HEADER HYDROLASE 13-JUL-06 2HO4 TITLE CRYSTAL STRUCTURE OF PROTEIN FROM MOUSE MM.236127 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING 2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: HDHD2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL834 P(RARE2); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP 16 KEYWDS HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING 2, HDHD2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, CENTER FOR EUKARYOTIC STRUCTURAL KEYWDS 3 GENOMICS, CESG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.G.MCCOY,G.E.WESENBERG,E.BITTO,G.N.PHILLIPS JR.,C.A.BINGMAN,CENTER AUTHOR 2 FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 4 14-MAR-18 2HO4 1 SEQADV REVDAT 3 18-OCT-17 2HO4 1 REMARK REVDAT 2 24-FEB-09 2HO4 1 VERSN REVDAT 1 15-AUG-06 2HO4 0 JRNL AUTH J.G.MCCOY,G.E.WESENBERG,E.BITTO,G.N.PHILLIPS JR.,C.A.BINGMAN JRNL TITL CRYSTAL STRUCTURE OF PROTEIN FROM MOUSE MM.236127 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 30651 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.044 REMARK 3 FREE R VALUE TEST SET COUNT : 1546 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1566 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3928 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.78600 REMARK 3 B22 (A**2) : 0.35400 REMARK 3 B33 (A**2) : -2.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.289 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.685 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4035 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5473 ; 1.688 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 503 ; 6.758 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;36.179 ;24.689 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 717 ;17.586 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;16.782 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 635 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2992 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1866 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2715 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 224 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.105 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.168 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.270 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2615 ; 0.861 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4064 ; 1.320 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1594 ; 2.291 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1407 ; 3.323 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HO4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038566. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30718 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4690 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.344 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, DM 5.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION (10 MG/ML REDUCTIVELY REMARK 280 METHYLATED PROTEIN, 0.050 M SODIUM CHLORIDE, 0.003 M SODIUM REMARK 280 AZIDE, 0.0003 M TCEP, 0.005 BISTRIS PH 7.0) MIXED IN A 1:1 RATIO REMARK 280 WITH THE WELL SOLUTION (0.3 M NAH2PO4, 1.7 M K2HPO4) AND REMARK 280 CRYOPROTECTED WITH FOMBLIN FOLLOWED BY PARATONE N, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.29300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.49100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.03900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 95.49100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.29300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.03900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO MONOMERS IN THE ASYMMETRIC UNIT (CHAINS A & B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ARG A 4 REMARK 465 ARG A 5 REMARK 465 GLU A 21 REMARK 465 ASP A 22 REMARK 465 ALA A 23 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ARG B 4 REMARK 465 ARG B 5 REMARK 465 ALA B 6 REMARK 465 GLU B 197 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 52 OD1 ASP B 55 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 111 29.30 -146.98 REMARK 500 PHE A 122 56.71 -94.45 REMARK 500 ASP A 209 -62.89 -91.80 REMARK 500 ALA A 230 138.06 -39.08 REMARK 500 LEU B 14 -77.90 -77.35 REMARK 500 GLU B 21 -134.44 60.77 REMARK 500 ASN B 47 36.89 -98.22 REMARK 500 GLU B 64 27.96 81.50 REMARK 500 ASP B 109 61.99 38.25 REMARK 500 PHE B 122 58.56 -92.69 REMARK 500 PRO B 180 36.49 -94.83 REMARK 500 ASP B 209 -65.54 -98.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 260 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 446 O REMARK 620 2 ASP A 13 OD2 81.2 REMARK 620 3 ASN A 15 O 127.4 82.9 REMARK 620 4 ASP A 13 OD1 85.0 48.2 118.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 15 O REMARK 620 2 ASP B 204 OD1 88.2 REMARK 620 3 HOH B 459 O 160.4 87.4 REMARK 620 4 HOH B 461 O 84.1 86.9 114.7 REMARK 620 5 ASP B 13 OD2 86.1 93.3 75.1 170.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 260 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.34556 RELATED DB: TARGETDB DBREF 2HO4 A 2 259 UNP Q6PEB2 Q6PEB2_MOUSE 2 259 DBREF 2HO4 B 2 259 UNP Q6PEB2 Q6PEB2_MOUSE 2 259 SEQADV 2HO4 SER A 1 UNP Q6PEB2 CLONING ARTIFACT SEQADV 2HO4 MSE A 41 UNP Q6PEB2 MET 41 MODIFIED RESIDUE SEQADV 2HO4 MSE A 91 UNP Q6PEB2 MET 91 MODIFIED RESIDUE SEQADV 2HO4 LEU A 94 UNP Q6PEB2 VAL 94 ENGINEERED MUTATION SEQADV 2HO4 MSE A 175 UNP Q6PEB2 MET 175 MODIFIED RESIDUE SEQADV 2HO4 MSE A 201 UNP Q6PEB2 MET 201 MODIFIED RESIDUE SEQADV 2HO4 MSE A 218 UNP Q6PEB2 MET 218 MODIFIED RESIDUE SEQADV 2HO4 SER B 1 UNP Q6PEB2 CLONING ARTIFACT SEQADV 2HO4 MSE B 41 UNP Q6PEB2 MET 41 MODIFIED RESIDUE SEQADV 2HO4 MSE B 91 UNP Q6PEB2 MET 91 MODIFIED RESIDUE SEQADV 2HO4 LEU B 94 UNP Q6PEB2 VAL 94 ENGINEERED MUTATION SEQADV 2HO4 MSE B 175 UNP Q6PEB2 MET 175 MODIFIED RESIDUE SEQADV 2HO4 MSE B 201 UNP Q6PEB2 MET 201 MODIFIED RESIDUE SEQADV 2HO4 MSE B 218 UNP Q6PEB2 MET 218 MODIFIED RESIDUE SEQRES 1 A 259 SER ALA ALA ARG ARG ALA LEU LYS ALA VAL LEU VAL ASP SEQRES 2 A 259 LEU ASN GLY THR LEU HIS ILE GLU ASP ALA ALA VAL PRO SEQRES 3 A 259 GLY ALA GLN GLU ALA LEU LYS ARG LEU ARG ALA THR SER SEQRES 4 A 259 VAL MSE VAL ARG PHE VAL THR ASN THR THR LYS GLU THR SEQRES 5 A 259 LYS LYS ASP LEU LEU GLU ARG LEU LYS LYS LEU GLU PHE SEQRES 6 A 259 GLU ILE SER GLU ASP GLU ILE PHE THR SER LEU THR ALA SEQRES 7 A 259 ALA ARG ASN LEU ILE GLU GLN LYS GLN VAL ARG PRO MSE SEQRES 8 A 259 LEU LEU LEU ASP ASP ARG ALA LEU PRO GLU PHE THR GLY SEQRES 9 A 259 VAL GLN THR GLN ASP PRO ASN ALA VAL VAL ILE GLY LEU SEQRES 10 A 259 ALA PRO GLU HIS PHE HIS TYR GLN LEU LEU ASN GLN ALA SEQRES 11 A 259 PHE ARG LEU LEU LEU ASP GLY ALA PRO LEU ILE ALA ILE SEQRES 12 A 259 HIS LYS ALA ARG TYR TYR LYS ARG LYS ASP GLY LEU ALA SEQRES 13 A 259 LEU GLY PRO GLY PRO PHE VAL THR ALA LEU GLU TYR ALA SEQRES 14 A 259 THR ASP THR LYS ALA MSE VAL VAL GLY LYS PRO GLU LYS SEQRES 15 A 259 THR PHE PHE LEU GLU ALA LEU ARG ASP ALA ASP CYS ALA SEQRES 16 A 259 PRO GLU GLU ALA VAL MSE ILE GLY ASP ASP CYS ARG ASP SEQRES 17 A 259 ASP VAL ASP GLY ALA GLN ASN ILE GLY MSE LEU GLY ILE SEQRES 18 A 259 LEU VAL LYS THR GLY LYS TYR LYS ALA ALA ASP GLU GLU SEQRES 19 A 259 LYS ILE ASN PRO PRO PRO TYR LEU THR CYS GLU SER PHE SEQRES 20 A 259 PRO HIS ALA VAL ASP HIS ILE LEU GLN HIS LEU LEU SEQRES 1 B 259 SER ALA ALA ARG ARG ALA LEU LYS ALA VAL LEU VAL ASP SEQRES 2 B 259 LEU ASN GLY THR LEU HIS ILE GLU ASP ALA ALA VAL PRO SEQRES 3 B 259 GLY ALA GLN GLU ALA LEU LYS ARG LEU ARG ALA THR SER SEQRES 4 B 259 VAL MSE VAL ARG PHE VAL THR ASN THR THR LYS GLU THR SEQRES 5 B 259 LYS LYS ASP LEU LEU GLU ARG LEU LYS LYS LEU GLU PHE SEQRES 6 B 259 GLU ILE SER GLU ASP GLU ILE PHE THR SER LEU THR ALA SEQRES 7 B 259 ALA ARG ASN LEU ILE GLU GLN LYS GLN VAL ARG PRO MSE SEQRES 8 B 259 LEU LEU LEU ASP ASP ARG ALA LEU PRO GLU PHE THR GLY SEQRES 9 B 259 VAL GLN THR GLN ASP PRO ASN ALA VAL VAL ILE GLY LEU SEQRES 10 B 259 ALA PRO GLU HIS PHE HIS TYR GLN LEU LEU ASN GLN ALA SEQRES 11 B 259 PHE ARG LEU LEU LEU ASP GLY ALA PRO LEU ILE ALA ILE SEQRES 12 B 259 HIS LYS ALA ARG TYR TYR LYS ARG LYS ASP GLY LEU ALA SEQRES 13 B 259 LEU GLY PRO GLY PRO PHE VAL THR ALA LEU GLU TYR ALA SEQRES 14 B 259 THR ASP THR LYS ALA MSE VAL VAL GLY LYS PRO GLU LYS SEQRES 15 B 259 THR PHE PHE LEU GLU ALA LEU ARG ASP ALA ASP CYS ALA SEQRES 16 B 259 PRO GLU GLU ALA VAL MSE ILE GLY ASP ASP CYS ARG ASP SEQRES 17 B 259 ASP VAL ASP GLY ALA GLN ASN ILE GLY MSE LEU GLY ILE SEQRES 18 B 259 LEU VAL LYS THR GLY LYS TYR LYS ALA ALA ASP GLU GLU SEQRES 19 B 259 LYS ILE ASN PRO PRO PRO TYR LEU THR CYS GLU SER PHE SEQRES 20 B 259 PRO HIS ALA VAL ASP HIS ILE LEU GLN HIS LEU LEU MODRES 2HO4 MSE A 41 MET SELENOMETHIONINE MODRES 2HO4 MSE A 91 MET SELENOMETHIONINE MODRES 2HO4 MSE A 175 MET SELENOMETHIONINE MODRES 2HO4 MSE A 201 MET SELENOMETHIONINE MODRES 2HO4 MSE A 218 MET SELENOMETHIONINE MODRES 2HO4 MSE B 41 MET SELENOMETHIONINE MODRES 2HO4 MSE B 91 MET SELENOMETHIONINE MODRES 2HO4 MSE B 175 MET SELENOMETHIONINE MODRES 2HO4 MSE B 201 MET SELENOMETHIONINE MODRES 2HO4 MSE B 218 MET SELENOMETHIONINE HET MSE A 41 8 HET MSE A 91 8 HET MSE A 175 8 HET MSE A 201 8 HET MSE A 218 8 HET MSE B 41 8 HET MSE B 91 8 HET MSE B 175 8 HET MSE B 201 8 HET MSE B 218 8 HET MG A 260 1 HET PO4 A 402 5 HET PO4 A 404 5 HET PO4 A 406 5 HET MG B 301 1 HET PO4 B 401 5 HET PO4 B 403 5 HET PO4 B 405 5 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 MG 2(MG 2+) FORMUL 4 PO4 6(O4 P 3-) FORMUL 11 HOH *133(H2 O) HELIX 1 GLY A 27 ALA A 37 1 11 HELIX 2 THR A 52 LEU A 63 1 12 HELIX 3 SER A 68 ASP A 70 1 3 HELIX 4 SER A 75 GLN A 87 1 13 HELIX 5 ASP A 95 THR A 103 1 9 HELIX 6 ALA A 118 PHE A 122 1 5 HELIX 7 HIS A 123 ASP A 136 1 14 HELIX 8 PRO A 159 ASP A 171 1 13 HELIX 9 GLU A 181 LEU A 189 1 9 HELIX 10 ARG A 190 ASP A 193 1 4 HELIX 11 ALA A 195 GLU A 197 1 3 HELIX 12 ASP A 209 ILE A 216 1 8 HELIX 13 ALA A 231 ILE A 236 1 6 HELIX 14 SER A 246 LEU A 258 1 13 HELIX 15 GLY B 27 ARG B 36 1 10 HELIX 16 THR B 52 LEU B 63 1 12 HELIX 17 SER B 68 ASP B 70 1 3 HELIX 18 SER B 75 GLN B 87 1 13 HELIX 19 ASP B 95 THR B 103 1 9 HELIX 20 ALA B 118 PHE B 122 1 5 HELIX 21 HIS B 123 ASP B 136 1 14 HELIX 22 PRO B 159 ASP B 171 1 13 HELIX 23 GLU B 181 LEU B 189 1 9 HELIX 24 ARG B 190 ASP B 193 1 4 HELIX 25 ASP B 209 ASN B 215 1 7 HELIX 26 SER B 246 LEU B 258 1 13 SHEET 1 A 6 ILE A 72 THR A 74 0 SHEET 2 A 6 MSE A 41 THR A 46 1 SHEET 3 A 6 ALA A 9 ASP A 13 1 SHEET 4 A 6 ALA A 199 GLY A 203 1 SHEET 5 A 6 LEU A 219 VAL A 223 1 SHEET 6 A 6 LEU A 242 CYS A 244 1 SHEET 1 B 4 PRO A 90 LEU A 93 0 SHEET 2 B 4 ALA A 112 ILE A 115 1 SHEET 3 B 4 LEU A 140 ALA A 142 1 SHEET 4 B 4 MSE A 175 VAL A 176 1 SHEET 1 C 2 TYR A 148 ARG A 151 0 SHEET 2 C 2 GLY A 154 LEU A 157 -1 SHEET 1 D 6 ILE B 72 THR B 74 0 SHEET 2 D 6 MSE B 41 THR B 46 1 SHEET 3 D 6 ALA B 9 ASP B 13 1 SHEET 4 D 6 ALA B 199 GLY B 203 1 SHEET 5 D 6 LEU B 219 VAL B 223 1 SHEET 6 D 6 LEU B 242 CYS B 244 1 SHEET 1 E 2 HIS B 19 ILE B 20 0 SHEET 2 E 2 ALA B 23 ALA B 24 -1 SHEET 1 F 4 PRO B 90 LEU B 93 0 SHEET 2 F 4 ALA B 112 ILE B 115 1 SHEET 3 F 4 LEU B 140 ALA B 142 1 SHEET 4 F 4 MSE B 175 VAL B 176 1 SHEET 1 G 2 TYR B 148 ARG B 151 0 SHEET 2 G 2 GLY B 154 LEU B 157 -1 LINK C VAL A 40 N MSE A 41 1555 1555 1.33 LINK C MSE A 41 N VAL A 42 1555 1555 1.33 LINK C PRO A 90 N MSE A 91 1555 1555 1.31 LINK C MSE A 91 N LEU A 92 1555 1555 1.34 LINK C ALA A 174 N MSE A 175 1555 1555 1.32 LINK C MSE A 175 N VAL A 176 1555 1555 1.34 LINK C VAL A 200 N MSE A 201 1555 1555 1.33 LINK C MSE A 201 N ILE A 202 1555 1555 1.32 LINK C GLY A 217 N MSE A 218 1555 1555 1.35 LINK C MSE A 218 N LEU A 219 1555 1555 1.34 LINK MG MG A 260 O HOH A 446 1555 1555 2.21 LINK MG MG A 260 OD2 ASP A 13 1555 1555 2.32 LINK MG MG A 260 O ASN A 15 1555 1555 2.91 LINK MG MG A 260 OD1 ASP A 13 1555 1555 2.95 LINK C VAL B 40 N MSE B 41 1555 1555 1.34 LINK C MSE B 41 N VAL B 42 1555 1555 1.33 LINK C PRO B 90 N MSE B 91 1555 1555 1.33 LINK C MSE B 91 N LEU B 92 1555 1555 1.32 LINK C ALA B 174 N MSE B 175 1555 1555 1.33 LINK C MSE B 175 N VAL B 176 1555 1555 1.34 LINK C VAL B 200 N MSE B 201 1555 1555 1.33 LINK C MSE B 201 N ILE B 202 1555 1555 1.35 LINK C GLY B 217 N MSE B 218 1555 1555 1.34 LINK C MSE B 218 N LEU B 219 1555 1555 1.34 LINK MG MG B 301 O ASN B 15 1555 1555 2.33 LINK MG MG B 301 OD1 ASP B 204 1555 1555 2.20 LINK MG MG B 301 O HOH B 459 1555 1555 2.16 LINK MG MG B 301 O HOH B 461 1555 1555 1.89 LINK MG MG B 301 OD2 ASP B 13 1555 1555 2.10 CISPEP 1 LYS A 179 PRO A 180 0 -2.23 CISPEP 2 ASN A 237 PRO A 238 0 -0.07 CISPEP 3 LYS B 179 PRO B 180 0 5.52 CISPEP 4 ASN B 237 PRO B 238 0 -8.35 SITE 1 AC1 4 ASP A 13 ASN A 15 ASP A 204 HOH A 446 SITE 1 AC2 6 ASP B 13 ASN B 15 ASP B 204 PO4 B 401 SITE 2 AC2 6 HOH B 459 HOH B 461 SITE 1 AC3 6 ASP B 13 ASN B 15 THR B 46 ASN B 47 SITE 2 AC3 6 LYS B 179 MG B 301 SITE 1 AC4 3 ARG A 207 LYS A 235 HOH A 460 SITE 1 AC5 2 ARG B 207 LYS B 235 SITE 1 AC6 5 ASN A 47 THR A 48 THR A 49 LYS A 50 SITE 2 AC6 5 GLU A 51 SITE 1 AC7 2 LYS B 50 ARG B 97 SITE 1 AC8 1 LYS A 182 CRYST1 46.586 68.078 190.982 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021466 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014689 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005236 0.00000