data_2HQV # _entry.id 2HQV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2HQV RCSB RCSB038654 WWPDB D_1000038654 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id AtR92 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HQV _pdbx_database_status.recvd_initial_deposition_date 2006-07-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vorobiev, S.M.' 1 'Neely, H.' 2 'Seetharaman, J.' 3 'Zhao, L.' 4 'Cunningham, K.' 5 'Ma, L.C.' 6 'Fang, Y.' 7 'Xiao, R.' 8 'Acton, T.' 9 'Montelione, T.G.' 10 'Hunt, J.F.' 11 'Tong, L.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title 'Crystal structure of AGR_C_4470p from Agrobacterium tumefaciens.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 16 _citation.page_first 535 _citation.page_last 538 _citation.year 2007 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17322535 _citation.pdbx_database_id_DOI 10.1110/ps.062663307 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vorobiev, S.M.' 1 primary 'Neely, H.' 2 primary 'Seetharaman, J.' 3 primary 'Ma, L.C.' 4 primary 'Xiao, R.' 5 primary 'Acton, T.B.' 6 primary 'Montelione, G.T.' 7 primary 'Tong, L.' 8 # _cell.entry_id 2HQV _cell.length_a 66.239 _cell.length_b 72.322 _cell.length_c 104.726 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HQV _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man AGR_C_4470p 21620.748 1 ? 'C-tag: LEHHHHHH' ? ? 2 water nat water 18.015 67 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MANAIRLPPEAYP(MSE)SIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIW NE(MSE)RGWGEIL(MSE)IVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVW F(MSE)NAAGGA(MSE)FKIFVRRDENKELLAGQLAKFEELRDGFRGLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MANAIRLPPEAYPMSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMR GWGEILMIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKI FVRRDENKELLAGQLAKFEELRDGFRGLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier AtR92 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASN n 1 4 ALA n 1 5 ILE n 1 6 ARG n 1 7 LEU n 1 8 PRO n 1 9 PRO n 1 10 GLU n 1 11 ALA n 1 12 TYR n 1 13 PRO n 1 14 MSE n 1 15 SER n 1 16 ILE n 1 17 ALA n 1 18 ALA n 1 19 GLN n 1 20 LYS n 1 21 ASN n 1 22 ASP n 1 23 ASP n 1 24 ASP n 1 25 ARG n 1 26 GLN n 1 27 ALA n 1 28 ARG n 1 29 ALA n 1 30 LEU n 1 31 ALA n 1 32 ALA n 1 33 LEU n 1 34 ALA n 1 35 GLU n 1 36 LYS n 1 37 PRO n 1 38 ASP n 1 39 GLY n 1 40 ILE n 1 41 VAL n 1 42 GLU n 1 43 ALA n 1 44 ILE n 1 45 ALA n 1 46 ALA n 1 47 LYS n 1 48 ALA n 1 49 GLU n 1 50 VAL n 1 51 ALA n 1 52 PRO n 1 53 ALA n 1 54 GLU n 1 55 ILE n 1 56 LEU n 1 57 ALA n 1 58 ILE n 1 59 LEU n 1 60 PRO n 1 61 GLN n 1 62 GLY n 1 63 ALA n 1 64 ALA n 1 65 VAL n 1 66 SER n 1 67 ALA n 1 68 PRO n 1 69 ALA n 1 70 ASP n 1 71 ARG n 1 72 PHE n 1 73 ASP n 1 74 ALA n 1 75 ILE n 1 76 TRP n 1 77 ASN n 1 78 GLU n 1 79 MSE n 1 80 ARG n 1 81 GLY n 1 82 TRP n 1 83 GLY n 1 84 GLU n 1 85 ILE n 1 86 LEU n 1 87 MSE n 1 88 ILE n 1 89 VAL n 1 90 GLN n 1 91 THR n 1 92 GLY n 1 93 ASP n 1 94 ILE n 1 95 VAL n 1 96 LEU n 1 97 GLU n 1 98 VAL n 1 99 PRO n 1 100 GLY n 1 101 HIS n 1 102 LEU n 1 103 PRO n 1 104 GLU n 1 105 GLY n 1 106 THR n 1 107 GLU n 1 108 SER n 1 109 HIS n 1 110 GLY n 1 111 TRP n 1 112 PHE n 1 113 ASN n 1 114 ILE n 1 115 HIS n 1 116 GLY n 1 117 ASP n 1 118 SER n 1 119 PRO n 1 120 ILE n 1 121 GLY n 1 122 GLY n 1 123 HIS n 1 124 ILE n 1 125 LYS n 1 126 LYS n 1 127 ASP n 1 128 ASN n 1 129 CYS n 1 130 ALA n 1 131 ALA n 1 132 ILE n 1 133 THR n 1 134 PHE n 1 135 VAL n 1 136 ASP n 1 137 ARG n 1 138 GLY n 1 139 PHE n 1 140 HIS n 1 141 GLY n 1 142 ARG n 1 143 ARG n 1 144 SER n 1 145 CYS n 1 146 SER n 1 147 VAL n 1 148 TRP n 1 149 PHE n 1 150 MSE n 1 151 ASN n 1 152 ALA n 1 153 ALA n 1 154 GLY n 1 155 GLY n 1 156 ALA n 1 157 MSE n 1 158 PHE n 1 159 LYS n 1 160 ILE n 1 161 PHE n 1 162 VAL n 1 163 ARG n 1 164 ARG n 1 165 ASP n 1 166 GLU n 1 167 ASN n 1 168 LYS n 1 169 GLU n 1 170 LEU n 1 171 LEU n 1 172 ALA n 1 173 GLY n 1 174 GLN n 1 175 LEU n 1 176 ALA n 1 177 LYS n 1 178 PHE n 1 179 GLU n 1 180 GLU n 1 181 LEU n 1 182 ARG n 1 183 ASP n 1 184 GLY n 1 185 PHE n 1 186 ARG n 1 187 GLY n 1 188 LEU n 1 189 GLU n 1 190 HIS n 1 191 HIS n 1 192 HIS n 1 193 HIS n 1 194 HIS n 1 195 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Agrobacterium _entity_src_gen.pdbx_gene_src_gene AGR_C_4470 _entity_src_gen.gene_src_species 'Agrobacterium tumefaciens' _entity_src_gen.gene_src_strain 'C58-ATCC 33970' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Agrobacterium tumefaciens str. C58' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 176299 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) + Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7CX01_AGRT5 _struct_ref.pdbx_db_accession Q7CX01 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANAIRLPPEAYPMSIAAQKNDDDRQARALAALAEKPDGIVEAIAAKAEVAPAEILAILPQGAAVSAPADRFDAIWNEMR GWGEILMIVQTGDIVLEVPGHLPEGTESHGWFNIHGDSPIGGHIKKDNCAAITFVDRGFHGRRSCSVWFMNAAGGAMFKI FVRRDENKELLAGQLAKFEELRDGFRG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HQV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 187 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7CX01 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 187 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 187 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HQV MSE A 14 ? UNP Q7CX01 MET 14 'MODIFIED RESIDUE' 14 1 1 2HQV MSE A 79 ? UNP Q7CX01 MET 79 'MODIFIED RESIDUE' 79 2 1 2HQV MSE A 87 ? UNP Q7CX01 MET 87 'MODIFIED RESIDUE' 87 3 1 2HQV MSE A 150 ? UNP Q7CX01 MET 150 'MODIFIED RESIDUE' 150 4 1 2HQV MSE A 157 ? UNP Q7CX01 MET 157 'MODIFIED RESIDUE' 157 5 1 2HQV LEU A 188 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 188 6 1 2HQV GLU A 189 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 189 7 1 2HQV HIS A 190 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 190 8 1 2HQV HIS A 191 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 191 9 1 2HQV HIS A 192 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 192 10 1 2HQV HIS A 193 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 193 11 1 2HQV HIS A 194 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 194 12 1 2HQV HIS A 195 ? UNP Q7CX01 ? ? 'CLONING ARTIFACT' 195 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2HQV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_percent_sol 57.57 _exptl_crystal.description 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '40% PEG 400, 0.1M Magnesium sulfate, 0.1M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-07-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97960 1.0 2 0.97923 1.0 3 0.97947 1.0 4 0.96783 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97960, 0.97923, 0.97947, 0.96783' # _reflns.entry_id 2HQV _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 32911 _reflns.number_all 32944 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.5 _reflns.B_iso_Wilson_estimate 21.3 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.544 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2HQV _refine.ls_number_reflns_obs 29683 _refine.ls_number_reflns_all 31917 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 109456.86 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.76 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 90.3 _refine.ls_R_factor_obs 0.241 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.269 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.0 _refine.ls_number_reflns_R_free 1201 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 42.0 _refine.aniso_B[1][1] -8.28 _refine.aniso_B[2][2] -3.91 _refine.aniso_B[3][3] 12.19 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.368725 _refine.solvent_model_param_bsol 55.1963 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE FRIEDEL PAIRS WERE USED FOR REFINEMENT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2HQV _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.08 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.32 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1266 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 67 _refine_hist.number_atoms_total 1333 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 29.76 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.76 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 3915 _refine_ls_shell.R_factor_R_work 0.241 _refine_ls_shell.percent_reflns_obs 74.9 _refine_ls_shell.R_factor_R_free 0.244 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 4.3 _refine_ls_shell.number_reflns_R_free 178 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2HQV _struct.title ;X-ray Crystal Structure of Protein AGR_C_4470 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR92. ; _struct.pdbx_descriptor AGR_C_4470p _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HQV _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;NESG, AtR92, AGR_C_4470, Q7CX01_AGRT5, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'Dimer. The second part of the dimer is generated by -X, -Y, Z + (1 0 0) operator.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 15 ? LEU A 33 ? SER A 15 LEU A 33 1 ? 19 HELX_P HELX_P2 2 ALA A 51 ? ALA A 57 ? ALA A 51 ALA A 57 1 ? 7 HELX_P HELX_P3 3 ARG A 71 ? ARG A 80 ? ARG A 71 ARG A 80 1 ? 10 HELX_P HELX_P4 4 LYS A 125 ? ASP A 127 ? LYS A 125 ASP A 127 5 ? 3 HELX_P HELX_P5 5 LEU A 171 ? ARG A 186 ? LEU A 171 ARG A 186 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PRO 13 C ? ? ? 1_555 A MSE 14 N ? ? A PRO 13 A MSE 14 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 14 C ? ? ? 1_555 A SER 15 N ? ? A MSE 14 A SER 15 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A GLU 78 C ? ? ? 1_555 A MSE 79 N ? ? A GLU 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 79 C ? ? ? 1_555 A ARG 80 N ? ? A MSE 79 A ARG 80 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A LEU 86 C ? ? ? 1_555 A MSE 87 N ? ? A LEU 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A MSE 87 C ? ? ? 1_555 A ILE 88 N ? ? A MSE 87 A ILE 88 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A PHE 149 C ? ? ? 1_555 A MSE 150 N ? ? A PHE 149 A MSE 150 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A MSE 150 C ? ? ? 1_555 A ASN 151 N ? ? A MSE 150 A ASN 151 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? A ALA 156 C ? ? ? 1_555 A MSE 157 N ? ? A ALA 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? A MSE 157 C ? ? ? 1_555 A PHE 158 N ? ? A MSE 157 A PHE 158 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 64 ? PRO A 68 ? ALA A 64 PRO A 68 A 2 CYS A 129 ? PHE A 139 ? CYS A 129 PHE A 139 A 3 ARG A 142 ? ASN A 151 ? ARG A 142 ASN A 151 A 4 ALA A 156 ? PHE A 161 ? ALA A 156 PHE A 161 A 5 ILE A 85 ? GLN A 90 ? ILE A 85 GLN A 90 A 6 VAL A 95 ? GLY A 100 ? VAL A 95 GLY A 100 B 1 GLY A 105 ? SER A 108 ? GLY A 105 SER A 108 B 2 TRP A 111 ? ILE A 114 ? TRP A 111 ILE A 114 B 3 GLY A 122 ? ILE A 124 ? GLY A 122 ILE A 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 65 ? N VAL A 65 O PHE A 134 ? O PHE A 134 A 2 3 N PHE A 139 ? N PHE A 139 O ARG A 142 ? O ARG A 142 A 3 4 N PHE A 149 ? N PHE A 149 O MSE A 157 ? O MSE A 157 A 4 5 O PHE A 161 ? O PHE A 161 N LEU A 86 ? N LEU A 86 A 5 6 N MSE A 87 ? N MSE A 87 O VAL A 98 ? O VAL A 98 B 1 2 N THR A 106 ? N THR A 106 O ASN A 113 ? O ASN A 113 B 2 3 N PHE A 112 ? N PHE A 112 O ILE A 124 ? O ILE A 124 # _database_PDB_matrix.entry_id 2HQV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HQV _atom_sites.fract_transf_matrix[1][1] 0.015097 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013827 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009549 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ILE 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 LEU 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 PRO 9 9 ? ? ? A . n A 1 10 GLU 10 10 ? ? ? A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 MSE 14 14 14 MSE MSE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ARG 25 25 25 ARG ALA A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLU 35 35 35 GLU ALA A . n A 1 36 LYS 36 36 36 LYS ALA A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 ? ? ? A . n A 1 39 GLY 39 39 ? ? ? A . n A 1 40 ILE 40 40 ? ? ? A . n A 1 41 VAL 41 41 ? ? ? A . n A 1 42 GLU 42 42 42 GLU ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 LYS 47 47 47 LYS ALA A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 GLU 49 49 49 GLU ALA A . n A 1 50 VAL 50 50 50 VAL ALA A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 TRP 76 76 76 TRP TRP A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 MSE 79 79 79 MSE MSE A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 MSE 87 87 87 MSE MSE A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 CYS 129 129 129 CYS CYS A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 PHE 139 139 139 PHE ALA A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 ARG 142 142 142 ARG ALA A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 CYS 145 145 145 CYS CYS A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 MSE 150 150 150 MSE MSE A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 MSE 157 157 157 MSE MSE A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 GLU 166 166 166 GLU ALA A . n A 1 167 ASN 167 167 167 ASN ASN A . n A 1 168 LYS 168 168 168 LYS ALA A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 ARG 186 186 186 ARG ALA A . n A 1 187 GLY 187 187 ? ? ? A . n A 1 188 LEU 188 188 ? ? ? A . n A 1 189 GLU 189 189 ? ? ? A . n A 1 190 HIS 190 190 ? ? ? A . n A 1 191 HIS 191 191 ? ? ? A . n A 1 192 HIS 192 192 ? ? ? A . n A 1 193 HIS 193 193 ? ? ? A . n A 1 194 HIS 194 194 ? ? ? A . n A 1 195 HIS 195 195 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 14 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 79 ? MET SELENOMETHIONINE 3 A MSE 87 A MSE 87 ? MET SELENOMETHIONINE 4 A MSE 150 A MSE 150 ? MET SELENOMETHIONINE 5 A MSE 157 A MSE 157 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 66.2390000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 SHELXD phasing . ? 4 SHELXE 'model building' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 46 ? ? -68.64 56.96 2 1 VAL A 50 ? ? -132.80 -156.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 25 ? CG ? A ARG 25 CG 2 1 Y 1 A ARG 25 ? CD ? A ARG 25 CD 3 1 Y 1 A ARG 25 ? NE ? A ARG 25 NE 4 1 Y 1 A ARG 25 ? CZ ? A ARG 25 CZ 5 1 Y 1 A ARG 25 ? NH1 ? A ARG 25 NH1 6 1 Y 1 A ARG 25 ? NH2 ? A ARG 25 NH2 7 1 Y 1 A GLU 35 ? CG ? A GLU 35 CG 8 1 Y 1 A GLU 35 ? CD ? A GLU 35 CD 9 1 Y 1 A GLU 35 ? OE1 ? A GLU 35 OE1 10 1 Y 1 A GLU 35 ? OE2 ? A GLU 35 OE2 11 1 Y 1 A LYS 36 ? CG ? A LYS 36 CG 12 1 Y 1 A LYS 36 ? CD ? A LYS 36 CD 13 1 Y 1 A LYS 36 ? CE ? A LYS 36 CE 14 1 Y 1 A LYS 36 ? NZ ? A LYS 36 NZ 15 1 Y 1 A GLU 42 ? CG ? A GLU 42 CG 16 1 Y 1 A GLU 42 ? CD ? A GLU 42 CD 17 1 Y 1 A GLU 42 ? OE1 ? A GLU 42 OE1 18 1 Y 1 A GLU 42 ? OE2 ? A GLU 42 OE2 19 1 Y 1 A LYS 47 ? CG ? A LYS 47 CG 20 1 Y 1 A LYS 47 ? CD ? A LYS 47 CD 21 1 Y 1 A LYS 47 ? CE ? A LYS 47 CE 22 1 Y 1 A LYS 47 ? NZ ? A LYS 47 NZ 23 1 Y 1 A GLU 49 ? CG ? A GLU 49 CG 24 1 Y 1 A GLU 49 ? CD ? A GLU 49 CD 25 1 Y 1 A GLU 49 ? OE1 ? A GLU 49 OE1 26 1 Y 1 A GLU 49 ? OE2 ? A GLU 49 OE2 27 1 Y 1 A VAL 50 ? CG1 ? A VAL 50 CG1 28 1 Y 1 A VAL 50 ? CG2 ? A VAL 50 CG2 29 1 Y 1 A PHE 139 ? CG ? A PHE 139 CG 30 1 Y 1 A PHE 139 ? CD1 ? A PHE 139 CD1 31 1 Y 1 A PHE 139 ? CD2 ? A PHE 139 CD2 32 1 Y 1 A PHE 139 ? CE1 ? A PHE 139 CE1 33 1 Y 1 A PHE 139 ? CE2 ? A PHE 139 CE2 34 1 Y 1 A PHE 139 ? CZ ? A PHE 139 CZ 35 1 Y 1 A ARG 142 ? CG ? A ARG 142 CG 36 1 Y 1 A ARG 142 ? CD ? A ARG 142 CD 37 1 Y 1 A ARG 142 ? NE ? A ARG 142 NE 38 1 Y 1 A ARG 142 ? CZ ? A ARG 142 CZ 39 1 Y 1 A ARG 142 ? NH1 ? A ARG 142 NH1 40 1 Y 1 A ARG 142 ? NH2 ? A ARG 142 NH2 41 1 Y 1 A GLU 166 ? CG ? A GLU 166 CG 42 1 Y 1 A GLU 166 ? CD ? A GLU 166 CD 43 1 Y 1 A GLU 166 ? OE1 ? A GLU 166 OE1 44 1 Y 1 A GLU 166 ? OE2 ? A GLU 166 OE2 45 1 Y 1 A LYS 168 ? CG ? A LYS 168 CG 46 1 Y 1 A LYS 168 ? CD ? A LYS 168 CD 47 1 Y 1 A LYS 168 ? CE ? A LYS 168 CE 48 1 Y 1 A LYS 168 ? NZ ? A LYS 168 NZ 49 1 Y 1 A ARG 186 ? CG ? A ARG 186 CG 50 1 Y 1 A ARG 186 ? CD ? A ARG 186 CD 51 1 Y 1 A ARG 186 ? NE ? A ARG 186 NE 52 1 Y 1 A ARG 186 ? CZ ? A ARG 186 CZ 53 1 Y 1 A ARG 186 ? NH1 ? A ARG 186 NH1 54 1 Y 1 A ARG 186 ? NH2 ? A ARG 186 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ILE 5 ? A ILE 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A LEU 7 ? A LEU 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A PRO 9 ? A PRO 9 10 1 Y 1 A GLU 10 ? A GLU 10 11 1 Y 1 A ASP 38 ? A ASP 38 12 1 Y 1 A GLY 39 ? A GLY 39 13 1 Y 1 A ILE 40 ? A ILE 40 14 1 Y 1 A VAL 41 ? A VAL 41 15 1 Y 1 A GLY 187 ? A GLY 187 16 1 Y 1 A LEU 188 ? A LEU 188 17 1 Y 1 A GLU 189 ? A GLU 189 18 1 Y 1 A HIS 190 ? A HIS 190 19 1 Y 1 A HIS 191 ? A HIS 191 20 1 Y 1 A HIS 192 ? A HIS 192 21 1 Y 1 A HIS 193 ? A HIS 193 22 1 Y 1 A HIS 194 ? A HIS 194 23 1 Y 1 A HIS 195 ? A HIS 195 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 201 HOH WAT A . B 2 HOH 2 202 202 HOH WAT A . B 2 HOH 3 203 203 HOH WAT A . B 2 HOH 4 204 204 HOH WAT A . B 2 HOH 5 205 205 HOH WAT A . B 2 HOH 6 206 206 HOH WAT A . B 2 HOH 7 207 207 HOH WAT A . B 2 HOH 8 208 208 HOH WAT A . B 2 HOH 9 209 209 HOH WAT A . B 2 HOH 10 210 210 HOH WAT A . B 2 HOH 11 211 211 HOH WAT A . B 2 HOH 12 212 212 HOH WAT A . B 2 HOH 13 213 213 HOH WAT A . B 2 HOH 14 214 214 HOH WAT A . B 2 HOH 15 215 215 HOH WAT A . B 2 HOH 16 216 216 HOH WAT A . B 2 HOH 17 217 217 HOH WAT A . B 2 HOH 18 218 218 HOH WAT A . B 2 HOH 19 219 219 HOH WAT A . B 2 HOH 20 220 220 HOH WAT A . B 2 HOH 21 221 221 HOH WAT A . B 2 HOH 22 222 222 HOH WAT A . B 2 HOH 23 223 223 HOH WAT A . B 2 HOH 24 224 224 HOH WAT A . B 2 HOH 25 225 225 HOH WAT A . B 2 HOH 26 226 226 HOH WAT A . B 2 HOH 27 227 227 HOH WAT A . B 2 HOH 28 228 228 HOH WAT A . B 2 HOH 29 229 229 HOH WAT A . B 2 HOH 30 230 230 HOH WAT A . B 2 HOH 31 231 231 HOH WAT A . B 2 HOH 32 232 232 HOH WAT A . B 2 HOH 33 233 233 HOH WAT A . B 2 HOH 34 234 234 HOH WAT A . B 2 HOH 35 236 236 HOH WAT A . B 2 HOH 36 237 237 HOH WAT A . B 2 HOH 37 238 238 HOH WAT A . B 2 HOH 38 239 239 HOH WAT A . B 2 HOH 39 240 240 HOH WAT A . B 2 HOH 40 241 241 HOH WAT A . B 2 HOH 41 242 242 HOH WAT A . B 2 HOH 42 243 243 HOH WAT A . B 2 HOH 43 244 244 HOH WAT A . B 2 HOH 44 245 245 HOH WAT A . B 2 HOH 45 246 246 HOH WAT A . B 2 HOH 46 247 247 HOH WAT A . B 2 HOH 47 248 248 HOH WAT A . B 2 HOH 48 249 249 HOH WAT A . B 2 HOH 49 250 250 HOH WAT A . B 2 HOH 50 251 251 HOH WAT A . B 2 HOH 51 252 252 HOH WAT A . B 2 HOH 52 253 253 HOH WAT A . B 2 HOH 53 254 254 HOH WAT A . B 2 HOH 54 255 255 HOH WAT A . B 2 HOH 55 256 256 HOH WAT A . B 2 HOH 56 257 257 HOH WAT A . B 2 HOH 57 258 258 HOH WAT A . B 2 HOH 58 259 259 HOH WAT A . B 2 HOH 59 260 260 HOH WAT A . B 2 HOH 60 261 261 HOH WAT A . B 2 HOH 61 262 262 HOH WAT A . B 2 HOH 62 263 263 HOH WAT A . B 2 HOH 63 264 264 HOH WAT A . B 2 HOH 64 265 265 HOH WAT A . B 2 HOH 65 266 266 HOH WAT A . B 2 HOH 66 269 269 HOH WAT A . B 2 HOH 67 270 270 HOH WAT A . #