data_2HQJ # _entry.id 2HQJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HQJ pdb_00002hqj 10.2210/pdb2hqj/pdb RCSB RCSB038642 ? ? WWPDB D_1000038642 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-25 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-06-28 5 'Structure model' 1 4 2017-10-18 6 'Structure model' 1 5 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity 2 4 'Structure model' entity_name_com 3 4 'Structure model' entity_src_gen 4 4 'Structure model' struct_ref 5 4 'Structure model' struct_ref_seq 6 4 'Structure model' struct_ref_seq_dif 7 5 'Structure model' software 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' database_2 11 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity.pdbx_description' 2 4 'Structure model' '_entity.pdbx_fragment' 3 4 'Structure model' '_entity_name_com.name' 4 4 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 5 4 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 6 4 'Structure model' '_entity_src_gen.pdbx_gene_src_gene' 7 4 'Structure model' '_entity_src_gen.pdbx_seq_type' 8 5 'Structure model' '_software.classification' 9 5 'Structure model' '_software.contact_author' 10 5 'Structure model' '_software.contact_author_email' 11 5 'Structure model' '_software.date' 12 5 'Structure model' '_software.language' 13 5 'Structure model' '_software.location' 14 5 'Structure model' '_software.name' 15 5 'Structure model' '_software.type' 16 5 'Structure model' '_software.version' 17 6 'Structure model' '_database_2.pdbx_DOI' 18 6 'Structure model' '_database_2.pdbx_database_accession' 19 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2HQJ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-07-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id Lmaj007771BAB _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arakaki, T.L.' 1 'Merritt, E.A.' 2 'Structural Genomics of Pathogenic Protozoa Consortium (SGPP)' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Cyclophilin from Leishmania major' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 ;Optimal description of a protein structure in terms of multiple groups undergoing TLS motion ; 'Acta Crystallogr.,Sect.D' 62 439 450 2006 ABCRE6 DK 0907-4449 0766 ? 16552146 10.1107/S0907444906005270 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arakaki, T.L.' 1 ? primary 'Merritt, E.A.' 2 ? 1 'Painter, J.' 3 ? 1 'Merritt, E.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase' 19470.035 1 5.2.1.8 ? 'UNP residues 22-198' ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 water nat water 18.015 122 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PPIase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGSMTNPKVFFDISIDNKAAGRIVMELYADTVPKTAENFRALCTGEKGKGRSGKPLHYKSSVFHRVIPNFMIQGGDFTR GNGTGGESIYGTTFRDESFSGKAGRHTGLGCLSMANAGPNTNGSQFFICTAATPWLDGKHVVFGRVIDGLDVVKKVERLG SSSGKTRSRIVVSDCGEVAADKS ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGSMTNPKVFFDISIDNKAAGRIVMELYADTVPKTAENFRALCTGEKGKGRSGKPLHYKSSVFHRVIPNFMIQGGDFTR GNGTGGESIYGTTFRDESFSGKAGRHTGLGCLSMANAGPNTNGSQFFICTAATPWLDGKHVVFGRVIDGLDVVKKVERLG SSSGKTRSRIVVSDCGEVAADKS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier Lmaj007771BAB # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 THR n 1 7 ASN n 1 8 PRO n 1 9 LYS n 1 10 VAL n 1 11 PHE n 1 12 PHE n 1 13 ASP n 1 14 ILE n 1 15 SER n 1 16 ILE n 1 17 ASP n 1 18 ASN n 1 19 LYS n 1 20 ALA n 1 21 ALA n 1 22 GLY n 1 23 ARG n 1 24 ILE n 1 25 VAL n 1 26 MET n 1 27 GLU n 1 28 LEU n 1 29 TYR n 1 30 ALA n 1 31 ASP n 1 32 THR n 1 33 VAL n 1 34 PRO n 1 35 LYS n 1 36 THR n 1 37 ALA n 1 38 GLU n 1 39 ASN n 1 40 PHE n 1 41 ARG n 1 42 ALA n 1 43 LEU n 1 44 CYS n 1 45 THR n 1 46 GLY n 1 47 GLU n 1 48 LYS n 1 49 GLY n 1 50 LYS n 1 51 GLY n 1 52 ARG n 1 53 SER n 1 54 GLY n 1 55 LYS n 1 56 PRO n 1 57 LEU n 1 58 HIS n 1 59 TYR n 1 60 LYS n 1 61 SER n 1 62 SER n 1 63 VAL n 1 64 PHE n 1 65 HIS n 1 66 ARG n 1 67 VAL n 1 68 ILE n 1 69 PRO n 1 70 ASN n 1 71 PHE n 1 72 MET n 1 73 ILE n 1 74 GLN n 1 75 GLY n 1 76 GLY n 1 77 ASP n 1 78 PHE n 1 79 THR n 1 80 ARG n 1 81 GLY n 1 82 ASN n 1 83 GLY n 1 84 THR n 1 85 GLY n 1 86 GLY n 1 87 GLU n 1 88 SER n 1 89 ILE n 1 90 TYR n 1 91 GLY n 1 92 THR n 1 93 THR n 1 94 PHE n 1 95 ARG n 1 96 ASP n 1 97 GLU n 1 98 SER n 1 99 PHE n 1 100 SER n 1 101 GLY n 1 102 LYS n 1 103 ALA n 1 104 GLY n 1 105 ARG n 1 106 HIS n 1 107 THR n 1 108 GLY n 1 109 LEU n 1 110 GLY n 1 111 CYS n 1 112 LEU n 1 113 SER n 1 114 MET n 1 115 ALA n 1 116 ASN n 1 117 ALA n 1 118 GLY n 1 119 PRO n 1 120 ASN n 1 121 THR n 1 122 ASN n 1 123 GLY n 1 124 SER n 1 125 GLN n 1 126 PHE n 1 127 PHE n 1 128 ILE n 1 129 CYS n 1 130 THR n 1 131 ALA n 1 132 ALA n 1 133 THR n 1 134 PRO n 1 135 TRP n 1 136 LEU n 1 137 ASP n 1 138 GLY n 1 139 LYS n 1 140 HIS n 1 141 VAL n 1 142 VAL n 1 143 PHE n 1 144 GLY n 1 145 ARG n 1 146 VAL n 1 147 ILE n 1 148 ASP n 1 149 GLY n 1 150 LEU n 1 151 ASP n 1 152 VAL n 1 153 VAL n 1 154 LYS n 1 155 LYS n 1 156 VAL n 1 157 GLU n 1 158 ARG n 1 159 LEU n 1 160 GLY n 1 161 SER n 1 162 SER n 1 163 SER n 1 164 GLY n 1 165 LYS n 1 166 THR n 1 167 ARG n 1 168 SER n 1 169 ARG n 1 170 ILE n 1 171 VAL n 1 172 VAL n 1 173 SER n 1 174 ASP n 1 175 CYS n 1 176 GLY n 1 177 GLU n 1 178 VAL n 1 179 ALA n 1 180 ALA n 1 181 ASP n 1 182 LYS n 1 183 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 183 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Leishmania _entity_src_gen.pdbx_gene_src_gene 'CYP11, LMJF_23_0050' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Leishmania major' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5664 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain EQ7351B _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET14b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 ? ? ? A . n A 1 4 SER 4 0 ? ? ? A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 THR 6 2 2 THR THR A . n A 1 7 ASN 7 3 3 ASN ASN A . n A 1 8 PRO 8 4 4 PRO PRO A . n A 1 9 LYS 9 5 5 LYS LYS A . n A 1 10 VAL 10 6 6 VAL VAL A . n A 1 11 PHE 11 7 7 PHE PHE A . n A 1 12 PHE 12 8 8 PHE PHE A . n A 1 13 ASP 13 9 9 ASP ASP A . n A 1 14 ILE 14 10 10 ILE ILE A . n A 1 15 SER 15 11 11 SER SER A . n A 1 16 ILE 16 12 12 ILE ILE A . n A 1 17 ASP 17 13 13 ASP ASP A . n A 1 18 ASN 18 14 14 ASN ASN A . n A 1 19 LYS 19 15 15 LYS LYS A . n A 1 20 ALA 20 16 16 ALA ALA A . n A 1 21 ALA 21 17 17 ALA ALA A . n A 1 22 GLY 22 18 18 GLY GLY A . n A 1 23 ARG 23 19 19 ARG ARG A . n A 1 24 ILE 24 20 20 ILE ILE A . n A 1 25 VAL 25 21 21 VAL VAL A . n A 1 26 MET 26 22 22 MET MET A . n A 1 27 GLU 27 23 23 GLU GLU A . n A 1 28 LEU 28 24 24 LEU LEU A . n A 1 29 TYR 29 25 25 TYR TYR A . n A 1 30 ALA 30 26 26 ALA ALA A . n A 1 31 ASP 31 27 27 ASP ASP A . n A 1 32 THR 32 28 28 THR THR A . n A 1 33 VAL 33 29 29 VAL VAL A . n A 1 34 PRO 34 30 30 PRO PRO A . n A 1 35 LYS 35 31 31 LYS LYS A . n A 1 36 THR 36 32 32 THR THR A . n A 1 37 ALA 37 33 33 ALA ALA A . n A 1 38 GLU 38 34 34 GLU GLU A . n A 1 39 ASN 39 35 35 ASN ASN A . n A 1 40 PHE 40 36 36 PHE PHE A . n A 1 41 ARG 41 37 37 ARG ARG A . n A 1 42 ALA 42 38 38 ALA ALA A . n A 1 43 LEU 43 39 39 LEU LEU A . n A 1 44 CYS 44 40 40 CYS CYS A . n A 1 45 THR 45 41 41 THR THR A . n A 1 46 GLY 46 42 42 GLY GLY A . n A 1 47 GLU 47 43 43 GLU GLU A . n A 1 48 LYS 48 44 44 LYS LYS A . n A 1 49 GLY 49 45 45 GLY GLY A . n A 1 50 LYS 50 46 46 LYS LYS A . n A 1 51 GLY 51 47 47 GLY GLY A . n A 1 52 ARG 52 48 48 ARG ARG A . n A 1 53 SER 53 49 49 SER SER A . n A 1 54 GLY 54 50 50 GLY GLY A . n A 1 55 LYS 55 51 51 LYS LYS A . n A 1 56 PRO 56 52 52 PRO PRO A . n A 1 57 LEU 57 53 53 LEU LEU A . n A 1 58 HIS 58 54 54 HIS HIS A . n A 1 59 TYR 59 55 55 TYR TYR A . n A 1 60 LYS 60 56 56 LYS LYS A . n A 1 61 SER 61 57 57 SER SER A . n A 1 62 SER 62 58 58 SER SER A . n A 1 63 VAL 63 59 59 VAL VAL A . n A 1 64 PHE 64 60 60 PHE PHE A . n A 1 65 HIS 65 61 61 HIS HIS A . n A 1 66 ARG 66 62 62 ARG ARG A . n A 1 67 VAL 67 63 63 VAL VAL A . n A 1 68 ILE 68 64 64 ILE ILE A . n A 1 69 PRO 69 65 65 PRO PRO A . n A 1 70 ASN 70 66 66 ASN ASN A . n A 1 71 PHE 71 67 67 PHE PHE A . n A 1 72 MET 72 68 68 MET MET A . n A 1 73 ILE 73 69 69 ILE ILE A . n A 1 74 GLN 74 70 70 GLN GLN A . n A 1 75 GLY 75 71 71 GLY GLY A . n A 1 76 GLY 76 72 72 GLY GLY A . n A 1 77 ASP 77 73 73 ASP ASP A . n A 1 78 PHE 78 74 74 PHE PHE A . n A 1 79 THR 79 75 75 THR THR A . n A 1 80 ARG 80 76 76 ARG ARG A . n A 1 81 GLY 81 77 77 GLY GLY A . n A 1 82 ASN 82 78 78 ASN ASN A . n A 1 83 GLY 83 79 79 GLY GLY A . n A 1 84 THR 84 80 80 THR THR A . n A 1 85 GLY 85 81 81 GLY GLY A . n A 1 86 GLY 86 82 82 GLY GLY A . n A 1 87 GLU 87 83 83 GLU GLU A . n A 1 88 SER 88 84 84 SER SER A . n A 1 89 ILE 89 85 85 ILE ILE A . n A 1 90 TYR 90 86 86 TYR TYR A . n A 1 91 GLY 91 87 87 GLY GLY A . n A 1 92 THR 92 88 88 THR THR A . n A 1 93 THR 93 89 89 THR THR A . n A 1 94 PHE 94 90 90 PHE PHE A . n A 1 95 ARG 95 91 91 ARG ARG A . n A 1 96 ASP 96 92 92 ASP ASP A . n A 1 97 GLU 97 93 93 GLU GLU A . n A 1 98 SER 98 94 94 SER SER A . n A 1 99 PHE 99 95 95 PHE PHE A . n A 1 100 SER 100 96 96 SER SER A . n A 1 101 GLY 101 97 97 GLY GLY A . n A 1 102 LYS 102 98 98 LYS LYS A . n A 1 103 ALA 103 99 99 ALA ALA A . n A 1 104 GLY 104 100 100 GLY GLY A . n A 1 105 ARG 105 101 101 ARG ARG A . n A 1 106 HIS 106 102 102 HIS HIS A . n A 1 107 THR 107 103 103 THR THR A . n A 1 108 GLY 108 104 104 GLY GLY A . n A 1 109 LEU 109 105 105 LEU LEU A . n A 1 110 GLY 110 106 106 GLY GLY A . n A 1 111 CYS 111 107 107 CYS CYS A . n A 1 112 LEU 112 108 108 LEU LEU A . n A 1 113 SER 113 109 109 SER SER A . n A 1 114 MET 114 110 110 MET MET A . n A 1 115 ALA 115 111 111 ALA ALA A . n A 1 116 ASN 116 112 112 ASN ASN A . n A 1 117 ALA 117 113 113 ALA ALA A . n A 1 118 GLY 118 114 114 GLY GLY A . n A 1 119 PRO 119 115 115 PRO PRO A . n A 1 120 ASN 120 116 116 ASN ASN A . n A 1 121 THR 121 117 117 THR THR A . n A 1 122 ASN 122 118 118 ASN ASN A . n A 1 123 GLY 123 119 119 GLY GLY A . n A 1 124 SER 124 120 120 SER SER A . n A 1 125 GLN 125 121 121 GLN GLN A . n A 1 126 PHE 126 122 122 PHE PHE A . n A 1 127 PHE 127 123 123 PHE PHE A . n A 1 128 ILE 128 124 124 ILE ILE A . n A 1 129 CYS 129 125 125 CYS CYS A . n A 1 130 THR 130 126 126 THR THR A . n A 1 131 ALA 131 127 127 ALA ALA A . n A 1 132 ALA 132 128 128 ALA ALA A . n A 1 133 THR 133 129 129 THR THR A . n A 1 134 PRO 134 130 130 PRO PRO A . n A 1 135 TRP 135 131 131 TRP TRP A . n A 1 136 LEU 136 132 132 LEU LEU A . n A 1 137 ASP 137 133 133 ASP ASP A . n A 1 138 GLY 138 134 134 GLY GLY A . n A 1 139 LYS 139 135 135 LYS LYS A . n A 1 140 HIS 140 136 136 HIS HIS A . n A 1 141 VAL 141 137 137 VAL VAL A . n A 1 142 VAL 142 138 138 VAL VAL A . n A 1 143 PHE 143 139 139 PHE PHE A . n A 1 144 GLY 144 140 140 GLY GLY A . n A 1 145 ARG 145 141 141 ARG ARG A . n A 1 146 VAL 146 142 142 VAL VAL A . n A 1 147 ILE 147 143 143 ILE ILE A . n A 1 148 ASP 148 144 144 ASP ASP A . n A 1 149 GLY 149 145 145 GLY GLY A . n A 1 150 LEU 150 146 146 LEU LEU A . n A 1 151 ASP 151 147 147 ASP ASP A . n A 1 152 VAL 152 148 148 VAL VAL A . n A 1 153 VAL 153 149 149 VAL VAL A . n A 1 154 LYS 154 150 150 LYS LYS A . n A 1 155 LYS 155 151 151 LYS LYS A . n A 1 156 VAL 156 152 152 VAL VAL A . n A 1 157 GLU 157 153 153 GLU GLU A . n A 1 158 ARG 158 154 154 ARG ARG A . n A 1 159 LEU 159 155 155 LEU LEU A . n A 1 160 GLY 160 156 156 GLY GLY A . n A 1 161 SER 161 157 157 SER SER A . n A 1 162 SER 162 158 158 SER SER A . n A 1 163 SER 163 159 159 SER SER A . n A 1 164 GLY 164 160 160 GLY GLY A . n A 1 165 LYS 165 161 161 LYS LYS A . n A 1 166 THR 166 162 162 THR THR A . n A 1 167 ARG 167 163 163 ARG ARG A . n A 1 168 SER 168 164 164 SER SER A . n A 1 169 ARG 169 165 165 ARG ARG A . n A 1 170 ILE 170 166 166 ILE ILE A . n A 1 171 VAL 171 167 167 VAL VAL A . n A 1 172 VAL 172 168 168 VAL VAL A . n A 1 173 SER 173 169 169 SER SER A . n A 1 174 ASP 174 170 170 ASP ASP A . n A 1 175 CYS 175 171 171 CYS CYS A . n A 1 176 GLY 176 172 172 GLY GLY A . n A 1 177 GLU 177 173 173 GLU GLU A . n A 1 178 VAL 178 174 174 VAL VAL A . n A 1 179 ALA 179 175 175 ALA ALA A . n A 1 180 ALA 180 176 176 ALA ALA A . n A 1 181 ASP 181 177 177 ASP ASP A . n A 1 182 LYS 182 178 178 LYS LYS A . n A 1 183 SER 183 179 179 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 180 150 PO4 PO4 A . C 3 HOH 1 181 1 HOH HOH A . C 3 HOH 2 182 2 HOH HOH A . C 3 HOH 3 183 3 HOH HOH A . C 3 HOH 4 184 4 HOH HOH A . C 3 HOH 5 185 5 HOH HOH A . C 3 HOH 6 186 6 HOH HOH A . C 3 HOH 7 187 7 HOH HOH A . C 3 HOH 8 188 8 HOH HOH A . C 3 HOH 9 189 9 HOH HOH A . C 3 HOH 10 190 10 HOH HOH A . C 3 HOH 11 191 11 HOH HOH A . C 3 HOH 12 192 13 HOH HOH A . C 3 HOH 13 193 14 HOH HOH A . C 3 HOH 14 194 15 HOH HOH A . C 3 HOH 15 195 16 HOH HOH A . C 3 HOH 16 196 17 HOH HOH A . C 3 HOH 17 197 18 HOH HOH A . C 3 HOH 18 198 19 HOH HOH A . C 3 HOH 19 199 20 HOH HOH A . C 3 HOH 20 200 21 HOH HOH A . C 3 HOH 21 201 22 HOH HOH A . C 3 HOH 22 202 23 HOH HOH A . C 3 HOH 23 203 24 HOH HOH A . C 3 HOH 24 204 25 HOH HOH A . C 3 HOH 25 205 26 HOH HOH A . C 3 HOH 26 206 27 HOH HOH A . C 3 HOH 27 207 28 HOH HOH A . C 3 HOH 28 208 29 HOH HOH A . C 3 HOH 29 209 30 HOH HOH A . C 3 HOH 30 210 31 HOH HOH A . C 3 HOH 31 211 32 HOH HOH A . C 3 HOH 32 212 33 HOH HOH A . C 3 HOH 33 213 34 HOH HOH A . C 3 HOH 34 214 35 HOH HOH A . C 3 HOH 35 215 36 HOH HOH A . C 3 HOH 36 216 37 HOH HOH A . C 3 HOH 37 217 38 HOH HOH A . C 3 HOH 38 218 39 HOH HOH A . C 3 HOH 39 219 40 HOH HOH A . C 3 HOH 40 220 41 HOH HOH A . C 3 HOH 41 221 42 HOH HOH A . C 3 HOH 42 222 43 HOH HOH A . C 3 HOH 43 223 44 HOH HOH A . C 3 HOH 44 224 45 HOH HOH A . C 3 HOH 45 225 46 HOH HOH A . C 3 HOH 46 226 47 HOH HOH A . C 3 HOH 47 227 48 HOH HOH A . C 3 HOH 48 228 49 HOH HOH A . C 3 HOH 49 229 50 HOH HOH A . C 3 HOH 50 230 51 HOH HOH A . C 3 HOH 51 231 52 HOH HOH A . C 3 HOH 52 232 53 HOH HOH A . C 3 HOH 53 233 54 HOH HOH A . C 3 HOH 54 234 55 HOH HOH A . C 3 HOH 55 235 56 HOH HOH A . C 3 HOH 56 236 57 HOH HOH A . C 3 HOH 57 237 58 HOH HOH A . C 3 HOH 58 238 59 HOH HOH A . C 3 HOH 59 239 60 HOH HOH A . C 3 HOH 60 240 61 HOH HOH A . C 3 HOH 61 241 64 HOH HOH A . C 3 HOH 62 242 65 HOH HOH A . C 3 HOH 63 243 66 HOH HOH A . C 3 HOH 64 244 67 HOH HOH A . C 3 HOH 65 245 68 HOH HOH A . C 3 HOH 66 246 69 HOH HOH A . C 3 HOH 67 247 71 HOH HOH A . C 3 HOH 68 248 73 HOH HOH A . C 3 HOH 69 249 74 HOH HOH A . C 3 HOH 70 250 75 HOH HOH A . C 3 HOH 71 251 76 HOH HOH A . C 3 HOH 72 252 77 HOH HOH A . C 3 HOH 73 253 78 HOH HOH A . C 3 HOH 74 254 79 HOH HOH A . C 3 HOH 75 255 80 HOH HOH A . C 3 HOH 76 256 82 HOH HOH A . C 3 HOH 77 257 86 HOH HOH A . C 3 HOH 78 258 87 HOH HOH A . C 3 HOH 79 259 88 HOH HOH A . C 3 HOH 80 260 89 HOH HOH A . C 3 HOH 81 261 91 HOH HOH A . C 3 HOH 82 262 93 HOH HOH A . C 3 HOH 83 263 94 HOH HOH A . C 3 HOH 84 264 96 HOH HOH A . C 3 HOH 85 265 97 HOH HOH A . C 3 HOH 86 266 99 HOH HOH A . C 3 HOH 87 267 100 HOH HOH A . C 3 HOH 88 268 101 HOH HOH A . C 3 HOH 89 269 103 HOH HOH A . C 3 HOH 90 270 104 HOH HOH A . C 3 HOH 91 271 105 HOH HOH A . C 3 HOH 92 272 106 HOH HOH A . C 3 HOH 93 273 107 HOH HOH A . C 3 HOH 94 274 108 HOH HOH A . C 3 HOH 95 275 109 HOH HOH A . C 3 HOH 96 276 113 HOH HOH A . C 3 HOH 97 277 114 HOH HOH A . C 3 HOH 98 278 115 HOH HOH A . C 3 HOH 99 279 116 HOH HOH A . C 3 HOH 100 280 118 HOH HOH A . C 3 HOH 101 281 119 HOH HOH A . C 3 HOH 102 282 121 HOH HOH A . C 3 HOH 103 283 122 HOH HOH A . C 3 HOH 104 284 123 HOH HOH A . C 3 HOH 105 285 124 HOH HOH A . C 3 HOH 106 286 125 HOH HOH A . C 3 HOH 107 287 127 HOH HOH A . C 3 HOH 108 288 128 HOH HOH A . C 3 HOH 109 289 129 HOH HOH A . C 3 HOH 110 290 131 HOH HOH A . C 3 HOH 111 291 132 HOH HOH A . C 3 HOH 112 292 133 HOH HOH A . C 3 HOH 113 293 134 HOH HOH A . C 3 HOH 114 294 135 HOH HOH A . C 3 HOH 115 295 136 HOH HOH A . C 3 HOH 116 296 137 HOH HOH A . C 3 HOH 117 297 138 HOH HOH A . C 3 HOH 118 298 140 HOH HOH A . C 3 HOH 119 299 141 HOH HOH A . C 3 HOH 120 300 142 HOH HOH A . C 3 HOH 121 301 143 HOH HOH A . C 3 HOH 122 302 144 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MOLREP . ? other 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # _cell.length_a 45.865 _cell.length_b 63.511 _cell.length_c 66.295 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2HQJ _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2HQJ _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2HQJ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 10.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '40% PEG 8000, 0.2M Potassium phosphate monobasic, 0.1M CAPS, 5mM DTT, pH 10.0, vapor diffusion, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2006-06-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9076 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.9076 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 # _reflns.entry_id 2HQJ _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 40 _reflns.number_obs 13170 _reflns.pdbx_Rmerge_I_obs 0.125 _reflns.pdbx_netI_over_sigmaI 5.800 _reflns.pdbx_chi_squared 1.031 _reflns.pdbx_redundancy 3.500 _reflns.percent_possible_obs 96.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.00 2.07 ? ? ? 0.481 ? ? 1.086 2.80 ? 1214 90.90 1 1 2.07 2.15 ? ? ? 0.434 ? ? 1.004 3.10 ? 1257 94.70 2 1 2.15 2.25 ? ? ? 0.352 ? ? 1.110 3.30 ? 1311 97.50 3 1 2.25 2.37 ? ? ? 0.306 ? ? 1.066 3.50 ? 1332 98.00 4 1 2.37 2.52 ? ? ? 0.24 ? ? 0.953 3.60 ? 1321 98.40 5 1 2.52 2.71 ? ? ? 0.21 ? ? 1.019 3.70 ? 1328 97.40 6 1 2.71 2.99 ? ? ? 0.14 ? ? 0.929 3.70 ? 1334 98.50 7 1 2.99 3.42 ? ? ? 0.09 ? ? 1.026 3.70 ? 1355 97.50 8 1 3.42 4.31 ? ? ? 0.059 ? ? 1.140 3.70 ? 1338 96.30 9 1 4.31 40.00 ? ? ? 0.044 ? ? 1.007 3.60 ? 1380 92.40 10 1 # _refine.entry_id 2HQJ _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 32.43 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 95.890 _refine.ls_number_reflns_obs 13167 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.193 _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.239 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 659 _refine.B_iso_mean 8.460 _refine.aniso_B[1][1] 0.050 _refine.aniso_B[2][2] -0.270 _refine.aniso_B[3][3] 0.220 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.pdbx_overall_ESU_R 0.185 _refine.pdbx_overall_ESU_R_Free 0.169 _refine.overall_SU_ML 0.125 _refine.overall_SU_B 8.615 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1344 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 1471 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 32.43 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1378 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 961 0.010 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1855 1.521 1.950 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2328 1.035 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 180 7.198 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 57 37.352 22.807 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 233 15.438 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 19.603 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 201 0.093 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1561 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 297 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 252 0.185 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1002 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 672 0.170 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 734 0.088 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 99 0.160 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 14 0.168 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 43 0.329 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 11 0.148 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1129 0.809 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 376 0.171 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1408 1.025 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 575 1.914 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 446 2.533 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.0 _refine_ls_shell.d_res_low 2.048 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 86.950 _refine_ls_shell.number_reflns_R_work 803 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.248 _refine_ls_shell.R_factor_R_free 0.276 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 853 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HQJ _struct.title 'Cyclophilin from Leishmania major' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HQJ _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'Structural Genomics, PSI, Protein Structure Initiative, Structural Genomics of Pathogenic Protozoa Consortium, SGPP, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q4QBH1_LEIMA _struct_ref.pdbx_db_accession Q4QBH1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TNPKVFFDISIDNKAAGRIVMELYADTVPKTAENFRALCTGEKGKGRSGKPLHYKSSVFHRVIPNFMIQGGDFTRGNGTG GESIYGTTFRDESFSGKAGRHTGLGCLSMANAGPNTNGSQFFICTAATPWLDGKHVVFGRVIDGLDVVKKVERLGSSSGK TRSRIVVSDCGEVAADKS ; _struct_ref.pdbx_align_begin 22 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HQJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 183 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4QBH1 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 199 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 179 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HQJ GLY A 1 ? UNP Q4QBH1 ? ? 'expression tag' -3 1 1 2HQJ PRO A 2 ? UNP Q4QBH1 ? ? 'expression tag' -2 2 1 2HQJ GLY A 3 ? UNP Q4QBH1 ? ? 'expression tag' -1 3 1 2HQJ SER A 4 ? UNP Q4QBH1 ? ? 'expression tag' 0 4 1 2HQJ MET A 5 ? UNP Q4QBH1 ? ? 'expression tag' 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 33 ? GLY A 46 ? VAL A 29 GLY A 42 1 ? 14 HELX_P HELX_P2 2 SER A 100 ? ARG A 105 ? SER A 96 ARG A 101 5 ? 6 HELX_P HELX_P3 3 THR A 133 ? ASP A 137 ? THR A 129 ASP A 133 5 ? 5 HELX_P HELX_P4 4 GLY A 149 ? ARG A 158 ? GLY A 145 ARG A 154 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 66 ? ILE A 68 ? ARG A 62 ILE A 64 A 2 MET A 72 ? GLY A 75 ? MET A 68 GLY A 71 A 3 ASN A 122 ? CYS A 129 ? ASN A 118 CYS A 125 A 4 CYS A 111 ? ASN A 116 ? CYS A 107 ASN A 112 A 5 VAL A 142 ? ASP A 148 ? VAL A 138 ASP A 144 A 6 LYS A 19 ? LEU A 28 ? LYS A 15 LEU A 24 A 7 LYS A 9 ? ILE A 16 ? LYS A 5 ILE A 12 A 8 ILE A 170 ? VAL A 178 ? ILE A 166 VAL A 174 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 66 ? N ARG A 62 O GLN A 74 ? O GLN A 70 A 2 3 N ILE A 73 ? N ILE A 69 O ILE A 128 ? O ILE A 124 A 3 4 O CYS A 129 ? O CYS A 125 N CYS A 111 ? N CYS A 107 A 4 5 N LEU A 112 ? N LEU A 108 O GLY A 144 ? O GLY A 140 A 5 6 O ILE A 147 ? O ILE A 143 N VAL A 25 ? N VAL A 21 A 6 7 O ALA A 21 ? O ALA A 17 N ILE A 14 ? N ILE A 10 A 7 8 N ASP A 13 ? N ASP A 9 O ASP A 174 ? O ASP A 170 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PO4 _struct_site.pdbx_auth_seq_id 180 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 A 180' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PRO A 56 ? PRO A 52 . ? 1_555 ? 2 AC1 4 HIS A 58 ? HIS A 54 . ? 1_555 ? 3 AC1 4 HOH C . ? HOH A 213 . ? 4_545 ? 4 AC1 4 HOH C . ? HOH A 214 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 13 ? ? 29.87 59.87 2 1 PHE A 67 ? ? -137.96 -75.06 3 1 SER A 94 ? ? 180.00 151.09 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Structural Genomics of Pathogenic Protozoa Consortium' _pdbx_SG_project.initial_of_center SGPP # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -1.1660 -28.4710 -11.3280 0.0054 -0.0326 0.0506 -0.0217 0.0212 -0.0343 5.0436 4.3589 11.7115 -1.4210 3.0645 -2.3864 0.0105 -0.0646 0.0541 -0.0230 -0.1747 0.0445 -0.0654 0.0642 -0.2103 'X-RAY DIFFRACTION' 2 ? refined 3.0000 -17.7950 -16.9960 0.0401 0.0057 0.0091 -0.0196 0.0102 0.0118 1.7482 1.1845 1.6850 -0.0790 0.4884 0.3727 -0.0418 0.0355 0.0063 0.1182 0.1034 -0.0567 -0.1311 -0.0442 0.1966 'X-RAY DIFFRACTION' 3 ? refined -11.1990 -17.1460 -2.1170 0.0199 -0.0259 0.0299 0.0262 0.0156 0.0246 25.3512 0.1388 5.0733 -0.2395 2.1435 0.7969 -0.0552 -0.0758 0.1311 -0.1867 0.6490 0.2625 -0.0645 -0.1704 -0.1085 'X-RAY DIFFRACTION' 4 ? refined 1.2540 -9.7100 -14.0730 0.0285 -0.0253 0.0041 -0.0325 0.0051 0.0182 1.1544 0.6869 5.0633 -0.8756 1.2919 -1.2673 -0.0431 0.0222 0.0209 0.0430 0.0773 -0.0609 -0.0154 -0.3016 0.2811 'X-RAY DIFFRACTION' 5 ? refined -15.8060 -15.1880 -22.4260 -0.0382 0.0342 0.0192 -0.0331 -0.0612 0.0514 7.2926 4.2792 18.0714 -4.1967 0.8698 5.2868 -0.1060 0.3775 -0.2715 0.4026 -0.0348 0.5113 -0.4098 0.6047 -0.7930 'X-RAY DIFFRACTION' 6 ? refined -11.0130 -14.1040 -13.1390 -0.0092 -0.0050 -0.0088 0.0039 0.0099 -0.0006 1.8133 1.2443 1.2688 0.5460 0.1267 -0.6888 -0.0201 0.0503 -0.0302 -0.0172 0.1158 0.1847 0.0704 -0.1090 -0.1718 'X-RAY DIFFRACTION' 7 ? refined -9.3830 -29.6180 -8.6750 -0.0177 -0.0533 0.0633 0.0023 0.0288 -0.0138 3.3244 7.3462 28.3806 2.9303 -1.2059 -3.5465 -0.2110 0.0873 0.1237 0.0156 -0.3845 0.0784 -0.1070 0.8565 -0.5056 'X-RAY DIFFRACTION' 8 ? refined -1.3950 -24.7690 -5.3920 0.0131 -0.0217 0.0355 -0.0029 -0.0033 0.0439 2.8446 3.0938 4.9642 -2.1414 -2.6702 3.5564 -0.1156 0.1259 -0.0103 -0.1886 0.0543 0.0277 0.1015 0.1197 0.1568 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 5 A 27 ALL A 1 A 23 'X-RAY DIFFRACTION' ? 2 2 A 28 A 65 ALL A 24 A 61 'X-RAY DIFFRACTION' ? 3 3 A 66 A 73 ALL A 62 A 69 'X-RAY DIFFRACTION' ? 4 4 A 74 A 97 ALL A 70 A 93 'X-RAY DIFFRACTION' ? 5 5 A 98 A 105 ALL A 94 A 101 'X-RAY DIFFRACTION' ? 6 6 A 106 A 144 ALL A 102 A 140 'X-RAY DIFFRACTION' ? 7 7 A 145 A 155 ALL A 141 A 151 'X-RAY DIFFRACTION' ? 8 8 A 156 A 183 ALL A 152 A 179 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 2HQJ _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.080 _pdbx_phasing_MR.d_res_low_rotation 32.430 _pdbx_phasing_MR.d_res_high_translation 2.080 _pdbx_phasing_MR.d_res_low_translation 32.430 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE RESIDUES NUMBERING 2 TO 20 IN UNIPROT DATABASE SEQUENCE, Q4QBH1, WERE DELETED. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A GLY -1 ? A GLY 3 4 1 Y 1 A SER 0 ? A SER 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PO4 P P N N 273 PO4 O1 O N N 274 PO4 O2 O N N 275 PO4 O3 O N N 276 PO4 O4 O N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PO4 P O1 doub N N 260 PO4 P O2 sing N N 261 PO4 P O3 sing N N 262 PO4 P O4 sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # _atom_sites.entry_id 2HQJ _atom_sites.fract_transf_matrix[1][1] 0.021803 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015745 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015084 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_