HEADER STRUCTURAL PROTEIN 10-AUG-06 2I0N TITLE STRUCTURE OF DICTYOSTELIUM DISCOIDEUM MYOSIN VII SH3 DOMAIN WITH TITLE 2 ADJACENT PROLINE RICH REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASS VII UNCONVENTIONAL MYOSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_TAXID: 44689; SOURCE 4 GENE: MYOI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS BETA-SHEET LOOP, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Q.WANG,M.A.DELOIA,Y.KANG,C.LITCHKE,M.A.TITUS,K.J.WALTERS REVDAT 4 09-MAR-22 2I0N 1 REMARK SEQADV REVDAT 3 24-FEB-09 2I0N 1 VERSN REVDAT 2 13-FEB-07 2I0N 1 JRNL REVDAT 1 09-JAN-07 2I0N 0 JRNL AUTH Q.WANG,M.A.DELOIA,Y.KANG,C.LITCHKE,N.ZHANG,M.A.TITUS, JRNL AUTH 2 K.J.WALTERS JRNL TITL THE SH3 DOMAIN OF A M7 INTERACTS WITH ITS C-TERMINAL JRNL TITL 2 PROLINE-RICH REGION. JRNL REF PROTEIN SCI. V. 16 189 2007 JRNL REFN ISSN 0961-8368 JRNL PMID 17189480 JRNL DOI 10.1110/PS.062496807 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 1995, X-PLOR 3.851 REMARK 3 AUTHORS : DELAGLIO ET AL. (NMRPIPE), BRUNGER (X-PLOR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2I0N COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038988. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 20MM NAPO4, 100MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : PROTEIN U-15N, 20MM PHOSPHATE REMARK 210 BUFFER, 100MM NACL, 90% H2O, 10% REMARK 210 D2O; PROTEIN U-13C, 20MM REMARK 210 PHOSPHATE BUFFER, 100MM NACL, 90% REMARK 210 H2O, 10% D2O; PROTEIN U-15N,13C, REMARK 210 20MM PHOSPHATE BUFFER, 100MM REMARK 210 NACL, 90% H2O, 10% D2O; REMARK 210 UNLABELED SAMPLE, 20MM PHOSPHATE REMARK 210 BUFFER, 100MM NACL, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-EDITED NOESY-HSQC; 13C REMARK 210 -EDITED NOESY-HSQC; 2D NOESY; REMARK 210 15N-13C HNCA; 15N-13C HNCOCA REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING IN XPLOR REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 21 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 11 -43.70 -163.41 REMARK 500 1 ASP A 23 22.00 -172.42 REMARK 500 1 LEU A 26 -168.41 -109.98 REMARK 500 1 ARG A 31 174.07 -48.27 REMARK 500 1 ASN A 32 55.64 33.36 REMARK 500 1 THR A 36 90.59 -63.07 REMARK 500 1 ILE A 37 109.50 -52.89 REMARK 500 1 PHE A 39 112.78 -162.06 REMARK 500 1 ASP A 41 -76.79 -111.38 REMARK 500 1 ASN A 44 -34.15 -171.69 REMARK 500 1 LYS A 45 -77.03 -104.43 REMARK 500 1 LEU A 51 -134.79 -146.18 REMARK 500 1 ASN A 52 93.42 -54.08 REMARK 500 1 PHE A 58 138.67 -170.12 REMARK 500 1 HIS A 62 47.15 -149.35 REMARK 500 2 LEU A 4 94.93 53.31 REMARK 500 2 PRO A 7 -163.93 -71.93 REMARK 500 2 GLU A 8 47.88 -90.58 REMARK 500 2 ALA A 10 121.68 -170.24 REMARK 500 2 LYS A 17 -160.87 -173.53 REMARK 500 2 ASP A 23 -173.79 -179.73 REMARK 500 2 SER A 25 14.00 -140.12 REMARK 500 2 ARG A 31 174.79 -47.92 REMARK 500 2 ASN A 32 48.20 34.69 REMARK 500 2 THR A 36 104.55 -55.96 REMARK 500 2 ILE A 37 88.50 -58.91 REMARK 500 2 PHE A 39 99.49 -170.90 REMARK 500 2 LEU A 51 -125.26 -145.91 REMARK 500 2 ASN A 52 93.48 -47.75 REMARK 500 2 PHE A 58 137.99 -177.17 REMARK 500 2 HIS A 62 32.00 -148.05 REMARK 500 2 LEU A 67 -81.51 -77.10 REMARK 500 2 SER A 68 -59.03 -132.15 REMARK 500 3 ALA A 10 115.86 175.76 REMARK 500 3 LYS A 11 90.53 -60.92 REMARK 500 3 TYR A 12 -173.91 -51.00 REMARK 500 3 VAL A 21 104.24 -160.26 REMARK 500 3 ASP A 23 -73.91 -115.75 REMARK 500 3 THR A 24 -51.61 -155.11 REMARK 500 3 ARG A 31 175.91 -51.70 REMARK 500 3 ASN A 32 52.93 33.88 REMARK 500 3 THR A 36 88.16 -62.50 REMARK 500 3 LYS A 40 -178.76 -64.46 REMARK 500 3 LEU A 51 -149.95 -116.28 REMARK 500 3 ASN A 52 89.80 -53.67 REMARK 500 3 LYS A 54 114.55 -162.08 REMARK 500 3 PHE A 58 138.86 -172.45 REMARK 500 3 HIS A 62 51.94 -148.64 REMARK 500 3 HIS A 77 132.13 63.04 REMARK 500 4 SER A 6 156.46 60.67 REMARK 500 REMARK 500 THIS ENTRY HAS 313 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 14 0.30 SIDE CHAIN REMARK 500 1 ARG A 31 0.23 SIDE CHAIN REMARK 500 2 ARG A 14 0.22 SIDE CHAIN REMARK 500 2 ARG A 31 0.25 SIDE CHAIN REMARK 500 3 ARG A 14 0.32 SIDE CHAIN REMARK 500 3 ARG A 31 0.30 SIDE CHAIN REMARK 500 4 ARG A 14 0.32 SIDE CHAIN REMARK 500 4 ARG A 31 0.24 SIDE CHAIN REMARK 500 5 ARG A 14 0.23 SIDE CHAIN REMARK 500 5 ARG A 31 0.25 SIDE CHAIN REMARK 500 6 ARG A 14 0.32 SIDE CHAIN REMARK 500 6 ARG A 31 0.24 SIDE CHAIN REMARK 500 7 ARG A 14 0.31 SIDE CHAIN REMARK 500 7 ARG A 31 0.30 SIDE CHAIN REMARK 500 8 ARG A 14 0.31 SIDE CHAIN REMARK 500 8 ARG A 31 0.31 SIDE CHAIN REMARK 500 9 ARG A 14 0.26 SIDE CHAIN REMARK 500 9 ARG A 31 0.32 SIDE CHAIN REMARK 500 10 ARG A 14 0.21 SIDE CHAIN REMARK 500 10 ARG A 31 0.26 SIDE CHAIN REMARK 500 11 ARG A 14 0.20 SIDE CHAIN REMARK 500 11 ARG A 31 0.31 SIDE CHAIN REMARK 500 12 ARG A 14 0.19 SIDE CHAIN REMARK 500 12 ARG A 31 0.29 SIDE CHAIN REMARK 500 13 ARG A 14 0.25 SIDE CHAIN REMARK 500 13 ARG A 31 0.27 SIDE CHAIN REMARK 500 14 ARG A 14 0.30 SIDE CHAIN REMARK 500 14 ARG A 31 0.30 SIDE CHAIN REMARK 500 15 ARG A 14 0.26 SIDE CHAIN REMARK 500 15 ARG A 31 0.25 SIDE CHAIN REMARK 500 16 ARG A 14 0.32 SIDE CHAIN REMARK 500 16 ARG A 31 0.30 SIDE CHAIN REMARK 500 17 ARG A 14 0.28 SIDE CHAIN REMARK 500 17 ARG A 31 0.24 SIDE CHAIN REMARK 500 18 ARG A 14 0.27 SIDE CHAIN REMARK 500 18 ARG A 31 0.24 SIDE CHAIN REMARK 500 19 ARG A 14 0.25 SIDE CHAIN REMARK 500 19 ARG A 31 0.23 SIDE CHAIN REMARK 500 20 ARG A 14 0.29 SIDE CHAIN REMARK 500 20 ARG A 31 0.24 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 2I0N A 10 80 UNP Q9U1M8 Q9U1M8_DICDI 1620 1690 SEQADV 2I0N MET A 1 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N GLY A 2 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N PRO A 3 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N LEU A 4 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N GLY A 5 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N SER A 6 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N PRO A 7 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N GLU A 8 UNP Q9U1M8 CLONING ARTIFACT SEQADV 2I0N PHE A 9 UNP Q9U1M8 CLONING ARTIFACT SEQRES 1 A 80 MET GLY PRO LEU GLY SER PRO GLU PHE ALA LYS TYR ALA SEQRES 2 A 80 ARG ALA LEU LYS ASP TYR ASN VAL SER ASP THR SER LEU SEQRES 3 A 80 LEU PRO PHE LYS ARG ASN ASP ILE ILE THR ILE THR PHE SEQRES 4 A 80 LYS ASP GLN GLU ASN LYS TRP PHE MET GLY GLN LEU ASN SEQRES 5 A 80 GLY LYS GLU GLY SER PHE PRO VAL ASP HIS VAL GLU ILE SEQRES 6 A 80 LEU LEU SER ASP VAL PRO PRO PRO GLN PRO VAL HIS PRO SEQRES 7 A 80 VAL ALA SHEET 1 A 5 LYS A 54 PRO A 59 0 SHEET 2 A 5 TRP A 46 LEU A 51 -1 N LEU A 51 O LYS A 54 SHEET 3 A 5 ASP A 33 LYS A 40 -1 N PHE A 39 O MET A 48 SHEET 4 A 5 TYR A 12 ALA A 15 -1 N ALA A 15 O ASP A 33 SHEET 5 A 5 VAL A 63 LEU A 66 -1 O LEU A 66 N TYR A 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1