HEADER ISOMERASE 08-AUG-06 2HZG TITLE CRYSTAL STRUCTURE OF PREDICTED MANDELATE RACEMASE FROM RHODOBACTER TITLE 2 SPHAEROIDES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME/ENOLASE COMPND 3 SUPERFAMILY; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 ORGANISM_TAXID: 1063; SOURCE 4 GENE: RSP_3884; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ATCC BAA-808 KEYWDS STRUCTURAL GENOMICS, PREDICTED MANDELATE RACEMASE, PSI, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, NYSGXRC, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,R.TORO,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 2HZG 1 REMARK REVDAT 6 03-FEB-21 2HZG 1 AUTHOR REMARK SEQADV LINK REVDAT 5 18-OCT-17 2HZG 1 REMARK REVDAT 4 01-FEB-17 2HZG 1 TITLE REVDAT 3 13-JUL-11 2HZG 1 VERSN REVDAT 2 24-FEB-09 2HZG 1 VERSN REVDAT 1 29-AUG-06 2HZG 0 JRNL AUTH U.A.RAMAGOPAL,R.TORO,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PREDICTED MANDELATE RACEMASE FROM JRNL TITL 2 RHODOBACTER SPHAEROIDES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 60305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3047 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.02 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2656 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.2270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 895 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.95000 REMARK 3 B22 (A**2) : 2.33000 REMARK 3 B33 (A**2) : -1.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.953 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6218 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8480 ; 1.325 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 833 ; 6.016 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 274 ;30.938 ;22.664 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 945 ;13.507 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;16.759 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 920 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4922 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3312 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4248 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 858 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 9 ; 0.102 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.129 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 44 ; 0.149 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4026 ; 0.658 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6391 ; 1.221 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2261 ; 2.146 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2088 ; 3.616 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE METHOD TO DETERMINE THIS STRUCTURE WAS S-SAD (SAD REMARK 3 WITH SULFUR) REMARK 4 REMARK 4 2HZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.74300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60305 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.04900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.20800 REMARK 200 R SYM FOR SHELL (I) : 0.18100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M TRI-SODIUM CITRATE DIHYDRATE PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.08600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.35400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.86350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.35400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.08600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.86350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 HIS A 398 REMARK 465 HIS A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 MET B 1 REMARK 465 LEU B 393 REMARK 465 GLU B 394 REMARK 465 GLY B 395 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 HIS B 398 REMARK 465 HIS B 399 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 61 -174.12 -179.20 REMARK 500 VAL A 71 -57.10 -122.09 REMARK 500 TRP A 168 -135.48 59.16 REMARK 500 THR A 307 -136.74 -128.58 REMARK 500 HIS B 61 -172.32 178.18 REMARK 500 TRP B 168 -139.48 62.93 REMARK 500 PHE B 306 23.81 -160.95 REMARK 500 THR B 307 -115.13 -129.46 REMARK 500 ALA B 368 -39.64 -37.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1103 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 174 O REMARK 620 2 HOH A1366 O 85.4 REMARK 620 3 HOH A1396 O 96.7 172.5 REMARK 620 4 HOH A1400 O 107.5 91.4 94.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1101 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 199 OD2 REMARK 620 2 GLU A 227 OE2 96.3 REMARK 620 3 GLU A 254 OE2 147.9 88.9 REMARK 620 4 HOH A1228 O 71.8 107.9 76.4 REMARK 620 5 HOH A1258 O 91.3 95.2 119.8 152.4 REMARK 620 6 HOH A1266 O 98.6 164.6 80.4 80.4 80.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1102 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 199 OD2 REMARK 620 2 GLU B 227 OE2 96.1 REMARK 620 3 GLU B 254 OE1 162.4 71.9 REMARK 620 4 GLU B 254 OE2 152.6 111.1 42.5 REMARK 620 5 HOH B1359 O 76.1 119.1 120.7 87.2 REMARK 620 6 HOH B1363 O 92.3 96.5 76.8 88.3 143.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-9278A RELATED DB: TARGETDB DBREF 2HZG A 4 393 UNP Q3HKK5 Q3HKK5_RHOS4 2 391 DBREF 2HZG B 4 393 UNP Q3HKK5 Q3HKK5_RHOS4 2 391 SEQADV 2HZG MET A 1 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG SER A 2 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG LEU A 3 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG GLU A 394 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG GLY A 395 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 396 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 397 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 398 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 399 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 400 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS A 401 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG MET B 1 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG SER B 2 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG LEU B 3 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG GLU B 394 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG GLY B 395 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 396 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 397 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 398 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 399 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 400 UNP Q3HKK5 CLONING ARTIFACT SEQADV 2HZG HIS B 401 UNP Q3HKK5 CLONING ARTIFACT SEQRES 1 A 401 MET SER LEU LYS ILE ASP ALA VAL ASP LEU PHE TYR LEU SEQRES 2 A 401 SER MET PRO GLU VAL THR ASP ALA ALA ASP GLY SER GLN SEQRES 3 A 401 ASP ALA LEU LEU VAL ARG VAL ALA ALA GLY GLY HIS ILE SEQRES 4 A 401 GLY TRP GLY GLU CYS GLU ALA ALA PRO LEU PRO SER ILE SEQRES 5 A 401 ALA ALA PHE VAL CYS PRO LYS SER HIS GLY VAL CYS ARG SEQRES 6 A 401 PRO VAL SER ASP SER VAL LEU GLY GLN ARG LEU ASP GLY SEQRES 7 A 401 PRO ASP ASP ILE ALA ARG ILE ALA ALA LEU VAL GLY TYR SEQRES 8 A 401 ASN SER MET ASP LEU LEU GLN ALA PRO HIS MET LEU SER SEQRES 9 A 401 GLY ILE GLU MET ALA LEU TRP ASP LEU LEU GLY ARG ARG SEQRES 10 A 401 LEU SER ALA PRO ALA TRP ALA LEU LEU GLY TYR SER ALA SEQRES 11 A 401 SER HIS GLY LYS ARG PRO TYR ALA SER LEU LEU PHE GLY SEQRES 12 A 401 ASP THR PRO GLN GLU THR LEU GLU ARG ALA ARG ALA ALA SEQRES 13 A 401 ARG ARG ASP GLY PHE ALA ALA VAL LYS PHE GLY TRP GLY SEQRES 14 A 401 PRO ILE GLY ARG GLY THR VAL ALA ALA ASP ALA ASP GLN SEQRES 15 A 401 ILE MET ALA ALA ARG GLU GLY LEU GLY PRO ASP GLY ASP SEQRES 16 A 401 LEU MET VAL ASP VAL GLY GLN ILE PHE GLY GLU ASP VAL SEQRES 17 A 401 GLU ALA ALA ALA ALA ARG LEU PRO THR LEU ASP ALA ALA SEQRES 18 A 401 GLY VAL LEU TRP LEU GLU GLU PRO PHE ASP ALA GLY ALA SEQRES 19 A 401 LEU ALA ALA HIS ALA ALA LEU ALA GLY ARG GLY ALA ARG SEQRES 20 A 401 VAL ARG ILE ALA GLY GLY GLU ALA ALA HIS ASN PHE HIS SEQRES 21 A 401 MET ALA GLN HIS LEU MET ASP TYR GLY ARG ILE GLY PHE SEQRES 22 A 401 ILE GLN ILE ASP CYS GLY ARG ILE GLY GLY LEU GLY PRO SEQRES 23 A 401 ALA LYS ARG VAL ALA ASP ALA ALA GLN ALA ARG GLY ILE SEQRES 24 A 401 THR TYR VAL ASN HIS THR PHE THR SER HIS LEU ALA LEU SEQRES 25 A 401 SER ALA SER LEU GLN PRO PHE ALA GLY LEU GLU ALA ASP SEQRES 26 A 401 ARG ILE CYS GLU TYR PRO ALA ALA PRO GLN GLN LEU ALA SEQRES 27 A 401 LEU ASP ILE THR GLY ASP HIS ILE ARG PRO ASP ALA GLU SEQRES 28 A 401 GLY LEU ILE ARG ALA PRO GLU ALA PRO GLY LEU GLY LEU SEQRES 29 A 401 GLN VAL ALA ALA SER ALA LEU ARG ARG TYR LEU VAL GLU SEQRES 30 A 401 THR GLU ILE ARG ILE GLY GLY GLN LEU ILE TYR ARG THR SEQRES 31 A 401 PRO GLN LEU GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 401 MET SER LEU LYS ILE ASP ALA VAL ASP LEU PHE TYR LEU SEQRES 2 B 401 SER MET PRO GLU VAL THR ASP ALA ALA ASP GLY SER GLN SEQRES 3 B 401 ASP ALA LEU LEU VAL ARG VAL ALA ALA GLY GLY HIS ILE SEQRES 4 B 401 GLY TRP GLY GLU CYS GLU ALA ALA PRO LEU PRO SER ILE SEQRES 5 B 401 ALA ALA PHE VAL CYS PRO LYS SER HIS GLY VAL CYS ARG SEQRES 6 B 401 PRO VAL SER ASP SER VAL LEU GLY GLN ARG LEU ASP GLY SEQRES 7 B 401 PRO ASP ASP ILE ALA ARG ILE ALA ALA LEU VAL GLY TYR SEQRES 8 B 401 ASN SER MET ASP LEU LEU GLN ALA PRO HIS MET LEU SER SEQRES 9 B 401 GLY ILE GLU MET ALA LEU TRP ASP LEU LEU GLY ARG ARG SEQRES 10 B 401 LEU SER ALA PRO ALA TRP ALA LEU LEU GLY TYR SER ALA SEQRES 11 B 401 SER HIS GLY LYS ARG PRO TYR ALA SER LEU LEU PHE GLY SEQRES 12 B 401 ASP THR PRO GLN GLU THR LEU GLU ARG ALA ARG ALA ALA SEQRES 13 B 401 ARG ARG ASP GLY PHE ALA ALA VAL LYS PHE GLY TRP GLY SEQRES 14 B 401 PRO ILE GLY ARG GLY THR VAL ALA ALA ASP ALA ASP GLN SEQRES 15 B 401 ILE MET ALA ALA ARG GLU GLY LEU GLY PRO ASP GLY ASP SEQRES 16 B 401 LEU MET VAL ASP VAL GLY GLN ILE PHE GLY GLU ASP VAL SEQRES 17 B 401 GLU ALA ALA ALA ALA ARG LEU PRO THR LEU ASP ALA ALA SEQRES 18 B 401 GLY VAL LEU TRP LEU GLU GLU PRO PHE ASP ALA GLY ALA SEQRES 19 B 401 LEU ALA ALA HIS ALA ALA LEU ALA GLY ARG GLY ALA ARG SEQRES 20 B 401 VAL ARG ILE ALA GLY GLY GLU ALA ALA HIS ASN PHE HIS SEQRES 21 B 401 MET ALA GLN HIS LEU MET ASP TYR GLY ARG ILE GLY PHE SEQRES 22 B 401 ILE GLN ILE ASP CYS GLY ARG ILE GLY GLY LEU GLY PRO SEQRES 23 B 401 ALA LYS ARG VAL ALA ASP ALA ALA GLN ALA ARG GLY ILE SEQRES 24 B 401 THR TYR VAL ASN HIS THR PHE THR SER HIS LEU ALA LEU SEQRES 25 B 401 SER ALA SER LEU GLN PRO PHE ALA GLY LEU GLU ALA ASP SEQRES 26 B 401 ARG ILE CYS GLU TYR PRO ALA ALA PRO GLN GLN LEU ALA SEQRES 27 B 401 LEU ASP ILE THR GLY ASP HIS ILE ARG PRO ASP ALA GLU SEQRES 28 B 401 GLY LEU ILE ARG ALA PRO GLU ALA PRO GLY LEU GLY LEU SEQRES 29 B 401 GLN VAL ALA ALA SER ALA LEU ARG ARG TYR LEU VAL GLU SEQRES 30 B 401 THR GLU ILE ARG ILE GLY GLY GLN LEU ILE TYR ARG THR SEQRES 31 B 401 PRO GLN LEU GLU GLY HIS HIS HIS HIS HIS HIS HET NA A1101 1 HET NA A1103 1 HET GOL A1201 6 HET GOL A1203 6 HET NA B1102 1 HET GOL B1202 6 HET GOL B1204 6 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NA 3(NA 1+) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 10 HOH *895(H2 O) HELIX 1 1 ASP A 23 SER A 25 5 3 HELIX 2 2 ALA A 47 CYS A 57 1 11 HELIX 3 3 PRO A 66 VAL A 71 5 6 HELIX 4 4 GLY A 78 SER A 93 1 16 HELIX 5 5 GLN A 98 SER A 119 1 22 HELIX 6 6 PRO A 121 LEU A 126 1 6 HELIX 7 7 THR A 145 ASP A 159 1 15 HELIX 8 8 THR A 175 GLY A 191 1 17 HELIX 9 9 ASP A 207 ALA A 213 1 7 HELIX 10 10 ARG A 214 ALA A 221 1 8 HELIX 11 11 ALA A 234 GLY A 243 1 10 HELIX 12 12 ASN A 258 GLY A 269 1 12 HELIX 13 13 ASP A 277 GLY A 282 1 6 HELIX 14 14 GLY A 283 GLY A 298 1 16 HELIX 15 15 SER A 308 GLN A 317 1 10 HELIX 16 16 PRO A 318 ALA A 320 5 3 HELIX 17 17 GLN A 335 ILE A 341 1 7 HELIX 18 18 ALA A 367 LEU A 375 1 9 HELIX 19 19 ASP B 23 SER B 25 5 3 HELIX 20 20 ALA B 47 CYS B 57 1 11 HELIX 21 21 PRO B 66 VAL B 71 5 6 HELIX 22 22 GLY B 78 SER B 93 1 16 HELIX 23 23 GLN B 98 LEU B 118 1 21 HELIX 24 24 PRO B 121 LEU B 126 1 6 HELIX 25 25 THR B 145 ASP B 159 1 15 HELIX 26 26 THR B 175 GLY B 191 1 17 HELIX 27 27 ASP B 207 ALA B 213 1 7 HELIX 28 28 ARG B 214 ALA B 221 1 8 HELIX 29 29 ALA B 234 GLY B 243 1 10 HELIX 30 30 ASN B 258 TYR B 268 1 11 HELIX 31 31 ASP B 277 GLY B 282 1 6 HELIX 32 32 GLY B 283 GLY B 298 1 16 HELIX 33 33 SER B 308 GLN B 317 1 10 HELIX 34 34 PRO B 318 ALA B 320 5 3 HELIX 35 35 GLN B 335 ILE B 341 1 7 HELIX 36 36 ALA B 367 LEU B 375 1 9 SHEET 1 A 3 ILE A 5 SER A 14 0 SHEET 2 A 3 ASP A 27 ALA A 35 -1 O ARG A 32 N ASP A 9 SHEET 3 A 3 HIS A 38 CYS A 44 -1 O GLY A 42 N VAL A 31 SHEET 1 B 8 THR A 300 ASN A 303 0 SHEET 2 B 8 PHE A 273 ILE A 276 1 N ILE A 274 O THR A 300 SHEET 3 B 8 ARG A 249 GLY A 252 1 N GLY A 252 O GLN A 275 SHEET 4 B 8 TRP A 225 GLU A 227 1 N LEU A 226 O ARG A 249 SHEET 5 B 8 ASP A 195 ASP A 199 1 N VAL A 198 O GLU A 227 SHEET 6 B 8 ALA A 163 GLY A 167 1 N VAL A 164 O ASP A 195 SHEET 7 B 8 ARG A 135 LEU A 141 1 N ALA A 138 O LYS A 165 SHEET 8 B 8 ILE A 327 PRO A 331 1 O TYR A 330 N SER A 139 SHEET 1 C 4 GLN A 385 ARG A 389 0 SHEET 2 C 4 THR A 378 ILE A 382 -1 N ILE A 380 O ILE A 387 SHEET 3 C 4 THR B 378 ILE B 382 -1 O GLU B 379 N ARG A 381 SHEET 4 C 4 GLN B 385 ARG B 389 -1 O ILE B 387 N ILE B 380 SHEET 1 D 3 ILE B 5 SER B 14 0 SHEET 2 D 3 ASP B 27 ALA B 35 -1 O LEU B 30 N PHE B 11 SHEET 3 D 3 HIS B 38 CYS B 44 -1 O GLY B 42 N VAL B 31 SHEET 1 E 8 THR B 300 ASN B 303 0 SHEET 2 E 8 PHE B 273 ILE B 276 1 N ILE B 274 O VAL B 302 SHEET 3 E 8 ARG B 249 GLY B 252 1 N GLY B 252 O GLN B 275 SHEET 4 E 8 TRP B 225 GLU B 227 1 N LEU B 226 O ARG B 249 SHEET 5 E 8 ASP B 195 ASP B 199 1 N VAL B 198 O GLU B 227 SHEET 6 E 8 ALA B 163 GLY B 167 1 N PHE B 166 O ASP B 199 SHEET 7 E 8 ARG B 135 LEU B 141 1 N LEU B 140 O LYS B 165 SHEET 8 E 8 ILE B 327 GLU B 329 1 O CYS B 328 N ARG B 135 LINK O GLY A 174 NA NA A1103 1555 1555 2.32 LINK OD2 ASP A 199 NA NA A1101 1555 1555 2.34 LINK OE2 GLU A 227 NA NA A1101 1555 1555 2.34 LINK OE2 GLU A 254 NA NA A1101 1555 1555 2.17 LINK NA NA A1101 O HOH A1228 1555 1555 2.84 LINK NA NA A1101 O HOH A1258 1555 1555 2.57 LINK NA NA A1101 O HOH A1266 1555 1555 2.46 LINK NA NA A1103 O HOH A1366 1555 1555 2.53 LINK NA NA A1103 O HOH A1396 1555 1555 2.31 LINK NA NA A1103 O HOH A1400 1555 1555 2.35 LINK OD2 ASP B 199 NA NA B1102 1555 1555 2.38 LINK OE2 GLU B 227 NA NA B1102 1555 1555 2.42 LINK OE1 GLU B 254 NA NA B1102 1555 1555 2.38 LINK OE2 GLU B 254 NA NA B1102 1555 1555 3.20 LINK NA NA B1102 O HOH B1359 1555 1555 2.45 LINK NA NA B1102 O HOH B1363 1555 1555 2.38 SITE 1 AC1 7 ASP A 199 GLU A 227 GLU A 254 HIS A 304 SITE 2 AC1 7 HOH A1228 HOH A1258 HOH A1266 SITE 1 AC2 5 ASP B 199 GLU B 227 GLU B 254 HOH B1359 SITE 2 AC2 5 HOH B1363 SITE 1 AC3 5 GLY A 174 HOH A1366 HOH A1396 HOH A1400 SITE 2 AC3 5 HOH B1423 SITE 1 AC4 5 ARG A 249 ARG A 270 GLY A 272 HOH A1215 SITE 2 AC4 5 HOH A1640 SITE 1 AC5 4 ASP B 159 GLY B 160 PHE B 161 TYR B 330 SITE 1 AC6 1 GLY A 160 SITE 1 AC7 7 LEU B 224 PHE B 273 THR B 300 ALA B 324 SITE 2 AC7 7 ARG B 326 ILE B 327 HOH B1212 CRYST1 62.172 117.727 132.708 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016084 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008494 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007535 0.00000