data_2HYK # _entry.id 2HYK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2HYK RCSB RCSB038913 WWPDB D_1000038913 # _pdbx_database_status.entry_id 2HYK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2006-08-07 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fibriansah, G.' 1 'Nakamura, S.' 2 'Kumasaka, T.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;The 1.3 A crystal structure of a novel endo-beta-1,3-glucanase of glycoside hydrolase family 16 from alkaliphilic Nocardiopsis sp. strain F96. ; Proteins 69 683 690 2007 PSFGEY US 0887-3585 0867 ? 17879342 10.1002/prot.21589 1 ;Crystallization and preliminary crystallographic analysis of endo-beta-1,3-beta-glucanase from alkaliphilic Nocardiopsis sp. strain F96 ; 'Acta Crystallogr.,Sect.F' 62 20 22 2006 ? DK 1744-3091 ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fibriansah, G.' 1 primary 'Masuda, S.' 2 primary 'Koizumi, N.' 3 primary 'Nakamura, S.' 4 primary 'Kumasaka, T.' 5 1 'Fibriansah, G.' 6 1 'Masuda, S.' 7 1 'Hirose, R.' 8 1 'Hamada, K.' 9 1 'Tanaka, N.' 10 1 'Nakamura, S.' 11 1 'Kumasaka, T.' 12 # _cell.entry_id 2HYK _cell.length_a 34.589 _cell.length_b 71.843 _cell.length_c 39.666 _cell.angle_alpha 90.00 _cell.angle_beta 90.21 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HYK _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-1,3-glucanase 27127.404 1 3.2.1.39 ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn ETHANOL 46.068 2 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 6 water nat water 18.015 217 ? ? ? ? # _entity_name_sys.entity_id 1 _entity_name_sys.name endo-beta-1,3-glucanase # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TESDMRATLVWSDEFDGPAGSAPDPANWNHETGDHGWGNNELQNYTDSRANSALDGNGNLVITARQEADGGYTSARLTTQ NKVQPQYGRVEASIQIPRGQGIWPAFWMLGADFPNTPWPDSGEIDIMENIGREPHLVHGSLHGPGYFGGEPLTGSYMHPQ GWSFADTFHTFAVDWRPGSITWSVDGVAYQTYTSADTRGNPWVFDQPFFMILNVAVGGDWPGYPDGSTQFPQEMRVDYVR VYELG ; _entity_poly.pdbx_seq_one_letter_code_can ;TESDMRATLVWSDEFDGPAGSAPDPANWNHETGDHGWGNNELQNYTDSRANSALDGNGNLVITARQEADGGYTSARLTTQ NKVQPQYGRVEASIQIPRGQGIWPAFWMLGADFPNTPWPDSGEIDIMENIGREPHLVHGSLHGPGYFGGEPLTGSYMHPQ GWSFADTFHTFAVDWRPGSITWSVDGVAYQTYTSADTRGNPWVFDQPFFMILNVAVGGDWPGYPDGSTQFPQEMRVDYVR VYELG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLU n 1 3 SER n 1 4 ASP n 1 5 MET n 1 6 ARG n 1 7 ALA n 1 8 THR n 1 9 LEU n 1 10 VAL n 1 11 TRP n 1 12 SER n 1 13 ASP n 1 14 GLU n 1 15 PHE n 1 16 ASP n 1 17 GLY n 1 18 PRO n 1 19 ALA n 1 20 GLY n 1 21 SER n 1 22 ALA n 1 23 PRO n 1 24 ASP n 1 25 PRO n 1 26 ALA n 1 27 ASN n 1 28 TRP n 1 29 ASN n 1 30 HIS n 1 31 GLU n 1 32 THR n 1 33 GLY n 1 34 ASP n 1 35 HIS n 1 36 GLY n 1 37 TRP n 1 38 GLY n 1 39 ASN n 1 40 ASN n 1 41 GLU n 1 42 LEU n 1 43 GLN n 1 44 ASN n 1 45 TYR n 1 46 THR n 1 47 ASP n 1 48 SER n 1 49 ARG n 1 50 ALA n 1 51 ASN n 1 52 SER n 1 53 ALA n 1 54 LEU n 1 55 ASP n 1 56 GLY n 1 57 ASN n 1 58 GLY n 1 59 ASN n 1 60 LEU n 1 61 VAL n 1 62 ILE n 1 63 THR n 1 64 ALA n 1 65 ARG n 1 66 GLN n 1 67 GLU n 1 68 ALA n 1 69 ASP n 1 70 GLY n 1 71 GLY n 1 72 TYR n 1 73 THR n 1 74 SER n 1 75 ALA n 1 76 ARG n 1 77 LEU n 1 78 THR n 1 79 THR n 1 80 GLN n 1 81 ASN n 1 82 LYS n 1 83 VAL n 1 84 GLN n 1 85 PRO n 1 86 GLN n 1 87 TYR n 1 88 GLY n 1 89 ARG n 1 90 VAL n 1 91 GLU n 1 92 ALA n 1 93 SER n 1 94 ILE n 1 95 GLN n 1 96 ILE n 1 97 PRO n 1 98 ARG n 1 99 GLY n 1 100 GLN n 1 101 GLY n 1 102 ILE n 1 103 TRP n 1 104 PRO n 1 105 ALA n 1 106 PHE n 1 107 TRP n 1 108 MET n 1 109 LEU n 1 110 GLY n 1 111 ALA n 1 112 ASP n 1 113 PHE n 1 114 PRO n 1 115 ASN n 1 116 THR n 1 117 PRO n 1 118 TRP n 1 119 PRO n 1 120 ASP n 1 121 SER n 1 122 GLY n 1 123 GLU n 1 124 ILE n 1 125 ASP n 1 126 ILE n 1 127 MET n 1 128 GLU n 1 129 ASN n 1 130 ILE n 1 131 GLY n 1 132 ARG n 1 133 GLU n 1 134 PRO n 1 135 HIS n 1 136 LEU n 1 137 VAL n 1 138 HIS n 1 139 GLY n 1 140 SER n 1 141 LEU n 1 142 HIS n 1 143 GLY n 1 144 PRO n 1 145 GLY n 1 146 TYR n 1 147 PHE n 1 148 GLY n 1 149 GLY n 1 150 GLU n 1 151 PRO n 1 152 LEU n 1 153 THR n 1 154 GLY n 1 155 SER n 1 156 TYR n 1 157 MET n 1 158 HIS n 1 159 PRO n 1 160 GLN n 1 161 GLY n 1 162 TRP n 1 163 SER n 1 164 PHE n 1 165 ALA n 1 166 ASP n 1 167 THR n 1 168 PHE n 1 169 HIS n 1 170 THR n 1 171 PHE n 1 172 ALA n 1 173 VAL n 1 174 ASP n 1 175 TRP n 1 176 ARG n 1 177 PRO n 1 178 GLY n 1 179 SER n 1 180 ILE n 1 181 THR n 1 182 TRP n 1 183 SER n 1 184 VAL n 1 185 ASP n 1 186 GLY n 1 187 VAL n 1 188 ALA n 1 189 TYR n 1 190 GLN n 1 191 THR n 1 192 TYR n 1 193 THR n 1 194 SER n 1 195 ALA n 1 196 ASP n 1 197 THR n 1 198 ARG n 1 199 GLY n 1 200 ASN n 1 201 PRO n 1 202 TRP n 1 203 VAL n 1 204 PHE n 1 205 ASP n 1 206 GLN n 1 207 PRO n 1 208 PHE n 1 209 PHE n 1 210 MET n 1 211 ILE n 1 212 LEU n 1 213 ASN n 1 214 VAL n 1 215 ALA n 1 216 VAL n 1 217 GLY n 1 218 GLY n 1 219 ASP n 1 220 TRP n 1 221 PRO n 1 222 GLY n 1 223 TYR n 1 224 PRO n 1 225 ASP n 1 226 GLY n 1 227 SER n 1 228 THR n 1 229 GLN n 1 230 PHE n 1 231 PRO n 1 232 GLN n 1 233 GLU n 1 234 MET n 1 235 ARG n 1 236 VAL n 1 237 ASP n 1 238 TYR n 1 239 VAL n 1 240 ARG n 1 241 VAL n 1 242 TYR n 1 243 GLU n 1 244 LEU n 1 245 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Nocardiopsis _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain F96 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nocardiopsis sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 221582 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET-21b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2V0H0_9ACTO _struct_ref.pdbx_db_accession Q2V0H0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TESDMRATLVWSDEFDGPAGSAPDPANWNHETGDHGWGNNELQNYTDSRANSALDGNGNLVITARQEADGGYTSARLTTQ NKVQPQYGRVEASIQIPRGQGIWPAFWMLGADFPNTPWPDSGEIDIMENIGREPHLVHGSLHGPGYFGGEPLTGSYMHPQ GWSFADTFHTFAVDWRPGSITWSVDGVAYQTYTSADTRGNPWVFDQPFFMILNVAVGGDWPGYPDGSTQFPQEMRVDYVR VYELG ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HYK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2V0H0 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 270 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 245 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2HYK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.82 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 31.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Tris-HCl pH 8.0, 1.3-1.4M Ammonium sulfate, 1% Ethanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2004-11-01 _diffrn_detector.details 'rhodium-coated mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'rotated-inclined double-crystal monochromator' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU # _reflns.entry_id 2HYK _reflns.d_resolution_high 1.300 _reflns.d_resolution_low 50.000 _reflns.number_obs 47558 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_netI_over_sigmaI 14.200 _reflns.pdbx_chi_squared 1.766 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.35 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.157 _reflns_shell.pdbx_redundancy 4.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4574 _reflns_shell.percent_possible_all 95.70 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HYK _refine.ls_d_res_high 1.300 _refine.ls_d_res_low 39.650 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.080 _refine.ls_number_reflns_obs 47531 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_all 0.144 _refine.ls_R_factor_R_work 0.143 _refine.ls_R_factor_R_free 0.162 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2405 _refine.B_iso_mean 9.249 _refine.aniso_B[1][1] -0.190 _refine.aniso_B[2][2] -0.550 _refine.aniso_B[3][3] 0.740 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.270 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.pdbx_overall_ESU_R 0.055 _refine.pdbx_overall_ESU_R_Free 0.047 _refine.overall_SU_ML 0.027 _refine.overall_SU_B 1.352 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.144 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1859 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 217 _refine_hist.number_atoms_total 2106 _refine_hist.d_res_high 1.300 _refine_hist.d_res_low 39.650 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1984 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2712 1.250 1.912 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 236 7.084 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 108 34.867 24.167 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 261 10.327 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 19.269 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 265 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1617 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 912 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1326 0.309 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 181 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 5 0.072 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 38 0.133 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 29 0.119 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1212 0.627 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1910 0.921 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 919 1.337 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 802 1.804 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2131 0.759 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 226 2.909 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1922 1.154 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.297 _refine_ls_shell.d_res_low 1.331 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.580 _refine_ls_shell.number_reflns_R_work 3105 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.184 _refine_ls_shell.R_factor_R_free 0.212 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 178 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 3283 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HYK _struct.title 'The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96' _struct.pdbx_descriptor 'Beta-1,3-glucanase (E.C.3.2.1.39)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HYK _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'family 16, beta-jelly roll, bacterial endo-beta-1, 3-glucanase, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 163 ? THR A 167 ? SER A 163 THR A 167 5 ? 5 HELX_P HELX_P2 2 ALA A 195 ? THR A 197 ? ALA A 195 THR A 197 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A GLU 14 O ? ? ? 1_555 C CA . CA ? ? A GLU 14 A CA 477 1_555 ? ? ? ? ? ? ? 2.349 ? metalc2 metalc ? ? A GLY 58 O ? ? ? 1_555 C CA . CA ? ? A GLY 58 A CA 477 1_555 ? ? ? ? ? ? ? 2.330 ? metalc3 metalc ? ? A ASP 237 O ? ? ? 1_555 C CA . CA ? ? A ASP 237 A CA 477 1_555 ? ? ? ? ? ? ? 2.375 ? metalc4 metalc ? ? A ASP 237 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 237 A CA 477 1_555 ? ? ? ? ? ? ? 2.339 ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 477 A HOH 537 1_555 ? ? ? ? ? ? ? 2.468 ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 477 A HOH 601 1_555 ? ? ? ? ? ? ? 2.462 ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 477 A HOH 510 1_555 ? ? ? ? ? ? ? 2.353 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 113 A . ? PHE 113 A PRO 114 A ? PRO 114 A 1 -1.34 2 TRP 118 A . ? TRP 118 A PRO 119 A ? PRO 119 A 1 2.86 3 PHE 230 A . ? PHE 230 A PRO 231 A ? PRO 231 A 1 0.23 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 8 ? ASP A 13 ? THR A 8 ASP A 13 A 2 GLN A 232 ? GLU A 243 ? GLN A 232 GLU A 243 A 3 LEU A 60 ? GLN A 66 ? LEU A 60 GLN A 66 A 4 SER A 52 ? LEU A 54 ? SER A 52 LEU A 54 B 1 ASN A 44 ? TYR A 45 ? ASN A 44 TYR A 45 B 2 TYR A 72 ? SER A 74 ? TYR A 72 SER A 74 B 3 LEU A 60 ? GLN A 66 ? LEU A 60 GLN A 66 B 4 GLN A 232 ? GLU A 243 ? GLN A 232 GLU A 243 B 5 GLY A 88 ? GLN A 95 ? GLY A 88 GLN A 95 B 6 HIS A 169 ? ARG A 176 ? HIS A 169 ARG A 176 B 7 SER A 179 ? VAL A 184 ? SER A 179 VAL A 184 B 8 VAL A 187 ? THR A 193 ? VAL A 187 THR A 193 C 1 ASN A 29 ? GLU A 31 ? ASN A 29 GLU A 31 C 2 ARG A 76 ? THR A 78 ? ARG A 76 THR A 78 C 3 PHE A 208 ? VAL A 216 ? PHE A 208 VAL A 216 C 4 ILE A 102 ? GLY A 110 ? ILE A 102 GLY A 110 C 5 GLU A 123 ? GLU A 128 ? GLU A 123 GLU A 128 C 6 LEU A 136 ? HIS A 142 ? LEU A 136 HIS A 142 C 7 LEU A 152 ? MET A 157 ? LEU A 152 MET A 157 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 11 ? N TRP A 11 O VAL A 241 ? O VAL A 241 A 2 3 O GLN A 232 ? O GLN A 232 N ALA A 64 ? N ALA A 64 A 3 4 O VAL A 61 ? O VAL A 61 N ALA A 53 ? N ALA A 53 B 1 2 N ASN A 44 ? N ASN A 44 O TYR A 72 ? O TYR A 72 B 2 3 O THR A 73 ? O THR A 73 N ARG A 65 ? N ARG A 65 B 3 4 N ALA A 64 ? N ALA A 64 O GLN A 232 ? O GLN A 232 B 4 5 O ARG A 235 ? O ARG A 235 N GLN A 95 ? N GLN A 95 B 5 6 N GLY A 88 ? N GLY A 88 O TRP A 175 ? O TRP A 175 B 6 7 N ARG A 176 ? N ARG A 176 O SER A 179 ? O SER A 179 B 7 8 N ILE A 180 ? N ILE A 180 O TYR A 192 ? O TYR A 192 C 1 2 N GLU A 31 ? N GLU A 31 O ARG A 76 ? O ARG A 76 C 2 3 N LEU A 77 ? N LEU A 77 O LEU A 212 ? O LEU A 212 C 3 4 O ILE A 211 ? O ILE A 211 N TRP A 107 ? N TRP A 107 C 4 5 N PHE A 106 ? N PHE A 106 O MET A 127 ? O MET A 127 C 5 6 N ASP A 125 ? N ASP A 125 O SER A 140 ? O SER A 140 C 6 7 N LEU A 141 ? N LEU A 141 O LEU A 152 ? O LEU A 152 # _atom_sites.entry_id 2HYK _atom_sites.fract_transf_matrix[1][1] 0.028911 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000106 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013919 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025211 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 ASP 4 4 ? ? ? A . n A 1 5 MET 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 TRP 37 37 37 TRP TRP A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 TRP 118 118 118 TRP TRP A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ASP 125 125 125 ASP ASP A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 MET 127 127 127 MET MET A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 HIS 142 142 142 HIS HIS A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 TYR 156 156 156 TYR TYR A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 HIS 169 169 169 HIS HIS A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 TRP 175 175 175 TRP TRP A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 ASN 200 200 200 ASN ASN A . n A 1 201 PRO 201 201 201 PRO PRO A . n A 1 202 TRP 202 202 202 TRP TRP A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 PHE 204 204 204 PHE PHE A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 GLN 206 206 206 GLN GLN A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 MET 210 210 210 MET MET A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 ASN 213 213 213 ASN ASN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 TRP 220 220 220 TRP TRP A . n A 1 221 PRO 221 221 221 PRO PRO A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 ASP 225 225 225 ASP ASP A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 GLN 229 229 229 GLN GLN A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 GLN 232 232 232 GLN GLN A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 MET 234 234 234 MET MET A . n A 1 235 ARG 235 235 235 ARG ARG A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 VAL 241 241 241 VAL VAL A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 LEU 244 244 ? ? ? A . n A 1 245 GLY 245 245 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 251 251 SO4 SO4 A . C 3 CA 1 477 477 CA CA A . D 4 EOH 1 246 246 EOH EOH A . E 4 EOH 1 247 247 EOH EOH A . F 5 GOL 1 248 248 GOL GOL A . G 5 GOL 1 249 249 GOL GOL A . H 5 GOL 1 250 250 GOL GOL A . I 6 HOH 1 478 252 HOH HOH A . I 6 HOH 2 479 253 HOH HOH A . I 6 HOH 3 480 254 HOH HOH A . I 6 HOH 4 481 255 HOH HOH A . I 6 HOH 5 482 256 HOH HOH A . I 6 HOH 6 483 257 HOH HOH A . I 6 HOH 7 484 258 HOH HOH A . I 6 HOH 8 485 259 HOH HOH A . I 6 HOH 9 486 260 HOH HOH A . I 6 HOH 10 487 261 HOH HOH A . I 6 HOH 11 488 262 HOH HOH A . I 6 HOH 12 489 263 HOH HOH A . I 6 HOH 13 490 264 HOH HOH A . I 6 HOH 14 491 265 HOH HOH A . I 6 HOH 15 492 266 HOH HOH A . I 6 HOH 16 493 267 HOH HOH A . I 6 HOH 17 494 268 HOH HOH A . I 6 HOH 18 495 269 HOH HOH A . I 6 HOH 19 496 270 HOH HOH A . I 6 HOH 20 497 271 HOH HOH A . I 6 HOH 21 498 272 HOH HOH A . I 6 HOH 22 499 273 HOH HOH A . I 6 HOH 23 500 274 HOH HOH A . I 6 HOH 24 501 275 HOH HOH A . I 6 HOH 25 502 276 HOH HOH A . I 6 HOH 26 503 277 HOH HOH A . I 6 HOH 27 504 278 HOH HOH A . I 6 HOH 28 505 279 HOH HOH A . I 6 HOH 29 506 280 HOH HOH A . I 6 HOH 30 507 281 HOH HOH A . I 6 HOH 31 508 282 HOH HOH A . I 6 HOH 32 509 283 HOH HOH A . I 6 HOH 33 510 284 HOH HOH A . I 6 HOH 34 511 285 HOH HOH A . I 6 HOH 35 512 286 HOH HOH A . I 6 HOH 36 513 287 HOH HOH A . I 6 HOH 37 514 288 HOH HOH A . I 6 HOH 38 515 289 HOH HOH A . I 6 HOH 39 516 290 HOH HOH A . I 6 HOH 40 517 291 HOH HOH A . I 6 HOH 41 518 292 HOH HOH A . I 6 HOH 42 519 293 HOH HOH A . I 6 HOH 43 520 294 HOH HOH A . I 6 HOH 44 521 295 HOH HOH A . I 6 HOH 45 522 296 HOH HOH A . I 6 HOH 46 523 297 HOH HOH A . I 6 HOH 47 524 298 HOH HOH A . I 6 HOH 48 525 299 HOH HOH A . I 6 HOH 49 526 300 HOH HOH A . I 6 HOH 50 527 301 HOH HOH A . I 6 HOH 51 528 302 HOH HOH A . I 6 HOH 52 529 303 HOH HOH A . I 6 HOH 53 530 304 HOH HOH A . I 6 HOH 54 531 305 HOH HOH A . I 6 HOH 55 532 306 HOH HOH A . I 6 HOH 56 533 307 HOH HOH A . I 6 HOH 57 534 308 HOH HOH A . I 6 HOH 58 535 309 HOH HOH A . I 6 HOH 59 536 310 HOH HOH A . I 6 HOH 60 537 311 HOH HOH A . I 6 HOH 61 538 312 HOH HOH A . I 6 HOH 62 539 313 HOH HOH A . I 6 HOH 63 540 314 HOH HOH A . I 6 HOH 64 541 315 HOH HOH A . I 6 HOH 65 542 316 HOH HOH A . I 6 HOH 66 543 317 HOH HOH A . I 6 HOH 67 544 318 HOH HOH A . I 6 HOH 68 545 319 HOH HOH A . I 6 HOH 69 546 320 HOH HOH A . I 6 HOH 70 547 321 HOH HOH A . I 6 HOH 71 548 322 HOH HOH A . I 6 HOH 72 549 323 HOH HOH A . I 6 HOH 73 550 324 HOH HOH A . I 6 HOH 74 551 325 HOH HOH A . I 6 HOH 75 552 326 HOH HOH A . I 6 HOH 76 553 327 HOH HOH A . I 6 HOH 77 554 328 HOH HOH A . I 6 HOH 78 555 329 HOH HOH A . I 6 HOH 79 556 330 HOH HOH A . I 6 HOH 80 557 331 HOH HOH A . I 6 HOH 81 558 332 HOH HOH A . I 6 HOH 82 559 333 HOH HOH A . I 6 HOH 83 560 334 HOH HOH A . I 6 HOH 84 561 335 HOH HOH A . I 6 HOH 85 562 336 HOH HOH A . I 6 HOH 86 563 337 HOH HOH A . I 6 HOH 87 564 338 HOH HOH A . I 6 HOH 88 565 339 HOH HOH A . I 6 HOH 89 566 340 HOH HOH A . I 6 HOH 90 567 341 HOH HOH A . I 6 HOH 91 568 342 HOH HOH A . I 6 HOH 92 569 343 HOH HOH A . I 6 HOH 93 570 344 HOH HOH A . I 6 HOH 94 571 345 HOH HOH A . I 6 HOH 95 572 346 HOH HOH A . I 6 HOH 96 573 347 HOH HOH A . I 6 HOH 97 574 348 HOH HOH A . I 6 HOH 98 575 349 HOH HOH A . I 6 HOH 99 576 350 HOH HOH A . I 6 HOH 100 577 351 HOH HOH A . I 6 HOH 101 578 352 HOH HOH A . I 6 HOH 102 579 353 HOH HOH A . I 6 HOH 103 580 354 HOH HOH A . I 6 HOH 104 581 355 HOH HOH A . I 6 HOH 105 582 356 HOH HOH A . I 6 HOH 106 583 357 HOH HOH A . I 6 HOH 107 584 358 HOH HOH A . I 6 HOH 108 585 359 HOH HOH A . I 6 HOH 109 586 360 HOH HOH A . I 6 HOH 110 587 361 HOH HOH A . I 6 HOH 111 588 362 HOH HOH A . I 6 HOH 112 589 363 HOH HOH A . I 6 HOH 113 590 364 HOH HOH A . I 6 HOH 114 591 365 HOH HOH A . I 6 HOH 115 592 366 HOH HOH A . I 6 HOH 116 593 367 HOH HOH A . I 6 HOH 117 594 368 HOH HOH A . I 6 HOH 118 595 369 HOH HOH A . I 6 HOH 119 596 370 HOH HOH A . I 6 HOH 120 597 371 HOH HOH A . I 6 HOH 121 598 372 HOH HOH A . I 6 HOH 122 599 373 HOH HOH A . I 6 HOH 123 600 374 HOH HOH A . I 6 HOH 124 601 375 HOH HOH A . I 6 HOH 125 602 376 HOH HOH A . I 6 HOH 126 603 377 HOH HOH A . I 6 HOH 127 604 378 HOH HOH A . I 6 HOH 128 605 379 HOH HOH A . I 6 HOH 129 606 380 HOH HOH A . I 6 HOH 130 607 381 HOH HOH A . I 6 HOH 131 608 382 HOH HOH A . I 6 HOH 132 609 383 HOH HOH A . I 6 HOH 133 610 384 HOH HOH A . I 6 HOH 134 611 385 HOH HOH A . I 6 HOH 135 612 386 HOH HOH A . I 6 HOH 136 613 387 HOH HOH A . I 6 HOH 137 614 389 HOH HOH A . I 6 HOH 138 615 390 HOH HOH A . I 6 HOH 139 616 391 HOH HOH A . I 6 HOH 140 617 392 HOH HOH A . I 6 HOH 141 618 393 HOH HOH A . I 6 HOH 142 619 394 HOH HOH A . I 6 HOH 143 620 395 HOH HOH A . I 6 HOH 144 621 396 HOH HOH A . I 6 HOH 145 622 397 HOH HOH A . I 6 HOH 146 623 398 HOH HOH A . I 6 HOH 147 624 399 HOH HOH A . I 6 HOH 148 625 400 HOH HOH A . I 6 HOH 149 626 401 HOH HOH A . I 6 HOH 150 627 402 HOH HOH A . I 6 HOH 151 628 403 HOH HOH A . I 6 HOH 152 629 404 HOH HOH A . I 6 HOH 153 630 405 HOH HOH A . I 6 HOH 154 631 406 HOH HOH A . I 6 HOH 155 632 407 HOH HOH A . I 6 HOH 156 633 408 HOH HOH A . I 6 HOH 157 634 409 HOH HOH A . I 6 HOH 158 635 410 HOH HOH A . I 6 HOH 159 636 411 HOH HOH A . I 6 HOH 160 637 412 HOH HOH A . I 6 HOH 161 638 413 HOH HOH A . I 6 HOH 162 639 414 HOH HOH A . I 6 HOH 163 640 415 HOH HOH A . I 6 HOH 164 641 416 HOH HOH A . I 6 HOH 165 642 417 HOH HOH A . I 6 HOH 166 643 418 HOH HOH A . I 6 HOH 167 644 419 HOH HOH A . I 6 HOH 168 645 420 HOH HOH A . I 6 HOH 169 646 421 HOH HOH A . I 6 HOH 170 647 422 HOH HOH A . I 6 HOH 171 648 423 HOH HOH A . I 6 HOH 172 649 424 HOH HOH A . I 6 HOH 173 650 425 HOH HOH A . I 6 HOH 174 651 426 HOH HOH A . I 6 HOH 175 652 427 HOH HOH A . I 6 HOH 176 653 428 HOH HOH A . I 6 HOH 177 654 429 HOH HOH A . I 6 HOH 178 655 430 HOH HOH A . I 6 HOH 179 656 431 HOH HOH A . I 6 HOH 180 657 432 HOH HOH A . I 6 HOH 181 658 433 HOH HOH A . I 6 HOH 182 659 435 HOH HOH A . I 6 HOH 183 660 436 HOH HOH A . I 6 HOH 184 661 437 HOH HOH A . I 6 HOH 185 662 438 HOH HOH A . I 6 HOH 186 663 439 HOH HOH A . I 6 HOH 187 664 440 HOH HOH A . I 6 HOH 188 665 441 HOH HOH A . I 6 HOH 189 666 442 HOH HOH A . I 6 HOH 190 667 443 HOH HOH A . I 6 HOH 191 668 444 HOH HOH A . I 6 HOH 192 669 445 HOH HOH A . I 6 HOH 193 670 446 HOH HOH A . I 6 HOH 194 671 447 HOH HOH A . I 6 HOH 195 672 448 HOH HOH A . I 6 HOH 196 673 449 HOH HOH A . I 6 HOH 197 674 450 HOH HOH A . I 6 HOH 198 675 451 HOH HOH A . I 6 HOH 199 676 452 HOH HOH A . I 6 HOH 200 677 453 HOH HOH A . I 6 HOH 201 678 454 HOH HOH A . I 6 HOH 202 679 455 HOH HOH A . I 6 HOH 203 680 456 HOH HOH A . I 6 HOH 204 681 457 HOH HOH A . I 6 HOH 205 682 458 HOH HOH A . I 6 HOH 206 683 459 HOH HOH A . I 6 HOH 207 684 461 HOH HOH A . I 6 HOH 208 685 463 HOH HOH A . I 6 HOH 209 686 465 HOH HOH A . I 6 HOH 210 687 466 HOH HOH A . I 6 HOH 211 688 469 HOH HOH A . I 6 HOH 212 689 470 HOH HOH A . I 6 HOH 213 690 471 HOH HOH A . I 6 HOH 214 691 472 HOH HOH A . I 6 HOH 215 692 473 HOH HOH A . I 6 HOH 216 693 475 HOH HOH A . I 6 HOH 217 694 476 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? A GLY 58 ? A GLY 58 ? 1_555 87.5 ? 2 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? A ASP 237 ? A ASP 237 ? 1_555 79.2 ? 3 O ? A GLY 58 ? A GLY 58 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? A ASP 237 ? A ASP 237 ? 1_555 87.4 ? 4 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 154.4 ? 5 O ? A GLY 58 ? A GLY 58 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 88.0 ? 6 O ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 75.4 ? 7 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 537 ? 1_555 69.9 ? 8 O ? A GLY 58 ? A GLY 58 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 537 ? 1_555 94.2 ? 9 O ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 537 ? 1_555 148.9 ? 10 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 537 ? 1_555 135.6 ? 11 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 601 ? 1_555 136.9 ? 12 O ? A GLY 58 ? A GLY 58 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 601 ? 1_555 94.7 ? 13 O ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 601 ? 1_555 143.8 ? 14 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 601 ? 1_555 68.6 ? 15 O ? I HOH . ? A HOH 537 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 601 ? 1_555 67.0 ? 16 O ? A GLU 14 ? A GLU 14 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 96.0 ? 17 O ? A GLY 58 ? A GLY 58 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 175.2 ? 18 O ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 90.0 ? 19 OD1 ? A ASP 237 ? A ASP 237 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 87.5 ? 20 O ? I HOH . ? A HOH 537 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 90.1 ? 21 O ? I HOH . ? A HOH 601 ? 1_555 CA ? C CA . ? A CA 477 ? 1_555 O ? I HOH . ? A HOH 510 ? 1_555 85.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.600 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 25958 _diffrn_reflns.pdbx_Rmerge_I_obs 0.090 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.78 _diffrn_reflns.av_sigmaI_over_netI 11.10 _diffrn_reflns.pdbx_redundancy 6.40 _diffrn_reflns.pdbx_percent_possible_obs 99.50 _diffrn_reflns.number 166200 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.45 50.00 ? ? 0.064 ? 5.452 6.60 99.60 1 2.74 3.45 ? ? 0.071 ? 3.184 6.90 99.90 1 2.39 2.74 ? ? 0.087 ? 2.061 7.00 100.00 1 2.17 2.39 ? ? 0.096 ? 1.557 6.90 100.00 1 2.02 2.17 ? ? 0.101 ? 1.233 6.90 100.00 1 1.90 2.02 ? ? 0.125 ? 0.941 7.30 100.00 1 1.80 1.90 ? ? 0.167 ? 0.693 6.50 100.00 1 1.72 1.80 ? ? 0.204 ? 0.605 6.60 100.00 1 1.66 1.72 ? ? 0.234 ? 0.573 5.50 99.80 1 1.60 1.66 ? ? 0.234 ? 0.487 3.60 95.40 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.fract_x _pdbx_phasing_MAD_set_site.fract_y _pdbx_phasing_MAD_set_site.fract_z _pdbx_phasing_MAD_set_site.b_iso 1 Se 0.642 0.624 0.995 0.257 9.116 2 Se 1.027 0.540 0.820 0.364 14.718 3 Se 0.777 0.540 0.969 0.150 11.526 4 Se 0.580 0.607 0.258 0.300 5.408 5 Se 0.658 0.539 0.794 0.215 9.689 6 Se 0.423 0.058 0.109 0.422 36.039 # _pdbx_phasing_dm.entry_id 2HYK _pdbx_phasing_dm.fom_acentric 0.710 _pdbx_phasing_dm.fom_centric 0.690 _pdbx_phasing_dm.fom 0.710 _pdbx_phasing_dm.reflns_acentric 23426 _pdbx_phasing_dm.reflns_centric 654 _pdbx_phasing_dm.reflns 24080 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 4.600 35.244 ? ? 0.950 0.830 0.940 1050 98 1148 2.900 4.600 ? ? 0.940 0.880 0.930 3295 149 3444 2.300 2.900 ? ? 0.850 0.710 0.840 4166 129 4295 2.000 2.300 ? ? 0.770 0.660 0.770 4171 105 4276 1.700 2.000 ? ? 0.600 0.490 0.590 6997 135 7132 1.600 1.700 ? ? 0.410 0.360 0.410 3747 38 3785 # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLVE 2.08 14-Sept-2004 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 RESOLVE 2.08 14-Sept-2004 package 'Terwilliger, T. C' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 74 ? ? -161.78 -166.72 2 1 TYR A 87 ? ? 72.83 169.24 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 1 ? A THR 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A ASP 4 ? A ASP 4 5 1 Y 1 A MET 5 ? A MET 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A LEU 244 ? A LEU 244 8 1 Y 1 A GLY 245 ? A GLY 245 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'CALCIUM ION' CA 4 ETHANOL EOH 5 GLYCEROL GOL 6 water HOH #