HEADER TRANSFERASE 24-JUL-06 2HSW TITLE CRYSTAL STRUCTURE OF THE URIDINE PHOSPHORYLASE FROM SALMONELLA TITLE 2 TYPHIMURIUM IN UNLIGANDED STATE AT 1.99A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIDINE PHOSPHORYLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: URDPASE, UPASE; COMPND 5 EC: 2.4.2.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 99287; SOURCE 4 STRAIN: LT2; SOURCE 5 GENE: UDP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBLUESCRIPT IISK KEYWDS NUCLEOSIDE PHOSPHORYLASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.I.TIMOFEEV,M.V.DONTSOVA,A.G.GABDOULKHAKOV,A.M.MIKHAILOV REVDAT 4 14-FEB-24 2HSW 1 REMARK REVDAT 3 13-JUL-11 2HSW 1 VERSN REVDAT 2 24-FEB-09 2HSW 1 VERSN REVDAT 1 24-JUL-07 2HSW 0 JRNL AUTH V.I.TIMOFEEV,M.V.DONTSOVA,A.G.GABDOULKHAKOV,A.M.MIKHAILOV, JRNL AUTH 2 A.A.LASHKOV,V.VOELTER,G.S.KACHALOVA JRNL TITL CRYSTAL STRUCTURE OF THE URIDINE PHOSPHORYLASE FROM JRNL TITL 2 SALMONELLA TYPHIMURIUM IN UNLIGANDED STATE AT 1.99A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0003 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1389 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1877 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3503 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.81000 REMARK 3 B22 (A**2) : -1.81000 REMARK 3 B33 (A**2) : 2.72000 REMARK 3 B12 (A**2) : -0.91000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3561 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4833 ; 1.287 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 5.421 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;36.758 ;23.796 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 592 ;16.600 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;16.018 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 580 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2629 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1565 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2425 ; 0.295 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 162 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 73 ; 0.175 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.116 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2397 ; 1.016 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3738 ; 1.244 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1301 ; 2.157 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1095 ; 2.693 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3698 ; 1.985 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 140 ; 4.132 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3508 ; 1.443 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038721. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26389 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 75.83000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.78047 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 15.97333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 75.83000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 43.78047 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 15.97333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 75.83000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 43.78047 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 15.97333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 87.56094 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 31.94667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 87.56094 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 31.94667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 87.56094 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 31.94667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HEXAMER GENERATED FROM THE REMARK 300 DIMER, WHICH PRESENTED IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 16410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 75.83000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 131.34141 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -75.83000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 131.34141 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1001 REMARK 465 SER A 1002 REMARK 465 LYS A 1003 REMARK 465 MET B 1001 REMARK 465 SER B 1002 REMARK 465 LYS B 1003 REMARK 465 GLY B 1165 REMARK 465 GLN B 1166 REMARK 465 GLU B 1167 REMARK 465 ARG B 1168 REMARK 465 TYR B 1169 REMARK 465 ASP B 1170 REMARK 465 THR B 1171 REMARK 465 TYR B 1172 REMARK 465 SER B 1173 REMARK 465 GLY B 1174 REMARK 465 ARG B 1175 REMARK 465 VAL B 1176 REMARK 465 VAL B 1177 REMARK 465 ARG B 1178 REMARK 465 ARG B 1179 REMARK 465 PHE B 1180 REMARK 465 LYS B 1181 REMARK 465 GLY B 1182 REMARK 465 SER B 1183 REMARK 465 GLN B 1226 REMARK 465 GLU B 1227 REMARK 465 ILE B 1228 REMARK 465 PRO B 1229 REMARK 465 ASN B 1230 REMARK 465 ALA B 1231 REMARK 465 GLU B 1232 REMARK 465 THR B 1233 REMARK 465 MET B 1234 REMARK 465 LYS B 1235 REMARK 465 GLN B 1236 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A1034 CD1 REMARK 470 ILE A1092 CD1 REMARK 470 ILE A1098 CD1 REMARK 470 ILE B1063 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1048 -123.83 56.09 REMARK 500 LEU A1116 42.61 -97.76 REMARK 500 TYR A1163 -78.94 -101.14 REMARK 500 ARG B1048 -132.59 50.39 REMARK 500 TYR B1163 -81.70 -104.22 REMARK 500 GLU B1185 28.47 -72.22 REMARK 500 THR B1224 68.37 -103.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 9002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2HRD RELATED DB: PDB REMARK 900 RELATED ID: 2HN9 RELATED DB: PDB DBREF 2HSW A 1001 1253 UNP P0A1F6 UDP_SALTY 0 252 DBREF 2HSW B 1001 1253 UNP P0A1F6 UDP_SALTY 0 252 SEQRES 1 A 253 MET SER LYS SER ASP VAL PHE HIS LEU GLY LEU THR LYS SEQRES 2 A 253 ASN ASP LEU GLN GLY ALA GLN LEU ALA ILE VAL PRO GLY SEQRES 3 A 253 ASP PRO GLU ARG VAL GLU LYS ILE ALA ALA LEU MET ASP SEQRES 4 A 253 LYS PRO VAL LYS LEU ALA SER HIS ARG GLU PHE THR SER SEQRES 5 A 253 TRP ARG ALA GLU LEU ASP GLY LYS ALA VAL ILE VAL CYS SEQRES 6 A 253 SER THR GLY ILE GLY GLY PRO SER THR SER ILE ALA VAL SEQRES 7 A 253 GLU GLU LEU ALA GLN LEU GLY ILE ARG THR PHE LEU ARG SEQRES 8 A 253 ILE GLY THR THR GLY ALA ILE GLN PRO HIS ILE ASN VAL SEQRES 9 A 253 GLY ASP VAL LEU VAL THR THR ALA SER VAL ARG LEU ASP SEQRES 10 A 253 GLY ALA SER LEU HIS PHE ALA PRO MET GLU PHE PRO ALA SEQRES 11 A 253 VAL ALA ASP PHE ALA CYS THR THR ALA LEU VAL GLU ALA SEQRES 12 A 253 ALA LYS SER ILE GLY ALA THR THR HIS VAL GLY VAL THR SEQRES 13 A 253 ALA SER SER ASP THR PHE TYR PRO GLY GLN GLU ARG TYR SEQRES 14 A 253 ASP THR TYR SER GLY ARG VAL VAL ARG ARG PHE LYS GLY SEQRES 15 A 253 SER MET GLU GLU TRP GLN ALA MET GLY VAL MET ASN TYR SEQRES 16 A 253 GLU MET GLU SER ALA THR LEU LEU THR MET CYS ALA SER SEQRES 17 A 253 GLN GLY LEU ARG ALA GLY MET VAL ALA GLY VAL ILE VAL SEQRES 18 A 253 ASN ARG THR GLN GLN GLU ILE PRO ASN ALA GLU THR MET SEQRES 19 A 253 LYS GLN THR GLU SER HIS ALA VAL LYS ILE VAL VAL GLU SEQRES 20 A 253 ALA ALA ARG ARG LEU LEU SEQRES 1 B 253 MET SER LYS SER ASP VAL PHE HIS LEU GLY LEU THR LYS SEQRES 2 B 253 ASN ASP LEU GLN GLY ALA GLN LEU ALA ILE VAL PRO GLY SEQRES 3 B 253 ASP PRO GLU ARG VAL GLU LYS ILE ALA ALA LEU MET ASP SEQRES 4 B 253 LYS PRO VAL LYS LEU ALA SER HIS ARG GLU PHE THR SER SEQRES 5 B 253 TRP ARG ALA GLU LEU ASP GLY LYS ALA VAL ILE VAL CYS SEQRES 6 B 253 SER THR GLY ILE GLY GLY PRO SER THR SER ILE ALA VAL SEQRES 7 B 253 GLU GLU LEU ALA GLN LEU GLY ILE ARG THR PHE LEU ARG SEQRES 8 B 253 ILE GLY THR THR GLY ALA ILE GLN PRO HIS ILE ASN VAL SEQRES 9 B 253 GLY ASP VAL LEU VAL THR THR ALA SER VAL ARG LEU ASP SEQRES 10 B 253 GLY ALA SER LEU HIS PHE ALA PRO MET GLU PHE PRO ALA SEQRES 11 B 253 VAL ALA ASP PHE ALA CYS THR THR ALA LEU VAL GLU ALA SEQRES 12 B 253 ALA LYS SER ILE GLY ALA THR THR HIS VAL GLY VAL THR SEQRES 13 B 253 ALA SER SER ASP THR PHE TYR PRO GLY GLN GLU ARG TYR SEQRES 14 B 253 ASP THR TYR SER GLY ARG VAL VAL ARG ARG PHE LYS GLY SEQRES 15 B 253 SER MET GLU GLU TRP GLN ALA MET GLY VAL MET ASN TYR SEQRES 16 B 253 GLU MET GLU SER ALA THR LEU LEU THR MET CYS ALA SER SEQRES 17 B 253 GLN GLY LEU ARG ALA GLY MET VAL ALA GLY VAL ILE VAL SEQRES 18 B 253 ASN ARG THR GLN GLN GLU ILE PRO ASN ALA GLU THR MET SEQRES 19 B 253 LYS GLN THR GLU SER HIS ALA VAL LYS ILE VAL VAL GLU SEQRES 20 B 253 ALA ALA ARG ARG LEU LEU HET PO4 A9002 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 O4 P 3- FORMUL 4 HOH *140(H2 O) HELIX 1 1 LYS A 1013 GLN A 1017 5 5 HELIX 2 2 ASP A 1027 GLU A 1029 5 3 HELIX 3 3 ARG A 1030 ALA A 1036 1 7 HELIX 4 4 GLY A 1070 LEU A 1084 1 15 HELIX 5 5 GLY A 1118 PHE A 1123 5 6 HELIX 6 6 ASP A 1133 GLY A 1148 1 16 HELIX 7 7 TYR A 1163 GLU A 1167 5 5 HELIX 8 8 VAL A 1177 LYS A 1181 5 5 HELIX 9 9 GLY A 1182 GLY A 1191 1 10 HELIX 10 10 GLU A 1198 GLN A 1209 1 12 HELIX 11 11 ASN A 1230 ARG A 1251 1 22 HELIX 12 12 LYS B 1013 GLN B 1017 5 5 HELIX 13 13 ASP B 1027 LEU B 1037 1 11 HELIX 14 14 ILE B 1069 LEU B 1084 1 16 HELIX 15 15 GLY B 1118 PHE B 1123 5 6 HELIX 16 16 ASP B 1133 ILE B 1147 1 15 HELIX 17 17 GLU B 1185 MET B 1190 1 6 HELIX 18 18 GLU B 1198 SER B 1208 1 11 HELIX 19 19 GLU B 1238 LEU B 1253 1 16 SHEET 1 A 9 ASP A1039 HIS A1047 0 SHEET 2 A 9 PHE A1050 LEU A1057 -1 O ARG A1054 N VAL A1042 SHEET 3 A 9 LYS A1060 CYS A1065 -1 O VAL A1064 N TRP A1053 SHEET 4 A 9 LEU A1021 ILE A1023 1 N ILE A1023 O ILE A1063 SHEET 5 A 9 THR A1088 ALA A1097 1 O THR A1088 N ALA A1022 SHEET 6 A 9 ASN A1194 GLU A1196 -1 O TYR A1195 N GLY A1096 SHEET 7 A 9 THR A1151 SER A1159 1 N SER A1159 O GLU A1196 SHEET 8 A 9 VAL A1107 LEU A1116 1 N VAL A1114 O THR A1156 SHEET 9 A 9 ALA A1130 VAL A1131 -1 O ALA A1130 N SER A1113 SHEET 1 B 8 ASP A1039 HIS A1047 0 SHEET 2 B 8 PHE A1050 LEU A1057 -1 O ARG A1054 N VAL A1042 SHEET 3 B 8 LYS A1060 CYS A1065 -1 O VAL A1064 N TRP A1053 SHEET 4 B 8 LEU A1021 ILE A1023 1 N ILE A1023 O ILE A1063 SHEET 5 B 8 THR A1088 ALA A1097 1 O THR A1088 N ALA A1022 SHEET 6 B 8 ARG A1212 ASN A1222 1 O ILE A1220 N THR A1095 SHEET 7 B 8 VAL A1107 LEU A1116 -1 N LEU A1108 O ALA A1217 SHEET 8 B 8 ALA A1130 VAL A1131 -1 O ALA A1130 N SER A1113 SHEET 1 C 9 ASP B1039 HIS B1047 0 SHEET 2 C 9 PHE B1050 LEU B1057 -1 O ARG B1054 N VAL B1042 SHEET 3 C 9 LYS B1060 CYS B1065 -1 O LYS B1060 N LEU B1057 SHEET 4 C 9 LEU B1021 ILE B1023 1 N ILE B1023 O ILE B1063 SHEET 5 C 9 THR B1088 ALA B1097 1 O THR B1088 N ALA B1022 SHEET 6 C 9 ASN B1194 GLU B1196 -1 O TYR B1195 N GLY B1096 SHEET 7 C 9 THR B1151 SER B1159 1 N ALA B1157 O ASN B1194 SHEET 8 C 9 VAL B1107 LEU B1116 1 N THR B1111 O GLY B1154 SHEET 9 C 9 ALA B1130 VAL B1131 -1 O ALA B1130 N SER B1113 SHEET 1 D 8 ASP B1039 HIS B1047 0 SHEET 2 D 8 PHE B1050 LEU B1057 -1 O ARG B1054 N VAL B1042 SHEET 3 D 8 LYS B1060 CYS B1065 -1 O LYS B1060 N LEU B1057 SHEET 4 D 8 LEU B1021 ILE B1023 1 N ILE B1023 O ILE B1063 SHEET 5 D 8 THR B1088 ALA B1097 1 O THR B1088 N ALA B1022 SHEET 6 D 8 ARG B1212 ASN B1222 1 O ILE B1220 N THR B1095 SHEET 7 D 8 VAL B1107 LEU B1116 -1 N LEU B1108 O ALA B1217 SHEET 8 D 8 ALA B1130 VAL B1131 -1 O ALA B1130 N SER B1113 SITE 1 AC1 4 ILE B1102 ASN B1103 VAL B1104 GLN B1225 CRYST1 151.660 151.660 47.920 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006594 0.003807 0.000000 0.00000 SCALE2 0.000000 0.007614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020868 0.00000