HEADER TRANSCRIPTION 07-AUG-06 2HYT TITLE CRYSTAL STRUCTURE OF A TETR-FAMILY TRANSCRIPTIONAL REGULATOR (ECA1819) TITLE 2 FROM PECTOBACTERIUM ATROSEPTICUM AT 1.64 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETR-FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PECTOBACTERIUM ATROSEPTICUM; SOURCE 3 ORGANISM_TAXID: 29471; SOURCE 4 GENE: YP_049917.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TETR-FAMILY TRANSCRIPTIONAL REGULATOR, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 20-NOV-24 2HYT 1 REMARK REVDAT 7 25-JAN-23 2HYT 1 REMARK SEQADV LINK REVDAT 6 25-OCT-17 2HYT 1 REMARK REVDAT 5 18-OCT-17 2HYT 1 REMARK REVDAT 4 13-JUL-11 2HYT 1 VERSN REVDAT 3 28-JUL-10 2HYT 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2HYT 1 VERSN REVDAT 1 15-AUG-06 2HYT 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF TETR-FAMILY TRANSCRIPTIONAL REGULATOR JRNL TITL 2 (YP_049917.1) FROM ERWINIA CARTOVORA ATROSEPTICA SCRI1043 AT JRNL TITL 3 1.64 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1386 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1880 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1462 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : 0.61000 REMARK 3 B33 (A**2) : -0.91000 REMARK 3 B12 (A**2) : 0.30000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.085 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.260 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1577 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1088 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2145 ; 1.355 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2647 ; 0.907 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 222 ; 4.079 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;33.417 ;23.649 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 276 ;11.738 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;12.119 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 246 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1816 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 323 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 346 ; 0.252 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1174 ; 0.205 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 784 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 831 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 202 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.296 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 61 ; 0.240 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.189 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1077 ; 2.395 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 409 ; 0.526 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1599 ; 2.762 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 609 ; 4.658 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 531 ; 6.475 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): 22.4600 41.3540 12.3500 REMARK 3 T TENSOR REMARK 3 T11: -0.0176 T22: 0.0040 REMARK 3 T33: 0.0344 T12: 0.0272 REMARK 3 T13: 0.0011 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.0853 L22: 0.1992 REMARK 3 L33: 0.4291 L12: 0.1253 REMARK 3 L13: -0.1518 L23: -0.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.0353 S12: -0.0427 S13: 0.0043 REMARK 3 S21: 0.0015 S22: -0.0321 S23: 0.0171 REMARK 3 S31: -0.0022 S32: 0.0392 S33: -0.0032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. EDO MOLECULES FROM THE CRYO SOLUTION ARE MODELED. REMARK 3 4. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 4 REMARK 4 2HYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038922. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-06; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL11-1; BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.000001; 0.979197,0.918370 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING); NULL REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27542 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 27.126 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.79800 REMARK 200 R SYM FOR SHELL (I) : 0.79800 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: REMARK 200 THE STRUCTURE WAS INITIALLY SOLVED BY MAD FROM ONE CRYSTAL AND REMARK 200 REFINEMENT WAS AGAINST DATA FROM A SECOND HIGHER RESOLUTION CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NH4F, 20.0% PEG-3350, NO BUFFER REMARK 280 PH 6.2, VAPOR DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN. SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 300 ASSIGNMENT OF A DIMER AS THE BIOLOGICAL UNIT IS SUPPORTED REMARK 300 BY SIZE EXCLUSION CHROMATOGRAPHY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 448 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 ARG A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 4 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 6 CD NE CZ NH1 NH2 REMARK 470 GLU A 26 CD OE1 OE2 REMARK 470 ARG A 45 NE CZ NH1 NH2 REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LYS A 194 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 65 O HOH A 354 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 172 74.86 -110.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 367950 RELATED DB: TARGETDB DBREF 2HYT A 1 196 UNP Q6D668 Q6D668_ERWCT 1 196 SEQADV 2HYT GLY A 0 UNP Q6D668 EXPRESSION TAG SEQADV 2HYT MSE A 1 UNP Q6D668 MET 1 MODIFIED RESIDUE SEQADV 2HYT MSE A 9 UNP Q6D668 MET 9 MODIFIED RESIDUE SEQADV 2HYT MSE A 34 UNP Q6D668 MET 34 MODIFIED RESIDUE SEQADV 2HYT MSE A 70 UNP Q6D668 MET 70 MODIFIED RESIDUE SEQADV 2HYT MSE A 98 UNP Q6D668 MET 98 MODIFIED RESIDUE SEQADV 2HYT MSE A 131 UNP Q6D668 MET 131 MODIFIED RESIDUE SEQRES 1 A 197 GLY MSE VAL ARG ARG THR ARG ALA GLU MSE GLU GLU THR SEQRES 2 A 197 ARG ALA THR LEU LEU ALA THR ALA ARG LYS VAL PHE SER SEQRES 3 A 197 GLU ARG GLY TYR ALA ASP THR SER MSE ASP ASP LEU THR SEQRES 4 A 197 ALA GLN ALA SER LEU THR ARG GLY ALA LEU TYR HIS HIS SEQRES 5 A 197 PHE GLY ASP LYS LYS GLY LEU LEU ALA ALA VAL VAL GLU SEQRES 6 A 197 GLN ILE ASP ALA GLU MSE ASP GLU ARG LEU GLN ALA ILE SEQRES 7 A 197 SER ASP THR ALA GLU ASP ASP TRP GLU GLY PHE ARG CYS SEQRES 8 A 197 ARG CYS ARG ALA TYR LEU GLU MSE ALA LEU GLU PRO GLU SEQRES 9 A 197 ILE GLN ARG ILE VAL LEU ARG ASP ALA ARG ALA VAL LEU SEQRES 10 A 197 GLY GLY ALA SER PRO ASP SER GLN ARG HIS CYS VAL GLU SEQRES 11 A 197 SER MSE GLN ARG LEU ILE ASP ASN LEU ILE ARG GLN GLY SEQRES 12 A 197 VAL VAL ALA GLU ALA ASP PRO GLN ALA LEU ALA SER LEU SEQRES 13 A 197 ILE TYR GLY SER LEU ALA GLU ALA ALA PHE TRP ILE ALA SEQRES 14 A 197 GLU GLY GLU ASP GLY ASN ALA ARG LEU ALA GLN GLY VAL SEQRES 15 A 197 ALA ALA LEU GLU LEU LEU LEU ARG GLY LEU LEU VAL LYS SEQRES 16 A 197 PRO ARG MODRES 2HYT MSE A 9 MET SELENOMETHIONINE MODRES 2HYT MSE A 34 MET SELENOMETHIONINE MODRES 2HYT MSE A 70 MET SELENOMETHIONINE MODRES 2HYT MSE A 98 MET SELENOMETHIONINE MODRES 2HYT MSE A 131 MET SELENOMETHIONINE HET MSE A 9 13 HET MSE A 34 8 HET MSE A 70 8 HET MSE A 98 8 HET MSE A 131 13 HET EDO A 197 4 HET EDO A 198 4 HET EDO A 199 4 HET EDO A 200 4 HET EDO A 201 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 HOH *292(H2 O) HELIX 1 1 THR A 5 GLY A 28 1 24 HELIX 2 2 SER A 33 SER A 42 1 10 HELIX 3 3 GLY A 46 GLY A 53 1 8 HELIX 4 4 ASP A 54 ALA A 81 1 28 HELIX 5 5 ASP A 83 MSE A 98 1 16 HELIX 6 6 GLU A 101 VAL A 108 1 8 HELIX 7 7 ARG A 110 GLY A 117 1 8 HELIX 8 8 SER A 120 GLN A 141 1 22 HELIX 9 9 ASP A 148 GLY A 170 1 23 HELIX 10 10 ASP A 172 GLY A 190 1 19 LINK C GLU A 8 N MSE A 9 1555 1555 1.34 LINK C MSE A 9 N GLU A 10 1555 1555 1.34 LINK C SER A 33 N MSE A 34 1555 1555 1.32 LINK C MSE A 34 N ASP A 35 1555 1555 1.33 LINK C GLU A 69 N MSE A 70 1555 1555 1.32 LINK C MSE A 70 N ASP A 71 1555 1555 1.33 LINK C GLU A 97 N MSE A 98 1555 1555 1.33 LINK C MSE A 98 N ALA A 99 1555 1555 1.34 LINK C SER A 130 N MSE A 131 1555 1555 1.32 LINK C MSE A 131 N GLN A 132 1555 1555 1.33 SITE 1 AC1 5 ARG A 91 TYR A 95 MSE A 131 HOH A 237 SITE 2 AC1 5 HOH A 334 SITE 1 AC2 7 ARG A 113 ARG A 125 SER A 154 GLU A 162 SITE 2 AC2 7 TRP A 166 GLU A 169 HOH A 382 SITE 1 AC3 5 GLU A 69 ARG A 73 GLU A 103 ILE A 104 SITE 2 AC3 5 HOH A 304 SITE 1 AC4 5 ARG A 73 ALA A 94 GLU A 97 HOH A 324 SITE 2 AC4 5 HOH A 438 SITE 1 AC5 6 GLY A 158 ALA A 161 GLU A 162 PHE A 165 SITE 2 AC5 6 HOH A 273 HOH A 280 CRYST1 82.858 82.858 56.054 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012070 0.006970 0.000000 0.00000 SCALE2 0.000000 0.013940 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017840 0.00000 CONECT 26 33 CONECT 33 26 34 35 CONECT 34 33 36 38 CONECT 35 33 36 39 CONECT 36 34 35 37 46 CONECT 37 36 CONECT 38 34 40 CONECT 39 35 41 CONECT 40 38 42 CONECT 41 39 43 CONECT 42 40 44 CONECT 43 41 45 CONECT 44 42 CONECT 45 43 CONECT 46 36 CONECT 231 235 CONECT 235 231 236 CONECT 236 235 237 239 CONECT 237 236 238 243 CONECT 238 237 CONECT 239 236 240 CONECT 240 239 241 CONECT 241 240 242 CONECT 242 241 CONECT 243 237 CONECT 506 513 CONECT 513 506 514 CONECT 514 513 515 517 CONECT 515 514 516 521 CONECT 516 515 CONECT 517 514 518 CONECT 518 517 519 CONECT 519 518 520 CONECT 520 519 CONECT 521 515 CONECT 750 757 CONECT 757 750 758 CONECT 758 757 759 761 CONECT 759 758 760 765 CONECT 760 759 CONECT 761 758 762 CONECT 762 761 763 CONECT 763 762 764 CONECT 764 763 CONECT 765 759 CONECT 1012 1016 CONECT 1016 1012 1017 1018 CONECT 1017 1016 1019 1021 CONECT 1018 1016 1019 1022 CONECT 1019 1017 1018 1020 1029 CONECT 1020 1019 CONECT 1021 1017 1023 CONECT 1022 1018 1024 CONECT 1023 1021 1025 CONECT 1024 1022 1026 CONECT 1025 1023 1027 CONECT 1026 1024 1028 CONECT 1027 1025 CONECT 1028 1026 CONECT 1029 1019 CONECT 1531 1532 1533 CONECT 1532 1531 CONECT 1533 1531 1534 CONECT 1534 1533 CONECT 1535 1536 1537 CONECT 1536 1535 CONECT 1537 1535 1538 CONECT 1538 1537 CONECT 1539 1540 1541 CONECT 1540 1539 CONECT 1541 1539 1542 CONECT 1542 1541 CONECT 1543 1544 1545 CONECT 1544 1543 CONECT 1545 1543 1546 CONECT 1546 1545 CONECT 1547 1548 1549 CONECT 1548 1547 CONECT 1549 1547 1550 CONECT 1550 1549 MASTER 361 0 10 10 0 0 10 6 1774 1 80 16 END