data_2HKC # _entry.id 2HKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HKC pdb_00002hkc 10.2210/pdb2hkc/pdb RCSB RCSB038444 ? ? WWPDB D_1000038444 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2HKB _pdbx_database_related.details 'unmodified duplex' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HKC _pdbx_database_status.recvd_initial_deposition_date 2006-07-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, F.' 1 'DeMuro, N.E.' 2 'Elmquist, C.E.' 3 'Stover, J.S.' 4 'Rizzo, C.J.' 5 'Stone, M.P.' 6 # _citation.id primary _citation.title ;Base-displaced intercalated structure of the food mutagen 2-amino-3-methylimidazo[4,5-f]quinoline in the recognition sequence of the NarI restriction enzyme, a hotspot for -2 bp deletions. ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 128 _citation.page_first 10085 _citation.page_last 10095 _citation.year 2006 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16881637 _citation.pdbx_database_id_DOI 10.1021/ja062004v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, F.' 1 ? primary 'DeMuro, N.E.' 2 ? primary 'Elmquist, C.E.' 3 ? primary 'Stover, J.S.' 4 ? primary 'Rizzo, C.J.' 5 ? primary 'Stone, M.P.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*TP*CP*GP*GP*CP*GP*CP*CP*AP*TP*C)-3'" 3599.343 1 ? ? ? ? 2 polymer syn "5'-D(*GP*AP*TP*GP*GP*CP*GP*CP*CP*GP*AP*G)-3'" 3728.429 1 ? ? ? ? 3 non-polymer syn '3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE' 198.224 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DT)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DA)(DT)(DC)' CTCGGCGCCATC A ? 2 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DA)(DG)' GATGGCGCCGAG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DC n 1 4 DG n 1 5 DG n 1 6 DC n 1 7 DG n 1 8 DC n 1 9 DC n 1 10 DA n 1 11 DT n 1 12 DC n 2 1 DG n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DG n 2 6 DC n 2 7 DG n 2 8 DC n 2 9 DC n 2 10 DG n 2 11 DA n 2 12 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 ;The unmodified oligodeoxynucleotides 5'-d(CTCGGCGCCATC)-3' and 5'-d(GATGGCGCCGAG)-3' were obtained from the Midland Certified Reagent Company, and had been purified by anion exchange chromatography. The IQ-adducted oligodeoxynucleotide 5'-d(CTCGGCXCCATC)-3' was synthesized and purified as described in paper by Elmquist, C. Eric [J. Am. Chem. Soc., Vol. 126, No. 36, 2004]. ; 2 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 2HKC 2HKC ? ? ? 2 2 PDB 2HKC 2HKC ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HKC A 1 ? 12 ? 2HKC 1 ? 12 ? 1 12 2 2 2HKC B 1 ? 12 ? 2HKC 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GIQ non-polymer . '3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE' '2-AMINO-3-METHYLIMIDAZO[4,5-F]QUINOLINE' 'C11 H10 N4' 198.224 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 2 '2D NOESY' 1 2 2 'Magnitude COSY' 1 3 3 E-COSY 1 4 3 DQF-COSY 1 5 3 P-COSY 1 6 1 '2D NOESY' 2 # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 1 278 1 7.0 '0.1 M NaCl' atm K conditions_1 'Not defined' 'Not defined' 2 288 1 7.0 '0.1 M NaCl' atm K conditions_2 'Not defined' 'Not defined' 3 298 1 7.0 '0.1 M NaCl' atm K conditions_3 'Not defined' 'Not defined' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.7 mM modified duplex, 10 mM phosphate buffer, 0.1 M NaCl, 0.05 mM Na2EDTA, 100% D2O' '100% D2O' sample_1 solution ? 2 '0.7 mM modified duplex, 10 mM phosphate buffer, 0.1 M NaCl, 0.05 mM Na2EDTA, 90% H2O/10% D2O' '90% H2O/10% D2O' sample_2 solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 'AVANCE III' Bruker 800 ? 2 'AVANCE III' Bruker 600 ? 3 'AVANCE III' Bruker 500 ? # _pdbx_nmr_refine.entry_id 2HKC _pdbx_nmr_refine.method ;simulated annealing restrained molecular dynamics ; _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2HKC _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques' # _pdbx_nmr_ensemble.entry_id 2HKC _pdbx_nmr_ensemble.conformers_calculated_total_number 12 _pdbx_nmr_ensemble.conformers_submitted_total_number 8 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2HKC _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average structure' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.1 Brunger 1 processing Felix 95.0 'Accelrys Software Inc.' 2 'iterative matrix relaxation' MARDIGRAS 5.2 Borgias 3 'iterative matrix relaxation' CORMA 5.2 Keepers 4 # _exptl.entry_id 2HKC _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2HKC _struct.title 'NMR Structure of the IQ-modified Dodecamer CTCGGC[IQ]GCCATC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HKC _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Nar1IQ3, rMD calculations, Anneal, NOESY, COSY, Refinement, IQ, Adduct, HCA, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A DG 7 C8 ? ? ? 1_555 C GIQ . N10 ? ? A DG 7 A GIQ 25 1_555 ? ? ? ? ? ? ? 1.431 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 11 N1 ? ? A DT 2 B DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 11 N6 ? ? A DT 2 B DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 5 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 6 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 6 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 6 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 8 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 10 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 10 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 11 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 11 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GIQ _struct_site.pdbx_auth_seq_id 25 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE GIQ A 25' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DG A 7 ? DG A 7 . ? 1_555 ? 2 AC1 5 DC A 8 ? DC A 8 . ? 1_555 ? 3 AC1 5 DG B 5 ? DG B 17 . ? 1_555 ? 4 AC1 5 DC B 6 ? DC B 18 . ? 1_555 ? 5 AC1 5 DG B 7 ? DG B 19 . ? 1_555 ? # _database_PDB_matrix.entry_id 2HKC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HKC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DT 2 2 2 DT T A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DA 10 10 10 DA A A . n A 1 11 DT 11 11 11 DT T A . n A 1 12 DC 12 12 12 DC C A . n B 2 1 DG 1 13 13 DG G B . n B 2 2 DA 2 14 14 DA A B . n B 2 3 DT 3 15 15 DT T B . n B 2 4 DG 4 16 16 DG G B . n B 2 5 DG 5 17 17 DG G B . n B 2 6 DC 6 18 18 DC C B . n B 2 7 DG 7 19 19 DG G B . n B 2 8 DC 8 20 20 DC C B . n B 2 9 DC 9 21 21 DC C B . n B 2 10 DG 10 22 22 DG G B . n B 2 11 DA 11 23 23 DA A B . n B 2 12 DG 12 24 24 DG G B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id GIQ _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 25 _pdbx_nonpoly_scheme.auth_seq_num 25 _pdbx_nonpoly_scheme.pdb_mon_id GIQ _pdbx_nonpoly_scheme.auth_mon_id IQ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-03 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Experimental preparation' 7 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' diffrn 3 4 'Structure model' diffrn_radiation 4 4 'Structure model' diffrn_radiation_wavelength 5 4 'Structure model' pdbx_entity_src_syn 6 4 'Structure model' pdbx_nmr_ensemble 7 4 'Structure model' pdbx_nmr_exptl_sample 8 4 'Structure model' pdbx_nmr_exptl_sample_conditions 9 4 'Structure model' pdbx_nmr_sample_details 10 4 'Structure model' pdbx_nmr_software 11 4 'Structure model' pdbx_nmr_spectrometer 12 4 'Structure model' pdbx_struct_assembly 13 4 'Structure model' pdbx_struct_oper_list 14 4 'Structure model' struct_conn 15 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_ensemble.conformer_selection_criteria' 4 4 'Structure model' '_pdbx_nmr_exptl_sample_conditions.ionic_strength_units' 5 4 'Structure model' '_pdbx_nmr_exptl_sample_conditions.label' 6 4 'Structure model' '_pdbx_nmr_exptl_sample_conditions.pH_units' 7 4 'Structure model' '_pdbx_nmr_sample_details.contents' 8 4 'Structure model' '_pdbx_nmr_sample_details.label' 9 4 'Structure model' '_pdbx_nmr_sample_details.solvent_system' 10 4 'Structure model' '_pdbx_nmr_sample_details.type' 11 4 'Structure model' '_pdbx_nmr_software.authors' 12 4 'Structure model' '_pdbx_nmr_software.name' 13 4 'Structure model' '_pdbx_nmr_spectrometer.model' 14 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 15 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'modified duplex' 0.7 ? mM 'natural abundance' 1 'phosphate buffer' 10 ? mM 'natural abundance' 1 NaCl 0.1 ? mM 'natural abundance' 1 Na2EDTA 0.05 ? mM 'natural abundance' 1 'modified duplex' 0.7 ? mM 'natural abundance' 2 'phosphate buffer' 10 ? mM 'natural abundance' 2 NaCl 0.1 ? mM 'natural abundance' 2 Na2EDTA 0.05 ? mM 'natural abundance' 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.13 2 2 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 3 3 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 4 4 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 5 5 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 6 6 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 7 7 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.13 8 8 N7 A DG 7 ? ? N10 A GIQ 25 ? ? 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.575 1.512 0.063 0.007 N 2 1 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.334 1.378 -0.044 0.007 N 3 1 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.454 1.518 -0.064 0.010 N 4 2 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.578 1.512 0.066 0.007 N 5 2 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.333 1.378 -0.045 0.007 N 6 2 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.455 1.518 -0.063 0.010 N 7 3 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.575 1.512 0.063 0.007 N 8 3 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.333 1.378 -0.045 0.007 N 9 3 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.454 1.518 -0.064 0.010 N 10 4 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.576 1.512 0.064 0.007 N 11 4 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.333 1.378 -0.045 0.007 N 12 4 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.454 1.518 -0.064 0.010 N 13 5 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.576 1.512 0.064 0.007 N 14 5 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.332 1.378 -0.046 0.007 N 15 5 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.455 1.518 -0.063 0.010 N 16 6 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.576 1.512 0.064 0.007 N 17 6 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.333 1.378 -0.045 0.007 N 18 6 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.455 1.518 -0.063 0.010 N 19 7 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.575 1.512 0.063 0.007 N 20 7 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.334 1.378 -0.044 0.007 N 21 7 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.455 1.518 -0.063 0.010 N 22 8 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? 1.575 1.512 0.063 0.007 N 23 8 C6 A DT 2 ? ? N1 A DT 2 ? ? 1.333 1.378 -0.045 0.007 N 24 8 "C2'" B DA 23 ? ? "C1'" B DA 23 ? ? 1.455 1.518 -0.063 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.03 108.30 3.73 0.30 N 2 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.43 108.30 2.13 0.30 N 3 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.85 108.30 2.55 0.30 N 4 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.40 108.30 3.10 0.30 N 5 1 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.87 113.10 4.77 0.50 N 6 1 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.86 106.40 -2.54 0.40 N 7 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.66 108.30 3.36 0.30 N 8 1 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.96 113.10 4.86 0.50 N 9 1 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.87 106.40 -2.53 0.40 N 10 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.74 108.30 2.44 0.30 N 11 1 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.78 106.40 -2.62 0.40 N 12 1 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.00 113.80 4.20 0.50 N 13 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.79 108.30 2.49 0.30 N 14 1 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.42 108.30 2.12 0.30 N 15 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.24 108.30 1.94 0.30 N 16 1 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.63 113.10 4.53 0.50 N 17 1 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 103.95 106.40 -2.45 0.40 N 18 1 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.62 113.80 3.82 0.50 N 19 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.27 108.30 3.97 0.30 N 20 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.18 108.30 2.88 0.30 N 21 1 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.63 113.10 4.53 0.50 N 22 1 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.87 106.40 -2.53 0.40 N 23 1 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.81 108.30 6.51 0.30 N 24 1 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.69 113.10 4.59 0.50 N 25 1 C8 B DG 17 ? ? N9 B DG 17 ? ? C4 B DG 17 ? ? 103.98 106.40 -2.42 0.40 N 26 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.95 108.30 2.65 0.30 N 27 1 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.00 108.30 4.70 0.30 N 28 1 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.15 113.10 4.05 0.50 N 29 1 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.36 106.40 -3.04 0.40 N 30 1 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.62 113.10 4.52 0.50 N 31 1 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.17 108.30 2.87 0.30 N 32 1 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.11 113.80 4.31 0.50 N 33 1 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.68 113.10 4.58 0.50 N 34 1 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.93 106.40 -2.47 0.40 N 35 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.03 108.30 3.73 0.30 N 36 2 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.37 108.30 2.07 0.30 N 37 2 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.72 108.30 2.42 0.30 N 38 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.49 108.30 3.19 0.30 N 39 2 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.86 113.10 4.76 0.50 N 40 2 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.91 106.40 -2.49 0.40 N 41 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.74 108.30 3.44 0.30 N 42 2 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.87 113.10 4.77 0.50 N 43 2 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.94 106.40 -2.46 0.40 N 44 2 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.80 108.30 2.50 0.30 N 45 2 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.77 106.40 -2.63 0.40 N 46 2 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.04 113.80 4.24 0.50 N 47 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.83 108.30 2.53 0.30 N 48 2 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.38 108.30 2.08 0.30 N 49 2 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.37 108.30 2.07 0.30 N 50 2 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.60 113.10 4.50 0.50 N 51 2 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.63 113.80 3.83 0.50 N 52 2 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.26 108.30 3.96 0.30 N 53 2 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.10 108.30 2.80 0.30 N 54 2 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.62 113.10 4.52 0.50 N 55 2 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.87 106.40 -2.53 0.40 N 56 2 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.94 108.30 6.64 0.30 N 57 2 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.27 104.30 -3.03 0.50 N 58 2 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.72 113.10 4.62 0.50 N 59 2 C8 B DG 17 ? ? N9 B DG 17 ? ? C4 B DG 17 ? ? 103.98 106.40 -2.42 0.40 N 60 2 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.87 108.30 2.57 0.30 N 61 2 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.05 108.30 4.75 0.30 N 62 2 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.20 113.10 4.10 0.50 N 63 2 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.32 106.40 -3.08 0.40 N 64 2 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.70 113.10 4.60 0.50 N 65 2 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.17 108.30 2.87 0.30 N 66 2 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.06 113.80 4.26 0.50 N 67 2 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.69 113.10 4.59 0.50 N 68 2 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.92 106.40 -2.48 0.40 N 69 3 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.07 108.30 3.77 0.30 N 70 3 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.36 108.30 2.06 0.30 N 71 3 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.72 108.30 2.42 0.30 N 72 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.62 108.30 3.32 0.30 N 73 3 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.88 113.10 4.78 0.50 N 74 3 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.88 106.40 -2.52 0.40 N 75 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.78 108.30 3.48 0.30 N 76 3 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.97 113.10 4.87 0.50 N 77 3 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.88 106.40 -2.52 0.40 N 78 3 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.83 108.30 2.53 0.30 N 79 3 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.79 106.40 -2.61 0.40 N 80 3 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.10 113.80 4.30 0.50 N 81 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.83 108.30 2.53 0.30 N 82 3 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.41 108.30 2.11 0.30 N 83 3 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.18 108.30 1.88 0.30 N 84 3 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.59 113.10 4.49 0.50 N 85 3 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.63 113.80 3.83 0.50 N 86 3 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.22 108.30 3.92 0.30 N 87 3 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.35 108.30 3.05 0.30 N 88 3 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.63 113.10 4.53 0.50 N 89 3 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.80 106.40 -2.60 0.40 N 90 3 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.92 108.30 6.62 0.30 N 91 3 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.22 104.30 -3.08 0.50 N 92 3 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.75 113.10 4.65 0.50 N 93 3 C8 B DG 17 ? ? N9 B DG 17 ? ? C4 B DG 17 ? ? 103.94 106.40 -2.46 0.40 N 94 3 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.90 108.30 2.60 0.30 N 95 3 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.13 108.30 4.83 0.30 N 96 3 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.21 113.10 4.11 0.50 N 97 3 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.28 106.40 -3.12 0.40 N 98 3 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.66 113.10 4.56 0.50 N 99 3 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.21 108.30 2.91 0.30 N 100 3 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.03 113.80 4.23 0.50 N 101 3 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.71 113.10 4.61 0.50 N 102 3 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.91 106.40 -2.49 0.40 N 103 4 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.01 108.30 3.71 0.30 N 104 4 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.35 108.30 2.05 0.30 N 105 4 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.76 108.30 2.46 0.30 N 106 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.49 108.30 3.19 0.30 N 107 4 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.86 113.10 4.76 0.50 N 108 4 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.91 106.40 -2.49 0.40 N 109 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.64 108.30 3.34 0.30 N 110 4 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.88 113.10 4.78 0.50 N 111 4 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.91 106.40 -2.49 0.40 N 112 4 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.80 108.30 2.50 0.30 N 113 4 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.77 106.40 -2.63 0.40 N 114 4 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.04 113.80 4.24 0.50 N 115 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.71 108.30 2.41 0.30 N 116 4 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.34 108.30 2.04 0.30 N 117 4 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.15 108.30 1.85 0.30 N 118 4 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.62 113.10 4.52 0.50 N 119 4 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 103.99 106.40 -2.41 0.40 N 120 4 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.62 113.80 3.82 0.50 N 121 4 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.16 108.30 3.86 0.30 N 122 4 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.15 108.30 2.85 0.30 N 123 4 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.63 113.10 4.53 0.50 N 124 4 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.86 106.40 -2.54 0.40 N 125 4 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.88 108.30 6.58 0.30 N 126 4 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.21 104.30 -3.09 0.50 N 127 4 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.74 113.10 4.64 0.50 N 128 4 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.88 108.30 2.58 0.30 N 129 4 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.04 108.30 4.74 0.30 N 130 4 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.11 113.10 4.01 0.50 N 131 4 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.39 106.40 -3.01 0.40 N 132 4 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.68 113.10 4.58 0.50 N 133 4 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.21 108.30 2.91 0.30 N 134 4 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.11 113.80 4.31 0.50 N 135 4 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.71 113.10 4.61 0.50 N 136 4 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.94 106.40 -2.46 0.40 N 137 5 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.00 108.30 3.70 0.30 N 138 5 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.48 108.30 2.18 0.30 N 139 5 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.79 108.30 2.49 0.30 N 140 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.50 108.30 3.20 0.30 N 141 5 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.88 113.10 4.78 0.50 N 142 5 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.85 106.40 -2.55 0.40 N 143 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.75 108.30 3.45 0.30 N 144 5 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.96 113.10 4.86 0.50 N 145 5 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.92 106.40 -2.48 0.40 N 146 5 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.73 108.30 2.43 0.30 N 147 5 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.78 106.40 -2.62 0.40 N 148 5 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.05 113.80 4.25 0.50 N 149 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.80 108.30 2.50 0.30 N 150 5 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.36 108.30 2.06 0.30 N 151 5 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.21 108.30 1.91 0.30 N 152 5 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.62 113.10 4.52 0.50 N 153 5 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.59 113.80 3.79 0.50 N 154 5 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.29 108.30 3.99 0.30 N 155 5 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.23 108.30 2.93 0.30 N 156 5 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.65 113.10 4.55 0.50 N 157 5 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.84 106.40 -2.56 0.40 N 158 5 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.94 108.30 6.64 0.30 N 159 5 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.24 104.30 -3.06 0.50 N 160 5 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.68 113.10 4.58 0.50 N 161 5 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.87 108.30 2.57 0.30 N 162 5 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.72 108.30 4.42 0.30 N 163 5 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.16 113.10 4.06 0.50 N 164 5 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.33 106.40 -3.07 0.40 N 165 5 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.66 113.10 4.56 0.50 N 166 5 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.17 108.30 2.87 0.30 N 167 5 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.04 113.80 4.24 0.50 N 168 5 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.70 113.10 4.60 0.50 N 169 5 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.95 106.40 -2.45 0.40 N 170 6 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.01 108.30 3.71 0.30 N 171 6 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.36 108.30 2.06 0.30 N 172 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.85 108.30 2.55 0.30 N 173 6 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.32 108.30 3.02 0.30 N 174 6 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.88 113.10 4.78 0.50 N 175 6 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.84 106.40 -2.56 0.40 N 176 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.57 108.30 3.27 0.30 N 177 6 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.91 113.10 4.81 0.50 N 178 6 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.92 106.40 -2.48 0.40 N 179 6 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.82 108.30 2.52 0.30 N 180 6 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.81 106.40 -2.59 0.40 N 181 6 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 117.99 113.80 4.19 0.50 N 182 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.90 108.30 2.60 0.30 N 183 6 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.41 108.30 2.11 0.30 N 184 6 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.27 108.30 1.97 0.30 N 185 6 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.64 113.10 4.54 0.50 N 186 6 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 103.98 106.40 -2.42 0.40 N 187 6 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.59 113.80 3.79 0.50 N 188 6 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.27 108.30 3.97 0.30 N 189 6 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.53 108.30 3.23 0.30 N 190 6 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.58 113.10 4.48 0.50 N 191 6 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.85 106.40 -2.55 0.40 N 192 6 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.98 108.30 6.68 0.30 N 193 6 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.26 104.30 -3.04 0.50 N 194 6 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.71 113.10 4.61 0.50 N 195 6 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.89 108.30 2.59 0.30 N 196 6 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.07 108.30 4.77 0.30 N 197 6 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.13 113.10 4.03 0.50 N 198 6 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.41 106.40 -2.99 0.40 N 199 6 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.73 113.10 4.63 0.50 N 200 6 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.16 108.30 2.86 0.30 N 201 6 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.14 113.80 4.34 0.50 N 202 6 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.65 113.10 4.55 0.50 N 203 6 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.99 106.40 -2.41 0.40 N 204 7 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.99 108.30 3.69 0.30 N 205 7 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.43 108.30 2.13 0.30 N 206 7 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.78 108.30 2.48 0.30 N 207 7 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.51 108.30 3.21 0.30 N 208 7 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.84 113.10 4.74 0.50 N 209 7 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.90 106.40 -2.50 0.40 N 210 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.76 108.30 3.46 0.30 N 211 7 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.92 113.10 4.82 0.50 N 212 7 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.91 106.40 -2.49 0.40 N 213 7 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.81 108.30 2.51 0.30 N 214 7 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.75 106.40 -2.65 0.40 N 215 7 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.08 113.80 4.28 0.50 N 216 7 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.85 108.30 2.55 0.30 N 217 7 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.37 108.30 2.07 0.30 N 218 7 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.25 108.30 1.95 0.30 N 219 7 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.63 113.10 4.53 0.50 N 220 7 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 103.99 106.40 -2.41 0.40 N 221 7 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.61 113.80 3.81 0.50 N 222 7 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.24 108.30 3.94 0.30 N 223 7 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.35 108.30 3.05 0.30 N 224 7 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.64 113.10 4.54 0.50 N 225 7 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.86 106.40 -2.54 0.40 N 226 7 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.81 108.30 6.51 0.30 N 227 7 C5 B DG 17 ? ? N7 B DG 17 ? ? C8 B DG 17 ? ? 101.26 104.30 -3.04 0.50 N 228 7 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.74 113.10 4.64 0.50 N 229 7 C8 B DG 17 ? ? N9 B DG 17 ? ? C4 B DG 17 ? ? 103.99 106.40 -2.41 0.40 N 230 7 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.85 108.30 2.55 0.30 N 231 7 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.17 108.30 4.87 0.30 N 232 7 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.15 113.10 4.05 0.50 N 233 7 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.38 106.40 -3.02 0.40 N 234 7 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.67 113.10 4.57 0.50 N 235 7 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.23 108.30 2.93 0.30 N 236 7 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.09 113.80 4.29 0.50 N 237 7 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.71 113.10 4.61 0.50 N 238 7 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.95 106.40 -2.45 0.40 N 239 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.02 108.30 3.72 0.30 N 240 8 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.33 108.30 2.03 0.30 N 241 8 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.78 108.30 2.48 0.30 N 242 8 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.35 108.30 3.05 0.30 N 243 8 N7 A DG 4 ? ? C8 A DG 4 ? ? N9 A DG 4 ? ? 117.85 113.10 4.75 0.50 N 244 8 C8 A DG 4 ? ? N9 A DG 4 ? ? C4 A DG 4 ? ? 103.88 106.40 -2.52 0.40 N 245 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.78 108.30 3.48 0.30 N 246 8 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 117.97 113.10 4.87 0.50 N 247 8 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.84 106.40 -2.56 0.40 N 248 8 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.74 108.30 2.44 0.30 N 249 8 C8 A DG 7 ? ? N9 A DG 7 ? ? C4 A DG 7 ? ? 103.81 106.40 -2.59 0.40 N 250 8 N7 A DA 10 ? ? C8 A DA 10 ? ? N9 A DA 10 ? ? 118.07 113.80 4.27 0.50 N 251 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.75 108.30 2.45 0.30 N 252 8 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.39 108.30 2.09 0.30 N 253 8 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.30 108.30 2.00 0.30 N 254 8 N7 B DG 13 ? ? C8 B DG 13 ? ? N9 B DG 13 ? ? 117.66 113.10 4.56 0.50 N 255 8 C8 B DG 13 ? ? N9 B DG 13 ? ? C4 B DG 13 ? ? 103.96 106.40 -2.44 0.40 N 256 8 N7 B DA 14 ? ? C8 B DA 14 ? ? N9 B DA 14 ? ? 117.58 113.80 3.78 0.50 N 257 8 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1 B DT 15 ? ? 112.22 108.30 3.92 0.30 N 258 8 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.30 108.30 3.00 0.30 N 259 8 N7 B DG 16 ? ? C8 B DG 16 ? ? N9 B DG 16 ? ? 117.58 113.10 4.48 0.50 N 260 8 C8 B DG 16 ? ? N9 B DG 16 ? ? C4 B DG 16 ? ? 103.89 106.40 -2.51 0.40 N 261 8 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 114.99 108.30 6.69 0.30 N 262 8 N7 B DG 17 ? ? C8 B DG 17 ? ? N9 B DG 17 ? ? 117.68 113.10 4.58 0.50 N 263 8 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.84 108.30 2.54 0.30 N 264 8 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.03 108.30 4.73 0.30 N 265 8 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 117.17 113.10 4.07 0.50 N 266 8 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.35 106.40 -3.05 0.40 N 267 8 N7 B DG 22 ? ? C8 B DG 22 ? ? N9 B DG 22 ? ? 117.77 113.10 4.67 0.50 N 268 8 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 111.25 108.30 2.95 0.30 N 269 8 N7 B DA 23 ? ? C8 B DA 23 ? ? N9 B DA 23 ? ? 118.11 113.80 4.31 0.50 N 270 8 N7 B DG 24 ? ? C8 B DG 24 ? ? N9 B DG 24 ? ? 117.66 113.10 4.56 0.50 N 271 8 C8 B DG 24 ? ? N9 B DG 24 ? ? C4 B DG 24 ? ? 103.91 106.40 -2.49 0.40 N # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2HKC 'double helix' 2HKC 'b-form double helix' 2HKC 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.984 -0.387 0.063 -21.328 -5.066 1.384 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DT 2 1_555 B DA 11 1_555 -0.114 -0.088 -0.408 -3.512 -4.939 -1.554 2 A_DT2:DA23_B A 2 ? B 23 ? 20 1 1 A DC 3 1_555 B DG 10 1_555 0.485 -0.220 0.038 5.902 -0.320 -3.262 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B DC 9 1_555 -0.527 -0.246 -0.005 7.893 1.054 -3.430 4 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DG 5 1_555 B DC 8 1_555 -0.818 -0.194 0.101 3.493 3.014 -0.125 5 A_DG5:DC20_B A 5 ? B 20 ? 19 1 1 A DC 6 1_555 B DG 7 1_555 1.545 -0.644 0.096 8.793 0.476 4.262 6 A_DC6:DG19_B A 6 ? B 19 ? 19 1 1 A DC 8 1_555 B DG 5 1_555 1.169 -0.486 0.312 11.518 4.379 4.739 7 A_DC8:DG17_B A 8 ? B 17 ? 19 1 1 A DC 9 1_555 B DG 4 1_555 0.898 -0.245 0.268 -13.448 -2.833 2.155 8 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DA 10 1_555 B DT 3 1_555 -0.603 -0.244 -0.317 -13.723 2.842 -5.413 9 A_DA10:DT15_B A 10 ? B 15 ? 20 1 1 A DT 11 1_555 B DA 2 1_555 -0.247 -0.016 0.137 -7.683 -4.709 -0.288 10 A_DT11:DA14_B A 11 ? B 14 ? 20 1 1 A DC 12 1_555 B DG 1 1_555 0.325 -0.190 0.137 -4.976 -1.784 -3.472 11 A_DC12:DG13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DT 2 1_555 B DA 11 1_555 -0.147 -0.380 2.824 10.165 5.385 25.758 -1.847 2.313 2.463 11.384 -21.489 28.170 1 AA_DC1DT2:DA23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DT 2 1_555 B DA 11 1_555 A DC 3 1_555 B DG 10 1_555 0.035 -0.767 3.097 -7.194 6.143 29.956 -2.486 -1.314 2.805 11.528 13.501 31.382 2 AA_DT2DC3:DG22DA23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.272 -1.169 2.996 1.211 3.976 31.197 -2.818 0.704 2.816 7.352 -2.240 31.466 3 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DG 5 1_555 B DC 8 1_555 0.394 -1.548 3.299 -0.338 -6.257 33.515 -1.595 -0.728 3.518 -10.734 0.579 34.079 4 AA_DG4DG5:DC20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DG 5 1_555 B DC 8 1_555 A DC 6 1_555 B DG 7 1_555 0.279 -0.718 2.981 -0.531 2.760 39.829 -1.338 -0.464 2.923 4.045 0.778 39.924 5 AA_DG5DC6:DG19DC20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DC 8 1_555 B DG 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.307 -1.044 3.633 6.255 14.538 32.649 -3.814 1.413 2.828 24.171 -10.400 36.189 6 AA_DC8DC9:DG16DG17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 9 1_555 B DG 4 1_555 A DA 10 1_555 B DT 3 1_555 -0.570 -2.110 2.964 0.674 13.172 26.281 -6.311 1.235 1.717 26.920 -1.377 29.353 7 AA_DC9DA10:DT15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DA 10 1_555 B DT 3 1_555 A DT 11 1_555 B DA 2 1_555 0.011 -0.892 2.952 -2.604 -6.332 32.333 -0.572 -0.429 3.057 -11.214 4.612 33.031 8 AA_DA10DT11:DA14DT15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DT 11 1_555 B DA 2 1_555 A DC 12 1_555 B DG 1 1_555 -0.318 -1.383 2.979 -0.911 -2.534 31.445 -2.105 0.428 3.086 -4.664 1.677 31.557 9 AA_DT11DC12:DG13DA14_BB A 11 ? B 14 ? A 12 ? B 13 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name '3-METHYL-3H-IMIDAZO[4,5-F]QUINOLIN-2-AMINE' _pdbx_entity_nonpoly.comp_id GIQ #