HEADER OXIDOREDUCTASE 25-JUL-06 2HT9 TITLE THE STRUCTURE OF DIMERIC HUMAN GLUTAREDOXIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAREDOXIN-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 41-164; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 12-MER PEPTIDE; COMPND 8 CHAIN: X; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GLRX2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 (PET DERIVATIVE); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: GLRX2; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 (PET DERIVATIVE); SOURCE 21 OTHER_DETAILS: A DEGRADATION PRODUCT OF THE PROTEIN KEYWDS THIOREDOXIN FOLD, IRON-SULFUR CLUSTER, 2FE2S, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.JOHANSSON,C.SMEE,K.L.KAVANAGH,J.DEBRECZENI,F.VON DELFT,O.GILEADI, AUTHOR 2 C.ARROWSMITH,J.WEIGELT,A.EDWARDS,M.SUNDSTROM,U.OPPERMANN,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 4 25-OCT-23 2HT9 1 REMARK SEQADV LINK REVDAT 3 05-DEC-12 2HT9 1 AUTHOR JRNL VERSN REVDAT 2 24-FEB-09 2HT9 1 VERSN REVDAT 1 29-AUG-06 2HT9 0 JRNL AUTH C.JOHANSSON,K.L.KAVANAGH,O.GILEADI,U.OPPERMANN JRNL TITL REVERSIBLE SEQUESTRATION OF ACTIVE SITE CYSTEINES IN A JRNL TITL 2 2FE-2S-BRIDGED DIMER PROVIDES A MECHANISM FOR GLUTAREDOXIN 2 JRNL TITL 3 REGULATION IN HUMAN MITOCHONDRIA JRNL REF J.BIOL.CHEM. V. 282 3077 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17121859 JRNL DOI 10.1074/JBC.M608179200 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 96.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 25063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1341 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1709 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1755 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.80000 REMARK 3 B22 (A**2) : 0.80000 REMARK 3 B33 (A**2) : -1.20000 REMARK 3 B12 (A**2) : 0.40000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.295 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1889 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1231 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2569 ; 1.448 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3035 ; 0.971 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 244 ; 5.975 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 77 ;35.085 ;24.416 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 320 ;12.937 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;11.432 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 300 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2092 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 370 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 343 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1152 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 906 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 915 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 83 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.138 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 46 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.122 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1189 ; 3.467 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 468 ; 1.046 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1879 ; 4.404 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 780 ; 6.980 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 678 ; 9.199 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4 ; 6.261 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4 ;15.612 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000038734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26417 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 96.674 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.41600 REMARK 200 R SYM FOR SHELL (I) : 0.41600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2FLS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M MGSO4, 100MM MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.82350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.82350 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.82350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 ASN A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 LEU A 9 REMARK 465 GLU A 10 REMARK 465 ASN A 11 REMARK 465 LYS A 116 REMARK 465 LYS A 117 REMARK 465 SER A 118 REMARK 465 LYS A 119 REMARK 465 ARG A 120 REMARK 465 LYS A 121 REMARK 465 GLU A 122 REMARK 465 PHE A 123 REMARK 465 GLN A 124 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 3 REMARK 465 ASN B 4 REMARK 465 THR B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 GLU B 10 REMARK 465 ASN B 11 REMARK 465 LEU B 12 REMARK 465 ALA B 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 74 NZ REMARK 470 LYS A 102 CD CE NZ REMARK 470 ASN B 18 OD1 ND2 REMARK 470 GLN B 19 CD OE1 NE2 REMARK 470 GLN B 21 CD OE1 NE2 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 TYR B 64 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN B 66 CG OD1 ND2 REMARK 470 GLN B 67 CG CD OE1 NE2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 GLU B 78 CD OE1 OE2 REMARK 470 LYS B 102 CD CE NZ REMARK 470 LYS B 119 CE NZ REMARK 470 ARG B 120 CZ NH1 NH2 REMARK 470 LYS B 121 NZ REMARK 470 LEU X -9 CG CD1 CD2 REMARK 470 ASN X -5 CG OD1 ND2 REMARK 470 GLN X -1 CG CD OE1 NE2 REMARK 470 GLU X 2 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 79 59.05 -98.60 REMARK 500 TYR B 64 46.14 -101.62 REMARK 500 PHE B 123 58.14 -113.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A1001 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 37 SG REMARK 620 2 FES A1001 S1 120.1 REMARK 620 3 FES A1001 S2 110.4 103.0 REMARK 620 4 GSH A 200 SG2 106.2 102.5 114.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A1001 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 37 SG REMARK 620 2 FES A1001 S1 119.4 REMARK 620 3 FES A1001 S2 112.7 102.8 REMARK 620 4 GSH B1200 SG2 104.8 102.8 114.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 1200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 1001 DBREF 2HT9 A 1 124 UNP Q9NS18 GLRX2_HUMAN 41 164 DBREF 2HT9 B 1 124 UNP Q9NS18 GLRX2_HUMAN 41 164 DBREF 2HT9 X -9 2 PDB 2HT9 2HT9 -9 2 SEQADV 2HT9 MET A -21 UNP Q9NS18 INITIATING METHIONINE SEQADV 2HT9 HIS A -20 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS A -19 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS A -18 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS A -17 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS A -16 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS A -15 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 SER A -14 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 SER A -13 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLY A -12 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 VAL A -11 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 ASP A -10 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 LEU A -9 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLY A -8 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 THR A -7 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLU A -6 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 ASN A -5 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 LEU A -4 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 TYR A -3 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 PHE A -2 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLN A -1 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 SER A 0 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 MET B -21 UNP Q9NS18 INITIATING METHIONINE SEQADV 2HT9 HIS B -20 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS B -19 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS B -18 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS B -17 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS B -16 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 HIS B -15 UNP Q9NS18 EXPRESSION TAG SEQADV 2HT9 SER B -14 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 SER B -13 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLY B -12 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 VAL B -11 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 ASP B -10 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 LEU B -9 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLY B -8 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 THR B -7 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLU B -6 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 ASN B -5 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 LEU B -4 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 TYR B -3 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 PHE B -2 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 GLN B -1 UNP Q9NS18 CLONING ARTIFACT SEQADV 2HT9 SER B 0 UNP Q9NS18 CLONING ARTIFACT SEQRES 1 A 146 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 146 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU SER ASN SEQRES 3 A 146 THR SER SER SER LEU GLU ASN LEU ALA THR ALA PRO VAL SEQRES 4 A 146 ASN GLN ILE GLN GLU THR ILE SER ASP ASN CYS VAL VAL SEQRES 5 A 146 ILE PHE SER LYS THR SER CYS SER TYR CYS THR MET ALA SEQRES 6 A 146 LYS LYS LEU PHE HIS ASP MET ASN VAL ASN TYR LYS VAL SEQRES 7 A 146 VAL GLU LEU ASP LEU LEU GLU TYR GLY ASN GLN PHE GLN SEQRES 8 A 146 ASP ALA LEU TYR LYS MET THR GLY GLU ARG THR VAL PRO SEQRES 9 A 146 ARG ILE PHE VAL ASN GLY THR PHE ILE GLY GLY ALA THR SEQRES 10 A 146 ASP THR HIS ARG LEU HIS LYS GLU GLY LYS LEU LEU PRO SEQRES 11 A 146 LEU VAL HIS GLN CYS TYR LEU LYS LYS SER LYS ARG LYS SEQRES 12 A 146 GLU PHE GLN SEQRES 1 B 146 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 146 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU SER ASN SEQRES 3 B 146 THR SER SER SER LEU GLU ASN LEU ALA THR ALA PRO VAL SEQRES 4 B 146 ASN GLN ILE GLN GLU THR ILE SER ASP ASN CYS VAL VAL SEQRES 5 B 146 ILE PHE SER LYS THR SER CYS SER TYR CYS THR MET ALA SEQRES 6 B 146 LYS LYS LEU PHE HIS ASP MET ASN VAL ASN TYR LYS VAL SEQRES 7 B 146 VAL GLU LEU ASP LEU LEU GLU TYR GLY ASN GLN PHE GLN SEQRES 8 B 146 ASP ALA LEU TYR LYS MET THR GLY GLU ARG THR VAL PRO SEQRES 9 B 146 ARG ILE PHE VAL ASN GLY THR PHE ILE GLY GLY ALA THR SEQRES 10 B 146 ASP THR HIS ARG LEU HIS LYS GLU GLY LYS LEU LEU PRO SEQRES 11 B 146 LEU VAL HIS GLN CYS TYR LEU LYS LYS SER LYS ARG LYS SEQRES 12 B 146 GLU PHE GLN SEQRES 1 X 12 LEU GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU HET GSH A 200 20 HET FES A1001 4 HET GSH B1200 20 HETNAM GSH GLUTATHIONE HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 4 GSH 2(C10 H17 N3 O6 S) FORMUL 5 FES FE2 S2 FORMUL 7 HOH *107(H2 O) HELIX 1 1 PRO A 16 ASN A 27 1 12 HELIX 2 2 CYS A 37 ASN A 51 1 15 HELIX 3 3 ASP A 60 LEU A 62 5 3 HELIX 4 4 TYR A 64 GLY A 77 1 14 HELIX 5 5 GLY A 93 GLU A 103 1 11 HELIX 6 6 LYS A 105 CYS A 113 1 9 HELIX 7 7 THR B 14 ASN B 27 1 14 HELIX 8 8 CYS B 37 MET B 50 1 14 HELIX 9 9 ASP B 60 LEU B 62 5 3 HELIX 10 10 TYR B 64 GLY B 77 1 14 HELIX 11 11 GLY B 93 GLU B 103 1 11 HELIX 12 12 LYS B 105 LYS B 117 1 13 HELIX 13 13 LYS B 119 PHE B 123 5 5 HELIX 14 14 LEU X -9 GLU X 2 1 12 SHEET 1 A 4 LYS A 55 GLU A 58 0 SHEET 2 A 4 VAL A 29 SER A 33 1 N VAL A 29 O LYS A 55 SHEET 3 A 4 ARG A 83 VAL A 86 -1 O ARG A 83 N PHE A 32 SHEET 4 A 4 THR A 89 GLY A 92 -1 O ILE A 91 N ILE A 84 SHEET 1 B 4 LYS B 55 GLU B 58 0 SHEET 2 B 4 VAL B 29 SER B 33 1 N SER B 33 O VAL B 57 SHEET 3 B 4 ARG B 83 VAL B 86 -1 O PHE B 85 N VAL B 30 SHEET 4 B 4 THR B 89 GLY B 92 -1 O ILE B 91 N ILE B 84 SSBOND 1 CYS A 28 CYS A 113 1555 1555 2.02 SSBOND 2 CYS B 28 CYS B 113 1555 1555 2.05 LINK SG CYS A 37 FE1 FES A1001 1555 1555 2.31 LINK SG2 GSH A 200 FE1 FES A1001 1555 1555 2.28 LINK FE2 FES A1001 SG CYS B 37 1555 1555 2.32 LINK FE2 FES A1001 SG2 GSH B1200 1555 1555 2.28 CISPEP 1 VAL A 81 PRO A 82 0 -6.87 CISPEP 2 VAL B 81 PRO B 82 0 -1.35 SITE 1 AC1 14 CYS A 37 TYR A 39 THR A 80 VAL A 81 SITE 2 AC1 14 GLY A 93 ALA A 94 THR A 95 FES A1001 SITE 3 AC1 14 HOH A1006 HOH A1053 HOH A1057 HOH A1062 SITE 4 AC1 14 SER B 36 SER B 38 SITE 1 AC2 15 SER A 36 SER A 38 FES A1001 LYS B 34 SITE 2 AC2 15 CYS B 37 TYR B 39 GLN B 69 THR B 80 SITE 3 AC2 15 VAL B 81 PRO B 82 GLY B 93 ALA B 94 SITE 4 AC2 15 THR B 95 HOH B1204 HOH B1220 SITE 1 AC3 7 CYS A 37 TYR A 39 GSH A 200 CYS B 37 SITE 2 AC3 7 SER B 38 TYR B 39 GSH B1200 CRYST1 111.754 111.754 51.647 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008948 0.005166 0.000000 0.00000 SCALE2 0.000000 0.010333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019362 0.00000