HEADER ISOMERASE 24-AUG-06 2I55 TITLE COMPLEX OF GLUCOSE-1,6-BISPHOSPHATE WITH PHOSPHOMANNOMUTASE FROM TITLE 2 LEISHMANIA MEXICANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMANNOMUTASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 5.4.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MEXICANA; SOURCE 3 ORGANISM_TAXID: 5665; SOURCE 4 STRAIN: M379; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPROEX HTB KEYWDS HAD DOMAIN, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.J.SMITH REVDAT 7 25-OCT-23 2I55 1 HETSYN REVDAT 6 29-JUL-20 2I55 1 REMARK LINK SITE REVDAT 5 18-OCT-17 2I55 1 REMARK REVDAT 4 21-DEC-11 2I55 1 HET HETATM HETNAM REVDAT 3 13-JUL-11 2I55 1 VERSN REVDAT 2 24-FEB-09 2I55 1 VERSN REVDAT 1 17-APR-07 2I55 0 JRNL AUTH L.KEDZIERSKI,R.L.MALBY,B.J.SMITH,M.A.PERUGINI,A.N.HODDER, JRNL AUTH 2 T.ILG,P.M.COLMAN,E.HANDMAN JRNL TITL STRUCTURE OF LEISHMANIA MEXICANA PHOSPHOMANNOMUTASE JRNL TITL 2 HIGHLIGHTS SIMILARITIES WITH HUMAN ISOFORMS JRNL REF J.MOL.BIOL. V. 363 215 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 16963079 JRNL DOI 10.1016/J.JMB.2006.08.023 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 912 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1279 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5838 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.31000 REMARK 3 B22 (A**2) : -2.31000 REMARK 3 B33 (A**2) : 3.46000 REMARK 3 B12 (A**2) : -1.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.467 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.318 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 36.526 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6001 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5324 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8087 ; 1.371 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12433 ; 0.755 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 723 ; 6.663 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 315 ;39.138 ;24.571 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1062 ;17.965 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;13.264 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 865 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6699 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1266 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1431 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5701 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2935 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3705 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 167 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.145 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 65 ; 0.205 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.222 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4608 ; 0.404 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1494 ; 0.061 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5769 ; 0.503 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2777 ; 0.843 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2318 ; 1.315 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 85 REMARK 3 RESIDUE RANGE : A 186 A 245 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9664 10.6411 35.3052 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: -0.0144 REMARK 3 T33: -0.1360 T12: -0.0370 REMARK 3 T13: -0.1125 T23: -0.1802 REMARK 3 L TENSOR REMARK 3 L11: 10.0856 L22: 4.6446 REMARK 3 L33: 15.0669 L12: -0.4352 REMARK 3 L13: -3.2665 L23: 5.9385 REMARK 3 S TENSOR REMARK 3 S11: 0.3070 S12: -0.2107 S13: -0.4030 REMARK 3 S21: 0.8757 S22: 0.2932 S23: -0.4479 REMARK 3 S31: 1.5302 S32: 0.6537 S33: -0.6002 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4655 0.5797 47.7992 REMARK 3 T TENSOR REMARK 3 T11: -0.0995 T22: 0.2199 REMARK 3 T33: -0.1131 T12: 0.0850 REMARK 3 T13: 0.0012 T23: -0.3309 REMARK 3 L TENSOR REMARK 3 L11: 2.3865 L22: 5.5483 REMARK 3 L33: 6.3321 L12: 0.2557 REMARK 3 L13: 0.2922 L23: -3.8262 REMARK 3 S TENSOR REMARK 3 S11: 0.5345 S12: 0.4236 S13: 0.0300 REMARK 3 S21: -0.4459 S22: 0.0063 S23: 0.1014 REMARK 3 S31: 0.4221 S32: 1.0734 S33: -0.5408 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 85 REMARK 3 RESIDUE RANGE : B 186 B 245 REMARK 3 ORIGIN FOR THE GROUP (A): 53.7889 6.2765 -14.0529 REMARK 3 T TENSOR REMARK 3 T11: -0.0993 T22: -0.1868 REMARK 3 T33: -0.3525 T12: -0.0393 REMARK 3 T13: 0.0176 T23: -0.0736 REMARK 3 L TENSOR REMARK 3 L11: 4.1194 L22: 4.4454 REMARK 3 L33: 5.9200 L12: 1.6171 REMARK 3 L13: -0.0899 L23: -0.5095 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: 0.4661 S13: 0.1240 REMARK 3 S21: -0.7245 S22: 0.0951 S23: 0.2290 REMARK 3 S31: -0.1197 S32: -0.2033 S33: -0.0023 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 86 B 185 REMARK 3 ORIGIN FOR THE GROUP (A): 40.8864 11.1677 7.0362 REMARK 3 T TENSOR REMARK 3 T11: -0.2288 T22: -0.1737 REMARK 3 T33: -0.1444 T12: -0.1183 REMARK 3 T13: 0.0428 T23: -0.0801 REMARK 3 L TENSOR REMARK 3 L11: 7.4382 L22: 4.6340 REMARK 3 L33: 2.8637 L12: -0.7164 REMARK 3 L13: 0.5134 L23: 0.4048 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: -0.1321 S13: 1.1524 REMARK 3 S21: 0.2573 S22: -0.1391 S23: 0.2659 REMARK 3 S31: -0.3819 S32: 0.3659 S33: 0.0910 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 4 C 85 REMARK 3 RESIDUE RANGE : C 186 C 245 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0317 -5.3520 -13.8816 REMARK 3 T TENSOR REMARK 3 T11: -0.2099 T22: 0.0095 REMARK 3 T33: 0.1160 T12: 0.0504 REMARK 3 T13: -0.0240 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 5.2061 L22: 6.6193 REMARK 3 L33: 4.7838 L12: 1.2486 REMARK 3 L13: 1.2587 L23: 1.4468 REMARK 3 S TENSOR REMARK 3 S11: -0.1670 S12: 0.4525 S13: 0.2730 REMARK 3 S21: -0.4168 S22: -0.1563 S23: 0.0788 REMARK 3 S31: 0.2658 S32: 0.3751 S33: 0.3233 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 86 C 185 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0945 2.7662 8.1449 REMARK 3 T TENSOR REMARK 3 T11: -0.2463 T22: -0.2082 REMARK 3 T33: 0.0086 T12: -0.0530 REMARK 3 T13: 0.0690 T23: -0.1453 REMARK 3 L TENSOR REMARK 3 L11: 4.7946 L22: 5.7552 REMARK 3 L33: 1.8979 L12: 0.5132 REMARK 3 L13: -0.1495 L23: 1.3687 REMARK 3 S TENSOR REMARK 3 S11: 0.0423 S12: -0.2787 S13: 0.7249 REMARK 3 S21: 0.3457 S22: -0.2961 S23: 1.0903 REMARK 3 S31: -0.0495 S32: -0.1607 S33: 0.2538 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2I55 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000039149. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17996 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.31100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2I54 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% (W/V) PEG 3350, 10% PEG 400, 0.1M REMARK 280 CITRATE, 50% PEG 3550, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.60800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 115.21600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 115.21600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.60800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 115.21600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 246 REMARK 465 ARG A 247 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 246 REMARK 465 ARG B 247 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 SER C 3 REMARK 465 SER C 246 REMARK 465 ARG C 247 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 221 O HOH A 2003 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 10 170.20 -58.89 REMARK 500 VAL A 11 -82.48 -105.55 REMARK 500 ARG A 19 80.56 59.10 REMARK 500 ASP A 110 35.54 -99.11 REMARK 500 ARG A 115 -97.39 -123.73 REMARK 500 THR A 117 73.94 48.13 REMARK 500 ASN A 134 34.72 -85.84 REMARK 500 LYS A 184 115.62 -32.83 REMARK 500 LYS A 230 -74.51 -91.19 REMARK 500 VAL B 11 -84.24 -99.91 REMARK 500 ARG B 19 63.93 39.40 REMARK 500 SER B 58 7.21 -69.83 REMARK 500 ASN B 70 -0.23 72.94 REMARK 500 ARG B 115 -87.66 -126.57 REMARK 500 THR B 117 76.49 59.74 REMARK 500 THR C 14 -52.76 -144.62 REMARK 500 ILE C 59 -43.38 -29.83 REMARK 500 SER C 85 105.95 -162.52 REMARK 500 ASP C 110 69.76 -111.59 REMARK 500 ARG C 115 -91.74 -116.96 REMARK 500 THR C 117 81.26 50.81 REMARK 500 ARG C 122 -147.16 -96.60 REMARK 500 ASN C 134 41.79 -88.71 REMARK 500 ASP C 187 -179.11 -67.32 REMARK 500 VAL C 195 -42.78 -156.39 REMARK 500 LYS C 208 68.80 -105.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 ASP A 207 OD1 156.2 REMARK 620 3 ASP A 207 OD2 141.7 45.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 10 OD2 REMARK 620 2 ASP B 207 OD2 65.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2004 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 219 O REMARK 620 2 ASP B 221 O 133.7 REMARK 620 3 THR B 224 O 125.1 86.3 REMARK 620 4 ASN C 145 OD1 74.3 150.9 67.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C2003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 10 OD2 REMARK 620 2 ASP C 207 OD2 84.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C2005 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 219 O REMARK 620 2 ASP C 221 O 113.3 REMARK 620 3 THR C 224 O 123.1 83.6 REMARK 620 4 THR C 224 OG1 79.5 59.5 62.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2AMY RELATED DB: PDB REMARK 900 HUMAN PMM1 REMARK 900 RELATED ID: 2FUC RELATED DB: PDB REMARK 900 HUMAN PMM2 REMARK 900 RELATED ID: 2I54 RELATED DB: PDB REMARK 900 LEISHMANIA MEXICANA PMM DBREF 2I55 A 1 247 UNP Q95ZD7 Q95ZD7_LEIME 1 247 DBREF 2I55 B 1 247 UNP Q95ZD7 Q95ZD7_LEIME 1 247 DBREF 2I55 C 1 247 UNP Q95ZD7 Q95ZD7_LEIME 1 247 SEQRES 1 A 247 MET GLY SER LYS ALA ILE LEU LEU PHE ASP VAL ASP GLY SEQRES 2 A 247 THR LEU THR PRO PRO ARG ASN PRO GLU THR HIS ASP MET SEQRES 3 A 247 LYS GLU ALA LEU LEU LYS ALA ARG ALA ALA GLY PHE LYS SEQRES 4 A 247 LEU GLY VAL VAL GLY GLY SER ASP PHE ALA LYS GLN LYS SEQRES 5 A 247 GLU GLN LEU GLY GLU SER ILE LEU GLU ASP PHE ASP TYR SEQRES 6 A 247 VAL PHE SER GLU ASN GLY LEU LEU ALA TYR LYS ASP GLY SEQRES 7 A 247 LYS GLU PHE HIS ARG ASN SER LEU LEU ARG ALA LEU GLY SEQRES 8 A 247 ASN GLU LYS VAL VAL ALA PHE VAL LYS LYS CYS LEU HIS SEQRES 9 A 247 LEU ILE ALA ASP LEU ASP ILE PRO VAL GLN ARG GLY THR SEQRES 10 A 247 PHE VAL GLU PHE ARG ASN GLY MET PHE ASN VAL SER PRO SEQRES 11 A 247 ILE GLY ARG ASN CYS SER GLN GLN GLU ARG ASP GLU PHE SEQRES 12 A 247 GLU ASN LEU ASP LYS GLU ARG HIS ILE ARG GLU LYS LEU SEQRES 13 A 247 ILE ARG GLU LEU LYS GLU ALA PHE PRO ASP TYR GLN LEU SEQRES 14 A 247 ALA TYR SER VAL GLY GLY GLN ILE SER PHE ASP VAL PHE SEQRES 15 A 247 PRO LYS GLY TRP ASP LYS THR TYR CYS LEU GLN PHE VAL SEQRES 16 A 247 GLU ASN ASP PHE GLU THR ILE HIS PHE PHE GLY ASP LYS SEQRES 17 A 247 THR SER GLU GLY GLY ASN ASP TYR GLU ILE PHE THR ASP SEQRES 18 A 247 SER ARG THR ILE GLY HIS SER VAL LYS THR TYR LYS ASP SEQRES 19 A 247 THR ILE ALA ILE LEU GLU ALA LEU LEU GLU ASP SER ARG SEQRES 1 B 247 MET GLY SER LYS ALA ILE LEU LEU PHE ASP VAL ASP GLY SEQRES 2 B 247 THR LEU THR PRO PRO ARG ASN PRO GLU THR HIS ASP MET SEQRES 3 B 247 LYS GLU ALA LEU LEU LYS ALA ARG ALA ALA GLY PHE LYS SEQRES 4 B 247 LEU GLY VAL VAL GLY GLY SER ASP PHE ALA LYS GLN LYS SEQRES 5 B 247 GLU GLN LEU GLY GLU SER ILE LEU GLU ASP PHE ASP TYR SEQRES 6 B 247 VAL PHE SER GLU ASN GLY LEU LEU ALA TYR LYS ASP GLY SEQRES 7 B 247 LYS GLU PHE HIS ARG ASN SER LEU LEU ARG ALA LEU GLY SEQRES 8 B 247 ASN GLU LYS VAL VAL ALA PHE VAL LYS LYS CYS LEU HIS SEQRES 9 B 247 LEU ILE ALA ASP LEU ASP ILE PRO VAL GLN ARG GLY THR SEQRES 10 B 247 PHE VAL GLU PHE ARG ASN GLY MET PHE ASN VAL SER PRO SEQRES 11 B 247 ILE GLY ARG ASN CYS SER GLN GLN GLU ARG ASP GLU PHE SEQRES 12 B 247 GLU ASN LEU ASP LYS GLU ARG HIS ILE ARG GLU LYS LEU SEQRES 13 B 247 ILE ARG GLU LEU LYS GLU ALA PHE PRO ASP TYR GLN LEU SEQRES 14 B 247 ALA TYR SER VAL GLY GLY GLN ILE SER PHE ASP VAL PHE SEQRES 15 B 247 PRO LYS GLY TRP ASP LYS THR TYR CYS LEU GLN PHE VAL SEQRES 16 B 247 GLU ASN ASP PHE GLU THR ILE HIS PHE PHE GLY ASP LYS SEQRES 17 B 247 THR SER GLU GLY GLY ASN ASP TYR GLU ILE PHE THR ASP SEQRES 18 B 247 SER ARG THR ILE GLY HIS SER VAL LYS THR TYR LYS ASP SEQRES 19 B 247 THR ILE ALA ILE LEU GLU ALA LEU LEU GLU ASP SER ARG SEQRES 1 C 247 MET GLY SER LYS ALA ILE LEU LEU PHE ASP VAL ASP GLY SEQRES 2 C 247 THR LEU THR PRO PRO ARG ASN PRO GLU THR HIS ASP MET SEQRES 3 C 247 LYS GLU ALA LEU LEU LYS ALA ARG ALA ALA GLY PHE LYS SEQRES 4 C 247 LEU GLY VAL VAL GLY GLY SER ASP PHE ALA LYS GLN LYS SEQRES 5 C 247 GLU GLN LEU GLY GLU SER ILE LEU GLU ASP PHE ASP TYR SEQRES 6 C 247 VAL PHE SER GLU ASN GLY LEU LEU ALA TYR LYS ASP GLY SEQRES 7 C 247 LYS GLU PHE HIS ARG ASN SER LEU LEU ARG ALA LEU GLY SEQRES 8 C 247 ASN GLU LYS VAL VAL ALA PHE VAL LYS LYS CYS LEU HIS SEQRES 9 C 247 LEU ILE ALA ASP LEU ASP ILE PRO VAL GLN ARG GLY THR SEQRES 10 C 247 PHE VAL GLU PHE ARG ASN GLY MET PHE ASN VAL SER PRO SEQRES 11 C 247 ILE GLY ARG ASN CYS SER GLN GLN GLU ARG ASP GLU PHE SEQRES 12 C 247 GLU ASN LEU ASP LYS GLU ARG HIS ILE ARG GLU LYS LEU SEQRES 13 C 247 ILE ARG GLU LEU LYS GLU ALA PHE PRO ASP TYR GLN LEU SEQRES 14 C 247 ALA TYR SER VAL GLY GLY GLN ILE SER PHE ASP VAL PHE SEQRES 15 C 247 PRO LYS GLY TRP ASP LYS THR TYR CYS LEU GLN PHE VAL SEQRES 16 C 247 GLU ASN ASP PHE GLU THR ILE HIS PHE PHE GLY ASP LYS SEQRES 17 C 247 THR SER GLU GLY GLY ASN ASP TYR GLU ILE PHE THR ASP SEQRES 18 C 247 SER ARG THR ILE GLY HIS SER VAL LYS THR TYR LYS ASP SEQRES 19 C 247 THR ILE ALA ILE LEU GLU ALA LEU LEU GLU ASP SER ARG HET CL A1001 1 HET MG A2002 1 HET B16 B 249 20 HET MG B2001 1 HET MG B2004 1 HET B16 C1249 20 HET CL C1002 1 HET MG C2003 1 HET MG C2005 1 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM B16 1,6-DI-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE HETSYN B16 1,6-DI-O-PHOSPHONO-BETA-D-GLUCOSE; 1,6-DI-O-PHOSPHONO- HETSYN 2 B16 D-GLUCOSE; 1,6-DI-O-PHOSPHONO-GLUCOSE FORMUL 4 CL 2(CL 1-) FORMUL 5 MG 5(MG 2+) FORMUL 6 B16 2(C6 H14 O12 P2) FORMUL 13 HOH *18(H2 O) HELIX 1 1 THR A 23 ALA A 36 1 14 HELIX 2 2 ASP A 47 GLY A 56 1 10 HELIX 3 3 SER A 58 PHE A 63 1 6 HELIX 4 4 SER A 85 GLY A 91 1 7 HELIX 5 5 GLY A 91 ASP A 108 1 18 HELIX 6 6 SER A 136 HIS A 151 1 16 HELIX 7 7 HIS A 151 PHE A 164 1 14 HELIX 8 8 PRO A 165 TYR A 167 5 3 HELIX 9 9 ASP A 187 TYR A 190 5 4 HELIX 10 10 CYS A 191 GLU A 196 1 6 HELIX 11 11 ASN A 197 PHE A 199 5 3 HELIX 12 12 ASP A 215 ASP A 221 1 7 HELIX 13 13 THR A 231 ASP A 245 1 15 HELIX 14 14 THR B 23 ALA B 36 1 14 HELIX 15 15 ASP B 47 GLY B 56 1 10 HELIX 16 16 SER B 58 PHE B 63 1 6 HELIX 17 17 GLU B 69 GLY B 71 5 3 HELIX 18 18 SER B 85 ALA B 107 1 23 HELIX 19 19 SER B 136 HIS B 151 1 16 HELIX 20 20 HIS B 151 PHE B 164 1 14 HELIX 21 21 PRO B 165 TYR B 167 5 3 HELIX 22 22 ASP B 187 VAL B 195 5 9 HELIX 23 23 ASP B 215 THR B 220 1 6 HELIX 24 24 THR B 231 LEU B 243 1 13 HELIX 25 25 THR C 23 ALA C 36 1 14 HELIX 26 26 ASP C 47 GLY C 56 1 10 HELIX 27 27 GLU C 57 ASP C 62 5 6 HELIX 28 28 SER C 85 LEU C 109 1 25 HELIX 29 29 SER C 136 HIS C 151 1 16 HELIX 30 30 HIS C 151 PHE C 164 1 14 HELIX 31 31 ASP C 187 VAL C 195 5 9 HELIX 32 32 ASP C 215 ASP C 221 1 7 HELIX 33 33 THR C 231 ASP C 245 1 15 SHEET 1 A 7 LYS A 79 ARG A 83 0 SHEET 2 A 7 LEU A 73 LYS A 76 -1 N ALA A 74 O PHE A 81 SHEET 3 A 7 TYR A 65 SER A 68 -1 N VAL A 66 O TYR A 75 SHEET 4 A 7 LYS A 39 GLY A 44 1 N VAL A 42 O PHE A 67 SHEET 5 A 7 ALA A 5 PHE A 9 1 N LEU A 7 O LYS A 39 SHEET 6 A 7 THR A 201 GLY A 206 1 O HIS A 203 N LEU A 8 SHEET 7 A 7 ILE A 225 SER A 228 1 O ILE A 225 N ILE A 202 SHEET 1 B 4 VAL A 119 ARG A 122 0 SHEET 2 B 4 MET A 125 VAL A 128 -1 O ASN A 127 N GLU A 120 SHEET 3 B 4 PHE A 179 PRO A 183 -1 O PHE A 179 N VAL A 128 SHEET 4 B 4 LEU A 169 VAL A 173 -1 N SER A 172 O ASP A 180 SHEET 1 C 7 LYS B 79 ARG B 83 0 SHEET 2 C 7 LEU B 73 LYS B 76 -1 N ALA B 74 O PHE B 81 SHEET 3 C 7 TYR B 65 SER B 68 -1 N VAL B 66 O TYR B 75 SHEET 4 C 7 LYS B 39 VAL B 43 1 N VAL B 42 O PHE B 67 SHEET 5 C 7 ALA B 5 PHE B 9 1 N PHE B 9 O GLY B 41 SHEET 6 C 7 THR B 201 GLY B 206 1 O HIS B 203 N LEU B 8 SHEET 7 C 7 ILE B 225 SER B 228 1 O HIS B 227 N PHE B 204 SHEET 1 D 4 VAL B 119 PHE B 121 0 SHEET 2 D 4 PHE B 126 VAL B 128 -1 O ASN B 127 N GLU B 120 SHEET 3 D 4 PHE B 179 PRO B 183 -1 O VAL B 181 N PHE B 126 SHEET 4 D 4 LEU B 169 SER B 172 -1 N SER B 172 O ASP B 180 SHEET 1 E 7 LYS C 79 ARG C 83 0 SHEET 2 E 7 LEU C 73 LYS C 76 -1 N LYS C 76 O LYS C 79 SHEET 3 E 7 TYR C 65 SER C 68 -1 N VAL C 66 O TYR C 75 SHEET 4 E 7 LYS C 39 GLY C 44 1 N VAL C 42 O PHE C 67 SHEET 5 E 7 ILE C 6 ASP C 10 1 N PHE C 9 O VAL C 43 SHEET 6 E 7 ILE C 202 GLY C 206 1 O HIS C 203 N LEU C 8 SHEET 7 E 7 ILE C 225 SER C 228 1 O HIS C 227 N PHE C 204 SHEET 1 F 4 VAL C 119 PHE C 121 0 SHEET 2 F 4 PHE C 126 VAL C 128 -1 O ASN C 127 N GLU C 120 SHEET 3 F 4 PHE C 179 PRO C 183 -1 O VAL C 181 N PHE C 126 SHEET 4 F 4 LEU C 169 SER C 172 -1 N SER C 172 O ASP C 180 LINK OD2 ASP A 10 MG MG A2002 1555 1555 2.13 LINK OD1 ASP A 207 MG MG A2002 1555 1555 3.04 LINK OD2 ASP A 207 MG MG A2002 1555 1555 2.10 LINK OD2 ASP B 10 MG MG B2001 1555 1555 2.59 LINK OD2 ASP B 207 MG MG B2001 1555 1555 2.86 LINK O PHE B 219 MG MG B2004 1555 1555 2.35 LINK O ASP B 221 MG MG B2004 1555 1555 2.23 LINK O THR B 224 MG MG B2004 1555 1555 2.67 LINK MG MG B2004 OD1 ASN C 145 1555 4655 2.61 LINK OD2 ASP C 10 MG MG C2003 1555 1555 2.07 LINK OD2 ASP C 207 MG MG C2003 1555 1555 2.48 LINK O PHE C 219 MG MG C2005 1555 1555 2.22 LINK O ASP C 221 MG MG C2005 1555 1555 2.43 LINK O THR C 224 MG MG C2005 1555 1555 3.09 LINK OG1 THR C 224 MG MG C2005 1555 1555 2.59 CRYST1 92.224 92.224 172.824 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010843 0.006260 0.000000 0.00000 SCALE2 0.000000 0.012521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005786 0.00000