data_2HZA # _entry.id 2HZA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HZA pdb_00002hza 10.2210/pdb2hza/pdb RCSB RCSB038939 ? ? WWPDB D_1000038939 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Q5Y . unspecified PDB 1Q5V . unspecified PDB 2HZV . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HZA _pdbx_database_status.recvd_initial_deposition_date 2006-08-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schreiter, E.R.' 1 'Drennan, C.L.' 2 # _citation.id primary _citation.title 'NikR-operator complex structure and the mechanism of repressor activation by metal ions.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 103 _citation.page_first 13676 _citation.page_last 13681 _citation.year 2006 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16945905 _citation.pdbx_database_id_DOI 10.1073/pnas.0606247103 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schreiter, E.R.' 1 ? primary 'Wang, S.C.' 2 ? primary 'Zamble, D.B.' 3 ? primary 'Drennan, C.L.' 4 ? # _cell.entry_id 2HZA _cell.length_a 49.843 _cell.length_b 49.843 _cell.length_c 181.691 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HZA _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nickel-responsive regulator' 15212.597 2 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 3 non-polymer man '3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE' 466.520 1 ? ? ? ? 4 water nat water 18.015 25 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)QRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQH HHHDLSVATLHVHINHDDCLEIAVLKGD(MSE)GDVQHFADDVIAQRGVRHGHLQCLPKED ; _entity_poly.pdbx_seq_one_letter_code_can ;MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHD LSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLN n 1 3 ARG n 1 4 VAL n 1 5 THR n 1 6 ILE n 1 7 THR n 1 8 LEU n 1 9 ASP n 1 10 ASP n 1 11 ASP n 1 12 LEU n 1 13 LEU n 1 14 GLU n 1 15 THR n 1 16 LEU n 1 17 ASP n 1 18 SER n 1 19 LEU n 1 20 SER n 1 21 GLN n 1 22 ARG n 1 23 ARG n 1 24 GLY n 1 25 TYR n 1 26 ASN n 1 27 ASN n 1 28 ARG n 1 29 SER n 1 30 GLU n 1 31 ALA n 1 32 ILE n 1 33 ARG n 1 34 ASP n 1 35 ILE n 1 36 LEU n 1 37 ARG n 1 38 SER n 1 39 ALA n 1 40 LEU n 1 41 ALA n 1 42 GLN n 1 43 GLU n 1 44 ALA n 1 45 THR n 1 46 GLN n 1 47 GLN n 1 48 HIS n 1 49 GLY n 1 50 THR n 1 51 GLN n 1 52 GLY n 1 53 PHE n 1 54 ALA n 1 55 VAL n 1 56 LEU n 1 57 SER n 1 58 TYR n 1 59 VAL n 1 60 TYR n 1 61 GLU n 1 62 HIS n 1 63 GLU n 1 64 LYS n 1 65 ARG n 1 66 ASP n 1 67 LEU n 1 68 ALA n 1 69 SER n 1 70 ARG n 1 71 ILE n 1 72 VAL n 1 73 SER n 1 74 THR n 1 75 GLN n 1 76 HIS n 1 77 HIS n 1 78 HIS n 1 79 HIS n 1 80 ASP n 1 81 LEU n 1 82 SER n 1 83 VAL n 1 84 ALA n 1 85 THR n 1 86 LEU n 1 87 HIS n 1 88 VAL n 1 89 HIS n 1 90 ILE n 1 91 ASN n 1 92 HIS n 1 93 ASP n 1 94 ASP n 1 95 CYS n 1 96 LEU n 1 97 GLU n 1 98 ILE n 1 99 ALA n 1 100 VAL n 1 101 LEU n 1 102 LYS n 1 103 GLY n 1 104 ASP n 1 105 MSE n 1 106 GLY n 1 107 ASP n 1 108 VAL n 1 109 GLN n 1 110 HIS n 1 111 PHE n 1 112 ALA n 1 113 ASP n 1 114 ASP n 1 115 VAL n 1 116 ILE n 1 117 ALA n 1 118 GLN n 1 119 ARG n 1 120 GLY n 1 121 VAL n 1 122 ARG n 1 123 HIS n 1 124 GLY n 1 125 HIS n 1 126 LEU n 1 127 GLN n 1 128 CYS n 1 129 LEU n 1 130 PRO n 1 131 LYS n 1 132 GLU n 1 133 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene nikR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NIKR_ECOLI _struct_ref.pdbx_db_accession P0A6Z6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHD LSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HZA A 1 ? 133 ? P0A6Z6 1 ? 133 ? 1 133 2 1 2HZA B 1 ? 133 ? P0A6Z6 1 ? 133 ? 1 133 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HZA MSE A 1 ? UNP P0A6Z6 MET 1 'modified residue' 1 1 1 2HZA MSE A 105 ? UNP P0A6Z6 MET 105 'modified residue' 105 2 2 2HZA MSE B 1 ? UNP P0A6Z6 MET 1 'modified residue' 1 3 2 2HZA MSE B 105 ? UNP P0A6Z6 MET 105 'modified residue' 105 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3CM D-saccharide . '3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE' CYMAL-3 'C21 H38 O11' 466.520 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2HZA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;0.2 M Magnesium chloride hexahydrate, 0.1 M HEPES - Na pH 7.5, 30% v/v Polyethylene Glycol 400, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2004-07-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2HZA _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 43.2 _reflns.d_resolution_high 2.1 _reflns.number_obs 15688 _reflns.number_all 16107 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.08 _reflns.pdbx_netI_over_sigmaI 20.8 _reflns.B_iso_Wilson_estimate 53.9 _reflns.pdbx_redundancy 11.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 90.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HZA _refine.ls_number_reflns_obs 15688 _refine.ls_number_reflns_all 16107 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 390730.16 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.17 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 97.4 _refine.ls_R_factor_obs 0.239 _refine.ls_R_factor_all 0.239 _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.274 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.8 _refine.ls_number_reflns_R_free 911 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 59.4 _refine.aniso_B[1][1] 8.66 _refine.aniso_B[2][2] 8.66 _refine.aniso_B[3][3] -17.31 _refine.aniso_B[1][2] 7.42 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.356222 _refine.solvent_model_param_bsol 56.6611 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model '1Q5Y, 1Q5V' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2HZA _refine_analyze.Luzzati_coordinate_error_obs 0.33 _refine_analyze.Luzzati_sigma_a_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.39 _refine_analyze.Luzzati_sigma_a_free 0.47 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1945 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 2004 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 43.17 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.70 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 3.49 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 4.92 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 5.24 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 6.79 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 2191 _refine_ls_shell.R_factor_R_work 0.382 _refine_ls_shell.percent_reflns_obs 89.3 _refine_ls_shell.R_factor_R_free 0.42 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.percent_reflns_R_free 5.6 _refine_ls_shell.number_reflns_R_free 131 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 ion.param CM3.top 'X-RAY DIFFRACTION' 3 water.param ? 'X-RAY DIFFRACTION' 4 CM3.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2HZA _struct.title 'Nickel-bound full-length Escherichia coli NikR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HZA _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'nickel-binding, ribbon-helix-helix, transcription factor, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly is generated by the two fold axis: y, x, -z ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 9 ? ARG A 23 ? ASP A 9 ARG A 23 1 ? 15 HELX_P HELX_P2 2 ASN A 27 ? GLN A 46 ? ASN A 27 GLN A 46 1 ? 20 HELX_P HELX_P3 3 ASP A 66 ? HIS A 78 ? ASP A 66 HIS A 78 1 ? 13 HELX_P HELX_P4 4 MSE A 105 ? GLN A 118 ? MSE A 105 GLN A 118 1 ? 14 HELX_P HELX_P5 5 ASP B 9 ? GLY B 24 ? ASP B 9 GLY B 24 1 ? 16 HELX_P HELX_P6 6 ASN B 27 ? GLN B 42 ? ASN B 27 GLN B 42 1 ? 16 HELX_P HELX_P7 7 ASP B 66 ? HIS B 78 ? ASP B 66 HIS B 78 1 ? 13 HELX_P HELX_P8 8 MSE B 105 ? ALA B 117 ? MSE B 105 ALA B 117 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A GLN 2 N ? ? A MSE 1 A GLN 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A ASP 104 C ? ? ? 1_555 A MSE 105 N ? ? A ASP 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A MSE 105 C ? ? ? 1_555 A GLY 106 N ? ? A MSE 105 A GLY 106 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? B MSE 1 C ? ? ? 1_555 B GLN 2 N ? ? B MSE 1 B GLN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? B ASP 104 C ? ? ? 1_555 B MSE 105 N ? ? B ASP 104 B MSE 105 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? B MSE 105 C ? ? ? 1_555 B GLY 106 N ? ? B MSE 105 B GLY 106 1_555 ? ? ? ? ? ? ? 1.324 ? ? metalc1 metalc ? ? A HIS 76 NE2 ? ? ? 4_555 E NI . NI ? ? A HIS 76 B NI 301 1_555 ? ? ? ? ? ? ? 2.132 ? ? metalc2 metalc ? ? A HIS 87 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 87 A NI 302 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc3 metalc ? ? A HIS 89 ND1 ? ? ? 1_555 C NI . NI ? ? A HIS 89 A NI 302 1_555 ? ? ? ? ? ? ? 2.040 ? ? metalc4 metalc ? ? A CYS 95 SG ? ? ? 1_555 C NI . NI ? ? A CYS 95 A NI 302 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc5 metalc ? ? C NI . NI ? ? ? 1_555 B HIS 76 NE2 ? ? A NI 302 B HIS 76 4_555 ? ? ? ? ? ? ? 1.945 ? ? metalc6 metalc ? ? B HIS 87 NE2 ? ? ? 1_555 E NI . NI ? ? B HIS 87 B NI 301 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc7 metalc ? ? B HIS 89 ND1 ? ? ? 1_555 E NI . NI ? ? B HIS 89 B NI 301 1_555 ? ? ? ? ? ? ? 1.913 ? ? metalc8 metalc ? ? B CYS 95 SG ? ? ? 1_555 E NI . NI ? ? B CYS 95 B NI 301 1_555 ? ? ? ? ? ? ? 2.057 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? LEU A 8 ? GLN A 2 LEU A 8 A 2 GLN B 2 ? LEU B 8 ? GLN B 2 LEU B 8 B 1 SER A 82 ? HIS A 89 ? SER A 82 HIS A 89 B 2 ASP A 94 ? ASP A 104 ? ASP A 94 ASP A 104 B 3 GLN A 51 ? GLU A 61 ? GLN A 51 GLU A 61 B 4 VAL A 121 ? PRO A 130 ? VAL A 121 PRO A 130 C 1 SER B 82 ? VAL B 88 ? SER B 82 VAL B 88 C 2 ASP B 94 ? ASP B 104 ? ASP B 94 ASP B 104 C 3 GLN B 51 ? GLU B 61 ? GLN B 51 GLU B 61 C 4 VAL B 121 ? PRO B 130 ? VAL B 121 PRO B 130 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 4 ? N VAL A 4 O ILE B 6 ? O ILE B 6 B 1 2 N VAL A 88 ? N VAL A 88 O LEU A 96 ? O LEU A 96 B 2 3 O ALA A 99 ? O ALA A 99 N LEU A 56 ? N LEU A 56 B 3 4 N PHE A 53 ? N PHE A 53 O LEU A 129 ? O LEU A 129 C 1 2 N ALA B 84 ? N ALA B 84 O VAL B 100 ? O VAL B 100 C 2 3 O ALA B 99 ? O ALA B 99 N LEU B 56 ? N LEU B 56 C 3 4 N VAL B 59 ? N VAL B 59 O ARG B 122 ? O ARG B 122 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B 3CM 201 ? 8 'BINDING SITE FOR RESIDUE 3CM B 201' AC2 Software B NI 301 ? 4 'BINDING SITE FOR RESIDUE NI B 301' AC3 Software A NI 302 ? 4 'BINDING SITE FOR RESIDUE NI A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 SER A 20 ? SER A 20 . ? 1_555 ? 2 AC1 8 ARG A 23 ? ARG A 23 . ? 1_555 ? 3 AC1 8 TYR A 25 ? TYR A 25 . ? 1_555 ? 4 AC1 8 ARG B 3 ? ARG B 3 . ? 6_655 ? 5 AC1 8 THR B 5 ? THR B 5 . ? 6_655 ? 6 AC1 8 GLU B 43 ? GLU B 43 . ? 1_555 ? 7 AC1 8 GLY B 124 ? GLY B 124 . ? 1_555 ? 8 AC1 8 HIS B 125 ? HIS B 125 . ? 1_555 ? 9 AC2 4 HIS A 76 ? HIS A 76 . ? 4_555 ? 10 AC2 4 HIS B 87 ? HIS B 87 . ? 1_555 ? 11 AC2 4 HIS B 89 ? HIS B 89 . ? 1_555 ? 12 AC2 4 CYS B 95 ? CYS B 95 . ? 1_555 ? 13 AC3 4 HIS A 87 ? HIS A 87 . ? 1_555 ? 14 AC3 4 HIS A 89 ? HIS A 89 . ? 1_555 ? 15 AC3 4 CYS A 95 ? CYS A 95 . ? 1_555 ? 16 AC3 4 HIS B 76 ? HIS B 76 . ? 4_555 ? # _database_PDB_matrix.entry_id 2HZA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HZA _atom_sites.fract_transf_matrix[1][1] 0.020063 _atom_sites.fract_transf_matrix[1][2] 0.011583 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023167 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005504 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 MSE 105 105 105 MSE MSE A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 CYS 128 128 128 CYS CYS A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLU 132 132 ? ? ? A . n A 1 133 ASP 133 133 ? ? ? A . n B 1 1 MSE 1 1 1 MSE MSE B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ARG 3 3 3 ARG ARG B . n B 1 4 VAL 4 4 4 VAL VAL B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 GLN 21 21 21 GLN GLN B . n B 1 22 ARG 22 22 22 ARG ARG B . n B 1 23 ARG 23 23 23 ARG ARG B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 ASN 26 26 26 ASN ASN B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 ASP 34 34 34 ASP ASP B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 ARG 37 37 37 ARG ARG B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 GLN 42 42 42 GLN GLN B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 ALA 44 44 ? ? ? B . n B 1 45 THR 45 45 ? ? ? B . n B 1 46 GLN 46 46 ? ? ? B . n B 1 47 GLN 47 47 ? ? ? B . n B 1 48 HIS 48 48 ? ? ? B . n B 1 49 GLY 49 49 49 GLY ALA B . n B 1 50 THR 50 50 50 THR THR B . n B 1 51 GLN 51 51 51 GLN GLN B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ALA 54 54 54 ALA ALA B . n B 1 55 VAL 55 55 55 VAL VAL B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 TYR 58 58 58 TYR TYR B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 HIS 62 62 62 HIS HIS B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 LYS 64 64 64 LYS LYS B . n B 1 65 ARG 65 65 65 ARG ARG B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 SER 73 73 73 SER SER B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 GLN 75 75 75 GLN GLN B . n B 1 76 HIS 76 76 76 HIS HIS B . n B 1 77 HIS 77 77 77 HIS HIS B . n B 1 78 HIS 78 78 78 HIS HIS B . n B 1 79 HIS 79 79 79 HIS HIS B . n B 1 80 ASP 80 80 80 ASP ASP B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 SER 82 82 82 SER SER B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 HIS 87 87 87 HIS HIS B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 HIS 89 89 89 HIS HIS B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 ASN 91 91 91 ASN ASN B . n B 1 92 HIS 92 92 92 HIS HIS B . n B 1 93 ASP 93 93 93 ASP ASP B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 ALA 99 99 99 ALA ALA B . n B 1 100 VAL 100 100 100 VAL VAL B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 MSE 105 105 105 MSE MSE B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 ASP 107 107 107 ASP ASP B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 GLN 109 109 109 GLN GLN B . n B 1 110 HIS 110 110 110 HIS HIS B . n B 1 111 PHE 111 111 111 PHE PHE B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 ASP 113 113 113 ASP ASP B . n B 1 114 ASP 114 114 114 ASP ASP B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 ILE 116 116 116 ILE ILE B . n B 1 117 ALA 117 117 117 ALA ALA B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 ARG 119 119 119 ARG ARG B . n B 1 120 GLY 120 120 120 GLY GLY B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 ARG 122 122 122 ARG ARG B . n B 1 123 HIS 123 123 123 HIS HIS B . n B 1 124 GLY 124 124 124 GLY GLY B . n B 1 125 HIS 125 125 125 HIS HIS B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 GLN 127 127 127 GLN GLN B . n B 1 128 CYS 128 128 128 CYS CYS B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 PRO 130 130 130 PRO PRO B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 GLU 132 132 ? ? ? B . n B 1 133 ASP 133 133 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI 1 302 2 NI NI A . D 3 3CM 1 201 1 3CM 3CM B . E 2 NI 1 301 1 NI NI B . F 4 HOH 1 303 1 HOH HOH A . F 4 HOH 2 304 5 HOH HOH A . F 4 HOH 3 305 8 HOH HOH A . F 4 HOH 4 306 9 HOH HOH A . F 4 HOH 5 307 10 HOH HOH A . F 4 HOH 6 308 14 HOH HOH A . F 4 HOH 7 309 16 HOH HOH A . F 4 HOH 8 310 17 HOH HOH A . F 4 HOH 9 311 18 HOH HOH A . F 4 HOH 10 312 20 HOH HOH A . G 4 HOH 1 302 2 HOH HOH B . G 4 HOH 2 303 3 HOH HOH B . G 4 HOH 3 304 4 HOH HOH B . G 4 HOH 4 305 6 HOH HOH B . G 4 HOH 5 306 7 HOH HOH B . G 4 HOH 6 307 11 HOH HOH B . G 4 HOH 7 308 12 HOH HOH B . G 4 HOH 8 309 13 HOH HOH B . G 4 HOH 9 310 15 HOH HOH B . G 4 HOH 10 311 19 HOH HOH B . G 4 HOH 11 312 21 HOH HOH B . G 4 HOH 12 313 22 HOH HOH B . G 4 HOH 13 314 23 HOH HOH B . G 4 HOH 14 315 24 HOH HOH B . G 4 HOH 15 316 25 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 105 A MSE 105 ? MET SELENOMETHIONINE 3 B MSE 1 B MSE 1 ? MET SELENOMETHIONINE 4 B MSE 105 B MSE 105 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14560 ? 1 MORE -156 ? 1 'SSA (A^2)' 22350 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 76 ? A HIS 76 ? 4_555 NI ? E NI . ? B NI 301 ? 1_555 NE2 ? B HIS 87 ? B HIS 87 ? 1_555 171.1 ? 2 NE2 ? A HIS 76 ? A HIS 76 ? 4_555 NI ? E NI . ? B NI 301 ? 1_555 ND1 ? B HIS 89 ? B HIS 89 ? 1_555 90.4 ? 3 NE2 ? B HIS 87 ? B HIS 87 ? 1_555 NI ? E NI . ? B NI 301 ? 1_555 ND1 ? B HIS 89 ? B HIS 89 ? 1_555 98.5 ? 4 NE2 ? A HIS 76 ? A HIS 76 ? 4_555 NI ? E NI . ? B NI 301 ? 1_555 SG ? B CYS 95 ? B CYS 95 ? 1_555 79.4 ? 5 NE2 ? B HIS 87 ? B HIS 87 ? 1_555 NI ? E NI . ? B NI 301 ? 1_555 SG ? B CYS 95 ? B CYS 95 ? 1_555 91.7 ? 6 ND1 ? B HIS 89 ? B HIS 89 ? 1_555 NI ? E NI . ? B NI 301 ? 1_555 SG ? B CYS 95 ? B CYS 95 ? 1_555 169.7 ? 7 NE2 ? A HIS 87 ? A HIS 87 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 ND1 ? A HIS 89 ? A HIS 89 ? 1_555 95.6 ? 8 NE2 ? A HIS 87 ? A HIS 87 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 SG ? A CYS 95 ? A CYS 95 ? 1_555 90.8 ? 9 ND1 ? A HIS 89 ? A HIS 89 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 SG ? A CYS 95 ? A CYS 95 ? 1_555 173.6 ? 10 NE2 ? A HIS 87 ? A HIS 87 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 NE2 ? B HIS 76 ? B HIS 76 ? 4_555 167.2 ? 11 ND1 ? A HIS 89 ? A HIS 89 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 NE2 ? B HIS 76 ? B HIS 76 ? 4_555 94.1 ? 12 SG ? A CYS 95 ? A CYS 95 ? 1_555 NI ? C NI . ? A NI 302 ? 1_555 NE2 ? B HIS 76 ? B HIS 76 ? 4_555 79.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-22 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.conn_type_id' 21 4 'Structure model' '_struct_conn.id' 22 4 'Structure model' '_struct_conn.pdbx_dist_value' 23 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr1_symmetry' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_conn.ptnr2_symmetry' 40 4 'Structure model' '_struct_conn_type.id' 41 4 'Structure model' '_struct_ref_seq_dif.details' 42 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 45 5 'Structure model' '_chem_comp_atom.atom_id' 46 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 ADSC 'data collection' QUANTUM ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 EPMR phasing . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 66 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 66 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 66 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 92.47 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -18.53 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 64 ? ? -8.09 -122.25 2 1 ASP A 66 ? ? 70.12 35.20 3 1 HIS A 79 ? ? -52.56 -6.41 4 1 VAL A 83 ? ? -94.32 -63.94 5 1 GLN A 118 ? ? -29.83 147.28 6 1 ARG B 22 ? ? -59.96 -71.99 7 1 ARG B 23 ? ? -47.48 -10.25 8 1 LYS B 64 ? ? -6.97 -83.50 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 11 ? CG ? A ASP 11 CG 2 1 Y 1 A ASP 11 ? OD1 ? A ASP 11 OD1 3 1 Y 1 A ASP 11 ? OD2 ? A ASP 11 OD2 4 1 Y 1 A GLU 14 ? CG ? A GLU 14 CG 5 1 Y 1 A GLU 14 ? CD ? A GLU 14 CD 6 1 Y 1 A GLU 14 ? OE1 ? A GLU 14 OE1 7 1 Y 1 A GLU 14 ? OE2 ? A GLU 14 OE2 8 1 Y 1 A SER 18 ? OG ? A SER 18 OG 9 1 Y 1 A ARG 22 ? CG ? A ARG 22 CG 10 1 Y 1 A ARG 22 ? CD ? A ARG 22 CD 11 1 Y 1 A ARG 22 ? NE ? A ARG 22 NE 12 1 Y 1 A ARG 22 ? CZ ? A ARG 22 CZ 13 1 Y 1 A ARG 22 ? NH1 ? A ARG 22 NH1 14 1 Y 1 A ARG 22 ? NH2 ? A ARG 22 NH2 15 1 Y 1 A GLU 61 ? CG ? A GLU 61 CG 16 1 Y 1 A GLU 61 ? CD ? A GLU 61 CD 17 1 Y 1 A GLU 61 ? OE1 ? A GLU 61 OE1 18 1 Y 1 A GLU 61 ? OE2 ? A GLU 61 OE2 19 1 Y 1 A LYS 64 ? CG ? A LYS 64 CG 20 1 Y 1 A LYS 64 ? CD ? A LYS 64 CD 21 1 Y 1 A LYS 64 ? CE ? A LYS 64 CE 22 1 Y 1 A LYS 64 ? NZ ? A LYS 64 NZ 23 1 Y 1 A ARG 65 ? CG ? A ARG 65 CG 24 1 Y 1 A ARG 65 ? CD ? A ARG 65 CD 25 1 Y 1 A ARG 65 ? NE ? A ARG 65 NE 26 1 Y 1 A ARG 65 ? CZ ? A ARG 65 CZ 27 1 Y 1 A ARG 65 ? NH1 ? A ARG 65 NH1 28 1 Y 1 A ARG 65 ? NH2 ? A ARG 65 NH2 29 1 Y 1 A ASP 66 ? CG ? A ASP 66 CG 30 1 Y 1 A ASP 66 ? OD1 ? A ASP 66 OD1 31 1 Y 1 A ASP 66 ? OD2 ? A ASP 66 OD2 32 1 Y 1 A HIS 77 ? CG ? A HIS 77 CG 33 1 Y 1 A HIS 77 ? ND1 ? A HIS 77 ND1 34 1 Y 1 A HIS 77 ? CD2 ? A HIS 77 CD2 35 1 Y 1 A HIS 77 ? CE1 ? A HIS 77 CE1 36 1 Y 1 A HIS 77 ? NE2 ? A HIS 77 NE2 37 1 Y 1 A ARG 119 ? CG ? A ARG 119 CG 38 1 Y 1 A ARG 119 ? CD ? A ARG 119 CD 39 1 Y 1 A ARG 119 ? NE ? A ARG 119 NE 40 1 Y 1 A ARG 119 ? CZ ? A ARG 119 CZ 41 1 Y 1 A ARG 119 ? NH1 ? A ARG 119 NH1 42 1 Y 1 A ARG 119 ? NH2 ? A ARG 119 NH2 43 1 Y 1 A LYS 131 ? CG ? A LYS 131 CG 44 1 Y 1 A LYS 131 ? CD ? A LYS 131 CD 45 1 Y 1 A LYS 131 ? CE ? A LYS 131 CE 46 1 Y 1 A LYS 131 ? NZ ? A LYS 131 NZ 47 1 Y 1 B ARG 3 ? CG ? B ARG 3 CG 48 1 Y 1 B ARG 3 ? CD ? B ARG 3 CD 49 1 Y 1 B ARG 3 ? NE ? B ARG 3 NE 50 1 Y 1 B ARG 3 ? CZ ? B ARG 3 CZ 51 1 Y 1 B ARG 3 ? NH1 ? B ARG 3 NH1 52 1 Y 1 B ARG 3 ? NH2 ? B ARG 3 NH2 53 1 Y 1 B ARG 22 ? CG ? B ARG 22 CG 54 1 Y 1 B ARG 22 ? CD ? B ARG 22 CD 55 1 Y 1 B ARG 22 ? NE ? B ARG 22 NE 56 1 Y 1 B ARG 22 ? CZ ? B ARG 22 CZ 57 1 Y 1 B ARG 22 ? NH1 ? B ARG 22 NH1 58 1 Y 1 B ARG 22 ? NH2 ? B ARG 22 NH2 59 1 Y 1 B ARG 23 ? CG ? B ARG 23 CG 60 1 Y 1 B ARG 23 ? CD ? B ARG 23 CD 61 1 Y 1 B ARG 23 ? NE ? B ARG 23 NE 62 1 Y 1 B ARG 23 ? CZ ? B ARG 23 CZ 63 1 Y 1 B ARG 23 ? NH1 ? B ARG 23 NH1 64 1 Y 1 B ARG 23 ? NH2 ? B ARG 23 NH2 65 1 Y 1 B GLN 42 ? CG ? B GLN 42 CG 66 1 Y 1 B GLN 42 ? CD ? B GLN 42 CD 67 1 Y 1 B GLN 42 ? OE1 ? B GLN 42 OE1 68 1 Y 1 B GLN 42 ? NE2 ? B GLN 42 NE2 69 1 Y 1 B GLU 61 ? CG ? B GLU 61 CG 70 1 Y 1 B GLU 61 ? CD ? B GLU 61 CD 71 1 Y 1 B GLU 61 ? OE1 ? B GLU 61 OE1 72 1 Y 1 B GLU 61 ? OE2 ? B GLU 61 OE2 73 1 Y 1 B GLU 63 ? CG ? B GLU 63 CG 74 1 Y 1 B GLU 63 ? CD ? B GLU 63 CD 75 1 Y 1 B GLU 63 ? OE1 ? B GLU 63 OE1 76 1 Y 1 B GLU 63 ? OE2 ? B GLU 63 OE2 77 1 Y 1 B LYS 64 ? CG ? B LYS 64 CG 78 1 Y 1 B LYS 64 ? CD ? B LYS 64 CD 79 1 Y 1 B LYS 64 ? CE ? B LYS 64 CE 80 1 Y 1 B LYS 64 ? NZ ? B LYS 64 NZ 81 1 Y 1 B ARG 65 ? CG ? B ARG 65 CG 82 1 Y 1 B ARG 65 ? CD ? B ARG 65 CD 83 1 Y 1 B ARG 65 ? NE ? B ARG 65 NE 84 1 Y 1 B ARG 65 ? CZ ? B ARG 65 CZ 85 1 Y 1 B ARG 65 ? NH1 ? B ARG 65 NH1 86 1 Y 1 B ARG 65 ? NH2 ? B ARG 65 NH2 87 1 Y 1 B HIS 92 ? CG ? B HIS 92 CG 88 1 Y 1 B HIS 92 ? ND1 ? B HIS 92 ND1 89 1 Y 1 B HIS 92 ? CD2 ? B HIS 92 CD2 90 1 Y 1 B HIS 92 ? CE1 ? B HIS 92 CE1 91 1 Y 1 B HIS 92 ? NE2 ? B HIS 92 NE2 92 1 Y 1 B ARG 119 ? CG ? B ARG 119 CG 93 1 Y 1 B ARG 119 ? CD ? B ARG 119 CD 94 1 Y 1 B ARG 119 ? NE ? B ARG 119 NE 95 1 Y 1 B ARG 119 ? CZ ? B ARG 119 CZ 96 1 Y 1 B ARG 119 ? NH1 ? B ARG 119 NH1 97 1 Y 1 B ARG 119 ? NH2 ? B ARG 119 NH2 98 1 Y 1 B LYS 131 ? CG ? B LYS 131 CG 99 1 Y 1 B LYS 131 ? CD ? B LYS 131 CD 100 1 Y 1 B LYS 131 ? CE ? B LYS 131 CE 101 1 Y 1 B LYS 131 ? NZ ? B LYS 131 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 132 ? A GLU 132 2 1 Y 1 A ASP 133 ? A ASP 133 3 1 Y 1 B ALA 44 ? B ALA 44 4 1 Y 1 B THR 45 ? B THR 45 5 1 Y 1 B GLN 46 ? B GLN 46 6 1 Y 1 B GLN 47 ? B GLN 47 7 1 Y 1 B HIS 48 ? B HIS 48 8 1 Y 1 B GLU 132 ? B GLU 132 9 1 Y 1 B ASP 133 ? B ASP 133 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3CM C1 C N R 1 3CM C2 C N R 2 3CM C3 C N S 3 3CM C4 C N S 4 3CM C5 C N R 5 3CM C6 C N N 6 3CM O2 O N N 7 3CM O3 O N N 8 3CM O5 O N N 9 3CM O6 O N N 10 3CM O1 O N N 11 3CM O4 O N N 12 3CM C10 C N R 13 3CM C20 C N R 14 3CM C30 C N R 15 3CM C40 C N S 16 3CM C50 C N R 17 3CM C60 C N N 18 3CM O10 O N N 19 3CM O20 O N N 20 3CM O30 O N N 21 3CM O50 O N N 22 3CM O60 O N N 23 3CM C11 C N N 24 3CM C21 C N N 25 3CM C31 C N N 26 3CM C12 C N N 27 3CM C22 C N N 28 3CM C32 C N N 29 3CM C42 C N N 30 3CM C52 C N N 31 3CM C62 C N N 32 3CM HO6 H N N 33 3CM H61 H N N 34 3CM H62A H N N 35 3CM H5 H N N 36 3CM H1 H N N 37 3CM H40 H N N 38 3CM H30 H N N 39 3CM HO30 H N N 40 3CM H20 H N N 41 3CM HO20 H N N 42 3CM H10 H N N 43 3CM H111 H N N 44 3CM H112 H N N 45 3CM H211 H N N 46 3CM H212 H N N 47 3CM H311 H N N 48 3CM H312 H N N 49 3CM H12 H N N 50 3CM H6 H N N 51 3CM H7 H N N 52 3CM H421 H N N 53 3CM H422 H N N 54 3CM H8 H N N 55 3CM H9 H N N 56 3CM H50 H N N 57 3CM H601 H N N 58 3CM H602 H N N 59 3CM HO60 H N N 60 3CM H2 H N N 61 3CM HO2 H N N 62 3CM H3 H N N 63 3CM HO3 H N N 64 3CM H4 H N N 65 3CM HO4 H N N 66 3CM H22 H N N 67 3CM H32 H N N 68 3CM H52 H N N 69 3CM H62 H N N 70 ALA N N N N 71 ALA CA C N S 72 ALA C C N N 73 ALA O O N N 74 ALA CB C N N 75 ALA OXT O N N 76 ALA H H N N 77 ALA H2 H N N 78 ALA HA H N N 79 ALA HB1 H N N 80 ALA HB2 H N N 81 ALA HB3 H N N 82 ALA HXT H N N 83 ARG N N N N 84 ARG CA C N S 85 ARG C C N N 86 ARG O O N N 87 ARG CB C N N 88 ARG CG C N N 89 ARG CD C N N 90 ARG NE N N N 91 ARG CZ C N N 92 ARG NH1 N N N 93 ARG NH2 N N N 94 ARG OXT O N N 95 ARG H H N N 96 ARG H2 H N N 97 ARG HA H N N 98 ARG HB2 H N N 99 ARG HB3 H N N 100 ARG HG2 H N N 101 ARG HG3 H N N 102 ARG HD2 H N N 103 ARG HD3 H N N 104 ARG HE H N N 105 ARG HH11 H N N 106 ARG HH12 H N N 107 ARG HH21 H N N 108 ARG HH22 H N N 109 ARG HXT H N N 110 ASN N N N N 111 ASN CA C N S 112 ASN C C N N 113 ASN O O N N 114 ASN CB C N N 115 ASN CG C N N 116 ASN OD1 O N N 117 ASN ND2 N N N 118 ASN OXT O N N 119 ASN H H N N 120 ASN H2 H N N 121 ASN HA H N N 122 ASN HB2 H N N 123 ASN HB3 H N N 124 ASN HD21 H N N 125 ASN HD22 H N N 126 ASN HXT H N N 127 ASP N N N N 128 ASP CA C N S 129 ASP C C N N 130 ASP O O N N 131 ASP CB C N N 132 ASP CG C N N 133 ASP OD1 O N N 134 ASP OD2 O N N 135 ASP OXT O N N 136 ASP H H N N 137 ASP H2 H N N 138 ASP HA H N N 139 ASP HB2 H N N 140 ASP HB3 H N N 141 ASP HD2 H N N 142 ASP HXT H N N 143 CYS N N N N 144 CYS CA C N R 145 CYS C C N N 146 CYS O O N N 147 CYS CB C N N 148 CYS SG S N N 149 CYS OXT O N N 150 CYS H H N N 151 CYS H2 H N N 152 CYS HA H N N 153 CYS HB2 H N N 154 CYS HB3 H N N 155 CYS HG H N N 156 CYS HXT H N N 157 GLN N N N N 158 GLN CA C N S 159 GLN C C N N 160 GLN O O N N 161 GLN CB C N N 162 GLN CG C N N 163 GLN CD C N N 164 GLN OE1 O N N 165 GLN NE2 N N N 166 GLN OXT O N N 167 GLN H H N N 168 GLN H2 H N N 169 GLN HA H N N 170 GLN HB2 H N N 171 GLN HB3 H N N 172 GLN HG2 H N N 173 GLN HG3 H N N 174 GLN HE21 H N N 175 GLN HE22 H N N 176 GLN HXT H N N 177 GLU N N N N 178 GLU CA C N S 179 GLU C C N N 180 GLU O O N N 181 GLU CB C N N 182 GLU CG C N N 183 GLU CD C N N 184 GLU OE1 O N N 185 GLU OE2 O N N 186 GLU OXT O N N 187 GLU H H N N 188 GLU H2 H N N 189 GLU HA H N N 190 GLU HB2 H N N 191 GLU HB3 H N N 192 GLU HG2 H N N 193 GLU HG3 H N N 194 GLU HE2 H N N 195 GLU HXT H N N 196 GLY N N N N 197 GLY CA C N N 198 GLY C C N N 199 GLY O O N N 200 GLY OXT O N N 201 GLY H H N N 202 GLY H2 H N N 203 GLY HA2 H N N 204 GLY HA3 H N N 205 GLY HXT H N N 206 HIS N N N N 207 HIS CA C N S 208 HIS C C N N 209 HIS O O N N 210 HIS CB C N N 211 HIS CG C Y N 212 HIS ND1 N Y N 213 HIS CD2 C Y N 214 HIS CE1 C Y N 215 HIS NE2 N Y N 216 HIS OXT O N N 217 HIS H H N N 218 HIS H2 H N N 219 HIS HA H N N 220 HIS HB2 H N N 221 HIS HB3 H N N 222 HIS HD1 H N N 223 HIS HD2 H N N 224 HIS HE1 H N N 225 HIS HE2 H N N 226 HIS HXT H N N 227 HOH O O N N 228 HOH H1 H N N 229 HOH H2 H N N 230 ILE N N N N 231 ILE CA C N S 232 ILE C C N N 233 ILE O O N N 234 ILE CB C N S 235 ILE CG1 C N N 236 ILE CG2 C N N 237 ILE CD1 C N N 238 ILE OXT O N N 239 ILE H H N N 240 ILE H2 H N N 241 ILE HA H N N 242 ILE HB H N N 243 ILE HG12 H N N 244 ILE HG13 H N N 245 ILE HG21 H N N 246 ILE HG22 H N N 247 ILE HG23 H N N 248 ILE HD11 H N N 249 ILE HD12 H N N 250 ILE HD13 H N N 251 ILE HXT H N N 252 LEU N N N N 253 LEU CA C N S 254 LEU C C N N 255 LEU O O N N 256 LEU CB C N N 257 LEU CG C N N 258 LEU CD1 C N N 259 LEU CD2 C N N 260 LEU OXT O N N 261 LEU H H N N 262 LEU H2 H N N 263 LEU HA H N N 264 LEU HB2 H N N 265 LEU HB3 H N N 266 LEU HG H N N 267 LEU HD11 H N N 268 LEU HD12 H N N 269 LEU HD13 H N N 270 LEU HD21 H N N 271 LEU HD22 H N N 272 LEU HD23 H N N 273 LEU HXT H N N 274 LYS N N N N 275 LYS CA C N S 276 LYS C C N N 277 LYS O O N N 278 LYS CB C N N 279 LYS CG C N N 280 LYS CD C N N 281 LYS CE C N N 282 LYS NZ N N N 283 LYS OXT O N N 284 LYS H H N N 285 LYS H2 H N N 286 LYS HA H N N 287 LYS HB2 H N N 288 LYS HB3 H N N 289 LYS HG2 H N N 290 LYS HG3 H N N 291 LYS HD2 H N N 292 LYS HD3 H N N 293 LYS HE2 H N N 294 LYS HE3 H N N 295 LYS HZ1 H N N 296 LYS HZ2 H N N 297 LYS HZ3 H N N 298 LYS HXT H N N 299 MET N N N N 300 MET CA C N S 301 MET C C N N 302 MET O O N N 303 MET CB C N N 304 MET CG C N N 305 MET SD S N N 306 MET CE C N N 307 MET OXT O N N 308 MET H H N N 309 MET H2 H N N 310 MET HA H N N 311 MET HB2 H N N 312 MET HB3 H N N 313 MET HG2 H N N 314 MET HG3 H N N 315 MET HE1 H N N 316 MET HE2 H N N 317 MET HE3 H N N 318 MET HXT H N N 319 MSE N N N N 320 MSE CA C N S 321 MSE C C N N 322 MSE O O N N 323 MSE OXT O N N 324 MSE CB C N N 325 MSE CG C N N 326 MSE SE SE N N 327 MSE CE C N N 328 MSE H H N N 329 MSE H2 H N N 330 MSE HA H N N 331 MSE HXT H N N 332 MSE HB2 H N N 333 MSE HB3 H N N 334 MSE HG2 H N N 335 MSE HG3 H N N 336 MSE HE1 H N N 337 MSE HE2 H N N 338 MSE HE3 H N N 339 NI NI NI N N 340 PHE N N N N 341 PHE CA C N S 342 PHE C C N N 343 PHE O O N N 344 PHE CB C N N 345 PHE CG C Y N 346 PHE CD1 C Y N 347 PHE CD2 C Y N 348 PHE CE1 C Y N 349 PHE CE2 C Y N 350 PHE CZ C Y N 351 PHE OXT O N N 352 PHE H H N N 353 PHE H2 H N N 354 PHE HA H N N 355 PHE HB2 H N N 356 PHE HB3 H N N 357 PHE HD1 H N N 358 PHE HD2 H N N 359 PHE HE1 H N N 360 PHE HE2 H N N 361 PHE HZ H N N 362 PHE HXT H N N 363 PRO N N N N 364 PRO CA C N S 365 PRO C C N N 366 PRO O O N N 367 PRO CB C N N 368 PRO CG C N N 369 PRO CD C N N 370 PRO OXT O N N 371 PRO H H N N 372 PRO HA H N N 373 PRO HB2 H N N 374 PRO HB3 H N N 375 PRO HG2 H N N 376 PRO HG3 H N N 377 PRO HD2 H N N 378 PRO HD3 H N N 379 PRO HXT H N N 380 SER N N N N 381 SER CA C N S 382 SER C C N N 383 SER O O N N 384 SER CB C N N 385 SER OG O N N 386 SER OXT O N N 387 SER H H N N 388 SER H2 H N N 389 SER HA H N N 390 SER HB2 H N N 391 SER HB3 H N N 392 SER HG H N N 393 SER HXT H N N 394 THR N N N N 395 THR CA C N S 396 THR C C N N 397 THR O O N N 398 THR CB C N R 399 THR OG1 O N N 400 THR CG2 C N N 401 THR OXT O N N 402 THR H H N N 403 THR H2 H N N 404 THR HA H N N 405 THR HB H N N 406 THR HG1 H N N 407 THR HG21 H N N 408 THR HG22 H N N 409 THR HG23 H N N 410 THR HXT H N N 411 TYR N N N N 412 TYR CA C N S 413 TYR C C N N 414 TYR O O N N 415 TYR CB C N N 416 TYR CG C Y N 417 TYR CD1 C Y N 418 TYR CD2 C Y N 419 TYR CE1 C Y N 420 TYR CE2 C Y N 421 TYR CZ C Y N 422 TYR OH O N N 423 TYR OXT O N N 424 TYR H H N N 425 TYR H2 H N N 426 TYR HA H N N 427 TYR HB2 H N N 428 TYR HB3 H N N 429 TYR HD1 H N N 430 TYR HD2 H N N 431 TYR HE1 H N N 432 TYR HE2 H N N 433 TYR HH H N N 434 TYR HXT H N N 435 VAL N N N N 436 VAL CA C N S 437 VAL C C N N 438 VAL O O N N 439 VAL CB C N N 440 VAL CG1 C N N 441 VAL CG2 C N N 442 VAL OXT O N N 443 VAL H H N N 444 VAL H2 H N N 445 VAL HA H N N 446 VAL HB H N N 447 VAL HG11 H N N 448 VAL HG12 H N N 449 VAL HG13 H N N 450 VAL HG21 H N N 451 VAL HG22 H N N 452 VAL HG23 H N N 453 VAL HXT H N N 454 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3CM C1 O5 sing N N 1 3CM C1 H1 sing N N 2 3CM C1 O1 sing N N 3 3CM C1 C2 sing N N 4 3CM C2 H2 sing N N 5 3CM C2 O2 sing N N 6 3CM C2 C3 sing N N 7 3CM C3 H3 sing N N 8 3CM C3 O3 sing N N 9 3CM C3 C4 sing N N 10 3CM C4 C5 sing N N 11 3CM C4 H4 sing N N 12 3CM C4 O4 sing N N 13 3CM C5 C6 sing N N 14 3CM C5 H5 sing N N 15 3CM C5 O5 sing N N 16 3CM C6 O6 sing N N 17 3CM C6 H61 sing N N 18 3CM C6 H62A sing N N 19 3CM O2 HO2 sing N N 20 3CM O3 HO3 sing N N 21 3CM O6 HO6 sing N N 22 3CM O1 C40 sing N N 23 3CM O4 HO4 sing N N 24 3CM C10 C20 sing N N 25 3CM C10 H10 sing N N 26 3CM C10 O10 sing N N 27 3CM C10 O50 sing N N 28 3CM C20 C30 sing N N 29 3CM C20 H20 sing N N 30 3CM C20 O20 sing N N 31 3CM C30 C40 sing N N 32 3CM C30 H30 sing N N 33 3CM C30 O30 sing N N 34 3CM C40 H40 sing N N 35 3CM C40 C50 sing N N 36 3CM C50 O50 sing N N 37 3CM C50 H50 sing N N 38 3CM C50 C60 sing N N 39 3CM C60 H601 sing N N 40 3CM C60 H602 sing N N 41 3CM C60 O60 sing N N 42 3CM O10 C11 sing N N 43 3CM O20 HO20 sing N N 44 3CM O30 HO30 sing N N 45 3CM O60 HO60 sing N N 46 3CM C11 H111 sing N N 47 3CM C11 H112 sing N N 48 3CM C11 C21 sing N N 49 3CM C21 H211 sing N N 50 3CM C21 H212 sing N N 51 3CM C21 C31 sing N N 52 3CM C31 H311 sing N N 53 3CM C31 H312 sing N N 54 3CM C31 C12 sing N N 55 3CM C12 H12 sing N N 56 3CM C12 C22 sing N N 57 3CM C12 C62 sing N N 58 3CM C22 H6 sing N N 59 3CM C22 C32 sing N N 60 3CM C22 H22 sing N N 61 3CM C32 H7 sing N N 62 3CM C32 C42 sing N N 63 3CM C32 H32 sing N N 64 3CM C42 H421 sing N N 65 3CM C42 H422 sing N N 66 3CM C42 C52 sing N N 67 3CM C52 H8 sing N N 68 3CM C52 C62 sing N N 69 3CM C52 H52 sing N N 70 3CM C62 H9 sing N N 71 3CM C62 H62 sing N N 72 ALA N CA sing N N 73 ALA N H sing N N 74 ALA N H2 sing N N 75 ALA CA C sing N N 76 ALA CA CB sing N N 77 ALA CA HA sing N N 78 ALA C O doub N N 79 ALA C OXT sing N N 80 ALA CB HB1 sing N N 81 ALA CB HB2 sing N N 82 ALA CB HB3 sing N N 83 ALA OXT HXT sing N N 84 ARG N CA sing N N 85 ARG N H sing N N 86 ARG N H2 sing N N 87 ARG CA C sing N N 88 ARG CA CB sing N N 89 ARG CA HA sing N N 90 ARG C O doub N N 91 ARG C OXT sing N N 92 ARG CB CG sing N N 93 ARG CB HB2 sing N N 94 ARG CB HB3 sing N N 95 ARG CG CD sing N N 96 ARG CG HG2 sing N N 97 ARG CG HG3 sing N N 98 ARG CD NE sing N N 99 ARG CD HD2 sing N N 100 ARG CD HD3 sing N N 101 ARG NE CZ sing N N 102 ARG NE HE sing N N 103 ARG CZ NH1 sing N N 104 ARG CZ NH2 doub N N 105 ARG NH1 HH11 sing N N 106 ARG NH1 HH12 sing N N 107 ARG NH2 HH21 sing N N 108 ARG NH2 HH22 sing N N 109 ARG OXT HXT sing N N 110 ASN N CA sing N N 111 ASN N H sing N N 112 ASN N H2 sing N N 113 ASN CA C sing N N 114 ASN CA CB sing N N 115 ASN CA HA sing N N 116 ASN C O doub N N 117 ASN C OXT sing N N 118 ASN CB CG sing N N 119 ASN CB HB2 sing N N 120 ASN CB HB3 sing N N 121 ASN CG OD1 doub N N 122 ASN CG ND2 sing N N 123 ASN ND2 HD21 sing N N 124 ASN ND2 HD22 sing N N 125 ASN OXT HXT sing N N 126 ASP N CA sing N N 127 ASP N H sing N N 128 ASP N H2 sing N N 129 ASP CA C sing N N 130 ASP CA CB sing N N 131 ASP CA HA sing N N 132 ASP C O doub N N 133 ASP C OXT sing N N 134 ASP CB CG sing N N 135 ASP CB HB2 sing N N 136 ASP CB HB3 sing N N 137 ASP CG OD1 doub N N 138 ASP CG OD2 sing N N 139 ASP OD2 HD2 sing N N 140 ASP OXT HXT sing N N 141 CYS N CA sing N N 142 CYS N H sing N N 143 CYS N H2 sing N N 144 CYS CA C sing N N 145 CYS CA CB sing N N 146 CYS CA HA sing N N 147 CYS C O doub N N 148 CYS C OXT sing N N 149 CYS CB SG sing N N 150 CYS CB HB2 sing N N 151 CYS CB HB3 sing N N 152 CYS SG HG sing N N 153 CYS OXT HXT sing N N 154 GLN N CA sing N N 155 GLN N H sing N N 156 GLN N H2 sing N N 157 GLN CA C sing N N 158 GLN CA CB sing N N 159 GLN CA HA sing N N 160 GLN C O doub N N 161 GLN C OXT sing N N 162 GLN CB CG sing N N 163 GLN CB HB2 sing N N 164 GLN CB HB3 sing N N 165 GLN CG CD sing N N 166 GLN CG HG2 sing N N 167 GLN CG HG3 sing N N 168 GLN CD OE1 doub N N 169 GLN CD NE2 sing N N 170 GLN NE2 HE21 sing N N 171 GLN NE2 HE22 sing N N 172 GLN OXT HXT sing N N 173 GLU N CA sing N N 174 GLU N H sing N N 175 GLU N H2 sing N N 176 GLU CA C sing N N 177 GLU CA CB sing N N 178 GLU CA HA sing N N 179 GLU C O doub N N 180 GLU C OXT sing N N 181 GLU CB CG sing N N 182 GLU CB HB2 sing N N 183 GLU CB HB3 sing N N 184 GLU CG CD sing N N 185 GLU CG HG2 sing N N 186 GLU CG HG3 sing N N 187 GLU CD OE1 doub N N 188 GLU CD OE2 sing N N 189 GLU OE2 HE2 sing N N 190 GLU OXT HXT sing N N 191 GLY N CA sing N N 192 GLY N H sing N N 193 GLY N H2 sing N N 194 GLY CA C sing N N 195 GLY CA HA2 sing N N 196 GLY CA HA3 sing N N 197 GLY C O doub N N 198 GLY C OXT sing N N 199 GLY OXT HXT sing N N 200 HIS N CA sing N N 201 HIS N H sing N N 202 HIS N H2 sing N N 203 HIS CA C sing N N 204 HIS CA CB sing N N 205 HIS CA HA sing N N 206 HIS C O doub N N 207 HIS C OXT sing N N 208 HIS CB CG sing N N 209 HIS CB HB2 sing N N 210 HIS CB HB3 sing N N 211 HIS CG ND1 sing Y N 212 HIS CG CD2 doub Y N 213 HIS ND1 CE1 doub Y N 214 HIS ND1 HD1 sing N N 215 HIS CD2 NE2 sing Y N 216 HIS CD2 HD2 sing N N 217 HIS CE1 NE2 sing Y N 218 HIS CE1 HE1 sing N N 219 HIS NE2 HE2 sing N N 220 HIS OXT HXT sing N N 221 HOH O H1 sing N N 222 HOH O H2 sing N N 223 ILE N CA sing N N 224 ILE N H sing N N 225 ILE N H2 sing N N 226 ILE CA C sing N N 227 ILE CA CB sing N N 228 ILE CA HA sing N N 229 ILE C O doub N N 230 ILE C OXT sing N N 231 ILE CB CG1 sing N N 232 ILE CB CG2 sing N N 233 ILE CB HB sing N N 234 ILE CG1 CD1 sing N N 235 ILE CG1 HG12 sing N N 236 ILE CG1 HG13 sing N N 237 ILE CG2 HG21 sing N N 238 ILE CG2 HG22 sing N N 239 ILE CG2 HG23 sing N N 240 ILE CD1 HD11 sing N N 241 ILE CD1 HD12 sing N N 242 ILE CD1 HD13 sing N N 243 ILE OXT HXT sing N N 244 LEU N CA sing N N 245 LEU N H sing N N 246 LEU N H2 sing N N 247 LEU CA C sing N N 248 LEU CA CB sing N N 249 LEU CA HA sing N N 250 LEU C O doub N N 251 LEU C OXT sing N N 252 LEU CB CG sing N N 253 LEU CB HB2 sing N N 254 LEU CB HB3 sing N N 255 LEU CG CD1 sing N N 256 LEU CG CD2 sing N N 257 LEU CG HG sing N N 258 LEU CD1 HD11 sing N N 259 LEU CD1 HD12 sing N N 260 LEU CD1 HD13 sing N N 261 LEU CD2 HD21 sing N N 262 LEU CD2 HD22 sing N N 263 LEU CD2 HD23 sing N N 264 LEU OXT HXT sing N N 265 LYS N CA sing N N 266 LYS N H sing N N 267 LYS N H2 sing N N 268 LYS CA C sing N N 269 LYS CA CB sing N N 270 LYS CA HA sing N N 271 LYS C O doub N N 272 LYS C OXT sing N N 273 LYS CB CG sing N N 274 LYS CB HB2 sing N N 275 LYS CB HB3 sing N N 276 LYS CG CD sing N N 277 LYS CG HG2 sing N N 278 LYS CG HG3 sing N N 279 LYS CD CE sing N N 280 LYS CD HD2 sing N N 281 LYS CD HD3 sing N N 282 LYS CE NZ sing N N 283 LYS CE HE2 sing N N 284 LYS CE HE3 sing N N 285 LYS NZ HZ1 sing N N 286 LYS NZ HZ2 sing N N 287 LYS NZ HZ3 sing N N 288 LYS OXT HXT sing N N 289 MET N CA sing N N 290 MET N H sing N N 291 MET N H2 sing N N 292 MET CA C sing N N 293 MET CA CB sing N N 294 MET CA HA sing N N 295 MET C O doub N N 296 MET C OXT sing N N 297 MET CB CG sing N N 298 MET CB HB2 sing N N 299 MET CB HB3 sing N N 300 MET CG SD sing N N 301 MET CG HG2 sing N N 302 MET CG HG3 sing N N 303 MET SD CE sing N N 304 MET CE HE1 sing N N 305 MET CE HE2 sing N N 306 MET CE HE3 sing N N 307 MET OXT HXT sing N N 308 MSE N CA sing N N 309 MSE N H sing N N 310 MSE N H2 sing N N 311 MSE CA C sing N N 312 MSE CA CB sing N N 313 MSE CA HA sing N N 314 MSE C O doub N N 315 MSE C OXT sing N N 316 MSE OXT HXT sing N N 317 MSE CB CG sing N N 318 MSE CB HB2 sing N N 319 MSE CB HB3 sing N N 320 MSE CG SE sing N N 321 MSE CG HG2 sing N N 322 MSE CG HG3 sing N N 323 MSE SE CE sing N N 324 MSE CE HE1 sing N N 325 MSE CE HE2 sing N N 326 MSE CE HE3 sing N N 327 PHE N CA sing N N 328 PHE N H sing N N 329 PHE N H2 sing N N 330 PHE CA C sing N N 331 PHE CA CB sing N N 332 PHE CA HA sing N N 333 PHE C O doub N N 334 PHE C OXT sing N N 335 PHE CB CG sing N N 336 PHE CB HB2 sing N N 337 PHE CB HB3 sing N N 338 PHE CG CD1 doub Y N 339 PHE CG CD2 sing Y N 340 PHE CD1 CE1 sing Y N 341 PHE CD1 HD1 sing N N 342 PHE CD2 CE2 doub Y N 343 PHE CD2 HD2 sing N N 344 PHE CE1 CZ doub Y N 345 PHE CE1 HE1 sing N N 346 PHE CE2 CZ sing Y N 347 PHE CE2 HE2 sing N N 348 PHE CZ HZ sing N N 349 PHE OXT HXT sing N N 350 PRO N CA sing N N 351 PRO N CD sing N N 352 PRO N H sing N N 353 PRO CA C sing N N 354 PRO CA CB sing N N 355 PRO CA HA sing N N 356 PRO C O doub N N 357 PRO C OXT sing N N 358 PRO CB CG sing N N 359 PRO CB HB2 sing N N 360 PRO CB HB3 sing N N 361 PRO CG CD sing N N 362 PRO CG HG2 sing N N 363 PRO CG HG3 sing N N 364 PRO CD HD2 sing N N 365 PRO CD HD3 sing N N 366 PRO OXT HXT sing N N 367 SER N CA sing N N 368 SER N H sing N N 369 SER N H2 sing N N 370 SER CA C sing N N 371 SER CA CB sing N N 372 SER CA HA sing N N 373 SER C O doub N N 374 SER C OXT sing N N 375 SER CB OG sing N N 376 SER CB HB2 sing N N 377 SER CB HB3 sing N N 378 SER OG HG sing N N 379 SER OXT HXT sing N N 380 THR N CA sing N N 381 THR N H sing N N 382 THR N H2 sing N N 383 THR CA C sing N N 384 THR CA CB sing N N 385 THR CA HA sing N N 386 THR C O doub N N 387 THR C OXT sing N N 388 THR CB OG1 sing N N 389 THR CB CG2 sing N N 390 THR CB HB sing N N 391 THR OG1 HG1 sing N N 392 THR CG2 HG21 sing N N 393 THR CG2 HG22 sing N N 394 THR CG2 HG23 sing N N 395 THR OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 '3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE' 3CM 4 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1Q5Y '1Q5Y, 1Q5V' 2 ? 'experimental model' PDB 1Q5V '1Q5Y, 1Q5V' #