data_2HVS # _entry.id 2HVS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HVS pdb_00002hvs 10.2210/pdb2hvs/pdb NDB PH0027 ? ? RCSB RCSB038820 ? ? WWPDB D_1000038820 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2HVQ 'Structure of Adenylated full-length T4 RNA Ligase 2' unspecified PDB 2HVR ;Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 3'-deoxyribonucleotide at the nick ; unspecified # _pdbx_database_status.entry_id 2HVS _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-07-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nandakumar, J.' 1 'Lima, C.D.' 2 # _citation.id primary _citation.title 'RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 127 _citation.page_first 71 _citation.page_last 84 _citation.year 2006 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17018278 _citation.pdbx_database_id_DOI 10.1016/j.cell.2006.08.038 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nandakumar, J.' 1 ? primary 'Shuman, S.' 2 ? primary 'Lima, C.D.' 3 ? # _cell.entry_id 2HVS _cell.length_a 83.416 _cell.length_b 106.740 _cell.length_c 124.203 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HVS _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*AP*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*TP*TP*G)-3'" 7440.800 2 ? ? ? ? 2 polymer syn "5'-D(*CP*AP*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC)P*C)-3'" 3637.395 2 ? ? ? ? 3 polymer syn "5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*AP*T)-3'" 3646.405 2 ? ? ? ? 4 polymer man 'T4 RNA Ligase 2' 37714.168 2 ? ? ? ? 5 non-polymer syn '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' 209.240 3 ? ? ? ? 6 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 2 ? ? ? ? 7 water nat water 18.015 98 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DA)(DT)(DT)(DC)(DC)(DG)(DA)(DT)(DA)(DG)(DT)(DG)(DG)(DG)(DG)(DT)(DC)(DG)(DC)(DA) (DA)(DT)(DT)(DG) ; ATTCCGATAGTGGGGTCGCAATTG C,F ? 2 'polydeoxyribonucleotide/polyribonucleotide hybrid' no yes '(DC)(DA)(DA)(DT)(DT)(DG)(DC)(DG)(DA)(DC)(OMC)(DC)' CAATTGCGACCC D,G ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DC)(DT)(DA)(DT)(DC)(DG)(DG)(DA)(DA)(DT)' CACTATCGGAAT E,H ? 4 'polypeptide(L)' no no ;SMFKKYSSLENHYNSKFIEKLYSLGLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSI KAVQDIMETSAVVSYQVFGEFAGPGIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFE ELIKLPNDLDSVVQDYNFTVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKNSKFSEKKKSDK PIKAKVELSEADNKLVGILACYVTLNRVNNVISKIGEIGPKDFGKVMGLTVQDILEETSREGITLTQADNPSLIKKELVK MVQDVLRPAWIELVS ; ;SMFKKYSSLENHYNSKFIEKLYSLGLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSI KAVQDIMETSAVVSYQVFGEFAGPGIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFE ELIKLPNDLDSVVQDYNFTVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKNSKFSEKKKSDK PIKAKVELSEADNKLVGILACYVTLNRVNNVISKIGEIGPKDFGKVMGLTVQDILEETSREGITLTQADNPSLIKKELVK MVQDVLRPAWIELVS ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DT n 1 4 DC n 1 5 DC n 1 6 DG n 1 7 DA n 1 8 DT n 1 9 DA n 1 10 DG n 1 11 DT n 1 12 DG n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DT n 1 17 DC n 1 18 DG n 1 19 DC n 1 20 DA n 1 21 DA n 1 22 DT n 1 23 DT n 1 24 DG n 2 1 DC n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DG n 2 9 DA n 2 10 DC n 2 11 OMC n 2 12 DC n 3 1 DC n 3 2 DA n 3 3 DC n 3 4 DT n 3 5 DA n 3 6 DT n 3 7 DC n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DA n 3 12 DT n 4 1 SER n 4 2 MET n 4 3 PHE n 4 4 LYS n 4 5 LYS n 4 6 TYR n 4 7 SER n 4 8 SER n 4 9 LEU n 4 10 GLU n 4 11 ASN n 4 12 HIS n 4 13 TYR n 4 14 ASN n 4 15 SER n 4 16 LYS n 4 17 PHE n 4 18 ILE n 4 19 GLU n 4 20 LYS n 4 21 LEU n 4 22 TYR n 4 23 SER n 4 24 LEU n 4 25 GLY n 4 26 LEU n 4 27 THR n 4 28 GLY n 4 29 GLY n 4 30 GLU n 4 31 TRP n 4 32 VAL n 4 33 ALA n 4 34 ARG n 4 35 GLU n 4 36 LYS n 4 37 ILE n 4 38 HIS n 4 39 GLY n 4 40 THR n 4 41 ASN n 4 42 PHE n 4 43 SER n 4 44 LEU n 4 45 ILE n 4 46 ILE n 4 47 GLU n 4 48 ARG n 4 49 ASP n 4 50 LYS n 4 51 VAL n 4 52 THR n 4 53 CYS n 4 54 ALA n 4 55 LYS n 4 56 ARG n 4 57 THR n 4 58 GLY n 4 59 PRO n 4 60 ILE n 4 61 LEU n 4 62 PRO n 4 63 ALA n 4 64 GLU n 4 65 ASP n 4 66 PHE n 4 67 PHE n 4 68 GLY n 4 69 TYR n 4 70 GLU n 4 71 ILE n 4 72 ILE n 4 73 LEU n 4 74 LYS n 4 75 ASN n 4 76 TYR n 4 77 ALA n 4 78 ASP n 4 79 SER n 4 80 ILE n 4 81 LYS n 4 82 ALA n 4 83 VAL n 4 84 GLN n 4 85 ASP n 4 86 ILE n 4 87 MET n 4 88 GLU n 4 89 THR n 4 90 SER n 4 91 ALA n 4 92 VAL n 4 93 VAL n 4 94 SER n 4 95 TYR n 4 96 GLN n 4 97 VAL n 4 98 PHE n 4 99 GLY n 4 100 GLU n 4 101 PHE n 4 102 ALA n 4 103 GLY n 4 104 PRO n 4 105 GLY n 4 106 ILE n 4 107 GLN n 4 108 LYS n 4 109 ASN n 4 110 VAL n 4 111 ASP n 4 112 TYR n 4 113 GLY n 4 114 ASP n 4 115 LYS n 4 116 ASP n 4 117 PHE n 4 118 TYR n 4 119 VAL n 4 120 PHE n 4 121 ASP n 4 122 ILE n 4 123 ILE n 4 124 VAL n 4 125 THR n 4 126 THR n 4 127 GLU n 4 128 SER n 4 129 GLY n 4 130 ASP n 4 131 VAL n 4 132 THR n 4 133 TYR n 4 134 VAL n 4 135 ASP n 4 136 ASP n 4 137 TYR n 4 138 MET n 4 139 MET n 4 140 GLU n 4 141 SER n 4 142 PHE n 4 143 CYS n 4 144 ASN n 4 145 THR n 4 146 PHE n 4 147 LYS n 4 148 PHE n 4 149 LYS n 4 150 MET n 4 151 ALA n 4 152 PRO n 4 153 LEU n 4 154 LEU n 4 155 GLY n 4 156 ARG n 4 157 GLY n 4 158 LYS n 4 159 PHE n 4 160 GLU n 4 161 GLU n 4 162 LEU n 4 163 ILE n 4 164 LYS n 4 165 LEU n 4 166 PRO n 4 167 ASN n 4 168 ASP n 4 169 LEU n 4 170 ASP n 4 171 SER n 4 172 VAL n 4 173 VAL n 4 174 GLN n 4 175 ASP n 4 176 TYR n 4 177 ASN n 4 178 PHE n 4 179 THR n 4 180 VAL n 4 181 ASP n 4 182 HIS n 4 183 ALA n 4 184 GLY n 4 185 LEU n 4 186 VAL n 4 187 ASP n 4 188 ALA n 4 189 ASN n 4 190 LYS n 4 191 CYS n 4 192 VAL n 4 193 TRP n 4 194 ASN n 4 195 ALA n 4 196 GLU n 4 197 ALA n 4 198 LYS n 4 199 GLY n 4 200 GLU n 4 201 VAL n 4 202 PHE n 4 203 THR n 4 204 ALA n 4 205 GLU n 4 206 GLY n 4 207 TYR n 4 208 VAL n 4 209 LEU n 4 210 LYS n 4 211 PRO n 4 212 CYS n 4 213 TYR n 4 214 PRO n 4 215 SER n 4 216 TRP n 4 217 LEU n 4 218 ARG n 4 219 ASN n 4 220 GLY n 4 221 ASN n 4 222 ARG n 4 223 VAL n 4 224 ALA n 4 225 ILE n 4 226 LYS n 4 227 CYS n 4 228 LYS n 4 229 ASN n 4 230 SER n 4 231 LYS n 4 232 PHE n 4 233 SER n 4 234 GLU n 4 235 LYS n 4 236 LYS n 4 237 LYS n 4 238 SER n 4 239 ASP n 4 240 LYS n 4 241 PRO n 4 242 ILE n 4 243 LYS n 4 244 ALA n 4 245 LYS n 4 246 VAL n 4 247 GLU n 4 248 LEU n 4 249 SER n 4 250 GLU n 4 251 ALA n 4 252 ASP n 4 253 ASN n 4 254 LYS n 4 255 LEU n 4 256 VAL n 4 257 GLY n 4 258 ILE n 4 259 LEU n 4 260 ALA n 4 261 CYS n 4 262 TYR n 4 263 VAL n 4 264 THR n 4 265 LEU n 4 266 ASN n 4 267 ARG n 4 268 VAL n 4 269 ASN n 4 270 ASN n 4 271 VAL n 4 272 ILE n 4 273 SER n 4 274 LYS n 4 275 ILE n 4 276 GLY n 4 277 GLU n 4 278 ILE n 4 279 GLY n 4 280 PRO n 4 281 LYS n 4 282 ASP n 4 283 PHE n 4 284 GLY n 4 285 LYS n 4 286 VAL n 4 287 MET n 4 288 GLY n 4 289 LEU n 4 290 THR n 4 291 VAL n 4 292 GLN n 4 293 ASP n 4 294 ILE n 4 295 LEU n 4 296 GLU n 4 297 GLU n 4 298 THR n 4 299 SER n 4 300 ARG n 4 301 GLU n 4 302 GLY n 4 303 ILE n 4 304 THR n 4 305 LEU n 4 306 THR n 4 307 GLN n 4 308 ALA n 4 309 ASP n 4 310 ASN n 4 311 PRO n 4 312 SER n 4 313 LEU n 4 314 ILE n 4 315 LYS n 4 316 LYS n 4 317 GLU n 4 318 LEU n 4 319 VAL n 4 320 LYS n 4 321 MET n 4 322 VAL n 4 323 GLN n 4 324 ASP n 4 325 VAL n 4 326 LEU n 4 327 ARG n 4 328 PRO n 4 329 ALA n 4 330 TRP n 4 331 ILE n 4 332 GLU n 4 333 LEU n 4 334 VAL n 4 335 SER n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus 'T4-like viruses' _entity_src_gen.pdbx_gene_src_gene 'Y10A, 24.1' _entity_src_gen.gene_src_species 'Enterobacteria phage T4 sensu lato' _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage T4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-HIS-SMT3-RNL2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP Y10A_BPT4 P32277 4 1 ? ? 2 PDB 2HVS 2HVS 1 ? ? ? 3 PDB 2HVS 2HVS 2 ? ? ? 4 PDB 2HVS 2HVS 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HVS A 2 ? 335 ? P32277 1 ? 334 ? 1 334 2 1 2HVS B 2 ? 335 ? P32277 1 ? 334 ? 1 334 3 2 2HVS C 1 ? 24 ? 2HVS 1 ? 24 ? 1 24 4 3 2HVS D 1 ? 12 ? 2HVS 125 ? 136 ? 125 136 5 4 2HVS E 1 ? 12 ? 2HVS 237 ? 248 ? 237 248 6 2 2HVS F 1 ? 24 ? 2HVS 1 ? 24 ? 1 24 7 3 2HVS G 1 ? 12 ? 2HVS 125 ? 136 ? 125 136 8 4 2HVS H 1 ? 12 ? 2HVS 237 ? 248 ? 237 248 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HVS SER A 1 ? UNP P32277 ? ? 'cloning artifact' 0 1 1 2HVS GLY A 113 ? UNP P32277 CYS 112 'SEE REMARK 999' 112 2 2 2HVS SER B 1 ? UNP P32277 ? ? 'cloning artifact' 0 3 2 2HVS GLY B 113 ? UNP P32277 CYS 112 'SEE REMARK 999' 112 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BTB non-polymer . '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' 'BIS-TRIS BUFFER' 'C8 H19 N O5' 209.240 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OMC 'RNA linking' n "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O8 P' 337.223 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2HVS _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '100 mM Bis-Tris, 22% PEG-4000, 9% PEG-6000, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 Bis-Tris ? ? ? 1 2 1 PEG-4000 ? ? ? 1 3 1 PEG-6000 ? ? ? 1 4 1 HOH ? ? ? 1 5 2 Bis-Tris ? ? ? 1 6 2 PEG-4000 ? ? ? 1 7 2 PEG-6000 ? ? ? 1 8 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-11-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9797 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9797 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 2HVS _reflns.d_resolution_high 2.500 _reflns.d_resolution_low 20.000 _reflns.number_obs 38379 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_netI_over_sigmaI 15.600 _reflns.pdbx_chi_squared 1.057 _reflns.pdbx_redundancy 8.000 _reflns.percent_possible_obs 98.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.number_all 39043 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.403 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.792 _reflns_shell.pdbx_redundancy 3.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3416 _reflns_shell.percent_possible_all 88.90 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HVS _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 19.820 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF 3139794.250 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 98.200 _refine.ls_number_reflns_obs 38335 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.283 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1898 _refine.ls_R_factor_R_free_error 0.006 _refine.B_iso_mean 72.800 _refine.solvent_model_param_bsol 18.049 _refine.solvent_model_param_ksol 0.240 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] -13.900 _refine.aniso_B[2][2] 10.120 _refine.aniso_B[3][3] 3.780 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 39038 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 2HVR' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.occupancy_max ? _refine.occupancy_min ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2HVS _refine_analyze.Luzzati_coordinate_error_obs 0.360 _refine_analyze.Luzzati_sigma_a_obs 0.650 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.430 _refine_analyze.Luzzati_sigma_a_free 0.600 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 5042 _refine_hist.pdbx_number_atoms_nucleic_acid 1960 _refine_hist.pdbx_number_atoms_ligand 88 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 7188 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 19.820 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.007 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.100 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 21.400 ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? 0.890 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 2.070 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 3.460 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 3.010 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 4.570 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.660 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 92.400 _refine_ls_shell.number_reflns_R_work 5649 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.37 _refine_ls_shell.R_factor_R_free 0.373 _refine_ls_shell.percent_reflns_R_free 4.500 _refine_ls_shell.number_reflns_R_free 265 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 5914 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 btb.param btb.top 'X-RAY DIFFRACTION' 5 dna-rna-apc_rep.param dna-rna-apc.top 'X-RAY DIFFRACTION' # _struct.entry_id 2HVS _struct.title ;Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 2'-deoxyribonucleotide at the nick ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HVS _struct_keywords.pdbx_keywords LIGASE/DNA/RNA _struct_keywords.text 'RNA, LIGASE, LYSINE ADENYLATE, T4, PROTEIN DNA-RNA COMPLEX, LIGASE-DNA-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 5 ? L N N 6 ? M N N 5 ? N N N 7 ? O N N 7 ? P N N 7 ? Q N N 7 ? # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 ;Asymmetric unit contains two complexes of T4 RNA Ligase 2 complexed with nicked duplex related by a non-crystallographic pseudo-translation along the x-axis. ; ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN G 14 ? LEU G 24 ? ASN A 13 LEU A 23 1 ? 11 HELX_P HELX_P2 2 TYR G 69 ? TYR G 76 ? TYR A 68 TYR A 75 1 ? 8 HELX_P HELX_P3 3 TYR G 76 ? GLU G 88 ? TYR A 75 GLU A 87 1 ? 13 HELX_P HELX_P4 4 ASP G 135 ? LYS G 147 ? ASP A 134 LYS A 146 1 ? 13 HELX_P HELX_P5 5 PHE G 159 ? ILE G 163 ? PHE A 158 ILE A 162 1 ? 5 HELX_P HELX_P6 6 VAL G 172 ? ASP G 181 ? VAL A 171 ASP A 180 1 ? 10 HELX_P HELX_P7 7 GLY G 184 ? CYS G 191 ? GLY A 183 CYS A 190 1 ? 8 HELX_P HELX_P8 8 ASP G 252 ? ALA G 260 ? ASP A 251 ALA A 259 1 ? 9 HELX_P HELX_P9 9 CYS G 261 ? VAL G 263 ? CYS A 260 VAL A 262 5 ? 3 HELX_P HELX_P10 10 THR G 264 ? LYS G 274 ? THR A 263 LYS A 273 1 ? 11 HELX_P HELX_P11 11 ASP G 282 ? GLU G 301 ? ASP A 281 GLU A 300 1 ? 20 HELX_P HELX_P12 12 ASN G 310 ? ARG G 327 ? ASN A 309 ARG A 326 1 ? 18 HELX_P HELX_P13 13 PRO G 328 ? TRP G 330 ? PRO A 327 TRP A 329 5 ? 3 HELX_P HELX_P14 14 ASN H 14 ? LEU H 24 ? ASN B 13 LEU B 23 1 ? 11 HELX_P HELX_P15 15 TYR H 69 ? TYR H 76 ? TYR B 68 TYR B 75 1 ? 8 HELX_P HELX_P16 16 TYR H 76 ? GLU H 88 ? TYR B 75 GLU B 87 1 ? 13 HELX_P HELX_P17 17 ASP H 135 ? PHE H 146 ? ASP B 134 PHE B 145 1 ? 12 HELX_P HELX_P18 18 LYS H 158 ? ILE H 163 ? LYS B 157 ILE B 162 1 ? 6 HELX_P HELX_P19 19 VAL H 172 ? ALA H 183 ? VAL B 171 ALA B 182 1 ? 12 HELX_P HELX_P20 20 GLY H 184 ? CYS H 191 ? GLY B 183 CYS B 190 1 ? 8 HELX_P HELX_P21 21 ASN H 253 ? CYS H 261 ? ASN B 252 CYS B 260 1 ? 9 HELX_P HELX_P22 22 THR H 264 ? ILE H 275 ? THR B 263 ILE B 274 1 ? 12 HELX_P HELX_P23 23 ASP H 282 ? ARG H 300 ? ASP B 281 ARG B 299 1 ? 19 HELX_P HELX_P24 24 SER H 312 ? ARG H 327 ? SER B 311 ARG B 326 1 ? 16 HELX_P HELX_P25 25 ALA H 329 ? SER H 335 ? ALA B 328 SER B 334 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 10 "O3'" ? ? ? 1_555 B OMC 11 P ? ? D DC 134 D OMC 135 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale2 covale both ? B OMC 11 "O3'" ? ? ? 1_555 B DC 12 P ? ? D OMC 135 D DC 136 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale3 covale both ? J AMP . O3P ? ? ? 1_555 C DC 1 P ? ? E AMP 236 E DC 237 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale4 covale both ? E DC 10 "O3'" ? ? ? 1_555 E OMC 11 P ? ? G DC 134 G OMC 135 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale5 covale both ? E OMC 11 "O3'" ? ? ? 1_555 E DC 12 P ? ? G OMC 135 G DC 136 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale6 covale both ? L AMP . O3P ? ? ? 1_555 F DC 1 P ? ? H AMP 236 H DC 237 1_555 ? ? ? ? ? ? ? 1.593 ? ? hydrog1 hydrog ? ? A DA 1 N6 ? ? ? 1_555 C DT 12 O4 ? ? C DA 1 E DT 248 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog2 hydrog ? ? A DT 2 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 2 E DA 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 2 E DA 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 C DA 10 N1 ? ? C DT 3 E DA 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 C DA 10 N6 ? ? C DT 3 E DA 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 4 N4 ? ? ? 1_555 C DG 9 O6 ? ? C DC 4 E DG 245 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog7 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 8 N2 ? ? C DC 5 E DG 244 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog8 hydrog ? ? A DG 6 N1 ? ? ? 1_555 C DC 7 N3 ? ? C DG 6 E DC 243 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog9 hydrog ? ? A DA 7 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 7 E DT 242 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 7 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 7 E DT 242 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 8 N3 ? ? ? 1_555 C DA 5 N1 ? ? C DT 8 E DA 241 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 8 O4 ? ? ? 1_555 C DA 5 N6 ? ? C DT 8 E DA 241 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 9 N1 ? ? ? 1_555 C DT 4 N3 ? ? C DA 9 E DT 240 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 9 N6 ? ? ? 1_555 C DT 4 O4 ? ? C DA 9 E DT 240 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 10 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 10 E DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 10 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 10 E DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 10 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 10 E DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 11 N3 ? ? ? 1_555 C DA 2 N1 ? ? C DT 11 E DA 238 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 11 O4 ? ? ? 1_555 C DA 2 N6 ? ? C DT 11 E DA 238 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 12 N1 ? ? ? 1_555 C DC 1 N3 ? ? C DG 12 E DC 237 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog21 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 13 D DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 13 D DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 13 D DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B OMC 11 N3 ? ? C DG 14 D OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B OMC 11 O2 ? ? C DG 14 D OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B OMC 11 N4 ? ? C DG 14 D OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 15 D DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 15 D DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 15 D DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 16 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 16 D DA 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 16 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 16 D DA 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 17 D DG 132 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog33 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 18 D DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 18 D DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 18 D DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 19 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 19 D DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 19 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 19 D DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 19 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 19 D DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 22 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 22 D DA 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DT 22 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 22 D DA 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 24 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 24 D DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 24 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 24 D DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 24 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 24 D DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DA 1 N6 ? ? ? 1_555 F DT 12 O2 ? ? F DA 1 H DT 248 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog45 hydrog ? ? D DT 2 N3 ? ? ? 1_555 F DA 11 N1 ? ? F DT 2 H DA 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D DT 2 O4 ? ? ? 1_555 F DA 11 N6 ? ? F DT 2 H DA 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DT 3 N3 ? ? ? 1_555 F DA 10 N1 ? ? F DT 3 H DA 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DT 3 O4 ? ? ? 1_555 F DA 10 N6 ? ? F DT 3 H DA 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D DC 4 N4 ? ? ? 1_555 F DG 9 O6 ? ? F DC 4 H DG 245 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog50 hydrog ? ? D DG 6 N1 ? ? ? 1_555 F DC 7 N3 ? ? F DG 6 H DC 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DG 6 N2 ? ? ? 1_555 F DC 7 O2 ? ? F DG 6 H DC 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D DG 6 O6 ? ? ? 1_555 F DC 7 N4 ? ? F DG 6 H DC 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D DA 7 N1 ? ? ? 1_555 F DT 6 N3 ? ? F DA 7 H DT 242 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D DA 7 N6 ? ? ? 1_555 F DT 6 O4 ? ? F DA 7 H DT 242 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? D DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? F DT 8 H DA 241 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog56 hydrog ? ? D DG 10 N1 ? ? ? 1_555 F DC 3 N3 ? ? F DG 10 H DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? D DG 10 N2 ? ? ? 1_555 F DC 3 O2 ? ? F DG 10 H DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D DG 10 O6 ? ? ? 1_555 F DC 3 N4 ? ? F DG 10 H DC 239 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D DT 11 N3 ? ? ? 1_555 F DA 2 N1 ? ? F DT 11 H DA 238 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D DT 11 O4 ? ? ? 1_555 F DA 2 N6 ? ? F DT 11 H DA 238 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D DG 12 N1 ? ? ? 1_555 F DC 1 N3 ? ? F DG 12 H DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D DG 12 N2 ? ? ? 1_555 F DC 1 O2 ? ? F DG 12 H DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D DG 12 O6 ? ? ? 1_555 F DC 1 N4 ? ? F DG 12 H DC 237 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D DG 13 N1 ? ? ? 1_555 E DC 12 N3 ? ? F DG 13 G DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D DG 13 N2 ? ? ? 1_555 E DC 12 O2 ? ? F DG 13 G DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D DG 13 O6 ? ? ? 1_555 E DC 12 N4 ? ? F DG 13 G DC 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D DG 14 N1 ? ? ? 1_555 E OMC 11 N3 ? ? F DG 14 G OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D DG 14 N2 ? ? ? 1_555 E OMC 11 O2 ? ? F DG 14 G OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? D DG 14 O6 ? ? ? 1_555 E OMC 11 N4 ? ? F DG 14 G OMC 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? D DG 15 N1 ? ? ? 1_555 E DC 10 N3 ? ? F DG 15 G DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? D DG 15 N2 ? ? ? 1_555 E DC 10 O2 ? ? F DG 15 G DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? D DG 15 O6 ? ? ? 1_555 E DC 10 N4 ? ? F DG 15 G DC 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? D DT 16 N3 ? ? ? 1_555 E DA 9 N1 ? ? F DT 16 G DA 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? D DT 16 O4 ? ? ? 1_555 E DA 9 N6 ? ? F DT 16 G DA 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? D DC 17 N3 ? ? ? 1_555 E DG 8 N1 ? ? F DC 17 G DG 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? D DC 17 N4 ? ? ? 1_555 E DG 8 O6 ? ? F DC 17 G DG 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? D DC 17 O2 ? ? ? 1_555 E DG 8 N2 ? ? F DC 17 G DG 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? D DG 18 N1 ? ? ? 1_555 E DC 7 N3 ? ? F DG 18 G DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? D DG 18 N2 ? ? ? 1_555 E DC 7 O2 ? ? F DG 18 G DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? D DG 18 O6 ? ? ? 1_555 E DC 7 N4 ? ? F DG 18 G DC 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? D DC 19 N3 ? ? ? 1_555 E DG 6 N1 ? ? F DC 19 G DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? D DC 19 N4 ? ? ? 1_555 E DG 6 O6 ? ? F DC 19 G DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? D DC 19 O2 ? ? ? 1_555 E DG 6 N2 ? ? F DC 19 G DG 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? D DA 20 N1 ? ? ? 1_555 E DT 5 N3 ? ? F DA 20 G DT 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? D DA 20 N6 ? ? ? 1_555 E DT 5 O4 ? ? F DA 20 G DT 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? D DA 21 N1 ? ? ? 1_555 E DT 4 N3 ? ? F DA 21 G DT 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? D DA 21 N6 ? ? ? 1_555 E DT 4 O4 ? ? F DA 21 G DT 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? D DT 22 N3 ? ? ? 1_555 E DA 3 N1 ? ? F DT 22 G DA 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? D DT 22 O4 ? ? ? 1_555 E DA 3 N6 ? ? F DT 22 G DA 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? D DG 24 N1 ? ? ? 1_555 E DC 1 N3 ? ? F DG 24 G DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? D DG 24 N2 ? ? ? 1_555 E DC 1 O2 ? ? F DG 24 G DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? D DG 24 O6 ? ? ? 1_555 E DC 1 N4 ? ? F DG 24 G DC 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? C ? 6 ? D ? 5 ? E ? 5 ? F ? 5 ? G ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? parallel G 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU G 10 ? ASN G 11 ? GLU A 9 ASN A 10 A 2 ILE G 225 ? LYS G 228 ? ILE A 224 LYS A 227 A 3 GLY G 206 ? PRO G 211 ? GLY A 205 PRO A 210 A 4 GLU G 30 ? GLU G 35 ? GLU A 29 GLU A 34 A 5 LEU G 153 ? LYS G 158 ? LEU A 152 LYS A 157 B 1 GLY G 58 ? PRO G 59 ? GLY A 57 PRO A 58 B 2 VAL G 51 ? LYS G 55 ? VAL A 50 LYS A 54 B 3 THR G 40 ? GLU G 47 ? THR A 39 GLU A 46 B 4 VAL G 92 ? ALA G 102 ? VAL A 91 ALA A 101 B 5 ASP G 116 ? THR G 126 ? ASP A 115 THR A 125 B 6 VAL G 131 ? TYR G 133 ? VAL A 130 TYR A 132 C 1 GLY G 58 ? PRO G 59 ? GLY A 57 PRO A 58 C 2 VAL G 51 ? LYS G 55 ? VAL A 50 LYS A 54 C 3 THR G 40 ? GLU G 47 ? THR A 39 GLU A 46 C 4 VAL G 92 ? ALA G 102 ? VAL A 91 ALA A 101 C 5 ASP G 116 ? THR G 126 ? ASP A 115 THR A 125 C 6 LYS G 149 ? MET G 150 ? LYS A 148 MET A 149 D 1 GLU H 10 ? ASN H 11 ? GLU B 9 ASN B 10 D 2 ILE H 225 ? LYS H 228 ? ILE B 224 LYS B 227 D 3 GLY H 206 ? PRO H 211 ? GLY B 205 PRO B 210 D 4 TRP H 31 ? GLU H 35 ? TRP B 30 GLU B 34 D 5 LEU H 153 ? GLY H 155 ? LEU B 152 GLY B 154 E 1 LYS H 50 ? ALA H 54 ? LYS B 49 ALA B 53 E 2 THR H 40 ? GLU H 47 ? THR B 39 GLU B 46 E 3 VAL H 92 ? ALA H 102 ? VAL B 91 ALA B 101 E 4 ASP H 116 ? THR H 126 ? ASP B 115 THR B 125 E 5 VAL H 131 ? TYR H 133 ? VAL B 130 TYR B 132 F 1 LYS H 50 ? ALA H 54 ? LYS B 49 ALA B 53 F 2 THR H 40 ? GLU H 47 ? THR B 39 GLU B 46 F 3 VAL H 92 ? ALA H 102 ? VAL B 91 ALA B 101 F 4 ASP H 116 ? THR H 126 ? ASP B 115 THR B 125 F 5 LYS H 149 ? MET H 150 ? LYS B 148 MET B 149 G 1 TRP H 216 ? LEU H 217 ? TRP B 215 LEU B 216 G 2 ASN H 221 ? ARG H 222 ? ASN B 220 ARG B 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU G 10 ? N GLU A 9 O LYS G 226 ? O LYS A 225 A 2 3 O ILE G 225 ? O ILE A 224 N LEU G 209 ? N LEU A 208 A 3 4 O LYS G 210 ? O LYS A 209 N VAL G 32 ? N VAL A 31 A 4 5 N TRP G 31 ? N TRP A 30 O GLY G 157 ? O GLY A 156 B 1 2 O GLY G 58 ? O GLY A 57 N LYS G 55 ? N LYS A 54 B 2 3 O THR G 52 ? O THR A 51 N ILE G 45 ? N ILE A 44 B 3 4 N THR G 40 ? N THR A 39 O PHE G 101 ? O PHE A 100 B 4 5 N PHE G 98 ? N PHE A 97 O ASP G 121 ? O ASP A 120 B 5 6 N VAL G 124 ? N VAL A 123 O THR G 132 ? O THR A 131 C 1 2 O GLY G 58 ? O GLY A 57 N LYS G 55 ? N LYS A 54 C 2 3 O THR G 52 ? O THR A 51 N ILE G 45 ? N ILE A 44 C 3 4 N THR G 40 ? N THR A 39 O PHE G 101 ? O PHE A 100 C 4 5 N PHE G 98 ? N PHE A 97 O ASP G 121 ? O ASP A 120 C 5 6 N VAL G 119 ? N VAL A 118 O LYS G 149 ? O LYS A 148 D 1 2 N GLU H 10 ? N GLU B 9 O LYS H 226 ? O LYS B 225 D 2 3 O CYS H 227 ? O CYS B 226 N TYR H 207 ? N TYR B 206 D 3 4 O VAL H 208 ? O VAL B 207 N ARG H 34 ? N ARG B 33 D 4 5 N ALA H 33 ? N ALA B 32 O LEU H 154 ? O LEU B 153 E 1 2 O THR H 52 ? O THR B 51 N ILE H 45 ? N ILE B 44 E 2 3 N ILE H 46 ? N ILE B 45 O TYR H 95 ? O TYR B 94 E 3 4 N GLU H 100 ? N GLU B 99 O TYR H 118 ? O TYR B 117 E 4 5 N VAL H 124 ? N VAL B 123 O THR H 132 ? O THR B 131 F 1 2 O THR H 52 ? O THR B 51 N ILE H 45 ? N ILE B 44 F 2 3 N ILE H 46 ? N ILE B 45 O TYR H 95 ? O TYR B 94 F 3 4 N GLU H 100 ? N GLU B 99 O TYR H 118 ? O TYR B 117 F 4 5 N VAL H 119 ? N VAL B 118 O LYS H 149 ? O LYS B 148 G 1 2 N LEU H 217 ? N LEU B 216 O ASN H 221 ? O ASN B 220 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C BTB 201 ? 6 'BINDING SITE FOR RESIDUE BTB C 201' AC2 Software E AMP 236 ? 15 'BINDING SITE FOR RESIDUE AMP E 236' AC3 Software F BTB 202 ? 3 'BINDING SITE FOR RESIDUE BTB F 202' AC4 Software H AMP 236 ? 11 'BINDING SITE FOR RESIDUE AMP H 236' AC5 Software A BTB 335 ? 5 'BINDING SITE FOR RESIDUE BTB A 335' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DT A 11 ? DT C 11 . ? 1_555 ? 2 AC1 6 DG A 12 ? DG C 12 . ? 1_555 ? 3 AC1 6 DG A 13 ? DG C 13 . ? 1_555 ? 4 AC1 6 DG A 14 ? DG C 14 . ? 1_555 ? 5 AC1 6 DC B 10 ? DC D 134 . ? 1_555 ? 6 AC1 6 OMC B 11 ? OMC D 135 . ? 1_555 ? 7 AC2 15 TYR G 6 ? TYR A 5 . ? 1_555 ? 8 AC2 15 LEU G 9 ? LEU A 8 . ? 1_555 ? 9 AC2 15 GLU G 35 ? GLU A 34 . ? 1_555 ? 10 AC2 15 LYS G 36 ? LYS A 35 . ? 1_555 ? 11 AC2 15 ILE G 37 ? ILE A 36 . ? 1_555 ? 12 AC2 15 ASN G 41 ? ASN A 40 . ? 1_555 ? 13 AC2 15 GLU G 100 ? GLU A 99 . ? 1_555 ? 14 AC2 15 PHE G 120 ? PHE A 119 . ? 1_555 ? 15 AC2 15 ALA G 151 ? ALA A 150 . ? 1_555 ? 16 AC2 15 VAL G 208 ? VAL A 207 . ? 1_555 ? 17 AC2 15 LYS G 210 ? LYS A 209 . ? 1_555 ? 18 AC2 15 LYS G 226 ? LYS A 225 . ? 1_555 ? 19 AC2 15 LYS G 228 ? LYS A 227 . ? 1_555 ? 20 AC2 15 HOH O . ? HOH E 74 . ? 1_555 ? 21 AC2 15 DC C 1 ? DC E 237 . ? 1_555 ? 22 AC3 3 DG D 12 ? DG F 12 . ? 1_555 ? 23 AC3 3 DG D 13 ? DG F 13 . ? 1_555 ? 24 AC3 3 OMC E 11 ? OMC G 135 . ? 1_555 ? 25 AC4 11 TYR H 6 ? TYR B 5 . ? 1_555 ? 26 AC4 11 LEU H 9 ? LEU B 8 . ? 1_555 ? 27 AC4 11 GLU H 35 ? GLU B 34 . ? 1_555 ? 28 AC4 11 LYS H 36 ? LYS B 35 . ? 1_555 ? 29 AC4 11 ILE H 37 ? ILE B 36 . ? 1_555 ? 30 AC4 11 ASN H 41 ? ASN B 40 . ? 1_555 ? 31 AC4 11 GLU H 100 ? GLU B 99 . ? 1_555 ? 32 AC4 11 PHE H 120 ? PHE B 119 . ? 1_555 ? 33 AC4 11 ALA H 151 ? ALA B 150 . ? 1_555 ? 34 AC4 11 LYS H 226 ? LYS B 225 . ? 1_555 ? 35 AC4 11 DC F 1 ? DC H 237 . ? 1_555 ? 36 AC5 5 ASN G 194 ? ASN A 193 . ? 1_555 ? 37 AC5 5 GLU G 196 ? GLU A 195 . ? 1_555 ? 38 AC5 5 LYS G 198 ? LYS A 197 . ? 1_555 ? 39 AC5 5 VAL H 131 ? VAL B 130 . ? 1_455 ? 40 AC5 5 TRP H 216 ? TRP B 215 . ? 1_455 ? # _database_PDB_matrix.entry_id 2HVS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2HVS _atom_sites.fract_transf_matrix[1][1] 0.011988 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009369 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008051 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A C . n A 1 2 DT 2 2 2 DT T C . n A 1 3 DT 3 3 3 DT T C . n A 1 4 DC 4 4 4 DC C C . n A 1 5 DC 5 5 5 DC C C . n A 1 6 DG 6 6 6 DG G C . n A 1 7 DA 7 7 7 DA A C . n A 1 8 DT 8 8 8 DT T C . n A 1 9 DA 9 9 9 DA A C . n A 1 10 DG 10 10 10 DG G C . n A 1 11 DT 11 11 11 DT T C . n A 1 12 DG 12 12 12 DG G C . n A 1 13 DG 13 13 13 DG G C . n A 1 14 DG 14 14 14 DG G C . n A 1 15 DG 15 15 15 DG G C . n A 1 16 DT 16 16 16 DT T C . n A 1 17 DC 17 17 17 DC C C . n A 1 18 DG 18 18 18 DG G C . n A 1 19 DC 19 19 19 DC C C . n A 1 20 DA 20 20 20 DA A C . n A 1 21 DA 21 21 21 DA A C . n A 1 22 DT 22 22 22 DT T C . n A 1 23 DT 23 23 23 DT T C . n A 1 24 DG 24 24 24 DG G C . n B 2 1 DC 1 125 125 DC C D . n B 2 2 DA 2 126 126 DA A D . n B 2 3 DA 3 127 127 DA A D . n B 2 4 DT 4 128 128 DT T D . n B 2 5 DT 5 129 129 DT T D . n B 2 6 DG 6 130 130 DG G D . n B 2 7 DC 7 131 131 DC C D . n B 2 8 DG 8 132 132 DG G D . n B 2 9 DA 9 133 133 DA A D . n B 2 10 DC 10 134 134 DC C D . n B 2 11 OMC 11 135 135 OMC OMC D . n B 2 12 DC 12 136 136 DC C D . n C 3 1 DC 1 237 237 DC C E . n C 3 2 DA 2 238 238 DA A E . n C 3 3 DC 3 239 239 DC C E . n C 3 4 DT 4 240 240 DT T E . n C 3 5 DA 5 241 241 DA A E . n C 3 6 DT 6 242 242 DT T E . n C 3 7 DC 7 243 243 DC C E . n C 3 8 DG 8 244 244 DG G E . n C 3 9 DG 9 245 245 DG G E . n C 3 10 DA 10 246 246 DA A E . n C 3 11 DA 11 247 247 DA A E . n C 3 12 DT 12 248 248 DT T E . n D 1 1 DA 1 1 1 DA A F . n D 1 2 DT 2 2 2 DT T F . n D 1 3 DT 3 3 3 DT T F . n D 1 4 DC 4 4 4 DC C F . n D 1 5 DC 5 5 5 DC C F . n D 1 6 DG 6 6 6 DG G F . n D 1 7 DA 7 7 7 DA A F . n D 1 8 DT 8 8 8 DT T F . n D 1 9 DA 9 9 9 DA A F . n D 1 10 DG 10 10 10 DG G F . n D 1 11 DT 11 11 11 DT T F . n D 1 12 DG 12 12 12 DG G F . n D 1 13 DG 13 13 13 DG G F . n D 1 14 DG 14 14 14 DG G F . n D 1 15 DG 15 15 15 DG G F . n D 1 16 DT 16 16 16 DT T F . n D 1 17 DC 17 17 17 DC C F . n D 1 18 DG 18 18 18 DG G F . n D 1 19 DC 19 19 19 DC C F . n D 1 20 DA 20 20 20 DA A F . n D 1 21 DA 21 21 21 DA A F . n D 1 22 DT 22 22 22 DT T F . n D 1 23 DT 23 23 23 DT T F . n D 1 24 DG 24 24 24 DG G F . n E 2 1 DC 1 125 125 DC C G . n E 2 2 DA 2 126 126 DA A G . n E 2 3 DA 3 127 127 DA A G . n E 2 4 DT 4 128 128 DT T G . n E 2 5 DT 5 129 129 DT T G . n E 2 6 DG 6 130 130 DG G G . n E 2 7 DC 7 131 131 DC C G . n E 2 8 DG 8 132 132 DG G G . n E 2 9 DA 9 133 133 DA A G . n E 2 10 DC 10 134 134 DC C G . n E 2 11 OMC 11 135 135 OMC OMC G . n E 2 12 DC 12 136 136 DC C G . n F 3 1 DC 1 237 237 DC C H . n F 3 2 DA 2 238 238 DA A H . n F 3 3 DC 3 239 239 DC C H . n F 3 4 DT 4 240 240 DT T H . n F 3 5 DA 5 241 241 DA A H . n F 3 6 DT 6 242 242 DT T H . n F 3 7 DC 7 243 243 DC C H . n F 3 8 DG 8 244 244 DG G H . n F 3 9 DG 9 245 245 DG G H . n F 3 10 DA 10 246 246 DA A H . n F 3 11 DA 11 247 247 DA A H . n F 3 12 DT 12 248 248 DT T H . n G 4 1 SER 1 0 0 SER SER A . n G 4 2 MET 2 1 1 MET MET A . n G 4 3 PHE 3 2 2 PHE PHE A . n G 4 4 LYS 4 3 3 LYS LYS A . n G 4 5 LYS 5 4 4 LYS LYS A . n G 4 6 TYR 6 5 5 TYR TYR A . n G 4 7 SER 7 6 6 SER SER A . n G 4 8 SER 8 7 7 SER SER A . n G 4 9 LEU 9 8 8 LEU LEU A . n G 4 10 GLU 10 9 9 GLU GLU A . n G 4 11 ASN 11 10 10 ASN ASN A . n G 4 12 HIS 12 11 11 HIS HIS A . n G 4 13 TYR 13 12 12 TYR TYR A . n G 4 14 ASN 14 13 13 ASN ASN A . n G 4 15 SER 15 14 14 SER SER A . n G 4 16 LYS 16 15 15 LYS LYS A . n G 4 17 PHE 17 16 16 PHE PHE A . n G 4 18 ILE 18 17 17 ILE ILE A . n G 4 19 GLU 19 18 18 GLU GLU A . n G 4 20 LYS 20 19 19 LYS LYS A . n G 4 21 LEU 21 20 20 LEU LEU A . n G 4 22 TYR 22 21 21 TYR TYR A . n G 4 23 SER 23 22 22 SER SER A . n G 4 24 LEU 24 23 23 LEU LEU A . n G 4 25 GLY 25 24 24 GLY GLY A . n G 4 26 LEU 26 25 25 LEU LEU A . n G 4 27 THR 27 26 26 THR THR A . n G 4 28 GLY 28 27 27 GLY GLY A . n G 4 29 GLY 29 28 28 GLY GLY A . n G 4 30 GLU 30 29 29 GLU GLU A . n G 4 31 TRP 31 30 30 TRP TRP A . n G 4 32 VAL 32 31 31 VAL VAL A . n G 4 33 ALA 33 32 32 ALA ALA A . n G 4 34 ARG 34 33 33 ARG ARG A . n G 4 35 GLU 35 34 34 GLU GLU A . n G 4 36 LYS 36 35 35 LYS LYS A . n G 4 37 ILE 37 36 36 ILE ILE A . n G 4 38 HIS 38 37 37 HIS HIS A . n G 4 39 GLY 39 38 38 GLY GLY A . n G 4 40 THR 40 39 39 THR THR A . n G 4 41 ASN 41 40 40 ASN ASN A . n G 4 42 PHE 42 41 41 PHE PHE A . n G 4 43 SER 43 42 42 SER SER A . n G 4 44 LEU 44 43 43 LEU LEU A . n G 4 45 ILE 45 44 44 ILE ILE A . n G 4 46 ILE 46 45 45 ILE ILE A . n G 4 47 GLU 47 46 46 GLU GLU A . n G 4 48 ARG 48 47 47 ARG ARG A . n G 4 49 ASP 49 48 48 ASP ASP A . n G 4 50 LYS 50 49 49 LYS LYS A . n G 4 51 VAL 51 50 50 VAL VAL A . n G 4 52 THR 52 51 51 THR THR A . n G 4 53 CYS 53 52 52 CYS CYS A . n G 4 54 ALA 54 53 53 ALA ALA A . n G 4 55 LYS 55 54 54 LYS LYS A . n G 4 56 ARG 56 55 55 ARG ARG A . n G 4 57 THR 57 56 56 THR THR A . n G 4 58 GLY 58 57 57 GLY GLY A . n G 4 59 PRO 59 58 58 PRO PRO A . n G 4 60 ILE 60 59 59 ILE ILE A . n G 4 61 LEU 61 60 60 LEU LEU A . n G 4 62 PRO 62 61 61 PRO PRO A . n G 4 63 ALA 63 62 62 ALA ALA A . n G 4 64 GLU 64 63 63 GLU GLU A . n G 4 65 ASP 65 64 64 ASP ASP A . n G 4 66 PHE 66 65 65 PHE PHE A . n G 4 67 PHE 67 66 66 PHE PHE A . n G 4 68 GLY 68 67 67 GLY GLY A . n G 4 69 TYR 69 68 68 TYR TYR A . n G 4 70 GLU 70 69 69 GLU GLU A . n G 4 71 ILE 71 70 70 ILE ILE A . n G 4 72 ILE 72 71 71 ILE ILE A . n G 4 73 LEU 73 72 72 LEU LEU A . n G 4 74 LYS 74 73 73 LYS LYS A . n G 4 75 ASN 75 74 74 ASN ASN A . n G 4 76 TYR 76 75 75 TYR TYR A . n G 4 77 ALA 77 76 76 ALA ALA A . n G 4 78 ASP 78 77 77 ASP ASP A . n G 4 79 SER 79 78 78 SER SER A . n G 4 80 ILE 80 79 79 ILE ILE A . n G 4 81 LYS 81 80 80 LYS LYS A . n G 4 82 ALA 82 81 81 ALA ALA A . n G 4 83 VAL 83 82 82 VAL VAL A . n G 4 84 GLN 84 83 83 GLN GLN A . n G 4 85 ASP 85 84 84 ASP ASP A . n G 4 86 ILE 86 85 85 ILE ILE A . n G 4 87 MET 87 86 86 MET MET A . n G 4 88 GLU 88 87 87 GLU GLU A . n G 4 89 THR 89 88 88 THR THR A . n G 4 90 SER 90 89 89 SER SER A . n G 4 91 ALA 91 90 90 ALA ALA A . n G 4 92 VAL 92 91 91 VAL VAL A . n G 4 93 VAL 93 92 92 VAL VAL A . n G 4 94 SER 94 93 93 SER SER A . n G 4 95 TYR 95 94 94 TYR TYR A . n G 4 96 GLN 96 95 95 GLN GLN A . n G 4 97 VAL 97 96 96 VAL VAL A . n G 4 98 PHE 98 97 97 PHE PHE A . n G 4 99 GLY 99 98 98 GLY GLY A . n G 4 100 GLU 100 99 99 GLU GLU A . n G 4 101 PHE 101 100 100 PHE PHE A . n G 4 102 ALA 102 101 101 ALA ALA A . n G 4 103 GLY 103 102 102 GLY GLY A . n G 4 104 PRO 104 103 103 PRO PRO A . n G 4 105 GLY 105 104 104 GLY GLY A . n G 4 106 ILE 106 105 105 ILE ILE A . n G 4 107 GLN 107 106 106 GLN GLN A . n G 4 108 LYS 108 107 107 LYS LYS A . n G 4 109 ASN 109 108 108 ASN ASN A . n G 4 110 VAL 110 109 109 VAL VAL A . n G 4 111 ASP 111 110 110 ASP ASP A . n G 4 112 TYR 112 111 111 TYR TYR A . n G 4 113 GLY 113 112 112 GLY GLY A . n G 4 114 ASP 114 113 113 ASP ASP A . n G 4 115 LYS 115 114 114 LYS LYS A . n G 4 116 ASP 116 115 115 ASP ASP A . n G 4 117 PHE 117 116 116 PHE PHE A . n G 4 118 TYR 118 117 117 TYR TYR A . n G 4 119 VAL 119 118 118 VAL VAL A . n G 4 120 PHE 120 119 119 PHE PHE A . n G 4 121 ASP 121 120 120 ASP ASP A . n G 4 122 ILE 122 121 121 ILE ILE A . n G 4 123 ILE 123 122 122 ILE ILE A . n G 4 124 VAL 124 123 123 VAL VAL A . n G 4 125 THR 125 124 124 THR THR A . n G 4 126 THR 126 125 125 THR THR A . n G 4 127 GLU 127 126 126 GLU GLU A . n G 4 128 SER 128 127 127 SER SER A . n G 4 129 GLY 129 128 128 GLY GLY A . n G 4 130 ASP 130 129 129 ASP ASP A . n G 4 131 VAL 131 130 130 VAL VAL A . n G 4 132 THR 132 131 131 THR THR A . n G 4 133 TYR 133 132 132 TYR TYR A . n G 4 134 VAL 134 133 133 VAL VAL A . n G 4 135 ASP 135 134 134 ASP ASP A . n G 4 136 ASP 136 135 135 ASP ASP A . n G 4 137 TYR 137 136 136 TYR TYR A . n G 4 138 MET 138 137 137 MET MET A . n G 4 139 MET 139 138 138 MET MET A . n G 4 140 GLU 140 139 139 GLU GLU A . n G 4 141 SER 141 140 140 SER SER A . n G 4 142 PHE 142 141 141 PHE PHE A . n G 4 143 CYS 143 142 142 CYS CYS A . n G 4 144 ASN 144 143 143 ASN ASN A . n G 4 145 THR 145 144 144 THR THR A . n G 4 146 PHE 146 145 145 PHE PHE A . n G 4 147 LYS 147 146 146 LYS LYS A . n G 4 148 PHE 148 147 147 PHE PHE A . n G 4 149 LYS 149 148 148 LYS LYS A . n G 4 150 MET 150 149 149 MET MET A . n G 4 151 ALA 151 150 150 ALA ALA A . n G 4 152 PRO 152 151 151 PRO PRO A . n G 4 153 LEU 153 152 152 LEU LEU A . n G 4 154 LEU 154 153 153 LEU LEU A . n G 4 155 GLY 155 154 154 GLY GLY A . n G 4 156 ARG 156 155 155 ARG ARG A . n G 4 157 GLY 157 156 156 GLY GLY A . n G 4 158 LYS 158 157 157 LYS LYS A . n G 4 159 PHE 159 158 158 PHE PHE A . n G 4 160 GLU 160 159 159 GLU GLU A . n G 4 161 GLU 161 160 160 GLU GLU A . n G 4 162 LEU 162 161 161 LEU LEU A . n G 4 163 ILE 163 162 162 ILE ILE A . n G 4 164 LYS 164 163 163 LYS LYS A . n G 4 165 LEU 165 164 164 LEU LEU A . n G 4 166 PRO 166 165 165 PRO PRO A . n G 4 167 ASN 167 166 166 ASN ASN A . n G 4 168 ASP 168 167 167 ASP ASP A . n G 4 169 LEU 169 168 168 LEU LEU A . n G 4 170 ASP 170 169 169 ASP ASP A . n G 4 171 SER 171 170 170 SER SER A . n G 4 172 VAL 172 171 171 VAL VAL A . n G 4 173 VAL 173 172 172 VAL VAL A . n G 4 174 GLN 174 173 173 GLN GLN A . n G 4 175 ASP 175 174 174 ASP ASP A . n G 4 176 TYR 176 175 175 TYR TYR A . n G 4 177 ASN 177 176 176 ASN ASN A . n G 4 178 PHE 178 177 177 PHE PHE A . n G 4 179 THR 179 178 178 THR THR A . n G 4 180 VAL 180 179 179 VAL VAL A . n G 4 181 ASP 181 180 180 ASP ASP A . n G 4 182 HIS 182 181 181 HIS HIS A . n G 4 183 ALA 183 182 182 ALA ALA A . n G 4 184 GLY 184 183 183 GLY GLY A . n G 4 185 LEU 185 184 184 LEU LEU A . n G 4 186 VAL 186 185 185 VAL VAL A . n G 4 187 ASP 187 186 186 ASP ASP A . n G 4 188 ALA 188 187 187 ALA ALA A . n G 4 189 ASN 189 188 188 ASN ASN A . n G 4 190 LYS 190 189 189 LYS LYS A . n G 4 191 CYS 191 190 190 CYS CYS A . n G 4 192 VAL 192 191 191 VAL VAL A . n G 4 193 TRP 193 192 192 TRP TRP A . n G 4 194 ASN 194 193 193 ASN ASN A . n G 4 195 ALA 195 194 194 ALA ALA A . n G 4 196 GLU 196 195 195 GLU GLU A . n G 4 197 ALA 197 196 196 ALA ALA A . n G 4 198 LYS 198 197 197 LYS LYS A . n G 4 199 GLY 199 198 198 GLY GLY A . n G 4 200 GLU 200 199 199 GLU GLU A . n G 4 201 VAL 201 200 200 VAL VAL A . n G 4 202 PHE 202 201 201 PHE PHE A . n G 4 203 THR 203 202 202 THR THR A . n G 4 204 ALA 204 203 203 ALA ALA A . n G 4 205 GLU 205 204 204 GLU GLU A . n G 4 206 GLY 206 205 205 GLY GLY A . n G 4 207 TYR 207 206 206 TYR TYR A . n G 4 208 VAL 208 207 207 VAL VAL A . n G 4 209 LEU 209 208 208 LEU LEU A . n G 4 210 LYS 210 209 209 LYS LYS A . n G 4 211 PRO 211 210 210 PRO PRO A . n G 4 212 CYS 212 211 211 CYS CYS A . n G 4 213 TYR 213 212 212 TYR TYR A . n G 4 214 PRO 214 213 213 PRO PRO A . n G 4 215 SER 215 214 214 SER SER A . n G 4 216 TRP 216 215 215 TRP TRP A . n G 4 217 LEU 217 216 216 LEU LEU A . n G 4 218 ARG 218 217 217 ARG ARG A . n G 4 219 ASN 219 218 218 ASN ASN A . n G 4 220 GLY 220 219 219 GLY GLY A . n G 4 221 ASN 221 220 220 ASN ASN A . n G 4 222 ARG 222 221 221 ARG ARG A . n G 4 223 VAL 223 222 222 VAL VAL A . n G 4 224 ALA 224 223 223 ALA ALA A . n G 4 225 ILE 225 224 224 ILE ILE A . n G 4 226 LYS 226 225 225 LYS LYS A . n G 4 227 CYS 227 226 226 CYS CYS A . n G 4 228 LYS 228 227 227 LYS LYS A . n G 4 229 ASN 229 228 228 ASN ASN A . n G 4 230 SER 230 229 229 SER SER A . n G 4 231 LYS 231 230 230 LYS LYS A . n G 4 232 PHE 232 231 231 PHE PHE A . n G 4 233 SER 233 232 ? ? ? A . n G 4 234 GLU 234 233 ? ? ? A . n G 4 235 LYS 235 234 ? ? ? A . n G 4 236 LYS 236 235 ? ? ? A . n G 4 237 LYS 237 236 ? ? ? A . n G 4 238 SER 238 237 ? ? ? A . n G 4 239 ASP 239 238 ? ? ? A . n G 4 240 LYS 240 239 ? ? ? A . n G 4 241 PRO 241 240 ? ? ? A . n G 4 242 ILE 242 241 ? ? ? A . n G 4 243 LYS 243 242 ? ? ? A . n G 4 244 ALA 244 243 ? ? ? A . n G 4 245 LYS 245 244 ? ? ? A . n G 4 246 VAL 246 245 ? ? ? A . n G 4 247 GLU 247 246 246 GLU GLU A . n G 4 248 LEU 248 247 247 LEU LEU A . n G 4 249 SER 249 248 248 SER SER A . n G 4 250 GLU 250 249 249 GLU GLU A . n G 4 251 ALA 251 250 250 ALA ALA A . n G 4 252 ASP 252 251 251 ASP ASP A . n G 4 253 ASN 253 252 252 ASN ASN A . n G 4 254 LYS 254 253 253 LYS LYS A . n G 4 255 LEU 255 254 254 LEU LEU A . n G 4 256 VAL 256 255 255 VAL VAL A . n G 4 257 GLY 257 256 256 GLY GLY A . n G 4 258 ILE 258 257 257 ILE ILE A . n G 4 259 LEU 259 258 258 LEU LEU A . n G 4 260 ALA 260 259 259 ALA ALA A . n G 4 261 CYS 261 260 260 CYS CYS A . n G 4 262 TYR 262 261 261 TYR TYR A . n G 4 263 VAL 263 262 262 VAL VAL A . n G 4 264 THR 264 263 263 THR THR A . n G 4 265 LEU 265 264 264 LEU LEU A . n G 4 266 ASN 266 265 265 ASN ASN A . n G 4 267 ARG 267 266 266 ARG ARG A . n G 4 268 VAL 268 267 267 VAL VAL A . n G 4 269 ASN 269 268 268 ASN ASN A . n G 4 270 ASN 270 269 269 ASN ASN A . n G 4 271 VAL 271 270 270 VAL VAL A . n G 4 272 ILE 272 271 271 ILE ILE A . n G 4 273 SER 273 272 272 SER SER A . n G 4 274 LYS 274 273 273 LYS LYS A . n G 4 275 ILE 275 274 274 ILE ILE A . n G 4 276 GLY 276 275 275 GLY GLY A . n G 4 277 GLU 277 276 276 GLU GLU A . n G 4 278 ILE 278 277 277 ILE ILE A . n G 4 279 GLY 279 278 278 GLY GLY A . n G 4 280 PRO 280 279 279 PRO PRO A . n G 4 281 LYS 281 280 280 LYS LYS A . n G 4 282 ASP 282 281 281 ASP ASP A . n G 4 283 PHE 283 282 282 PHE PHE A . n G 4 284 GLY 284 283 283 GLY GLY A . n G 4 285 LYS 285 284 284 LYS LYS A . n G 4 286 VAL 286 285 285 VAL VAL A . n G 4 287 MET 287 286 286 MET MET A . n G 4 288 GLY 288 287 287 GLY GLY A . n G 4 289 LEU 289 288 288 LEU LEU A . n G 4 290 THR 290 289 289 THR THR A . n G 4 291 VAL 291 290 290 VAL VAL A . n G 4 292 GLN 292 291 291 GLN GLN A . n G 4 293 ASP 293 292 292 ASP ASP A . n G 4 294 ILE 294 293 293 ILE ILE A . n G 4 295 LEU 295 294 294 LEU LEU A . n G 4 296 GLU 296 295 295 GLU GLU A . n G 4 297 GLU 297 296 296 GLU GLU A . n G 4 298 THR 298 297 297 THR THR A . n G 4 299 SER 299 298 298 SER SER A . n G 4 300 ARG 300 299 299 ARG ARG A . n G 4 301 GLU 301 300 300 GLU GLU A . n G 4 302 GLY 302 301 301 GLY GLY A . n G 4 303 ILE 303 302 302 ILE ILE A . n G 4 304 THR 304 303 303 THR THR A . n G 4 305 LEU 305 304 304 LEU LEU A . n G 4 306 THR 306 305 305 THR THR A . n G 4 307 GLN 307 306 306 GLN GLN A . n G 4 308 ALA 308 307 307 ALA ALA A . n G 4 309 ASP 309 308 308 ASP ASP A . n G 4 310 ASN 310 309 309 ASN ASN A . n G 4 311 PRO 311 310 310 PRO PRO A . n G 4 312 SER 312 311 311 SER SER A . n G 4 313 LEU 313 312 312 LEU LEU A . n G 4 314 ILE 314 313 313 ILE ILE A . n G 4 315 LYS 315 314 314 LYS LYS A . n G 4 316 LYS 316 315 315 LYS LYS A . n G 4 317 GLU 317 316 316 GLU GLU A . n G 4 318 LEU 318 317 317 LEU LEU A . n G 4 319 VAL 319 318 318 VAL VAL A . n G 4 320 LYS 320 319 319 LYS LYS A . n G 4 321 MET 321 320 320 MET MET A . n G 4 322 VAL 322 321 321 VAL VAL A . n G 4 323 GLN 323 322 322 GLN GLN A . n G 4 324 ASP 324 323 323 ASP ASP A . n G 4 325 VAL 325 324 324 VAL VAL A . n G 4 326 LEU 326 325 325 LEU LEU A . n G 4 327 ARG 327 326 326 ARG ARG A . n G 4 328 PRO 328 327 327 PRO PRO A . n G 4 329 ALA 329 328 328 ALA ALA A . n G 4 330 TRP 330 329 329 TRP TRP A . n G 4 331 ILE 331 330 330 ILE ILE A . n G 4 332 GLU 332 331 331 GLU GLU A . n G 4 333 LEU 333 332 332 LEU LEU A . n G 4 334 VAL 334 333 ? ? ? A . n G 4 335 SER 335 334 ? ? ? A . n H 4 1 SER 1 0 0 SER SER B . n H 4 2 MET 2 1 1 MET MET B . n H 4 3 PHE 3 2 2 PHE PHE B . n H 4 4 LYS 4 3 3 LYS LYS B . n H 4 5 LYS 5 4 4 LYS LYS B . n H 4 6 TYR 6 5 5 TYR TYR B . n H 4 7 SER 7 6 6 SER SER B . n H 4 8 SER 8 7 7 SER SER B . n H 4 9 LEU 9 8 8 LEU LEU B . n H 4 10 GLU 10 9 9 GLU GLU B . n H 4 11 ASN 11 10 10 ASN ASN B . n H 4 12 HIS 12 11 11 HIS HIS B . n H 4 13 TYR 13 12 12 TYR TYR B . n H 4 14 ASN 14 13 13 ASN ASN B . n H 4 15 SER 15 14 14 SER SER B . n H 4 16 LYS 16 15 15 LYS LYS B . n H 4 17 PHE 17 16 16 PHE PHE B . n H 4 18 ILE 18 17 17 ILE ILE B . n H 4 19 GLU 19 18 18 GLU GLU B . n H 4 20 LYS 20 19 19 LYS LYS B . n H 4 21 LEU 21 20 20 LEU LEU B . n H 4 22 TYR 22 21 21 TYR TYR B . n H 4 23 SER 23 22 22 SER SER B . n H 4 24 LEU 24 23 23 LEU LEU B . n H 4 25 GLY 25 24 24 GLY GLY B . n H 4 26 LEU 26 25 25 LEU LEU B . n H 4 27 THR 27 26 26 THR THR B . n H 4 28 GLY 28 27 27 GLY GLY B . n H 4 29 GLY 29 28 28 GLY GLY B . n H 4 30 GLU 30 29 29 GLU GLU B . n H 4 31 TRP 31 30 30 TRP TRP B . n H 4 32 VAL 32 31 31 VAL VAL B . n H 4 33 ALA 33 32 32 ALA ALA B . n H 4 34 ARG 34 33 33 ARG ARG B . n H 4 35 GLU 35 34 34 GLU GLU B . n H 4 36 LYS 36 35 35 LYS LYS B . n H 4 37 ILE 37 36 36 ILE ILE B . n H 4 38 HIS 38 37 37 HIS HIS B . n H 4 39 GLY 39 38 38 GLY GLY B . n H 4 40 THR 40 39 39 THR THR B . n H 4 41 ASN 41 40 40 ASN ASN B . n H 4 42 PHE 42 41 41 PHE PHE B . n H 4 43 SER 43 42 42 SER SER B . n H 4 44 LEU 44 43 43 LEU LEU B . n H 4 45 ILE 45 44 44 ILE ILE B . n H 4 46 ILE 46 45 45 ILE ILE B . n H 4 47 GLU 47 46 46 GLU GLU B . n H 4 48 ARG 48 47 47 ARG ARG B . n H 4 49 ASP 49 48 48 ASP ASP B . n H 4 50 LYS 50 49 49 LYS LYS B . n H 4 51 VAL 51 50 50 VAL VAL B . n H 4 52 THR 52 51 51 THR THR B . n H 4 53 CYS 53 52 52 CYS CYS B . n H 4 54 ALA 54 53 53 ALA ALA B . n H 4 55 LYS 55 54 54 LYS LYS B . n H 4 56 ARG 56 55 55 ARG ARG B . n H 4 57 THR 57 56 56 THR THR B . n H 4 58 GLY 58 57 57 GLY GLY B . n H 4 59 PRO 59 58 58 PRO PRO B . n H 4 60 ILE 60 59 59 ILE ILE B . n H 4 61 LEU 61 60 60 LEU LEU B . n H 4 62 PRO 62 61 61 PRO PRO B . n H 4 63 ALA 63 62 62 ALA ALA B . n H 4 64 GLU 64 63 63 GLU GLU B . n H 4 65 ASP 65 64 64 ASP ASP B . n H 4 66 PHE 66 65 65 PHE PHE B . n H 4 67 PHE 67 66 66 PHE PHE B . n H 4 68 GLY 68 67 67 GLY GLY B . n H 4 69 TYR 69 68 68 TYR TYR B . n H 4 70 GLU 70 69 69 GLU GLU B . n H 4 71 ILE 71 70 70 ILE ILE B . n H 4 72 ILE 72 71 71 ILE ILE B . n H 4 73 LEU 73 72 72 LEU LEU B . n H 4 74 LYS 74 73 73 LYS LYS B . n H 4 75 ASN 75 74 74 ASN ASN B . n H 4 76 TYR 76 75 75 TYR TYR B . n H 4 77 ALA 77 76 76 ALA ALA B . n H 4 78 ASP 78 77 77 ASP ASP B . n H 4 79 SER 79 78 78 SER SER B . n H 4 80 ILE 80 79 79 ILE ILE B . n H 4 81 LYS 81 80 80 LYS LYS B . n H 4 82 ALA 82 81 81 ALA ALA B . n H 4 83 VAL 83 82 82 VAL VAL B . n H 4 84 GLN 84 83 83 GLN GLN B . n H 4 85 ASP 85 84 84 ASP ASP B . n H 4 86 ILE 86 85 85 ILE ILE B . n H 4 87 MET 87 86 86 MET MET B . n H 4 88 GLU 88 87 87 GLU GLU B . n H 4 89 THR 89 88 88 THR THR B . n H 4 90 SER 90 89 89 SER SER B . n H 4 91 ALA 91 90 90 ALA ALA B . n H 4 92 VAL 92 91 91 VAL VAL B . n H 4 93 VAL 93 92 92 VAL VAL B . n H 4 94 SER 94 93 93 SER SER B . n H 4 95 TYR 95 94 94 TYR TYR B . n H 4 96 GLN 96 95 95 GLN GLN B . n H 4 97 VAL 97 96 96 VAL VAL B . n H 4 98 PHE 98 97 97 PHE PHE B . n H 4 99 GLY 99 98 98 GLY GLY B . n H 4 100 GLU 100 99 99 GLU GLU B . n H 4 101 PHE 101 100 100 PHE PHE B . n H 4 102 ALA 102 101 101 ALA ALA B . n H 4 103 GLY 103 102 102 GLY GLY B . n H 4 104 PRO 104 103 103 PRO PRO B . n H 4 105 GLY 105 104 104 GLY GLY B . n H 4 106 ILE 106 105 105 ILE ILE B . n H 4 107 GLN 107 106 106 GLN GLN B . n H 4 108 LYS 108 107 107 LYS LYS B . n H 4 109 ASN 109 108 108 ASN ASN B . n H 4 110 VAL 110 109 109 VAL VAL B . n H 4 111 ASP 111 110 110 ASP ASP B . n H 4 112 TYR 112 111 111 TYR TYR B . n H 4 113 GLY 113 112 112 GLY GLY B . n H 4 114 ASP 114 113 113 ASP ASP B . n H 4 115 LYS 115 114 114 LYS LYS B . n H 4 116 ASP 116 115 115 ASP ASP B . n H 4 117 PHE 117 116 116 PHE PHE B . n H 4 118 TYR 118 117 117 TYR TYR B . n H 4 119 VAL 119 118 118 VAL VAL B . n H 4 120 PHE 120 119 119 PHE PHE B . n H 4 121 ASP 121 120 120 ASP ASP B . n H 4 122 ILE 122 121 121 ILE ILE B . n H 4 123 ILE 123 122 122 ILE ILE B . n H 4 124 VAL 124 123 123 VAL VAL B . n H 4 125 THR 125 124 124 THR THR B . n H 4 126 THR 126 125 125 THR THR B . n H 4 127 GLU 127 126 126 GLU GLU B . n H 4 128 SER 128 127 127 SER SER B . n H 4 129 GLY 129 128 128 GLY GLY B . n H 4 130 ASP 130 129 129 ASP ASP B . n H 4 131 VAL 131 130 130 VAL VAL B . n H 4 132 THR 132 131 131 THR THR B . n H 4 133 TYR 133 132 132 TYR TYR B . n H 4 134 VAL 134 133 133 VAL VAL B . n H 4 135 ASP 135 134 134 ASP ASP B . n H 4 136 ASP 136 135 135 ASP ASP B . n H 4 137 TYR 137 136 136 TYR TYR B . n H 4 138 MET 138 137 137 MET MET B . n H 4 139 MET 139 138 138 MET MET B . n H 4 140 GLU 140 139 139 GLU GLU B . n H 4 141 SER 141 140 140 SER SER B . n H 4 142 PHE 142 141 141 PHE PHE B . n H 4 143 CYS 143 142 142 CYS CYS B . n H 4 144 ASN 144 143 143 ASN ASN B . n H 4 145 THR 145 144 144 THR THR B . n H 4 146 PHE 146 145 145 PHE PHE B . n H 4 147 LYS 147 146 146 LYS LYS B . n H 4 148 PHE 148 147 147 PHE PHE B . n H 4 149 LYS 149 148 148 LYS LYS B . n H 4 150 MET 150 149 149 MET MET B . n H 4 151 ALA 151 150 150 ALA ALA B . n H 4 152 PRO 152 151 151 PRO PRO B . n H 4 153 LEU 153 152 152 LEU LEU B . n H 4 154 LEU 154 153 153 LEU LEU B . n H 4 155 GLY 155 154 154 GLY GLY B . n H 4 156 ARG 156 155 155 ARG ARG B . n H 4 157 GLY 157 156 156 GLY GLY B . n H 4 158 LYS 158 157 157 LYS LYS B . n H 4 159 PHE 159 158 158 PHE PHE B . n H 4 160 GLU 160 159 159 GLU GLU B . n H 4 161 GLU 161 160 160 GLU GLU B . n H 4 162 LEU 162 161 161 LEU LEU B . n H 4 163 ILE 163 162 162 ILE ILE B . n H 4 164 LYS 164 163 163 LYS LYS B . n H 4 165 LEU 165 164 164 LEU LEU B . n H 4 166 PRO 166 165 165 PRO PRO B . n H 4 167 ASN 167 166 166 ASN ASN B . n H 4 168 ASP 168 167 167 ASP ASP B . n H 4 169 LEU 169 168 168 LEU LEU B . n H 4 170 ASP 170 169 169 ASP ASP B . n H 4 171 SER 171 170 170 SER SER B . n H 4 172 VAL 172 171 171 VAL VAL B . n H 4 173 VAL 173 172 172 VAL VAL B . n H 4 174 GLN 174 173 173 GLN GLN B . n H 4 175 ASP 175 174 174 ASP ASP B . n H 4 176 TYR 176 175 175 TYR TYR B . n H 4 177 ASN 177 176 176 ASN ASN B . n H 4 178 PHE 178 177 177 PHE PHE B . n H 4 179 THR 179 178 178 THR THR B . n H 4 180 VAL 180 179 179 VAL VAL B . n H 4 181 ASP 181 180 180 ASP ASP B . n H 4 182 HIS 182 181 181 HIS HIS B . n H 4 183 ALA 183 182 182 ALA ALA B . n H 4 184 GLY 184 183 183 GLY GLY B . n H 4 185 LEU 185 184 184 LEU LEU B . n H 4 186 VAL 186 185 185 VAL VAL B . n H 4 187 ASP 187 186 186 ASP ASP B . n H 4 188 ALA 188 187 187 ALA ALA B . n H 4 189 ASN 189 188 188 ASN ASN B . n H 4 190 LYS 190 189 189 LYS LYS B . n H 4 191 CYS 191 190 190 CYS CYS B . n H 4 192 VAL 192 191 191 VAL VAL B . n H 4 193 TRP 193 192 192 TRP TRP B . n H 4 194 ASN 194 193 193 ASN ASN B . n H 4 195 ALA 195 194 194 ALA ALA B . n H 4 196 GLU 196 195 195 GLU GLU B . n H 4 197 ALA 197 196 196 ALA ALA B . n H 4 198 LYS 198 197 197 LYS LYS B . n H 4 199 GLY 199 198 198 GLY GLY B . n H 4 200 GLU 200 199 199 GLU GLU B . n H 4 201 VAL 201 200 200 VAL VAL B . n H 4 202 PHE 202 201 201 PHE PHE B . n H 4 203 THR 203 202 202 THR THR B . n H 4 204 ALA 204 203 203 ALA ALA B . n H 4 205 GLU 205 204 204 GLU GLU B . n H 4 206 GLY 206 205 205 GLY GLY B . n H 4 207 TYR 207 206 206 TYR TYR B . n H 4 208 VAL 208 207 207 VAL VAL B . n H 4 209 LEU 209 208 208 LEU LEU B . n H 4 210 LYS 210 209 209 LYS LYS B . n H 4 211 PRO 211 210 210 PRO PRO B . n H 4 212 CYS 212 211 211 CYS CYS B . n H 4 213 TYR 213 212 212 TYR TYR B . n H 4 214 PRO 214 213 213 PRO PRO B . n H 4 215 SER 215 214 214 SER SER B . n H 4 216 TRP 216 215 215 TRP TRP B . n H 4 217 LEU 217 216 216 LEU LEU B . n H 4 218 ARG 218 217 217 ARG ARG B . n H 4 219 ASN 219 218 218 ASN ASN B . n H 4 220 GLY 220 219 219 GLY GLY B . n H 4 221 ASN 221 220 220 ASN ASN B . n H 4 222 ARG 222 221 221 ARG ARG B . n H 4 223 VAL 223 222 222 VAL VAL B . n H 4 224 ALA 224 223 223 ALA ALA B . n H 4 225 ILE 225 224 224 ILE ILE B . n H 4 226 LYS 226 225 225 LYS LYS B . n H 4 227 CYS 227 226 226 CYS CYS B . n H 4 228 LYS 228 227 227 LYS LYS B . n H 4 229 ASN 229 228 228 ASN ASN B . n H 4 230 SER 230 229 229 SER SER B . n H 4 231 LYS 231 230 230 LYS LYS B . n H 4 232 PHE 232 231 ? ? ? B . n H 4 233 SER 233 232 ? ? ? B . n H 4 234 GLU 234 233 ? ? ? B . n H 4 235 LYS 235 234 ? ? ? B . n H 4 236 LYS 236 235 ? ? ? B . n H 4 237 LYS 237 236 ? ? ? B . n H 4 238 SER 238 237 ? ? ? B . n H 4 239 ASP 239 238 ? ? ? B . n H 4 240 LYS 240 239 ? ? ? B . n H 4 241 PRO 241 240 ? ? ? B . n H 4 242 ILE 242 241 ? ? ? B . n H 4 243 LYS 243 242 ? ? ? B . n H 4 244 ALA 244 243 ? ? ? B . n H 4 245 LYS 245 244 ? ? ? B . n H 4 246 VAL 246 245 ? ? ? B . n H 4 247 GLU 247 246 ? ? ? B . n H 4 248 LEU 248 247 247 LEU LEU B . n H 4 249 SER 249 248 248 SER SER B . n H 4 250 GLU 250 249 249 GLU GLU B . n H 4 251 ALA 251 250 250 ALA ALA B . n H 4 252 ASP 252 251 251 ASP ASP B . n H 4 253 ASN 253 252 252 ASN ASN B . n H 4 254 LYS 254 253 253 LYS LYS B . n H 4 255 LEU 255 254 254 LEU LEU B . n H 4 256 VAL 256 255 255 VAL VAL B . n H 4 257 GLY 257 256 256 GLY GLY B . n H 4 258 ILE 258 257 257 ILE ILE B . n H 4 259 LEU 259 258 258 LEU LEU B . n H 4 260 ALA 260 259 259 ALA ALA B . n H 4 261 CYS 261 260 260 CYS CYS B . n H 4 262 TYR 262 261 261 TYR TYR B . n H 4 263 VAL 263 262 262 VAL VAL B . n H 4 264 THR 264 263 263 THR THR B . n H 4 265 LEU 265 264 264 LEU LEU B . n H 4 266 ASN 266 265 265 ASN ASN B . n H 4 267 ARG 267 266 266 ARG ARG B . n H 4 268 VAL 268 267 267 VAL VAL B . n H 4 269 ASN 269 268 268 ASN ASN B . n H 4 270 ASN 270 269 269 ASN ASN B . n H 4 271 VAL 271 270 270 VAL VAL B . n H 4 272 ILE 272 271 271 ILE ILE B . n H 4 273 SER 273 272 272 SER SER B . n H 4 274 LYS 274 273 273 LYS LYS B . n H 4 275 ILE 275 274 274 ILE ILE B . n H 4 276 GLY 276 275 275 GLY GLY B . n H 4 277 GLU 277 276 276 GLU GLU B . n H 4 278 ILE 278 277 277 ILE ILE B . n H 4 279 GLY 279 278 278 GLY GLY B . n H 4 280 PRO 280 279 279 PRO PRO B . n H 4 281 LYS 281 280 280 LYS LYS B . n H 4 282 ASP 282 281 281 ASP ASP B . n H 4 283 PHE 283 282 282 PHE PHE B . n H 4 284 GLY 284 283 283 GLY GLY B . n H 4 285 LYS 285 284 284 LYS LYS B . n H 4 286 VAL 286 285 285 VAL VAL B . n H 4 287 MET 287 286 286 MET MET B . n H 4 288 GLY 288 287 287 GLY GLY B . n H 4 289 LEU 289 288 288 LEU LEU B . n H 4 290 THR 290 289 289 THR THR B . n H 4 291 VAL 291 290 290 VAL VAL B . n H 4 292 GLN 292 291 291 GLN GLN B . n H 4 293 ASP 293 292 292 ASP ASP B . n H 4 294 ILE 294 293 293 ILE ILE B . n H 4 295 LEU 295 294 294 LEU LEU B . n H 4 296 GLU 296 295 295 GLU GLU B . n H 4 297 GLU 297 296 296 GLU GLU B . n H 4 298 THR 298 297 297 THR THR B . n H 4 299 SER 299 298 298 SER SER B . n H 4 300 ARG 300 299 299 ARG ARG B . n H 4 301 GLU 301 300 300 GLU GLU B . n H 4 302 GLY 302 301 301 GLY GLY B . n H 4 303 ILE 303 302 302 ILE ILE B . n H 4 304 THR 304 303 303 THR THR B . n H 4 305 LEU 305 304 304 LEU LEU B . n H 4 306 THR 306 305 305 THR THR B . n H 4 307 GLN 307 306 306 GLN GLN B . n H 4 308 ALA 308 307 307 ALA ALA B . n H 4 309 ASP 309 308 308 ASP ASP B . n H 4 310 ASN 310 309 309 ASN ASN B . n H 4 311 PRO 311 310 310 PRO PRO B . n H 4 312 SER 312 311 311 SER SER B . n H 4 313 LEU 313 312 312 LEU LEU B . n H 4 314 ILE 314 313 313 ILE ILE B . n H 4 315 LYS 315 314 314 LYS LYS B . n H 4 316 LYS 316 315 315 LYS LYS B . n H 4 317 GLU 317 316 316 GLU GLU B . n H 4 318 LEU 318 317 317 LEU LEU B . n H 4 319 VAL 319 318 318 VAL VAL B . n H 4 320 LYS 320 319 319 LYS LYS B . n H 4 321 MET 321 320 320 MET MET B . n H 4 322 VAL 322 321 321 VAL VAL B . n H 4 323 GLN 323 322 322 GLN GLN B . n H 4 324 ASP 324 323 323 ASP ASP B . n H 4 325 VAL 325 324 324 VAL VAL B . n H 4 326 LEU 326 325 325 LEU LEU B . n H 4 327 ARG 327 326 326 ARG ARG B . n H 4 328 PRO 328 327 327 PRO PRO B . n H 4 329 ALA 329 328 328 ALA ALA B . n H 4 330 TRP 330 329 329 TRP TRP B . n H 4 331 ILE 331 330 330 ILE ILE B . n H 4 332 GLU 332 331 331 GLU GLU B . n H 4 333 LEU 333 332 332 LEU LEU B . n H 4 334 VAL 334 333 333 VAL VAL B . n H 4 335 SER 335 334 334 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 BTB 1 201 201 BTB BTB C . J 6 AMP 1 236 236 AMP A E . K 5 BTB 1 202 202 BTB BTB F . L 6 AMP 1 236 236 AMP A H . M 5 BTB 1 335 203 BTB BTB A . N 7 HOH 1 61 61 HOH HOH C . O 7 HOH 1 74 74 HOH HOH E . P 7 HOH 1 336 1 HOH HOH A . P 7 HOH 2 337 2 HOH HOH A . P 7 HOH 3 338 4 HOH HOH A . P 7 HOH 4 339 8 HOH HOH A . P 7 HOH 5 340 9 HOH HOH A . P 7 HOH 6 341 11 HOH HOH A . P 7 HOH 7 342 12 HOH HOH A . P 7 HOH 8 343 16 HOH HOH A . P 7 HOH 9 344 17 HOH HOH A . P 7 HOH 10 345 18 HOH HOH A . P 7 HOH 11 346 19 HOH HOH A . P 7 HOH 12 347 20 HOH HOH A . P 7 HOH 13 348 21 HOH HOH A . P 7 HOH 14 349 24 HOH HOH A . P 7 HOH 15 350 26 HOH HOH A . P 7 HOH 16 351 35 HOH HOH A . P 7 HOH 17 352 37 HOH HOH A . P 7 HOH 18 353 38 HOH HOH A . P 7 HOH 19 354 41 HOH HOH A . P 7 HOH 20 355 42 HOH HOH A . P 7 HOH 21 356 46 HOH HOH A . P 7 HOH 22 357 50 HOH HOH A . P 7 HOH 23 358 51 HOH HOH A . P 7 HOH 24 359 52 HOH HOH A . P 7 HOH 25 360 55 HOH HOH A . P 7 HOH 26 361 56 HOH HOH A . P 7 HOH 27 362 57 HOH HOH A . P 7 HOH 28 363 58 HOH HOH A . P 7 HOH 29 364 59 HOH HOH A . P 7 HOH 30 365 60 HOH HOH A . P 7 HOH 31 366 62 HOH HOH A . P 7 HOH 32 367 63 HOH HOH A . P 7 HOH 33 368 64 HOH HOH A . P 7 HOH 34 369 66 HOH HOH A . P 7 HOH 35 370 67 HOH HOH A . P 7 HOH 36 371 68 HOH HOH A . P 7 HOH 37 372 69 HOH HOH A . P 7 HOH 38 373 70 HOH HOH A . P 7 HOH 39 374 83 HOH HOH A . P 7 HOH 40 375 87 HOH HOH A . P 7 HOH 41 376 88 HOH HOH A . P 7 HOH 42 377 89 HOH HOH A . P 7 HOH 43 378 90 HOH HOH A . P 7 HOH 44 379 91 HOH HOH A . P 7 HOH 45 380 92 HOH HOH A . P 7 HOH 46 381 93 HOH HOH A . P 7 HOH 47 382 94 HOH HOH A . P 7 HOH 48 383 95 HOH HOH A . P 7 HOH 49 384 96 HOH HOH A . P 7 HOH 50 385 97 HOH HOH A . P 7 HOH 51 386 98 HOH HOH A . P 7 HOH 52 387 99 HOH HOH A . P 7 HOH 53 388 100 HOH HOH A . P 7 HOH 54 389 101 HOH HOH A . P 7 HOH 55 390 102 HOH HOH A . P 7 HOH 56 391 106 HOH HOH A . P 7 HOH 57 392 107 HOH HOH A . P 7 HOH 58 393 108 HOH HOH A . P 7 HOH 59 394 109 HOH HOH A . Q 7 HOH 1 335 3 HOH HOH B . Q 7 HOH 2 336 5 HOH HOH B . Q 7 HOH 3 337 6 HOH HOH B . Q 7 HOH 4 338 7 HOH HOH B . Q 7 HOH 5 339 10 HOH HOH B . Q 7 HOH 6 340 13 HOH HOH B . Q 7 HOH 7 341 14 HOH HOH B . Q 7 HOH 8 342 15 HOH HOH B . Q 7 HOH 9 343 25 HOH HOH B . Q 7 HOH 10 344 27 HOH HOH B . Q 7 HOH 11 345 30 HOH HOH B . Q 7 HOH 12 346 31 HOH HOH B . Q 7 HOH 13 347 32 HOH HOH B . Q 7 HOH 14 348 34 HOH HOH B . Q 7 HOH 15 349 36 HOH HOH B . Q 7 HOH 16 350 39 HOH HOH B . Q 7 HOH 17 351 40 HOH HOH B . Q 7 HOH 18 352 43 HOH HOH B . Q 7 HOH 19 353 44 HOH HOH B . Q 7 HOH 20 354 49 HOH HOH B . Q 7 HOH 21 355 53 HOH HOH B . Q 7 HOH 22 356 54 HOH HOH B . Q 7 HOH 23 357 65 HOH HOH B . Q 7 HOH 24 358 71 HOH HOH B . Q 7 HOH 25 359 72 HOH HOH B . Q 7 HOH 26 360 75 HOH HOH B . Q 7 HOH 27 361 77 HOH HOH B . Q 7 HOH 28 362 79 HOH HOH B . Q 7 HOH 29 363 80 HOH HOH B . Q 7 HOH 30 364 81 HOH HOH B . Q 7 HOH 31 365 82 HOH HOH B . Q 7 HOH 32 366 84 HOH HOH B . Q 7 HOH 33 367 85 HOH HOH B . Q 7 HOH 34 368 86 HOH HOH B . Q 7 HOH 35 369 103 HOH HOH B . Q 7 HOH 36 370 104 HOH HOH B . Q 7 HOH 37 371 105 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B OMC 11 D OMC 135 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" 2 E OMC 11 G OMC 135 ? C "O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE" # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,I,J,M,N,O,P 2 1 D,E,F,H,K,L,Q # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-17 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-08-28 5 'Structure model' 1 4 2017-10-18 6 'Structure model' 1 5 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Non-polymer description' 4 5 'Structure model' 'Refinement description' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model 6 6 'Structure model' struct_conn 7 6 'Structure model' struct_ref_seq_dif 8 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_conn.pdbx_dist_value' 4 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 6 'Structure model' '_struct_ref_seq_dif.details' 19 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 20 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 21 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 MOLREP . ? ? ? ? phasing ? ? ? 5 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE According to authors, glycine at position 112 is correct. This mutation likely represents a natural mutation in the 'population' of T4 phage ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 26 ? ? -69.66 1.03 2 1 PRO A 58 ? ? -44.14 151.18 3 1 PRO A 151 ? ? -34.63 131.67 4 1 GLU A 160 ? ? -93.41 -60.34 5 1 HIS A 181 ? ? -124.41 -76.67 6 1 PRO A 213 ? ? -38.44 128.31 7 1 TRP A 215 ? ? -119.65 -163.35 8 1 ASN A 218 ? ? -58.60 -5.27 9 1 SER A 248 ? ? -109.98 -156.99 10 1 GLU A 249 ? ? -123.05 -70.13 11 1 LYS A 273 ? ? -69.25 7.07 12 1 ILE A 274 ? ? -123.05 -107.98 13 1 GLU A 295 ? ? -65.49 -71.31 14 1 GLU A 300 ? ? -55.20 -3.38 15 1 GLN A 306 ? ? -81.40 34.63 16 1 ASN A 309 ? ? -176.64 75.28 17 1 PRO A 327 ? ? -56.92 -8.73 18 1 ASN B 13 ? ? -61.75 88.12 19 1 THR B 26 ? ? -67.93 9.57 20 1 LYS B 49 ? ? 174.95 164.23 21 1 GLU B 63 ? ? -35.01 149.65 22 1 SER B 93 ? ? -170.61 127.53 23 1 ASP B 120 ? ? -174.22 148.65 24 1 PRO B 151 ? ? -38.30 131.89 25 1 LYS B 197 ? ? -56.74 -97.43 26 1 PRO B 213 ? ? -49.98 99.25 27 1 ARG B 217 ? ? -45.04 -19.97 28 1 SER B 229 ? ? -85.29 -85.92 29 1 GLU B 249 ? ? -74.84 24.38 30 1 ALA B 250 ? ? -155.94 -6.71 31 1 VAL B 262 ? ? -66.75 99.54 32 1 PRO B 279 ? ? -63.95 6.87 33 1 ARG B 299 ? ? -73.20 26.10 34 1 THR B 305 ? ? -76.28 49.32 35 1 ALA B 307 ? ? -67.65 2.34 36 1 ASN B 309 ? ? -49.96 107.47 37 1 PRO B 310 ? ? -62.91 37.47 38 1 SER B 311 ? ? -129.72 -69.07 39 1 PRO B 327 ? ? -36.53 -29.58 40 1 ALA B 328 ? ? -141.98 23.71 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id F _pdbx_validate_planes.auth_seq_id 15 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.068 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PHE 231 ? CG ? G PHE 232 CG 2 1 Y 1 A PHE 231 ? CD1 ? G PHE 232 CD1 3 1 Y 1 A PHE 231 ? CD2 ? G PHE 232 CD2 4 1 Y 1 A PHE 231 ? CE1 ? G PHE 232 CE1 5 1 Y 1 A PHE 231 ? CE2 ? G PHE 232 CE2 6 1 Y 1 A PHE 231 ? CZ ? G PHE 232 CZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 232 ? G SER 233 2 1 Y 1 A GLU 233 ? G GLU 234 3 1 Y 1 A LYS 234 ? G LYS 235 4 1 Y 1 A LYS 235 ? G LYS 236 5 1 Y 1 A LYS 236 ? G LYS 237 6 1 Y 1 A SER 237 ? G SER 238 7 1 Y 1 A ASP 238 ? G ASP 239 8 1 Y 1 A LYS 239 ? G LYS 240 9 1 Y 1 A PRO 240 ? G PRO 241 10 1 Y 1 A ILE 241 ? G ILE 242 11 1 Y 1 A LYS 242 ? G LYS 243 12 1 Y 1 A ALA 243 ? G ALA 244 13 1 Y 1 A LYS 244 ? G LYS 245 14 1 Y 1 A VAL 245 ? G VAL 246 15 1 Y 1 A VAL 333 ? G VAL 334 16 1 Y 1 A SER 334 ? G SER 335 17 1 Y 1 B PHE 231 ? H PHE 232 18 1 Y 1 B SER 232 ? H SER 233 19 1 Y 1 B GLU 233 ? H GLU 234 20 1 Y 1 B LYS 234 ? H LYS 235 21 1 Y 1 B LYS 235 ? H LYS 236 22 1 Y 1 B LYS 236 ? H LYS 237 23 1 Y 1 B SER 237 ? H SER 238 24 1 Y 1 B ASP 238 ? H ASP 239 25 1 Y 1 B LYS 239 ? H LYS 240 26 1 Y 1 B PRO 240 ? H PRO 241 27 1 Y 1 B ILE 241 ? H ILE 242 28 1 Y 1 B LYS 242 ? H LYS 243 29 1 Y 1 B ALA 243 ? H ALA 244 30 1 Y 1 B LYS 244 ? H LYS 245 31 1 Y 1 B VAL 245 ? H VAL 246 32 1 Y 1 B GLU 246 ? H GLU 247 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMP P P N N 14 AMP O1P O N N 15 AMP O2P O N N 16 AMP O3P O N N 17 AMP "O5'" O N N 18 AMP "C5'" C N N 19 AMP "C4'" C N R 20 AMP "O4'" O N N 21 AMP "C3'" C N S 22 AMP "O3'" O N N 23 AMP "C2'" C N R 24 AMP "O2'" O N N 25 AMP "C1'" C N R 26 AMP N9 N Y N 27 AMP C8 C Y N 28 AMP N7 N Y N 29 AMP C5 C Y N 30 AMP C6 C Y N 31 AMP N6 N N N 32 AMP N1 N Y N 33 AMP C2 C Y N 34 AMP N3 N Y N 35 AMP C4 C Y N 36 AMP HOP2 H N N 37 AMP HOP3 H N N 38 AMP "H5'1" H N N 39 AMP "H5'2" H N N 40 AMP "H4'" H N N 41 AMP "H3'" H N N 42 AMP "HO3'" H N N 43 AMP "H2'" H N N 44 AMP "HO2'" H N N 45 AMP "H1'" H N N 46 AMP H8 H N N 47 AMP HN61 H N N 48 AMP HN62 H N N 49 AMP H2 H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 BTB C1 C N N 111 BTB O1 O N N 112 BTB C2 C N N 113 BTB C3 C N N 114 BTB O3 O N N 115 BTB C4 C N N 116 BTB O4 O N N 117 BTB N N N N 118 BTB C5 C N N 119 BTB C6 C N N 120 BTB O6 O N N 121 BTB C7 C N N 122 BTB C8 C N N 123 BTB O8 O N N 124 BTB H11 H N N 125 BTB H12 H N N 126 BTB HO1 H N N 127 BTB H31 H N N 128 BTB H32 H N N 129 BTB HO3 H N N 130 BTB H41 H N N 131 BTB H42 H N N 132 BTB HO4 H N N 133 BTB H51 H N N 134 BTB H52 H N N 135 BTB H61 H N N 136 BTB H62 H N N 137 BTB HO6 H N N 138 BTB H71 H N N 139 BTB H72 H N N 140 BTB H81 H N N 141 BTB H82 H N N 142 BTB HO8 H N N 143 CYS N N N N 144 CYS CA C N R 145 CYS C C N N 146 CYS O O N N 147 CYS CB C N N 148 CYS SG S N N 149 CYS OXT O N N 150 CYS H H N N 151 CYS H2 H N N 152 CYS HA H N N 153 CYS HB2 H N N 154 CYS HB3 H N N 155 CYS HG H N N 156 CYS HXT H N N 157 DA OP3 O N N 158 DA P P N N 159 DA OP1 O N N 160 DA OP2 O N N 161 DA "O5'" O N N 162 DA "C5'" C N N 163 DA "C4'" C N R 164 DA "O4'" O N N 165 DA "C3'" C N S 166 DA "O3'" O N N 167 DA "C2'" C N N 168 DA "C1'" C N R 169 DA N9 N Y N 170 DA C8 C Y N 171 DA N7 N Y N 172 DA C5 C Y N 173 DA C6 C Y N 174 DA N6 N N N 175 DA N1 N Y N 176 DA C2 C Y N 177 DA N3 N Y N 178 DA C4 C Y N 179 DA HOP3 H N N 180 DA HOP2 H N N 181 DA "H5'" H N N 182 DA "H5''" H N N 183 DA "H4'" H N N 184 DA "H3'" H N N 185 DA "HO3'" H N N 186 DA "H2'" H N N 187 DA "H2''" H N N 188 DA "H1'" H N N 189 DA H8 H N N 190 DA H61 H N N 191 DA H62 H N N 192 DA H2 H N N 193 DC OP3 O N N 194 DC P P N N 195 DC OP1 O N N 196 DC OP2 O N N 197 DC "O5'" O N N 198 DC "C5'" C N N 199 DC "C4'" C N R 200 DC "O4'" O N N 201 DC "C3'" C N S 202 DC "O3'" O N N 203 DC "C2'" C N N 204 DC "C1'" C N R 205 DC N1 N N N 206 DC C2 C N N 207 DC O2 O N N 208 DC N3 N N N 209 DC C4 C N N 210 DC N4 N N N 211 DC C5 C N N 212 DC C6 C N N 213 DC HOP3 H N N 214 DC HOP2 H N N 215 DC "H5'" H N N 216 DC "H5''" H N N 217 DC "H4'" H N N 218 DC "H3'" H N N 219 DC "HO3'" H N N 220 DC "H2'" H N N 221 DC "H2''" H N N 222 DC "H1'" H N N 223 DC H41 H N N 224 DC H42 H N N 225 DC H5 H N N 226 DC H6 H N N 227 DG OP3 O N N 228 DG P P N N 229 DG OP1 O N N 230 DG OP2 O N N 231 DG "O5'" O N N 232 DG "C5'" C N N 233 DG "C4'" C N R 234 DG "O4'" O N N 235 DG "C3'" C N S 236 DG "O3'" O N N 237 DG "C2'" C N N 238 DG "C1'" C N R 239 DG N9 N Y N 240 DG C8 C Y N 241 DG N7 N Y N 242 DG C5 C Y N 243 DG C6 C N N 244 DG O6 O N N 245 DG N1 N N N 246 DG C2 C N N 247 DG N2 N N N 248 DG N3 N N N 249 DG C4 C Y N 250 DG HOP3 H N N 251 DG HOP2 H N N 252 DG "H5'" H N N 253 DG "H5''" H N N 254 DG "H4'" H N N 255 DG "H3'" H N N 256 DG "HO3'" H N N 257 DG "H2'" H N N 258 DG "H2''" H N N 259 DG "H1'" H N N 260 DG H8 H N N 261 DG H1 H N N 262 DG H21 H N N 263 DG H22 H N N 264 DT OP3 O N N 265 DT P P N N 266 DT OP1 O N N 267 DT OP2 O N N 268 DT "O5'" O N N 269 DT "C5'" C N N 270 DT "C4'" C N R 271 DT "O4'" O N N 272 DT "C3'" C N S 273 DT "O3'" O N N 274 DT "C2'" C N N 275 DT "C1'" C N R 276 DT N1 N N N 277 DT C2 C N N 278 DT O2 O N N 279 DT N3 N N N 280 DT C4 C N N 281 DT O4 O N N 282 DT C5 C N N 283 DT C7 C N N 284 DT C6 C N N 285 DT HOP3 H N N 286 DT HOP2 H N N 287 DT "H5'" H N N 288 DT "H5''" H N N 289 DT "H4'" H N N 290 DT "H3'" H N N 291 DT "HO3'" H N N 292 DT "H2'" H N N 293 DT "H2''" H N N 294 DT "H1'" H N N 295 DT H3 H N N 296 DT H71 H N N 297 DT H72 H N N 298 DT H73 H N N 299 DT H6 H N N 300 GLN N N N N 301 GLN CA C N S 302 GLN C C N N 303 GLN O O N N 304 GLN CB C N N 305 GLN CG C N N 306 GLN CD C N N 307 GLN OE1 O N N 308 GLN NE2 N N N 309 GLN OXT O N N 310 GLN H H N N 311 GLN H2 H N N 312 GLN HA H N N 313 GLN HB2 H N N 314 GLN HB3 H N N 315 GLN HG2 H N N 316 GLN HG3 H N N 317 GLN HE21 H N N 318 GLN HE22 H N N 319 GLN HXT H N N 320 GLU N N N N 321 GLU CA C N S 322 GLU C C N N 323 GLU O O N N 324 GLU CB C N N 325 GLU CG C N N 326 GLU CD C N N 327 GLU OE1 O N N 328 GLU OE2 O N N 329 GLU OXT O N N 330 GLU H H N N 331 GLU H2 H N N 332 GLU HA H N N 333 GLU HB2 H N N 334 GLU HB3 H N N 335 GLU HG2 H N N 336 GLU HG3 H N N 337 GLU HE2 H N N 338 GLU HXT H N N 339 GLY N N N N 340 GLY CA C N N 341 GLY C C N N 342 GLY O O N N 343 GLY OXT O N N 344 GLY H H N N 345 GLY H2 H N N 346 GLY HA2 H N N 347 GLY HA3 H N N 348 GLY HXT H N N 349 HIS N N N N 350 HIS CA C N S 351 HIS C C N N 352 HIS O O N N 353 HIS CB C N N 354 HIS CG C Y N 355 HIS ND1 N Y N 356 HIS CD2 C Y N 357 HIS CE1 C Y N 358 HIS NE2 N Y N 359 HIS OXT O N N 360 HIS H H N N 361 HIS H2 H N N 362 HIS HA H N N 363 HIS HB2 H N N 364 HIS HB3 H N N 365 HIS HD1 H N N 366 HIS HD2 H N N 367 HIS HE1 H N N 368 HIS HE2 H N N 369 HIS HXT H N N 370 HOH O O N N 371 HOH H1 H N N 372 HOH H2 H N N 373 ILE N N N N 374 ILE CA C N S 375 ILE C C N N 376 ILE O O N N 377 ILE CB C N S 378 ILE CG1 C N N 379 ILE CG2 C N N 380 ILE CD1 C N N 381 ILE OXT O N N 382 ILE H H N N 383 ILE H2 H N N 384 ILE HA H N N 385 ILE HB H N N 386 ILE HG12 H N N 387 ILE HG13 H N N 388 ILE HG21 H N N 389 ILE HG22 H N N 390 ILE HG23 H N N 391 ILE HD11 H N N 392 ILE HD12 H N N 393 ILE HD13 H N N 394 ILE HXT H N N 395 LEU N N N N 396 LEU CA C N S 397 LEU C C N N 398 LEU O O N N 399 LEU CB C N N 400 LEU CG C N N 401 LEU CD1 C N N 402 LEU CD2 C N N 403 LEU OXT O N N 404 LEU H H N N 405 LEU H2 H N N 406 LEU HA H N N 407 LEU HB2 H N N 408 LEU HB3 H N N 409 LEU HG H N N 410 LEU HD11 H N N 411 LEU HD12 H N N 412 LEU HD13 H N N 413 LEU HD21 H N N 414 LEU HD22 H N N 415 LEU HD23 H N N 416 LEU HXT H N N 417 LYS N N N N 418 LYS CA C N S 419 LYS C C N N 420 LYS O O N N 421 LYS CB C N N 422 LYS CG C N N 423 LYS CD C N N 424 LYS CE C N N 425 LYS NZ N N N 426 LYS OXT O N N 427 LYS H H N N 428 LYS H2 H N N 429 LYS HA H N N 430 LYS HB2 H N N 431 LYS HB3 H N N 432 LYS HG2 H N N 433 LYS HG3 H N N 434 LYS HD2 H N N 435 LYS HD3 H N N 436 LYS HE2 H N N 437 LYS HE3 H N N 438 LYS HZ1 H N N 439 LYS HZ2 H N N 440 LYS HZ3 H N N 441 LYS HXT H N N 442 MET N N N N 443 MET CA C N S 444 MET C C N N 445 MET O O N N 446 MET CB C N N 447 MET CG C N N 448 MET SD S N N 449 MET CE C N N 450 MET OXT O N N 451 MET H H N N 452 MET H2 H N N 453 MET HA H N N 454 MET HB2 H N N 455 MET HB3 H N N 456 MET HG2 H N N 457 MET HG3 H N N 458 MET HE1 H N N 459 MET HE2 H N N 460 MET HE3 H N N 461 MET HXT H N N 462 OMC N1 N N N 463 OMC C2 C N N 464 OMC N3 N N N 465 OMC C4 C N N 466 OMC C5 C N N 467 OMC C6 C N N 468 OMC O2 O N N 469 OMC N4 N N N 470 OMC "C1'" C N R 471 OMC "C2'" C N R 472 OMC "O2'" O N N 473 OMC CM2 C N N 474 OMC "C3'" C N R 475 OMC "C4'" C N R 476 OMC "O4'" O N N 477 OMC "O3'" O N N 478 OMC "C5'" C N N 479 OMC "O5'" O N N 480 OMC P P N N 481 OMC OP1 O N N 482 OMC OP2 O N N 483 OMC OP3 O N N 484 OMC H5 H N N 485 OMC H6 H N N 486 OMC HN41 H N N 487 OMC HN42 H N N 488 OMC "H1'" H N N 489 OMC "H2'" H N N 490 OMC HM21 H N N 491 OMC HM22 H N N 492 OMC HM23 H N N 493 OMC "H3'" H N N 494 OMC "H4'" H N N 495 OMC "HO3'" H N N 496 OMC "H5'" H N N 497 OMC "H5''" H N N 498 OMC HOP2 H N N 499 OMC HOP3 H N N 500 PHE N N N N 501 PHE CA C N S 502 PHE C C N N 503 PHE O O N N 504 PHE CB C N N 505 PHE CG C Y N 506 PHE CD1 C Y N 507 PHE CD2 C Y N 508 PHE CE1 C Y N 509 PHE CE2 C Y N 510 PHE CZ C Y N 511 PHE OXT O N N 512 PHE H H N N 513 PHE H2 H N N 514 PHE HA H N N 515 PHE HB2 H N N 516 PHE HB3 H N N 517 PHE HD1 H N N 518 PHE HD2 H N N 519 PHE HE1 H N N 520 PHE HE2 H N N 521 PHE HZ H N N 522 PHE HXT H N N 523 PRO N N N N 524 PRO CA C N S 525 PRO C C N N 526 PRO O O N N 527 PRO CB C N N 528 PRO CG C N N 529 PRO CD C N N 530 PRO OXT O N N 531 PRO H H N N 532 PRO HA H N N 533 PRO HB2 H N N 534 PRO HB3 H N N 535 PRO HG2 H N N 536 PRO HG3 H N N 537 PRO HD2 H N N 538 PRO HD3 H N N 539 PRO HXT H N N 540 SER N N N N 541 SER CA C N S 542 SER C C N N 543 SER O O N N 544 SER CB C N N 545 SER OG O N N 546 SER OXT O N N 547 SER H H N N 548 SER H2 H N N 549 SER HA H N N 550 SER HB2 H N N 551 SER HB3 H N N 552 SER HG H N N 553 SER HXT H N N 554 THR N N N N 555 THR CA C N S 556 THR C C N N 557 THR O O N N 558 THR CB C N R 559 THR OG1 O N N 560 THR CG2 C N N 561 THR OXT O N N 562 THR H H N N 563 THR H2 H N N 564 THR HA H N N 565 THR HB H N N 566 THR HG1 H N N 567 THR HG21 H N N 568 THR HG22 H N N 569 THR HG23 H N N 570 THR HXT H N N 571 TRP N N N N 572 TRP CA C N S 573 TRP C C N N 574 TRP O O N N 575 TRP CB C N N 576 TRP CG C Y N 577 TRP CD1 C Y N 578 TRP CD2 C Y N 579 TRP NE1 N Y N 580 TRP CE2 C Y N 581 TRP CE3 C Y N 582 TRP CZ2 C Y N 583 TRP CZ3 C Y N 584 TRP CH2 C Y N 585 TRP OXT O N N 586 TRP H H N N 587 TRP H2 H N N 588 TRP HA H N N 589 TRP HB2 H N N 590 TRP HB3 H N N 591 TRP HD1 H N N 592 TRP HE1 H N N 593 TRP HE3 H N N 594 TRP HZ2 H N N 595 TRP HZ3 H N N 596 TRP HH2 H N N 597 TRP HXT H N N 598 TYR N N N N 599 TYR CA C N S 600 TYR C C N N 601 TYR O O N N 602 TYR CB C N N 603 TYR CG C Y N 604 TYR CD1 C Y N 605 TYR CD2 C Y N 606 TYR CE1 C Y N 607 TYR CE2 C Y N 608 TYR CZ C Y N 609 TYR OH O N N 610 TYR OXT O N N 611 TYR H H N N 612 TYR H2 H N N 613 TYR HA H N N 614 TYR HB2 H N N 615 TYR HB3 H N N 616 TYR HD1 H N N 617 TYR HD2 H N N 618 TYR HE1 H N N 619 TYR HE2 H N N 620 TYR HH H N N 621 TYR HXT H N N 622 VAL N N N N 623 VAL CA C N S 624 VAL C C N N 625 VAL O O N N 626 VAL CB C N N 627 VAL CG1 C N N 628 VAL CG2 C N N 629 VAL OXT O N N 630 VAL H H N N 631 VAL H2 H N N 632 VAL HA H N N 633 VAL HB H N N 634 VAL HG11 H N N 635 VAL HG12 H N N 636 VAL HG13 H N N 637 VAL HG21 H N N 638 VAL HG22 H N N 639 VAL HG23 H N N 640 VAL HXT H N N 641 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMP P O1P doub N N 13 AMP P O2P sing N N 14 AMP P O3P sing N N 15 AMP P "O5'" sing N N 16 AMP O2P HOP2 sing N N 17 AMP O3P HOP3 sing N N 18 AMP "O5'" "C5'" sing N N 19 AMP "C5'" "C4'" sing N N 20 AMP "C5'" "H5'1" sing N N 21 AMP "C5'" "H5'2" sing N N 22 AMP "C4'" "O4'" sing N N 23 AMP "C4'" "C3'" sing N N 24 AMP "C4'" "H4'" sing N N 25 AMP "O4'" "C1'" sing N N 26 AMP "C3'" "O3'" sing N N 27 AMP "C3'" "C2'" sing N N 28 AMP "C3'" "H3'" sing N N 29 AMP "O3'" "HO3'" sing N N 30 AMP "C2'" "O2'" sing N N 31 AMP "C2'" "C1'" sing N N 32 AMP "C2'" "H2'" sing N N 33 AMP "O2'" "HO2'" sing N N 34 AMP "C1'" N9 sing N N 35 AMP "C1'" "H1'" sing N N 36 AMP N9 C8 sing Y N 37 AMP N9 C4 sing Y N 38 AMP C8 N7 doub Y N 39 AMP C8 H8 sing N N 40 AMP N7 C5 sing Y N 41 AMP C5 C6 sing Y N 42 AMP C5 C4 doub Y N 43 AMP C6 N6 sing N N 44 AMP C6 N1 doub Y N 45 AMP N6 HN61 sing N N 46 AMP N6 HN62 sing N N 47 AMP N1 C2 sing Y N 48 AMP C2 N3 doub Y N 49 AMP C2 H2 sing N N 50 AMP N3 C4 sing Y N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 BTB C1 O1 sing N N 109 BTB C1 C2 sing N N 110 BTB C1 H11 sing N N 111 BTB C1 H12 sing N N 112 BTB O1 HO1 sing N N 113 BTB C2 C3 sing N N 114 BTB C2 C4 sing N N 115 BTB C2 N sing N N 116 BTB C3 O3 sing N N 117 BTB C3 H31 sing N N 118 BTB C3 H32 sing N N 119 BTB O3 HO3 sing N N 120 BTB C4 O4 sing N N 121 BTB C4 H41 sing N N 122 BTB C4 H42 sing N N 123 BTB O4 HO4 sing N N 124 BTB N C5 sing N N 125 BTB N C7 sing N N 126 BTB C5 C6 sing N N 127 BTB C5 H51 sing N N 128 BTB C5 H52 sing N N 129 BTB C6 O6 sing N N 130 BTB C6 H61 sing N N 131 BTB C6 H62 sing N N 132 BTB O6 HO6 sing N N 133 BTB C7 C8 sing N N 134 BTB C7 H71 sing N N 135 BTB C7 H72 sing N N 136 BTB C8 O8 sing N N 137 BTB C8 H81 sing N N 138 BTB C8 H82 sing N N 139 BTB O8 HO8 sing N N 140 CYS N CA sing N N 141 CYS N H sing N N 142 CYS N H2 sing N N 143 CYS CA C sing N N 144 CYS CA CB sing N N 145 CYS CA HA sing N N 146 CYS C O doub N N 147 CYS C OXT sing N N 148 CYS CB SG sing N N 149 CYS CB HB2 sing N N 150 CYS CB HB3 sing N N 151 CYS SG HG sing N N 152 CYS OXT HXT sing N N 153 DA OP3 P sing N N 154 DA OP3 HOP3 sing N N 155 DA P OP1 doub N N 156 DA P OP2 sing N N 157 DA P "O5'" sing N N 158 DA OP2 HOP2 sing N N 159 DA "O5'" "C5'" sing N N 160 DA "C5'" "C4'" sing N N 161 DA "C5'" "H5'" sing N N 162 DA "C5'" "H5''" sing N N 163 DA "C4'" "O4'" sing N N 164 DA "C4'" "C3'" sing N N 165 DA "C4'" "H4'" sing N N 166 DA "O4'" "C1'" sing N N 167 DA "C3'" "O3'" sing N N 168 DA "C3'" "C2'" sing N N 169 DA "C3'" "H3'" sing N N 170 DA "O3'" "HO3'" sing N N 171 DA "C2'" "C1'" sing N N 172 DA "C2'" "H2'" sing N N 173 DA "C2'" "H2''" sing N N 174 DA "C1'" N9 sing N N 175 DA "C1'" "H1'" sing N N 176 DA N9 C8 sing Y N 177 DA N9 C4 sing Y N 178 DA C8 N7 doub Y N 179 DA C8 H8 sing N N 180 DA N7 C5 sing Y N 181 DA C5 C6 sing Y N 182 DA C5 C4 doub Y N 183 DA C6 N6 sing N N 184 DA C6 N1 doub Y N 185 DA N6 H61 sing N N 186 DA N6 H62 sing N N 187 DA N1 C2 sing Y N 188 DA C2 N3 doub Y N 189 DA C2 H2 sing N N 190 DA N3 C4 sing Y N 191 DC OP3 P sing N N 192 DC OP3 HOP3 sing N N 193 DC P OP1 doub N N 194 DC P OP2 sing N N 195 DC P "O5'" sing N N 196 DC OP2 HOP2 sing N N 197 DC "O5'" "C5'" sing N N 198 DC "C5'" "C4'" sing N N 199 DC "C5'" "H5'" sing N N 200 DC "C5'" "H5''" sing N N 201 DC "C4'" "O4'" sing N N 202 DC "C4'" "C3'" sing N N 203 DC "C4'" "H4'" sing N N 204 DC "O4'" "C1'" sing N N 205 DC "C3'" "O3'" sing N N 206 DC "C3'" "C2'" sing N N 207 DC "C3'" "H3'" sing N N 208 DC "O3'" "HO3'" sing N N 209 DC "C2'" "C1'" sing N N 210 DC "C2'" "H2'" sing N N 211 DC "C2'" "H2''" sing N N 212 DC "C1'" N1 sing N N 213 DC "C1'" "H1'" sing N N 214 DC N1 C2 sing N N 215 DC N1 C6 sing N N 216 DC C2 O2 doub N N 217 DC C2 N3 sing N N 218 DC N3 C4 doub N N 219 DC C4 N4 sing N N 220 DC C4 C5 sing N N 221 DC N4 H41 sing N N 222 DC N4 H42 sing N N 223 DC C5 C6 doub N N 224 DC C5 H5 sing N N 225 DC C6 H6 sing N N 226 DG OP3 P sing N N 227 DG OP3 HOP3 sing N N 228 DG P OP1 doub N N 229 DG P OP2 sing N N 230 DG P "O5'" sing N N 231 DG OP2 HOP2 sing N N 232 DG "O5'" "C5'" sing N N 233 DG "C5'" "C4'" sing N N 234 DG "C5'" "H5'" sing N N 235 DG "C5'" "H5''" sing N N 236 DG "C4'" "O4'" sing N N 237 DG "C4'" "C3'" sing N N 238 DG "C4'" "H4'" sing N N 239 DG "O4'" "C1'" sing N N 240 DG "C3'" "O3'" sing N N 241 DG "C3'" "C2'" sing N N 242 DG "C3'" "H3'" sing N N 243 DG "O3'" "HO3'" sing N N 244 DG "C2'" "C1'" sing N N 245 DG "C2'" "H2'" sing N N 246 DG "C2'" "H2''" sing N N 247 DG "C1'" N9 sing N N 248 DG "C1'" "H1'" sing N N 249 DG N9 C8 sing Y N 250 DG N9 C4 sing Y N 251 DG C8 N7 doub Y N 252 DG C8 H8 sing N N 253 DG N7 C5 sing Y N 254 DG C5 C6 sing N N 255 DG C5 C4 doub Y N 256 DG C6 O6 doub N N 257 DG C6 N1 sing N N 258 DG N1 C2 sing N N 259 DG N1 H1 sing N N 260 DG C2 N2 sing N N 261 DG C2 N3 doub N N 262 DG N2 H21 sing N N 263 DG N2 H22 sing N N 264 DG N3 C4 sing N N 265 DT OP3 P sing N N 266 DT OP3 HOP3 sing N N 267 DT P OP1 doub N N 268 DT P OP2 sing N N 269 DT P "O5'" sing N N 270 DT OP2 HOP2 sing N N 271 DT "O5'" "C5'" sing N N 272 DT "C5'" "C4'" sing N N 273 DT "C5'" "H5'" sing N N 274 DT "C5'" "H5''" sing N N 275 DT "C4'" "O4'" sing N N 276 DT "C4'" "C3'" sing N N 277 DT "C4'" "H4'" sing N N 278 DT "O4'" "C1'" sing N N 279 DT "C3'" "O3'" sing N N 280 DT "C3'" "C2'" sing N N 281 DT "C3'" "H3'" sing N N 282 DT "O3'" "HO3'" sing N N 283 DT "C2'" "C1'" sing N N 284 DT "C2'" "H2'" sing N N 285 DT "C2'" "H2''" sing N N 286 DT "C1'" N1 sing N N 287 DT "C1'" "H1'" sing N N 288 DT N1 C2 sing N N 289 DT N1 C6 sing N N 290 DT C2 O2 doub N N 291 DT C2 N3 sing N N 292 DT N3 C4 sing N N 293 DT N3 H3 sing N N 294 DT C4 O4 doub N N 295 DT C4 C5 sing N N 296 DT C5 C7 sing N N 297 DT C5 C6 doub N N 298 DT C7 H71 sing N N 299 DT C7 H72 sing N N 300 DT C7 H73 sing N N 301 DT C6 H6 sing N N 302 GLN N CA sing N N 303 GLN N H sing N N 304 GLN N H2 sing N N 305 GLN CA C sing N N 306 GLN CA CB sing N N 307 GLN CA HA sing N N 308 GLN C O doub N N 309 GLN C OXT sing N N 310 GLN CB CG sing N N 311 GLN CB HB2 sing N N 312 GLN CB HB3 sing N N 313 GLN CG CD sing N N 314 GLN CG HG2 sing N N 315 GLN CG HG3 sing N N 316 GLN CD OE1 doub N N 317 GLN CD NE2 sing N N 318 GLN NE2 HE21 sing N N 319 GLN NE2 HE22 sing N N 320 GLN OXT HXT sing N N 321 GLU N CA sing N N 322 GLU N H sing N N 323 GLU N H2 sing N N 324 GLU CA C sing N N 325 GLU CA CB sing N N 326 GLU CA HA sing N N 327 GLU C O doub N N 328 GLU C OXT sing N N 329 GLU CB CG sing N N 330 GLU CB HB2 sing N N 331 GLU CB HB3 sing N N 332 GLU CG CD sing N N 333 GLU CG HG2 sing N N 334 GLU CG HG3 sing N N 335 GLU CD OE1 doub N N 336 GLU CD OE2 sing N N 337 GLU OE2 HE2 sing N N 338 GLU OXT HXT sing N N 339 GLY N CA sing N N 340 GLY N H sing N N 341 GLY N H2 sing N N 342 GLY CA C sing N N 343 GLY CA HA2 sing N N 344 GLY CA HA3 sing N N 345 GLY C O doub N N 346 GLY C OXT sing N N 347 GLY OXT HXT sing N N 348 HIS N CA sing N N 349 HIS N H sing N N 350 HIS N H2 sing N N 351 HIS CA C sing N N 352 HIS CA CB sing N N 353 HIS CA HA sing N N 354 HIS C O doub N N 355 HIS C OXT sing N N 356 HIS CB CG sing N N 357 HIS CB HB2 sing N N 358 HIS CB HB3 sing N N 359 HIS CG ND1 sing Y N 360 HIS CG CD2 doub Y N 361 HIS ND1 CE1 doub Y N 362 HIS ND1 HD1 sing N N 363 HIS CD2 NE2 sing Y N 364 HIS CD2 HD2 sing N N 365 HIS CE1 NE2 sing Y N 366 HIS CE1 HE1 sing N N 367 HIS NE2 HE2 sing N N 368 HIS OXT HXT sing N N 369 HOH O H1 sing N N 370 HOH O H2 sing N N 371 ILE N CA sing N N 372 ILE N H sing N N 373 ILE N H2 sing N N 374 ILE CA C sing N N 375 ILE CA CB sing N N 376 ILE CA HA sing N N 377 ILE C O doub N N 378 ILE C OXT sing N N 379 ILE CB CG1 sing N N 380 ILE CB CG2 sing N N 381 ILE CB HB sing N N 382 ILE CG1 CD1 sing N N 383 ILE CG1 HG12 sing N N 384 ILE CG1 HG13 sing N N 385 ILE CG2 HG21 sing N N 386 ILE CG2 HG22 sing N N 387 ILE CG2 HG23 sing N N 388 ILE CD1 HD11 sing N N 389 ILE CD1 HD12 sing N N 390 ILE CD1 HD13 sing N N 391 ILE OXT HXT sing N N 392 LEU N CA sing N N 393 LEU N H sing N N 394 LEU N H2 sing N N 395 LEU CA C sing N N 396 LEU CA CB sing N N 397 LEU CA HA sing N N 398 LEU C O doub N N 399 LEU C OXT sing N N 400 LEU CB CG sing N N 401 LEU CB HB2 sing N N 402 LEU CB HB3 sing N N 403 LEU CG CD1 sing N N 404 LEU CG CD2 sing N N 405 LEU CG HG sing N N 406 LEU CD1 HD11 sing N N 407 LEU CD1 HD12 sing N N 408 LEU CD1 HD13 sing N N 409 LEU CD2 HD21 sing N N 410 LEU CD2 HD22 sing N N 411 LEU CD2 HD23 sing N N 412 LEU OXT HXT sing N N 413 LYS N CA sing N N 414 LYS N H sing N N 415 LYS N H2 sing N N 416 LYS CA C sing N N 417 LYS CA CB sing N N 418 LYS CA HA sing N N 419 LYS C O doub N N 420 LYS C OXT sing N N 421 LYS CB CG sing N N 422 LYS CB HB2 sing N N 423 LYS CB HB3 sing N N 424 LYS CG CD sing N N 425 LYS CG HG2 sing N N 426 LYS CG HG3 sing N N 427 LYS CD CE sing N N 428 LYS CD HD2 sing N N 429 LYS CD HD3 sing N N 430 LYS CE NZ sing N N 431 LYS CE HE2 sing N N 432 LYS CE HE3 sing N N 433 LYS NZ HZ1 sing N N 434 LYS NZ HZ2 sing N N 435 LYS NZ HZ3 sing N N 436 LYS OXT HXT sing N N 437 MET N CA sing N N 438 MET N H sing N N 439 MET N H2 sing N N 440 MET CA C sing N N 441 MET CA CB sing N N 442 MET CA HA sing N N 443 MET C O doub N N 444 MET C OXT sing N N 445 MET CB CG sing N N 446 MET CB HB2 sing N N 447 MET CB HB3 sing N N 448 MET CG SD sing N N 449 MET CG HG2 sing N N 450 MET CG HG3 sing N N 451 MET SD CE sing N N 452 MET CE HE1 sing N N 453 MET CE HE2 sing N N 454 MET CE HE3 sing N N 455 MET OXT HXT sing N N 456 OMC N1 C2 sing N N 457 OMC N1 C6 sing N N 458 OMC N1 "C1'" sing N N 459 OMC C2 N3 sing N N 460 OMC C2 O2 doub N N 461 OMC N3 C4 doub N N 462 OMC C4 C5 sing N N 463 OMC C4 N4 sing N N 464 OMC C5 C6 doub N N 465 OMC C5 H5 sing N N 466 OMC C6 H6 sing N N 467 OMC N4 HN41 sing N N 468 OMC N4 HN42 sing N N 469 OMC "C1'" "C2'" sing N N 470 OMC "C1'" "O4'" sing N N 471 OMC "C1'" "H1'" sing N N 472 OMC "C2'" "O2'" sing N N 473 OMC "C2'" "C3'" sing N N 474 OMC "C2'" "H2'" sing N N 475 OMC "O2'" CM2 sing N N 476 OMC CM2 HM21 sing N N 477 OMC CM2 HM22 sing N N 478 OMC CM2 HM23 sing N N 479 OMC "C3'" "C4'" sing N N 480 OMC "C3'" "O3'" sing N N 481 OMC "C3'" "H3'" sing N N 482 OMC "C4'" "O4'" sing N N 483 OMC "C4'" "C5'" sing N N 484 OMC "C4'" "H4'" sing N N 485 OMC "O3'" "HO3'" sing N N 486 OMC "C5'" "O5'" sing N N 487 OMC "C5'" "H5'" sing N N 488 OMC "C5'" "H5''" sing N N 489 OMC "O5'" P sing N N 490 OMC P OP1 doub N N 491 OMC P OP2 sing N N 492 OMC P OP3 sing N N 493 OMC OP2 HOP2 sing N N 494 OMC OP3 HOP3 sing N N 495 PHE N CA sing N N 496 PHE N H sing N N 497 PHE N H2 sing N N 498 PHE CA C sing N N 499 PHE CA CB sing N N 500 PHE CA HA sing N N 501 PHE C O doub N N 502 PHE C OXT sing N N 503 PHE CB CG sing N N 504 PHE CB HB2 sing N N 505 PHE CB HB3 sing N N 506 PHE CG CD1 doub Y N 507 PHE CG CD2 sing Y N 508 PHE CD1 CE1 sing Y N 509 PHE CD1 HD1 sing N N 510 PHE CD2 CE2 doub Y N 511 PHE CD2 HD2 sing N N 512 PHE CE1 CZ doub Y N 513 PHE CE1 HE1 sing N N 514 PHE CE2 CZ sing Y N 515 PHE CE2 HE2 sing N N 516 PHE CZ HZ sing N N 517 PHE OXT HXT sing N N 518 PRO N CA sing N N 519 PRO N CD sing N N 520 PRO N H sing N N 521 PRO CA C sing N N 522 PRO CA CB sing N N 523 PRO CA HA sing N N 524 PRO C O doub N N 525 PRO C OXT sing N N 526 PRO CB CG sing N N 527 PRO CB HB2 sing N N 528 PRO CB HB3 sing N N 529 PRO CG CD sing N N 530 PRO CG HG2 sing N N 531 PRO CG HG3 sing N N 532 PRO CD HD2 sing N N 533 PRO CD HD3 sing N N 534 PRO OXT HXT sing N N 535 SER N CA sing N N 536 SER N H sing N N 537 SER N H2 sing N N 538 SER CA C sing N N 539 SER CA CB sing N N 540 SER CA HA sing N N 541 SER C O doub N N 542 SER C OXT sing N N 543 SER CB OG sing N N 544 SER CB HB2 sing N N 545 SER CB HB3 sing N N 546 SER OG HG sing N N 547 SER OXT HXT sing N N 548 THR N CA sing N N 549 THR N H sing N N 550 THR N H2 sing N N 551 THR CA C sing N N 552 THR CA CB sing N N 553 THR CA HA sing N N 554 THR C O doub N N 555 THR C OXT sing N N 556 THR CB OG1 sing N N 557 THR CB CG2 sing N N 558 THR CB HB sing N N 559 THR OG1 HG1 sing N N 560 THR CG2 HG21 sing N N 561 THR CG2 HG22 sing N N 562 THR CG2 HG23 sing N N 563 THR OXT HXT sing N N 564 TRP N CA sing N N 565 TRP N H sing N N 566 TRP N H2 sing N N 567 TRP CA C sing N N 568 TRP CA CB sing N N 569 TRP CA HA sing N N 570 TRP C O doub N N 571 TRP C OXT sing N N 572 TRP CB CG sing N N 573 TRP CB HB2 sing N N 574 TRP CB HB3 sing N N 575 TRP CG CD1 doub Y N 576 TRP CG CD2 sing Y N 577 TRP CD1 NE1 sing Y N 578 TRP CD1 HD1 sing N N 579 TRP CD2 CE2 doub Y N 580 TRP CD2 CE3 sing Y N 581 TRP NE1 CE2 sing Y N 582 TRP NE1 HE1 sing N N 583 TRP CE2 CZ2 sing Y N 584 TRP CE3 CZ3 doub Y N 585 TRP CE3 HE3 sing N N 586 TRP CZ2 CH2 doub Y N 587 TRP CZ2 HZ2 sing N N 588 TRP CZ3 CH2 sing Y N 589 TRP CZ3 HZ3 sing N N 590 TRP CH2 HH2 sing N N 591 TRP OXT HXT sing N N 592 TYR N CA sing N N 593 TYR N H sing N N 594 TYR N H2 sing N N 595 TYR CA C sing N N 596 TYR CA CB sing N N 597 TYR CA HA sing N N 598 TYR C O doub N N 599 TYR C OXT sing N N 600 TYR CB CG sing N N 601 TYR CB HB2 sing N N 602 TYR CB HB3 sing N N 603 TYR CG CD1 doub Y N 604 TYR CG CD2 sing Y N 605 TYR CD1 CE1 sing Y N 606 TYR CD1 HD1 sing N N 607 TYR CD2 CE2 doub Y N 608 TYR CD2 HD2 sing N N 609 TYR CE1 CZ doub Y N 610 TYR CE1 HE1 sing N N 611 TYR CE2 CZ sing Y N 612 TYR CE2 HE2 sing N N 613 TYR CZ OH sing N N 614 TYR OH HH sing N N 615 TYR OXT HXT sing N N 616 VAL N CA sing N N 617 VAL N H sing N N 618 VAL N H2 sing N N 619 VAL CA C sing N N 620 VAL CA CB sing N N 621 VAL CA HA sing N N 622 VAL C O doub N N 623 VAL C OXT sing N N 624 VAL CB CG1 sing N N 625 VAL CB CG2 sing N N 626 VAL CB HB sing N N 627 VAL CG1 HG11 sing N N 628 VAL CG1 HG12 sing N N 629 VAL CG1 HG13 sing N N 630 VAL CG2 HG21 sing N N 631 VAL CG2 HG22 sing N N 632 VAL CG2 HG23 sing N N 633 VAL OXT HXT sing N N 634 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2HVS 'double helix' 2HVS 'b-form double helix' 2HVS 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 C DT 12 1_555 -0.683 0.343 -1.037 -3.565 -10.805 -2.687 1 C_DA1:DT248_E C 1 ? E 248 ? ? ? 1 A DT 2 1_555 C DA 11 1_555 -1.267 -0.064 -0.693 17.037 -14.653 -15.524 2 C_DT2:DA247_E C 2 ? E 247 ? 20 1 1 A DT 3 1_555 C DA 10 1_555 0.246 0.200 -0.086 6.644 -13.711 -11.783 3 C_DT3:DA246_E C 3 ? E 246 ? 20 1 1 A DC 4 1_555 C DG 9 1_555 0.653 0.195 -0.010 -9.770 -28.327 -0.024 4 C_DC4:DG245_E C 4 ? E 245 ? ? ? 1 A DC 5 1_555 C DG 8 1_555 -1.850 0.295 0.819 -10.238 -11.096 -1.724 5 C_DC5:DG244_E C 5 ? E 244 ? ? ? 1 A DG 6 1_555 C DC 7 1_555 0.680 0.424 0.062 0.422 -12.614 4.132 6 C_DG6:DC243_E C 6 ? E 243 ? ? 1 1 A DA 7 1_555 C DT 6 1_555 -0.836 -0.097 0.495 3.462 -0.309 -5.516 7 C_DA7:DT242_E C 7 ? E 242 ? 20 1 1 A DT 8 1_555 C DA 5 1_555 0.392 0.070 0.400 4.296 -5.321 3.664 8 C_DT8:DA241_E C 8 ? E 241 ? 20 1 1 A DA 9 1_555 C DT 4 1_555 -0.244 -0.142 -0.375 -5.051 -2.366 -3.890 9 C_DA9:DT240_E C 9 ? E 240 ? 20 1 1 A DG 10 1_555 C DC 3 1_555 -0.244 -0.224 -0.252 -2.687 -10.039 -0.056 10 C_DG10:DC239_E C 10 ? E 239 ? 19 1 1 A DT 11 1_555 C DA 2 1_555 -0.593 0.313 -0.552 4.920 -12.021 2.130 11 C_DT11:DA238_E C 11 ? E 238 ? 20 1 1 A DG 12 1_555 C DC 1 1_555 -0.301 0.301 0.655 14.431 -6.255 5.144 12 C_DG12:DC237_E C 12 ? E 237 ? ? 1 1 A DG 13 1_555 B DC 12 1_555 -0.103 -0.203 -0.365 12.789 -2.418 -4.420 13 C_DG13:DC136_D C 13 ? D 136 ? 19 1 1 A DG 14 1_555 B OMC 11 1_555 -0.155 -0.258 -0.382 5.824 -13.506 -3.777 14 C_DG14:OMC135_D C 14 ? D 135 ? 19 1 1 A DG 15 1_555 B DC 10 1_555 0.957 -0.300 -1.452 -29.109 5.769 -3.845 15 C_DG15:DC134_D C 15 ? D 134 ? 19 1 1 A DT 16 1_555 B DA 9 1_555 -0.563 -0.009 -0.360 -8.173 -0.868 -8.498 16 C_DT16:DA133_D C 16 ? D 133 ? 20 1 1 A DC 17 1_555 B DG 8 1_555 -0.334 0.708 -0.150 -4.391 -3.466 7.527 17 C_DC17:DG132_D C 17 ? D 132 ? ? ? 1 A DG 18 1_555 B DC 7 1_555 0.111 -0.105 0.111 11.196 1.314 -6.915 18 C_DG18:DC131_D C 18 ? D 131 ? 19 1 1 A DC 19 1_555 B DG 6 1_555 1.645 -0.224 -0.794 25.642 -5.032 0.802 19 C_DC19:DG130_D C 19 ? D 130 ? 19 1 1 A DT 22 1_555 B DA 3 1_555 -0.657 0.263 0.261 0.314 -10.545 2.769 20 C_DT22:DA127_D C 22 ? D 127 ? 20 1 1 A DG 24 1_555 B DC 1 1_555 -0.404 -0.310 0.161 -12.929 -6.586 -8.629 21 C_DG24:DC125_D C 24 ? D 125 ? 19 1 1 D DA 1 1_555 F DT 12 1_555 -3.775 0.178 -0.133 -11.309 -24.361 35.634 22 F_DA1:DT248_H F 1 ? H 248 ? ? ? 1 D DT 2 1_555 F DA 11 1_555 -0.774 -0.311 -0.410 -3.446 -13.320 6.872 23 F_DT2:DA247_H F 2 ? H 247 ? 20 1 1 D DT 3 1_555 F DA 10 1_555 -1.251 0.230 -0.419 -4.418 -23.924 -8.185 24 F_DT3:DA246_H F 3 ? H 246 ? 20 1 1 D DC 4 1_555 F DG 9 1_555 -0.888 0.513 0.187 -4.875 -12.605 -10.149 25 F_DC4:DG245_H F 4 ? H 245 ? ? ? 1 D DG 6 1_555 F DC 7 1_555 1.662 0.199 -0.111 -4.157 -3.935 -2.136 26 F_DG6:DC243_H F 6 ? H 243 ? 19 1 1 D DA 7 1_555 F DT 6 1_555 -0.096 -0.172 -0.382 -1.135 -1.817 0.982 27 F_DA7:DT242_H F 7 ? H 242 ? 20 1 1 D DT 8 1_555 F DA 5 1_555 -0.179 0.502 -0.346 13.491 -4.250 10.142 28 F_DT8:DA241_H F 8 ? H 241 ? ? ? 1 D DG 10 1_555 F DC 3 1_555 0.106 -0.319 -0.231 -1.018 -7.621 -3.160 29 F_DG10:DC239_H F 10 ? H 239 ? 19 1 1 D DT 11 1_555 F DA 2 1_555 -1.489 -0.244 -0.451 3.578 -13.679 -3.177 30 F_DT11:DA238_H F 11 ? H 238 ? 20 1 1 D DG 12 1_555 F DC 1 1_555 -1.262 -0.446 0.420 8.889 -10.379 -0.348 31 F_DG12:DC237_H F 12 ? H 237 ? 19 1 1 D DG 13 1_555 E DC 12 1_555 0.089 -0.018 -0.051 7.823 -4.733 -4.314 32 F_DG13:DC136_G F 13 ? G 136 ? 19 1 1 D DG 14 1_555 E OMC 11 1_555 -0.755 -0.322 -0.196 7.270 -10.900 -8.246 33 F_DG14:OMC135_G F 14 ? G 135 ? 19 1 1 D DG 15 1_555 E DC 10 1_555 0.609 -0.085 -0.791 -24.914 -9.005 -4.773 34 F_DG15:DC134_G F 15 ? G 134 ? 19 1 1 D DT 16 1_555 E DA 9 1_555 -0.851 -0.104 0.056 -14.996 -3.621 -7.674 35 F_DT16:DA133_G F 16 ? G 133 ? 20 1 1 D DC 17 1_555 E DG 8 1_555 0.109 -0.183 -0.020 -2.265 -3.089 -0.140 36 F_DC17:DG132_G F 17 ? G 132 ? 19 1 1 D DG 18 1_555 E DC 7 1_555 -0.680 -0.207 -0.126 1.002 -3.888 -8.969 37 F_DG18:DC131_G F 18 ? G 131 ? 19 1 1 D DC 19 1_555 E DG 6 1_555 -0.087 -0.278 -0.446 11.430 -4.898 -1.389 38 F_DC19:DG130_G F 19 ? G 130 ? 19 1 1 D DA 20 1_555 E DT 5 1_555 0.142 -0.173 0.024 7.316 -13.729 -5.478 39 F_DA20:DT129_G F 20 ? G 129 ? 20 1 1 D DA 21 1_555 E DT 4 1_555 -0.343 0.158 0.408 7.184 -11.451 -2.916 40 F_DA21:DT128_G F 21 ? G 128 ? 20 1 1 D DT 22 1_555 E DA 3 1_555 0.508 -0.110 0.347 -0.386 -15.142 -1.752 41 F_DT22:DA127_G F 22 ? G 127 ? 20 1 1 D DG 24 1_555 E DC 1 1_555 -0.382 -0.322 0.109 -17.751 -9.988 -3.469 42 F_DG24:DC125_G F 24 ? G 125 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 C DT 12 1_555 A DT 2 1_555 C DA 11 1_555 -0.714 -0.566 2.899 -5.849 -2.117 28.034 -0.706 0.236 3.016 -4.303 11.888 28.702 1 CC_DA1DT2:DA247DT248_EE C 1 ? E 248 ? C 2 ? E 247 ? 1 A DT 2 1_555 C DA 11 1_555 A DT 3 1_555 C DA 10 1_555 0.562 0.135 3.660 -2.269 -1.651 41.195 0.389 -1.068 3.618 -2.344 3.220 41.286 2 CC_DT2DT3:DA246DA247_EE C 2 ? E 247 ? C 3 ? E 246 ? 1 A DT 3 1_555 C DA 10 1_555 A DC 4 1_555 C DG 9 1_555 1.064 -0.742 3.455 7.828 5.322 42.967 -1.532 -0.628 3.476 7.162 -10.535 43.949 3 CC_DT3DC4:DG245DA246_EE C 3 ? E 246 ? C 4 ? E 245 ? 1 A DC 4 1_555 C DG 9 1_555 A DC 5 1_555 C DG 8 1_555 0.752 0.026 3.549 -4.861 -5.872 24.412 1.835 -3.170 3.246 -13.472 11.152 25.557 4 CC_DC4DC5:DG244DG245_EE C 4 ? E 245 ? C 5 ? E 244 ? 1 A DC 5 1_555 C DG 8 1_555 A DG 6 1_555 C DC 7 1_555 0.357 1.408 3.244 6.023 0.204 46.644 1.748 0.048 3.269 0.256 -7.570 47.010 5 CC_DC5DG6:DC243DG244_EE C 5 ? E 244 ? C 6 ? E 243 ? 1 A DG 6 1_555 C DC 7 1_555 A DA 7 1_555 C DT 6 1_555 -0.365 0.526 3.058 -7.036 7.148 31.213 -0.257 -0.525 3.106 12.875 12.674 32.746 6 CC_DG6DA7:DT242DC243_EE C 6 ? E 243 ? C 7 ? E 242 ? 1 A DA 7 1_555 C DT 6 1_555 A DT 8 1_555 C DA 5 1_555 0.454 -1.258 3.365 0.535 -0.729 31.739 -2.161 -0.728 3.399 -1.332 -0.978 31.752 7 CC_DA7DT8:DA241DT242_EE C 7 ? E 242 ? C 8 ? E 241 ? 1 A DT 8 1_555 C DA 5 1_555 A DA 9 1_555 C DT 4 1_555 -0.825 0.215 3.407 2.645 1.175 41.371 0.175 1.457 3.355 1.660 -3.739 41.467 8 CC_DT8DA9:DT240DA241_EE C 8 ? E 241 ? C 9 ? E 240 ? 1 A DA 9 1_555 C DT 4 1_555 A DG 10 1_555 C DC 3 1_555 0.436 -0.733 3.349 0.060 -1.766 33.850 -0.966 -0.737 3.382 -3.031 -0.104 33.894 9 CC_DA9DG10:DC239DT240_EE C 9 ? E 240 ? C 10 ? E 239 ? 1 A DG 10 1_555 C DC 3 1_555 A DT 11 1_555 C DA 2 1_555 -0.232 -0.616 3.078 3.042 1.397 31.142 -1.387 0.965 3.012 2.592 -5.646 31.317 10 CC_DG10DT11:DA238DC239_EE C 10 ? E 239 ? C 11 ? E 238 ? 1 A DT 11 1_555 C DA 2 1_555 A DG 12 1_555 C DC 1 1_555 0.403 -0.037 3.179 -10.984 2.888 35.517 -0.425 -2.026 2.919 4.591 17.464 37.233 11 CC_DT11DG12:DC237DA238_EE C 11 ? E 238 ? C 12 ? E 237 ? 1 A DG 12 1_555 C DC 1 1_555 A DG 13 1_555 B DC 12 1_555 -1.333 -1.461 3.318 3.115 7.098 24.052 -5.261 3.891 2.596 16.493 -7.238 25.252 12 CC_DG12DG13:DC136DC237_DE C 12 ? E 237 ? C 13 ? D 136 ? 1 A DG 13 1_555 B DC 12 1_555 A DG 14 1_555 B OMC 11 1_555 -0.006 -1.284 3.270 -4.944 21.491 34.629 -3.968 -0.481 2.134 32.368 7.447 40.872 13 CC_DG13DG14:OMC135DC136_DD C 13 ? D 136 ? C 14 ? D 135 ? 1 A DG 14 1_555 B OMC 11 1_555 A DG 15 1_555 B DC 10 1_555 0.149 -1.169 4.376 7.725 7.761 40.290 -2.716 0.860 4.053 11.023 -10.972 41.691 14 CC_DG14DG15:DC134OMC135_DD C 14 ? D 135 ? C 15 ? D 134 ? 1 A DG 15 1_555 B DC 10 1_555 A DT 16 1_555 B DA 9 1_555 -1.462 -0.954 2.899 -6.791 -0.106 22.001 -2.355 1.385 3.203 -0.269 17.273 23.013 15 CC_DG15DT16:DA133DC134_DD C 15 ? D 134 ? C 16 ? D 133 ? 1 A DT 16 1_555 B DA 9 1_555 A DC 17 1_555 B DG 8 1_555 0.707 -0.545 3.164 -0.083 12.253 28.086 -3.302 -1.355 2.694 23.862 0.162 30.594 16 CC_DT16DC17:DG132DA133_DD C 16 ? D 133 ? C 17 ? D 132 ? 1 A DC 17 1_555 B DG 8 1_555 A DG 18 1_555 B DC 7 1_555 -0.753 0.392 3.060 -3.973 5.995 28.698 -0.456 0.663 3.149 11.860 7.861 29.568 17 CC_DC17DG18:DC131DG132_DD C 17 ? D 132 ? C 18 ? D 131 ? 1 A DG 18 1_555 B DC 7 1_555 A DC 19 1_555 B DG 6 1_555 0.833 -0.253 3.152 6.499 4.768 34.020 -1.131 -0.422 3.188 8.011 -10.918 34.935 18 CC_DG18DC19:DG130DC131_DD C 18 ? D 131 ? C 19 ? D 130 ? 1 A DT 22 1_555 B DA 3 1_555 A DG 24 1_555 B DC 1 1_555 0.003 -2.550 6.505 -3.945 2.874 75.212 -2.258 -0.238 6.412 2.352 3.229 75.347 19 CC_DT22DG24:DC125DA127_DD C 22 ? D 127 ? C 24 ? D 125 ? 1 D DA 1 1_555 F DT 12 1_555 D DT 2 1_555 F DA 11 1_555 -2.134 0.195 3.379 -7.290 -2.037 50.561 0.378 1.930 3.624 -2.370 8.481 51.087 20 FF_DA1DT2:DA247DT248_HH F 1 ? H 248 ? F 2 ? H 247 ? 1 D DT 2 1_555 F DA 11 1_555 D DT 3 1_555 F DA 10 1_555 -0.209 -0.297 3.216 1.608 -5.506 29.656 0.538 0.725 3.203 -10.632 -3.105 30.193 21 FF_DT2DT3:DA246DA247_HH F 2 ? H 247 ? F 3 ? H 246 ? 1 D DT 3 1_555 F DA 10 1_555 D DC 4 1_555 F DG 9 1_555 0.287 -0.563 3.213 -6.056 2.664 44.070 -0.982 -0.920 3.112 3.526 8.017 44.540 22 FF_DT3DC4:DG245DA246_HH F 3 ? H 246 ? F 4 ? H 245 ? 1 D DC 4 1_555 F DG 9 1_555 D DG 6 1_555 F DC 7 1_555 0.116 0.037 6.544 0.273 0.058 82.715 0.025 -0.074 6.545 0.044 -0.207 82.715 23 FF_DC4DG6:DC243DG245_HH F 4 ? H 245 ? F 6 ? H 243 ? 1 D DG 6 1_555 F DC 7 1_555 D DA 7 1_555 F DT 6 1_555 0.338 -0.584 3.294 5.121 5.122 24.270 -2.821 0.715 3.111 11.850 -11.847 25.312 24 FF_DG6DA7:DT242DC243_HH F 6 ? H 243 ? F 7 ? H 242 ? 1 D DA 7 1_555 F DT 6 1_555 D DT 8 1_555 F DA 5 1_555 0.510 -0.710 2.937 -0.428 6.315 28.498 -2.612 -1.093 2.712 12.632 0.856 29.179 25 FF_DA7DT8:DA241DT242_HH F 7 ? H 242 ? F 8 ? H 241 ? 1 D DT 8 1_555 F DA 5 1_555 D DG 10 1_555 F DC 3 1_555 -0.003 0.935 6.873 -4.962 12.695 75.066 -0.042 -0.310 6.925 10.337 4.040 76.114 26 FF_DT8DG10:DC239DA241_HH F 8 ? H 241 ? F 10 ? H 239 ? 1 D DG 10 1_555 F DC 3 1_555 D DT 11 1_555 F DA 2 1_555 -0.212 -0.906 3.116 1.350 -2.122 24.524 -1.497 0.895 3.165 -4.979 -3.168 24.651 27 FF_DG10DT11:DA238DC239_HH F 10 ? H 239 ? F 11 ? H 238 ? 1 D DT 11 1_555 F DA 2 1_555 D DG 12 1_555 F DC 1 1_555 0.592 -0.645 3.210 -9.046 7.789 40.418 -1.661 -1.711 2.853 10.988 12.761 42.073 28 FF_DT11DG12:DC237DA238_HH F 11 ? H 238 ? F 12 ? H 237 ? 1 D DG 12 1_555 F DC 1 1_555 D DG 13 1_555 E DC 12 1_555 -1.541 -1.292 3.488 -1.500 -1.250 24.153 -2.647 3.153 3.637 -2.980 3.578 24.231 29 FF_DG12DG13:DC136DC237_GH F 12 ? H 237 ? F 13 ? G 136 ? 1 D DG 13 1_555 E DC 12 1_555 D DG 14 1_555 E OMC 11 1_555 -0.223 -1.298 3.137 -4.616 17.669 31.196 -4.279 -0.208 2.134 29.867 7.802 36.033 30 FF_DG13DG14:OMC135DC136_GG F 13 ? G 136 ? F 14 ? G 135 ? 1 D DG 14 1_555 E OMC 11 1_555 D DG 15 1_555 E DC 10 1_555 0.705 -1.357 4.100 6.962 9.833 41.983 -2.988 -0.127 3.770 13.396 -9.485 43.602 31 FF_DG14DG15:DC134OMC135_GG F 14 ? G 135 ? F 15 ? G 134 ? 1 D DG 15 1_555 E DC 10 1_555 D DT 16 1_555 E DA 9 1_555 -1.192 -0.814 3.004 -4.630 5.246 23.554 -3.415 1.478 2.933 12.503 11.034 24.557 32 FF_DG15DT16:DA133DC134_GG F 15 ? G 134 ? F 16 ? G 133 ? 1 D DT 16 1_555 E DA 9 1_555 D DC 17 1_555 E DG 8 1_555 0.300 -0.323 3.035 0.549 9.642 29.560 -2.296 -0.464 2.798 18.293 -1.042 31.064 33 FF_DT16DC17:DG132DA133_GG F 16 ? G 133 ? F 17 ? G 132 ? 1 D DC 17 1_555 E DG 8 1_555 D DG 18 1_555 E DC 7 1_555 -0.422 0.387 3.341 -3.011 13.119 27.178 -2.068 0.164 3.212 25.992 5.965 30.272 34 FF_DC17DG18:DC131DG132_GG F 17 ? G 132 ? F 18 ? G 131 ? 1 D DG 18 1_555 E DC 7 1_555 D DC 19 1_555 E DG 6 1_555 0.629 -0.019 3.110 2.061 6.112 31.465 -1.084 -0.784 3.085 11.124 -3.751 32.103 35 FF_DG18DC19:DG130DC131_GG F 18 ? G 131 ? F 19 ? G 130 ? 1 D DC 19 1_555 E DG 6 1_555 D DA 20 1_555 E DT 5 1_555 -0.488 0.263 3.439 -1.178 7.679 34.464 -0.775 0.620 3.431 12.761 1.958 35.303 36 FF_DC19DA20:DT129DG130_GG F 19 ? G 130 ? F 20 ? G 129 ? 1 D DA 20 1_555 E DT 5 1_555 D DA 21 1_555 E DT 4 1_555 0.335 -0.985 3.159 -1.732 2.607 32.875 -2.153 -0.869 3.053 4.593 3.052 33.019 37 FF_DA20DA21:DT128DT129_GG F 20 ? G 129 ? F 21 ? G 128 ? 1 D DA 21 1_555 E DT 4 1_555 D DT 22 1_555 E DA 3 1_555 0.197 -1.326 3.474 1.076 -1.930 37.289 -1.798 -0.156 3.540 -3.015 -1.681 37.352 38 FF_DA21DT22:DA127DT128_GG F 21 ? G 128 ? F 22 ? G 127 ? 1 D DT 22 1_555 E DA 3 1_555 D DG 24 1_555 E DC 1 1_555 -0.669 -1.227 6.654 -3.815 -1.804 73.053 -0.910 0.309 6.702 -1.514 3.202 73.157 39 FF_DT22DG24:DC125DA127_GG F 22 ? G 127 ? F 24 ? G 125 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 '2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL' BTB 6 'ADENOSINE MONOPHOSPHATE' AMP 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2HVR _pdbx_initial_refinement_model.details 'PDB ENTRY 2HVR' #