REMARK 500 4 THR A 9 -164.25 -125.29 REMARK 500 4 SER A 65 -77.10 173.13 REMARK 500 5 LYS A 2 77.84 64.34 REMARK 500 5 CYS A 41 -49.63 -178.68 REMARK 500 5 GLU A 42 -45.98 176.20 REMARK 500 5 VAL A 48 -76.52 -74.47 REMARK 500 5 ALA A 49 81.42 46.30 REMARK 500 5 THR A 62 16.91 53.89 REMARK 500 5 TYR A 66 -21.61 -156.24 REMARK 500 6 CYS A 41 -41.20 -166.87 REMARK 500 6 ALA A 49 92.51 -67.22 REMARK 500 6 THR A 62 42.86 -83.70 REMARK 500 6 SER A 65 -161.03 52.51 REMARK 500 6 TYR A 66 -31.95 69.32 REMARK 500 6 PRO A 100 105.43 -47.89 REMARK 500 6 THR A 115 94.62 -67.87 REMARK 500 7 LYS A 2 96.86 63.74 REMARK 500 7 CYS A 41 -170.64 -174.22 REMARK 500 7 GLU A 98 72.54 65.91 REMARK 500 7 PRO A 100 110.04 -39.30 REMARK 500 8 THR A 9 -164.99 -113.13 REMARK 500 8 SER A 25 -26.81 68.57 REMARK 500 8 PHE A 26 -31.25 75.36 REMARK 500 8 CYS A 41 39.04 -170.80 REMARK 500 8 GLU A 42 -29.94 75.63 REMARK 500 8 ALA A 49 94.62 -64.87 REMARK 500 8 LYS A 59 -70.59 174.64 REMARK 500 8 SER A 61 -165.52 70.24 REMARK 500 8 THR A 62 58.12 -102.00 REMARK 500 8 SER A 65 12.76 56.43 REMARK 500 8 THR A 86 124.03 72.48 REMARK 500 8 PRO A 100 112.56 -35.30 REMARK 500 8 THR A 115 107.49 -58.40 REMARK 500 8 ASP A 117 -166.96 -101.09 REMARK 500 REMARK 500 THIS ENTRY HAS 134 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GR101 RELATED DB: TARGETDB DBREF 2HI6 A 1 132 UNP O30181 Y055_ARCFU 2 132 SEQADV 2HI6 MET A 0 UNP O30181 INITIATING METHIONINE SEQADV 2HI6 VAL A 1 UNP O30181 CLONING ARTIFACT SEQADV 2HI6 LEU A 133 UNP O30181 CLONING ARTIFACT SEQADV 2HI6 GLU A 134 UNP O30181 CLONING ARTIFACT SEQADV 2HI6 HIS A 135 UNP O30181 EXPRESSION TAG SEQADV 2HI6 HIS A 136 UNP O30181 EXPRESSION TAG SEQADV 2HI6 HIS A 137 UNP O30181 EXPRESSION TAG SEQADV 2HI6 HIS A 138 UNP O30181 EXPRESSION TAG SEQADV 2HI6 HIS A 139 UNP O30181 EXPRESSION TAG SEQADV 2HI6 HIS A 140 UNP O30181 EXPRESSION TAG SEQRES 1 A 141 MET VAL LYS PHE ALA CYS ARG ALA ILE THR ARG GLY ARG SEQRES 2 A 141 ALA GLU GLY GLU ALA LEU VAL THR LYS GLU TYR ILE SER SEQRES 3 A 141 PHE LEU GLY GLY ILE ASP LYS GLU THR GLY ILE VAL LYS SEQRES 4 A 141 GLU ASP CYS GLU ILE LYS GLY GLU SER VAL ALA GLY ARG SEQRES 5 A 141 ILE LEU VAL PHE PRO GLY GLY LYS GLY SER THR VAL GLY SEQRES 6 A 141 SER TYR VAL LEU LEU ASN LEU ARG LYS ASN GLY VAL ALA SEQRES 7 A 141 PRO LYS ALA ILE ILE ASN LYS LYS THR GLU THR ILE ILE SEQRES 8 A 141 ALA VAL GLY ALA ALA MET ALA GLU ILE PRO LEU VAL GLU SEQRES 9 A 141 VAL ARG ASP GLU LYS PHE PHE GLU ALA VAL LYS THR GLY SEQRES 10 A 141 ASP ARG VAL VAL VAL ASN ALA ASP GLU GLY TYR VAL GLU SEQRES 11 A 141 LEU ILE GLU LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 TYR A 66 GLY A 75 1 10 HELIX 2 2 GLU A 87 GLU A 98 1 12 HELIX 3 3 GLU A 107 VAL A 113 1 7 SHEET 1 A 8 LYS A 2 ALA A 4 0 SHEET 2 A 8 TYR A 127 ILE A 131 -1 O VAL A 128 N PHE A 3 SHEET 3 A 8 ARG A 118 ASN A 122 -1 N VAL A 120 O GLU A 129 SHEET 4 A 8 ARG A 12 VAL A 19 -1 N ALA A 13 O VAL A 121 SHEET 5 A 8 ILE A 52 PHE A 55 1 O ILE A 52 N LEU A 18 SHEET 6 A 8 ALA A 80 ASN A 83 1 O ALA A 80 N LEU A 53 SHEET 7 A 8 LEU A 101 GLU A 103 1 O VAL A 102 N ASN A 83 SHEET 8 A 8 ARG A 6 ALA A 7 -1 N ARG A 6 O GLU A 103 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1