HEADER OXIDOREDUCTASE 24-JUL-06 2HSY TITLE SOLUTION STRUCTURE OF THIOREDOXIN 2 FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TR-II, THIOREDOXIN 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS OXIDOREDUCTASE, THIOREDOXIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.C.AMORIM,A.P.VALENTE,F.C.L.ALMEIDA REVDAT 5 09-MAR-22 2HSY 1 REMARK REVDAT 4 24-FEB-09 2HSY 1 VERSN REVDAT 3 29-MAY-07 2HSY 3 ATOM REVDAT 2 29-MAY-07 2HSY 1 JRNL REVDAT 1 20-MAR-07 2HSY 0 JRNL AUTH G.C.AMORIM,A.S.PINHEIRO,L.E.S.NETTO,A.P.VALENTE, JRNL AUTH 2 F.C.L.ALMEIDA JRNL TITL NMR SOLUTION STRUCTURE OF THE REDUCED FORM OF THIOREDOXIN 2 JRNL TITL 2 FROM SACCHAROMYCES CEREVISIAE JRNL REF J.BIOMOL.NMR V. 38 99 2007 JRNL REFN ISSN 0925-2738 JRNL PMID 17340205 JRNL DOI 10.1007/S10858-007-9144-Z REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.S.PINHEIRO,G.C.AMORIM,L.E.S.NETTO,A.P.VALENTE, REMARK 1 AUTH 2 F.C.L.ALMEIDA REMARK 1 TITL (1)H, (13)C AND (15)N RESONANCE ASSIGNMENTS FOR THE REDUCED REMARK 1 TITL 2 FORMS OF THIOREDOXIN 1 AND 2 FROM S. CEREVISIAE REMARK 1 REF J.BIOMOL.NMR V.PL 5 35 2006 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 16609834 REMARK 1 DOI 10.1007/S10858-006-0025-7 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CARTESIAN SIMULATED ANNEALING REMARK 4 REMARK 4 2HSY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038723. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20MM PHOSPHATE BUFFER NA; 10MM REMARK 210 DTT; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N_NOESY-HSQC; 3D_13C_NOESY REMARK 210 -HSQC; 2D NOESY; HNCA-J REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 93 H ILE A 96 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 16 -86.61 -74.33 REMARK 500 1 LYS A 20 -168.29 -57.95 REMARK 500 1 CYS A 31 109.24 165.11 REMARK 500 1 MET A 40 -75.89 -53.08 REMARK 500 1 ASP A 57 -96.73 -107.29 REMARK 500 1 VAL A 58 -69.86 -156.20 REMARK 500 1 SER A 62 -7.82 75.28 REMARK 500 1 ASP A 63 -64.32 -90.36 REMARK 500 1 SER A 72 -163.69 -170.33 REMARK 500 1 MET A 73 90.92 -170.10 REMARK 500 1 THR A 86 77.80 -113.46 REMARK 500 1 VAL A 88 83.48 -150.95 REMARK 500 1 ALA A 91 91.75 -179.72 REMARK 500 1 ASN A 92 123.37 -178.16 REMARK 500 2 VAL A 2 125.50 63.72 REMARK 500 2 LYS A 6 -58.30 -133.52 REMARK 500 2 TYR A 11 -71.84 -61.95 REMARK 500 2 ALA A 16 -82.13 -89.92 REMARK 500 2 SER A 17 30.42 -90.54 REMARK 500 2 ASP A 19 -45.67 -159.57 REMARK 500 2 LYS A 20 -170.85 -59.43 REMARK 500 2 TRP A 30 -60.38 -105.32 REMARK 500 2 CYS A 31 90.22 159.07 REMARK 500 2 PRO A 33 -155.97 -79.79 REMARK 500 2 CYS A 34 -68.81 42.04 REMARK 500 2 ILE A 37 34.50 -90.16 REMARK 500 2 MET A 40 -71.45 -50.07 REMARK 500 2 ASP A 57 -128.38 -101.42 REMARK 500 2 VAL A 58 -70.13 -126.58 REMARK 500 2 SER A 72 95.97 50.69 REMARK 500 2 LYS A 80 67.73 -153.41 REMARK 500 2 LYS A 83 115.83 -178.18 REMARK 500 2 ALA A 91 68.22 -179.93 REMARK 500 2 GLN A 98 -33.59 -39.01 REMARK 500 3 ALA A 16 -79.27 -65.40 REMARK 500 3 LYS A 20 -82.51 -54.92 REMARK 500 3 LEU A 21 107.99 -177.83 REMARK 500 3 THR A 29 70.83 49.18 REMARK 500 3 CYS A 31 -104.35 -139.57 REMARK 500 3 MET A 40 -79.18 -54.17 REMARK 500 3 ASP A 57 -109.50 -106.33 REMARK 500 3 VAL A 58 -48.75 -160.51 REMARK 500 3 VAL A 61 -68.78 -106.74 REMARK 500 3 SER A 71 91.98 -175.98 REMARK 500 3 SER A 72 -171.38 -178.22 REMARK 500 3 ALA A 91 92.13 173.62 REMARK 500 3 LYS A 97 -72.20 -65.44 REMARK 500 4 LYS A 6 -69.45 -133.68 REMARK 500 4 LYS A 20 -108.97 -60.92 REMARK 500 4 THR A 29 70.14 46.81 REMARK 500 REMARK 500 THIS ENTRY HAS 309 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2HSY A 1 104 UNP P22803 TRX2_YEAST 0 103 SEQRES 1 A 104 MET VAL THR GLN LEU LYS SER ALA SER GLU TYR ASP SER SEQRES 2 A 104 ALA LEU ALA SER GLY ASP LYS LEU VAL VAL VAL ASP PHE SEQRES 3 A 104 PHE ALA THR TRP CYS GLY PRO CYS LYS MET ILE ALA PRO SEQRES 4 A 104 MET ILE GLU LYS PHE ALA GLU GLN TYR SER ASP ALA ALA SEQRES 5 A 104 PHE TYR LYS LEU ASP VAL ASP GLU VAL SER ASP VAL ALA SEQRES 6 A 104 GLN LYS ALA GLU VAL SER SER MET PRO THR LEU ILE PHE SEQRES 7 A 104 TYR LYS GLY GLY LYS GLU VAL THR ARG VAL VAL GLY ALA SEQRES 8 A 104 ASN PRO ALA ALA ILE LYS GLN ALA ILE ALA SER ASN VAL HELIX 1 1 SER A 7 SER A 17 1 11 HELIX 2 2 GLY A 32 ILE A 37 1 6 HELIX 3 3 ILE A 37 ALA A 45 1 9 HELIX 4 4 ASP A 63 ALA A 68 1 6 HELIX 5 5 PRO A 93 VAL A 104 1 12 SHEET 1 A 4 VAL A 2 GLN A 4 0 SHEET 2 A 4 ALA A 51 LEU A 56 1 O PHE A 53 N THR A 3 SHEET 3 A 4 LEU A 21 PHE A 26 1 N VAL A 23 O ALA A 52 SHEET 4 A 4 THR A 75 TYR A 79 -1 O TYR A 79 N VAL A 22 CISPEP 1 MET A 73 PRO A 74 1 -0.15 CISPEP 2 MET A 73 PRO A 74 2 0.24 CISPEP 3 MET A 73 PRO A 74 3 0.08 CISPEP 4 MET A 73 PRO A 74 4 -0.15 CISPEP 5 MET A 73 PRO A 74 5 -0.16 CISPEP 6 MET A 73 PRO A 74 6 -0.02 CISPEP 7 MET A 73 PRO A 74 7 0.58 CISPEP 8 MET A 73 PRO A 74 8 -0.17 CISPEP 9 MET A 73 PRO A 74 9 0.04 CISPEP 10 MET A 73 PRO A 74 10 0.77 CISPEP 11 MET A 73 PRO A 74 11 -0.04 CISPEP 12 MET A 73 PRO A 74 12 0.13 CISPEP 13 MET A 73 PRO A 74 13 -0.14 CISPEP 14 MET A 73 PRO A 74 14 0.15 CISPEP 15 MET A 73 PRO A 74 15 0.30 CISPEP 16 MET A 73 PRO A 74 16 -0.68 CISPEP 17 MET A 73 PRO A 74 17 -0.06 CISPEP 18 MET A 73 PRO A 74 18 -0.11 CISPEP 19 MET A 73 PRO A 74 19 -0.14 CISPEP 20 MET A 73 PRO A 74 20 0.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1