HEADER RNA BINDING PROTEIN 31-JUL-06 2HVZ TITLE SOLUTION STRUCTURE OF THE RRM DOMAIN OF SR RICH FACTOR 9G8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR, ARGININE/SERINE-RICH 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM (AMINO ACIDS K12-R98); COMPND 5 SYNONYM: SPLICING FACTOR 9G8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFRS7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21/RP; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24B KEYWDS RRM, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.M.TINTARU,G.M.HAUTBERGUE,A.P.GOLOVANOV,L.Y.LIAN,S.A.WILSON REVDAT 3 09-MAR-22 2HVZ 1 REMARK SEQADV REVDAT 2 24-FEB-09 2HVZ 1 VERSN REVDAT 1 21-NOV-06 2HVZ 0 JRNL AUTH Y.HARGOUS,G.M.HAUTBERGUE,A.M.TINTARU,L.SKRISOVSKA, JRNL AUTH 2 A.P.GOLOVANOV,J.STEVENIN,L.Y.LIAN,S.A.WILSON,F.H.ALLAIN JRNL TITL MOLECULAR BASIS OF RNA RECOGNITION AND TAP BINDING BY THE SR JRNL TITL 2 PROTEINS SRP20 AND 9G8. JRNL REF EMBO J. V. 25 5126 2006 JRNL REFN ISSN 0261-4189 JRNL PMID 17036044 JRNL DOI 10.1038/SJ.EMBOJ.7601385 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, AMBER 7.0 REMARK 3 AUTHORS : CASE DA, CHEATHAM TE 3RD, DARDEN T, GOHLKE H, LUO REMARK 3 R, MERZ KM JR, ONUFRIEV A, SIMMERLING C, WANG B, REMARK 3 WOODS RJ (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 1138 RESTRAINTS, 951 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 119 REMARK 3 DIHEDRAL ANGLE RESTRAINTS AND 68 DISTANCE RESTRAINTS FROM REMARK 3 HYDROGEN BONDS REMARK 4 REMARK 4 2HVZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038826. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NMR SAMPLE: 13C, 15N-9G8 RRM AT REMARK 210 0.6 MM BUFFER CONDITIONS: 20MM REMARK 210 CH3COONA (PH=5.5), 25MM L-ARG, REMARK 210 50MM L-GLU, 5MM EDTA, 10MM DTT; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 1.0, NMRVIEW 5.01, CYANA REMARK 210 2.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE 9G8 SEQUENCE STARTS AT K2 AND FINISHES AT R88, REMARK 210 CORRESPONDING TO K12 AND R98, RESPECTIVELY. ALL THE OTHER AMINO- REMARK 210 ACIDS ARE PART OF THE T7 AND HISTIDINE TAGS. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 7 63.63 63.97 REMARK 500 1 THR A 10 36.65 -175.93 REMARK 500 1 VAL A 61 162.87 -47.39 REMARK 500 1 SER A 79 -171.60 -67.76 REMARK 500 1 LYS A 89 -74.83 -94.74 REMARK 500 1 LEU A 90 98.22 59.62 REMARK 500 1 LEU A 91 -39.67 -165.74 REMARK 500 2 ASN A 7 72.62 63.81 REMARK 500 2 THR A 10 37.58 -175.99 REMARK 500 2 VAL A 61 155.54 -47.80 REMARK 500 2 ARG A 87 -56.59 -122.93 REMARK 500 2 ARG A 88 85.37 53.41 REMARK 500 2 LEU A 90 91.08 -169.37 REMARK 500 2 LEU A 94 132.47 -173.34 REMARK 500 2 PHE A 95 88.35 -155.09 REMARK 500 2 ASN A 96 45.25 -155.38 REMARK 500 3 ASN A 7 69.09 62.75 REMARK 500 3 THR A 10 36.15 -166.37 REMARK 500 3 THR A 29 115.57 -162.53 REMARK 500 3 VAL A 61 159.61 -48.99 REMARK 500 3 SER A 79 -179.14 -68.02 REMARK 500 3 ARG A 80 49.41 -82.52 REMARK 500 3 ARG A 88 -178.74 57.40 REMARK 500 3 LYS A 89 160.60 63.36 REMARK 500 3 LEU A 90 76.92 -166.86 REMARK 500 3 ASN A 96 26.08 -152.60 REMARK 500 4 ASN A 7 73.27 64.92 REMARK 500 4 THR A 10 40.10 -93.30 REMARK 500 4 LYS A 60 -157.56 -133.62 REMARK 500 4 ARG A 88 -177.85 56.91 REMARK 500 4 LEU A 91 -53.51 -164.80 REMARK 500 5 ASN A 7 66.77 62.14 REMARK 500 5 VAL A 61 151.69 -48.49 REMARK 500 5 ARG A 66 48.88 -87.39 REMARK 500 5 VAL A 67 173.26 -59.80 REMARK 500 5 ARG A 87 24.54 -159.79 REMARK 500 5 ARG A 88 -176.64 55.83 REMARK 500 5 LYS A 89 -75.31 -55.21 REMARK 500 5 LEU A 90 87.99 51.84 REMARK 500 5 LEU A 91 -35.10 -178.59 REMARK 500 5 LEU A 94 137.82 -179.35 REMARK 500 5 ASN A 96 26.32 -162.40 REMARK 500 6 ASN A 7 70.60 63.28 REMARK 500 6 LEU A 8 67.35 -115.09 REMARK 500 6 THR A 10 25.06 -160.86 REMARK 500 6 VAL A 61 151.60 -48.36 REMARK 500 6 ALA A 86 83.85 -69.80 REMARK 500 6 LEU A 91 -55.56 -158.23 REMARK 500 7 LYS A 60 -155.81 -132.92 REMARK 500 7 ARG A 88 96.06 58.29 REMARK 500 REMARK 500 THIS ENTRY HAS 157 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2HVZ A 2 88 UNP Q16629 SFRS7_HUMAN 12 98 SEQADV 2HVZ MET A 1 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LYS A 89 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 90 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 91 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLU A 92 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ VAL A 93 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 94 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ PHE A 95 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ ASN A 96 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLY A 97 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ PRO A 98 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 99 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLU A 100 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ HIS A 101 UNP Q16629 CLONING ARTIFACT SEQRES 1 A 101 MET LYS VAL TYR VAL GLY ASN LEU GLY THR GLY ALA GLY SEQRES 2 A 101 LYS GLY GLU LEU GLU ARG ALA PHE SER TYR TYR GLY PRO SEQRES 3 A 101 LEU ARG THR VAL TRP ILE ALA ARG ASN PRO PRO GLY PHE SEQRES 4 A 101 ALA PHE VAL GLU PHE GLU ASP PRO ARG ASP ALA GLU ASP SEQRES 5 A 101 ALA VAL ARG GLY LEU ASP GLY LYS VAL ILE CYS GLY SER SEQRES 6 A 101 ARG VAL ARG VAL GLU LEU SER THR GLY MET PRO ARG ARG SEQRES 7 A 101 SER ARG PHE ASP ARG PRO PRO ALA ARG ARG LYS LEU LEU SEQRES 8 A 101 GLU VAL LEU PHE ASN GLY PRO LEU GLU HIS HELIX 1 1 GLY A 13 GLY A 25 1 13 HELIX 2 2 ASP A 46 LYS A 60 1 15 SHEET 1 A 4 THR A 29 ALA A 33 0 SHEET 2 A 4 PHE A 39 GLU A 43 -1 O GLU A 43 N THR A 29 SHEET 3 A 4 LYS A 2 GLY A 6 -1 N VAL A 3 O VAL A 42 SHEET 4 A 4 ARG A 68 LEU A 71 -1 O ARG A 68 N GLY A 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1