data_2I61 # _entry.id 2I61 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2I61 pdb_00002i61 10.2210/pdb2i61/pdb RCSB RCSB039181 ? ? WWPDB D_1000039181 ? ? # _pdbx_database_status.entry_id 2I61 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-08-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Frolow, F.' 1 'Gurevitz, M.' 2 'Karbat, I.' 3 'Turkov, M.' 4 'Gordon, D.' 5 # _citation.id primary _citation.title ;X-ray Structure and Mutagenesis of the Scorpion Depressant Toxin LqhIT2 Reveals Key Determinants Crucial for Activity and Anti-Insect Selectivity. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 366 _citation.page_first 586 _citation.page_last 601 _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17166514 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2006.10.085 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Karbat, I.' 1 ? primary 'Turkov, M.' 2 ? primary 'Cohen, L.' 3 ? primary 'Kahn, R.' 4 ? primary 'Gordon, D.' 5 ? primary 'Gurevitz, M.' 6 ? primary 'Frolow, F.' 7 ? # _cell.entry_id 2I61 _cell.length_a 19.660 _cell.length_b 51.423 _cell.length_c 28.917 _cell.angle_alpha 90.00 _cell.angle_beta 107.75 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2I61 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Insect toxin 2' 6905.811 1 ? ? 'Peptide modifier of voltage-gated sodium channels' ? 2 non-polymer syn 'LITHIUM ION' 6.941 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 non-polymer syn 'CARBON DIOXIDE' 44.010 1 ? ? ? ? 6 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 7 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lqh IT2, LqhIT2, LqhIT2-44, anti-insect depressant neurotoxin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MDGYIKRRDGCKVACLIGNEGCDKECKAYGGSYGYCWTWGLACWCEGLPDDKTWKSETNTCG _entity_poly.pdbx_seq_one_letter_code_can MDGYIKRRDGCKVACLIGNEGCDKECKAYGGSYGYCWTWGLACWCEGLPDDKTWKSETNTCG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 GLY n 1 4 TYR n 1 5 ILE n 1 6 LYS n 1 7 ARG n 1 8 ARG n 1 9 ASP n 1 10 GLY n 1 11 CYS n 1 12 LYS n 1 13 VAL n 1 14 ALA n 1 15 CYS n 1 16 LEU n 1 17 ILE n 1 18 GLY n 1 19 ASN n 1 20 GLU n 1 21 GLY n 1 22 CYS n 1 23 ASP n 1 24 LYS n 1 25 GLU n 1 26 CYS n 1 27 LYS n 1 28 ALA n 1 29 TYR n 1 30 GLY n 1 31 GLY n 1 32 SER n 1 33 TYR n 1 34 GLY n 1 35 TYR n 1 36 CYS n 1 37 TRP n 1 38 THR n 1 39 TRP n 1 40 GLY n 1 41 LEU n 1 42 ALA n 1 43 CYS n 1 44 TRP n 1 45 CYS n 1 46 GLU n 1 47 GLY n 1 48 LEU n 1 49 PRO n 1 50 ASP n 1 51 ASP n 1 52 LYS n 1 53 THR n 1 54 TRP n 1 55 LYS n 1 56 SER n 1 57 GLU n 1 58 THR n 1 59 ASN n 1 60 THR n 1 61 CYS n 1 62 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Leiurus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Leiurus quinquestriatus' _entity_src_gen.gene_src_strain hebraeus _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Leiurus quinquestriatus hebraeus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6884 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11c _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SIX2_LEIQH _struct_ref.pdbx_db_accession Q26292 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DGYIKRRDGCKVACLIGNEGCDKECKAYGGSYGYCWTWGLACWCEGLPDDKTWKSETNTCG _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2I61 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 62 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q26292 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 82 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 61 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2I61 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q26292 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CO2 non-polymer . 'CARBON DIOXIDE' ? 'C O2' 44.010 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LI non-polymer . 'LITHIUM ION' ? 'Li 1' 6.941 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2I61 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;protein concentration 8mg/ml, precepitant 1.5 M LiSO4, buffer 0.1 M NA, HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-12-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0052 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0052 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 # _reflns.entry_id 2I61 _reflns.d_resolution_high 1.200 _reflns.d_resolution_low 50.000 _reflns.number_obs 16312 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_netI_over_sigmaI 43.63 _reflns.pdbx_chi_squared 2.619 _reflns.pdbx_redundancy 3.100 _reflns.percent_possible_obs 94.700 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I -3.000 _reflns.number_all 16312 _reflns.pdbx_Rsym_value 0.038 _reflns.B_iso_Wilson_estimate 6.81 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.22 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.046 _reflns_shell.meanI_over_sigI_obs 22.77 _reflns_shell.pdbx_Rsym_value 0.046 _reflns_shell.pdbx_chi_squared 1.512 _reflns_shell.pdbx_redundancy 2.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 773 _reflns_shell.percent_possible_all 90.50 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2I61 _refine.ls_d_res_high 1.200 _refine.ls_d_res_low 27.540 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 94.680 _refine.ls_number_reflns_obs 16246 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.097 _refine.ls_R_factor_R_work 0.096 _refine.ls_R_factor_R_free 0.12 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 830 _refine.B_iso_mean 8.216 _refine.aniso_B[1][1] -0.350 _refine.aniso_B[2][2] 0.560 _refine.aniso_B[3][3] -0.270 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.100 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.982 _refine.correlation_coeff_Fo_to_Fc_free 0.976 _refine.pdbx_overall_ESU_R 0.030 _refine.pdbx_overall_ESU_R_Free 0.030 _refine.overall_SU_ML 0.014 _refine.overall_SU_B 0.659 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I -3.00 _refine.ls_number_reflns_all 16312 _refine.ls_R_factor_obs 0.097 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 2SN3' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Anisotropic _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 501 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 618 _refine_hist.d_res_high 1.200 _refine_hist.d_res_low 27.540 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 543 0.015 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 390 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 728 1.659 1.965 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 932 0.927 3.017 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 67 5.479 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 22 30.911 24.091 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 90 12.916 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 2.314 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 66 0.121 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 595 0.009 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 111 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 110 0.262 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 383 0.194 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 256 0.191 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 296 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 48 0.229 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 9 0.095 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 23 0.228 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 45 0.291 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 18 0.248 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 3 0.110 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 415 3.387 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 138 1.526 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 497 3.741 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 291 5.642 7.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 227 6.555 10.000 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1244 2.611 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 89 13.164 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 919 5.060 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.200 _refine_ls_shell.d_res_low 1.231 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 90.840 _refine_ls_shell.number_reflns_R_work 1090 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.067 _refine_ls_shell.R_factor_R_free 0.098 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1150 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2I61 _struct.title 'Depressant anti-insect neurotoxin, LqhIT2 from Leiurus quinquestriatus hebraeus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2I61 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'Scorpion toxin, depressant, anti-insect, sodium channel modifer, TOXIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 7 ? # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 18 ? TYR A 29 ? GLY A 17 TYR A 28 1 ? 12 HELX_P HELX_P2 2 PRO A 49 ? THR A 53 ? PRO A 48 THR A 52 5 ? 5 HELX_P HELX_P3 3 LYS A 55 ? ASN A 59 ? LYS A 54 ASN A 58 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 61 SG ? ? A CYS 10 A CYS 60 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf2 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 36 SG ? ? A CYS 14 A CYS 35 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf3 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 21 A CYS 42 1_555 ? ? ? ? ? ? ? 2.078 ? ? disulf4 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 25 A CYS 44 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc1 metalc ? ? A ASP 9 O ? ? ? 1_555 C LI . LI ? ? A ASP 8 A LI 63 1_555 ? ? ? ? ? ? ? 1.898 ? ? metalc2 metalc ? ? A GLU 20 OE1 ? ? ? 1_656 C LI . LI ? ? A GLU 19 A LI 63 1_555 ? ? ? ? ? ? ? 1.960 ? ? metalc3 metalc ? ? A LYS 27 O ? ? ? 1_555 D LI . LI ? ? A LYS 26 A LI 64 1_555 ? ? ? ? ? ? ? 1.902 ? ? metalc4 metalc ? ? A TRP 37 O ? ? ? 1_555 B LI . LI ? ? A TRP 36 A LI 62 1_555 ? ? ? ? ? ? ? 1.973 ? ? metalc5 metalc ? ? A THR 60 O ? ? ? 1_555 C LI . LI ? ? A THR 59 A LI 63 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc6 metalc ? ? B LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 62 A HOH 74 1_554 ? ? ? ? ? ? ? 1.893 ? ? metalc7 metalc ? ? B LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 62 A HOH 83 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc8 metalc ? ? B LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 62 A HOH 84 1_655 ? ? ? ? ? ? ? 1.868 ? ? metalc9 metalc ? ? C LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 63 A HOH 79 1_555 ? ? ? ? ? ? ? 1.938 ? ? metalc10 metalc ? ? D LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 64 A HOH 88 1_555 ? ? ? ? ? ? ? 1.851 ? ? metalc11 metalc ? ? D LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 64 A HOH 109 1_555 ? ? ? ? ? ? ? 1.877 ? ? metalc12 metalc ? ? D LI . LI ? ? ? 1_555 K HOH . O ? ? A LI 64 A HOH 151 1_555 ? ? ? ? ? ? ? 1.941 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 33 ? TYR A 35 ? TYR A 32 TYR A 34 A 2 TRP A 44 ? GLU A 46 ? TRP A 43 GLU A 45 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TYR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 33 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 32 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLU _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 46 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLU _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 45 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A LI 62 ? 5 'BINDING SITE FOR RESIDUE LI A 62' AC2 Software A LI 63 ? 4 'BINDING SITE FOR RESIDUE LI A 63' AC3 Software A LI 64 ? 4 'BINDING SITE FOR RESIDUE LI A 64' AC4 Software A SO4 65 ? 11 'BINDING SITE FOR RESIDUE SO4 A 65' AC5 Software A EDO 66 ? 3 'BINDING SITE FOR RESIDUE EDO A 66' AC6 Software A EDO 67 ? 9 'BINDING SITE FOR RESIDUE EDO A 67' AC7 Software A EDO 68 ? 4 'BINDING SITE FOR RESIDUE EDO A 68' AC8 Software A CO2 69 ? 4 'BINDING SITE FOR RESIDUE CO2 A 69' AC9 Software A ACY 70 ? 8 'BINDING SITE FOR RESIDUE ACY A 70' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 9 ? ASP A 8 . ? 1_554 ? 2 AC1 5 TRP A 37 ? TRP A 36 . ? 1_555 ? 3 AC1 5 HOH K . ? HOH A 74 . ? 1_554 ? 4 AC1 5 HOH K . ? HOH A 83 . ? 1_555 ? 5 AC1 5 HOH K . ? HOH A 84 . ? 1_655 ? 6 AC2 4 ASP A 9 ? ASP A 8 . ? 1_555 ? 7 AC2 4 GLU A 20 ? GLU A 19 . ? 1_656 ? 8 AC2 4 THR A 60 ? THR A 59 . ? 1_555 ? 9 AC2 4 HOH K . ? HOH A 79 . ? 1_555 ? 10 AC3 4 LYS A 27 ? LYS A 26 . ? 1_555 ? 11 AC3 4 HOH K . ? HOH A 88 . ? 1_555 ? 12 AC3 4 HOH K . ? HOH A 109 . ? 1_555 ? 13 AC3 4 HOH K . ? HOH A 151 . ? 1_555 ? 14 AC4 11 ARG A 8 ? ARG A 7 . ? 1_655 ? 15 AC4 11 ASN A 19 ? ASN A 18 . ? 1_656 ? 16 AC4 11 ASN A 59 ? ASN A 58 . ? 1_555 ? 17 AC4 11 HOH K . ? HOH A 74 . ? 1_655 ? 18 AC4 11 HOH K . ? HOH A 82 . ? 1_655 ? 19 AC4 11 HOH K . ? HOH A 99 . ? 1_655 ? 20 AC4 11 HOH K . ? HOH A 102 . ? 1_655 ? 21 AC4 11 HOH K . ? HOH A 127 . ? 1_655 ? 22 AC4 11 HOH K . ? HOH A 133 . ? 1_656 ? 23 AC4 11 HOH K . ? HOH A 139 . ? 1_655 ? 24 AC4 11 HOH K . ? HOH A 150 . ? 1_555 ? 25 AC5 3 GLY A 62 ? GLY A 61 . ? 1_454 ? 26 AC5 3 HOH K . ? HOH A 99 . ? 1_554 ? 27 AC5 3 HOH K . ? HOH A 133 . ? 1_555 ? 28 AC6 9 LYS A 6 ? LYS A 5 . ? 1_555 ? 29 AC6 9 ASP A 23 ? ASP A 22 . ? 1_656 ? 30 AC6 9 LYS A 27 ? LYS A 26 . ? 1_656 ? 31 AC6 9 TYR A 33 ? TYR A 32 . ? 1_656 ? 32 AC6 9 THR A 58 ? THR A 57 . ? 1_555 ? 33 AC6 9 THR A 60 ? THR A 59 . ? 1_555 ? 34 AC6 9 HOH K . ? HOH A 94 . ? 1_555 ? 35 AC6 9 HOH K . ? HOH A 120 . ? 1_656 ? 36 AC6 9 HOH K . ? HOH A 155 . ? 1_656 ? 37 AC7 4 MET A 1 ? MET A 0 . ? 1_455 ? 38 AC7 4 TYR A 29 ? TYR A 28 . ? 1_555 ? 39 AC7 4 LYS A 52 ? LYS A 51 . ? 1_555 ? 40 AC7 4 GLU A 57 ? GLU A 56 . ? 1_455 ? 41 AC8 4 CYS A 11 ? CYS A 10 . ? 1_555 ? 42 AC8 4 LYS A 12 ? LYS A 11 . ? 1_555 ? 43 AC8 4 TRP A 54 ? TRP A 53 . ? 1_555 ? 44 AC8 4 CYS A 61 ? CYS A 60 . ? 1_555 ? 45 AC9 8 LYS A 6 ? LYS A 5 . ? 1_555 ? 46 AC9 8 ARG A 7 ? ARG A 6 . ? 1_555 ? 47 AC9 8 ARG A 8 ? ARG A 7 . ? 1_555 ? 48 AC9 8 TYR A 29 ? TYR A 28 . ? 1_555 ? 49 AC9 8 ASP A 51 ? ASP A 50 . ? 1_555 ? 50 AC9 8 LYS A 52 ? LYS A 51 . ? 1_555 ? 51 AC9 8 SER A 56 ? SER A 55 . ? 1_455 ? 52 AC9 8 HOH K . ? HOH A 134 . ? 1_455 ? # _atom_sites.entry_id 2I61 _atom_sites.fract_transf_matrix[1][1] 0.050865 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.016282 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019447 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.036310 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C LI N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 ASP 2 1 1 ASP ASP A . n A 1 3 GLY 3 2 2 GLY GLY A . n A 1 4 TYR 4 3 3 TYR TYR A . n A 1 5 ILE 5 4 4 ILE ILE A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 ARG 7 6 6 ARG ARG A . n A 1 8 ARG 8 7 7 ARG ARG A . n A 1 9 ASP 9 8 8 ASP ASP A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 CYS 11 10 10 CYS CYS A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 CYS 15 14 14 CYS CYS A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 CYS 22 21 21 CYS CYS A . n A 1 23 ASP 23 22 22 ASP ASP A . n A 1 24 LYS 24 23 23 LYS LYS A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 CYS 26 25 25 CYS CYS A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 TYR 33 32 32 TYR TYR A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 TYR 35 34 34 TYR TYR A . n A 1 36 CYS 36 35 35 CYS CYS A . n A 1 37 TRP 37 36 36 TRP TRP A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 TRP 39 38 38 TRP TRP A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 CYS 43 42 42 CYS CYS A . n A 1 44 TRP 44 43 43 TRP TRP A . n A 1 45 CYS 45 44 44 CYS CYS A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 PRO 49 48 48 PRO PRO A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 LYS 52 51 51 LYS LYS A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 TRP 54 53 53 TRP TRP A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 ASN 59 58 58 ASN ASN A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 CYS 61 60 60 CYS CYS A . n A 1 62 GLY 62 61 61 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LI 1 62 1 LI LI A . C 2 LI 1 63 2 LI LI A . D 2 LI 1 64 3 LI LI A . E 3 SO4 1 65 4 SO4 SO4 A . F 4 EDO 1 66 5 EDO EDO A . G 4 EDO 1 67 6 EDO EDO A . H 4 EDO 1 68 7 EDO EDO A . I 5 CO2 1 69 8 CO2 CO2 A . J 6 ACY 1 70 9 ACY ACY A . K 7 HOH 1 71 62 HOH HOH A . K 7 HOH 2 72 63 HOH HOH A . K 7 HOH 3 73 64 HOH HOH A . K 7 HOH 4 74 65 HOH HOH A . K 7 HOH 5 75 66 HOH HOH A . K 7 HOH 6 76 67 HOH HOH A . K 7 HOH 7 77 68 HOH HOH A . K 7 HOH 8 78 69 HOH HOH A . K 7 HOH 9 79 71 HOH HOH A . K 7 HOH 10 80 72 HOH HOH A . K 7 HOH 11 81 73 HOH HOH A . K 7 HOH 12 82 75 HOH HOH A . K 7 HOH 13 83 76 HOH HOH A . K 7 HOH 14 84 77 HOH HOH A . K 7 HOH 15 85 79 HOH HOH A . K 7 HOH 16 86 80 HOH HOH A . K 7 HOH 17 87 82 HOH HOH A . K 7 HOH 18 88 83 HOH HOH A . K 7 HOH 19 89 84 HOH HOH A . K 7 HOH 20 90 85 HOH HOH A . K 7 HOH 21 91 87 HOH HOH A . K 7 HOH 22 92 88 HOH HOH A . K 7 HOH 23 93 89 HOH HOH A . K 7 HOH 24 94 90 HOH HOH A . K 7 HOH 25 95 91 HOH HOH A . K 7 HOH 26 96 93 HOH HOH A . K 7 HOH 27 97 94 HOH HOH A . K 7 HOH 28 98 95 HOH HOH A . K 7 HOH 29 99 96 HOH HOH A . K 7 HOH 30 100 97 HOH HOH A . K 7 HOH 31 101 98 HOH HOH A . K 7 HOH 32 102 99 HOH HOH A . K 7 HOH 33 103 100 HOH HOH A . K 7 HOH 34 104 101 HOH HOH A . K 7 HOH 35 105 102 HOH HOH A . K 7 HOH 36 106 103 HOH HOH A . K 7 HOH 37 107 104 HOH HOH A . K 7 HOH 38 108 105 HOH HOH A . K 7 HOH 39 109 106 HOH HOH A . K 7 HOH 40 110 107 HOH HOH A . K 7 HOH 41 111 108 HOH HOH A . K 7 HOH 42 112 114 HOH HOH A . K 7 HOH 43 113 116 HOH HOH A . K 7 HOH 44 114 117 HOH HOH A . K 7 HOH 45 115 118 HOH HOH A . K 7 HOH 46 116 119 HOH HOH A . K 7 HOH 47 117 120 HOH HOH A . K 7 HOH 48 118 123 HOH HOH A . K 7 HOH 49 119 124 HOH HOH A . K 7 HOH 50 120 126 HOH HOH A . K 7 HOH 51 121 127 HOH HOH A . K 7 HOH 52 122 128 HOH HOH A . K 7 HOH 53 123 129 HOH HOH A . K 7 HOH 54 124 130 HOH HOH A . K 7 HOH 55 125 131 HOH HOH A . K 7 HOH 56 126 132 HOH HOH A . K 7 HOH 57 127 134 HOH HOH A . K 7 HOH 58 128 136 HOH HOH A . K 7 HOH 59 129 137 HOH HOH A . K 7 HOH 60 130 139 HOH HOH A . K 7 HOH 61 131 140 HOH HOH A . K 7 HOH 62 132 142 HOH HOH A . K 7 HOH 63 133 143 HOH HOH A . K 7 HOH 64 134 144 HOH HOH A . K 7 HOH 65 135 145 HOH HOH A . K 7 HOH 66 136 146 HOH HOH A . K 7 HOH 67 137 148 HOH HOH A . K 7 HOH 68 138 149 HOH HOH A . K 7 HOH 69 139 150 HOH HOH A . K 7 HOH 70 140 151 HOH HOH A . K 7 HOH 71 141 152 HOH HOH A . K 7 HOH 72 142 154 HOH HOH A . K 7 HOH 73 143 156 HOH HOH A . K 7 HOH 74 144 157 HOH HOH A . K 7 HOH 75 145 158 HOH HOH A . K 7 HOH 76 146 159 HOH HOH A . K 7 HOH 77 147 160 HOH HOH A . K 7 HOH 78 148 161 HOH HOH A . K 7 HOH 79 149 162 HOH HOH A . K 7 HOH 80 150 163 HOH HOH A . K 7 HOH 81 151 201 HOH HOH A . K 7 HOH 82 152 202 HOH HOH A . K 7 HOH 83 153 203 HOH HOH A . K 7 HOH 84 154 204 HOH HOH A . K 7 HOH 85 155 205 HOH HOH A . K 7 HOH 86 156 206 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 9 ? A ASP 8 ? 1_555 LI ? C LI . ? A LI 63 ? 1_555 OE1 ? A GLU 20 ? A GLU 19 ? 1_656 107.0 ? 2 O ? A ASP 9 ? A ASP 8 ? 1_555 LI ? C LI . ? A LI 63 ? 1_555 O ? A THR 60 ? A THR 59 ? 1_555 103.9 ? 3 OE1 ? A GLU 20 ? A GLU 19 ? 1_656 LI ? C LI . ? A LI 63 ? 1_555 O ? A THR 60 ? A THR 59 ? 1_555 122.3 ? 4 O ? A ASP 9 ? A ASP 8 ? 1_555 LI ? C LI . ? A LI 63 ? 1_555 O ? K HOH . ? A HOH 79 ? 1_555 121.1 ? 5 OE1 ? A GLU 20 ? A GLU 19 ? 1_656 LI ? C LI . ? A LI 63 ? 1_555 O ? K HOH . ? A HOH 79 ? 1_555 107.2 ? 6 O ? A THR 60 ? A THR 59 ? 1_555 LI ? C LI . ? A LI 63 ? 1_555 O ? K HOH . ? A HOH 79 ? 1_555 96.2 ? 7 O ? A LYS 27 ? A LYS 26 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 88 ? 1_555 108.9 ? 8 O ? A LYS 27 ? A LYS 26 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 109 ? 1_555 110.5 ? 9 O ? K HOH . ? A HOH 88 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 109 ? 1_555 108.7 ? 10 O ? A LYS 27 ? A LYS 26 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 151 ? 1_555 113.1 ? 11 O ? K HOH . ? A HOH 88 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 151 ? 1_555 109.1 ? 12 O ? K HOH . ? A HOH 109 ? 1_555 LI ? D LI . ? A LI 64 ? 1_555 O ? K HOH . ? A HOH 151 ? 1_555 106.3 ? 13 O ? A TRP 37 ? A TRP 36 ? 1_555 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 74 ? 1_554 117.6 ? 14 O ? A TRP 37 ? A TRP 36 ? 1_555 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 83 ? 1_555 98.8 ? 15 O ? K HOH . ? A HOH 74 ? 1_554 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 83 ? 1_555 108.9 ? 16 O ? A TRP 37 ? A TRP 36 ? 1_555 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 84 ? 1_655 103.4 ? 17 O ? K HOH . ? A HOH 74 ? 1_554 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 84 ? 1_655 111.8 ? 18 O ? K HOH . ? A HOH 83 ? 1_555 LI ? B LI . ? A LI 62 ? 1_555 O ? K HOH . ? A HOH 84 ? 1_655 115.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-26 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 28 5 'Structure model' '_pdbx_struct_conn_angle.value' 29 5 'Structure model' '_struct_conn.pdbx_dist_value' 30 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 31 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 36 5 'Structure model' '_struct_conn.ptnr1_symmetry' 37 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 43 5 'Structure model' '_struct_conn.ptnr2_symmetry' 44 5 'Structure model' '_struct_ref_seq_dif.details' 45 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 46 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 47 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 2I61 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.000 _pdbx_phasing_MR.d_res_low_rotation 27.540 _pdbx_phasing_MR.d_res_high_translation 4.000 _pdbx_phasing_MR.d_res_low_translation 27.540 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MOLREP . ? other 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 ProDC . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 EDO _pdbx_validate_close_contact.auth_seq_id_1 66 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 133 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 99 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 133 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 1.89 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 50 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 50 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 50 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.76 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.46 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ILE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 16 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -120.07 _pdbx_validate_torsion.psi -57.04 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 CO2 C C N N 82 CO2 O1 O N N 83 CO2 O2 O N N 84 CYS N N N N 85 CYS CA C N R 86 CYS C C N N 87 CYS O O N N 88 CYS CB C N N 89 CYS SG S N N 90 CYS OXT O N N 91 CYS H H N N 92 CYS H2 H N N 93 CYS HA H N N 94 CYS HB2 H N N 95 CYS HB3 H N N 96 CYS HG H N N 97 CYS HXT H N N 98 EDO C1 C N N 99 EDO O1 O N N 100 EDO C2 C N N 101 EDO O2 O N N 102 EDO H11 H N N 103 EDO H12 H N N 104 EDO HO1 H N N 105 EDO H21 H N N 106 EDO H22 H N N 107 EDO HO2 H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HOH O O N N 138 HOH H1 H N N 139 HOH H2 H N N 140 ILE N N N N 141 ILE CA C N S 142 ILE C C N N 143 ILE O O N N 144 ILE CB C N S 145 ILE CG1 C N N 146 ILE CG2 C N N 147 ILE CD1 C N N 148 ILE OXT O N N 149 ILE H H N N 150 ILE H2 H N N 151 ILE HA H N N 152 ILE HB H N N 153 ILE HG12 H N N 154 ILE HG13 H N N 155 ILE HG21 H N N 156 ILE HG22 H N N 157 ILE HG23 H N N 158 ILE HD11 H N N 159 ILE HD12 H N N 160 ILE HD13 H N N 161 ILE HXT H N N 162 LEU N N N N 163 LEU CA C N S 164 LEU C C N N 165 LEU O O N N 166 LEU CB C N N 167 LEU CG C N N 168 LEU CD1 C N N 169 LEU CD2 C N N 170 LEU OXT O N N 171 LEU H H N N 172 LEU H2 H N N 173 LEU HA H N N 174 LEU HB2 H N N 175 LEU HB3 H N N 176 LEU HG H N N 177 LEU HD11 H N N 178 LEU HD12 H N N 179 LEU HD13 H N N 180 LEU HD21 H N N 181 LEU HD22 H N N 182 LEU HD23 H N N 183 LEU HXT H N N 184 LI LI LI N N 185 LYS N N N N 186 LYS CA C N S 187 LYS C C N N 188 LYS O O N N 189 LYS CB C N N 190 LYS CG C N N 191 LYS CD C N N 192 LYS CE C N N 193 LYS NZ N N N 194 LYS OXT O N N 195 LYS H H N N 196 LYS H2 H N N 197 LYS HA H N N 198 LYS HB2 H N N 199 LYS HB3 H N N 200 LYS HG2 H N N 201 LYS HG3 H N N 202 LYS HD2 H N N 203 LYS HD3 H N N 204 LYS HE2 H N N 205 LYS HE3 H N N 206 LYS HZ1 H N N 207 LYS HZ2 H N N 208 LYS HZ3 H N N 209 LYS HXT H N N 210 MET N N N N 211 MET CA C N S 212 MET C C N N 213 MET O O N N 214 MET CB C N N 215 MET CG C N N 216 MET SD S N N 217 MET CE C N N 218 MET OXT O N N 219 MET H H N N 220 MET H2 H N N 221 MET HA H N N 222 MET HB2 H N N 223 MET HB3 H N N 224 MET HG2 H N N 225 MET HG3 H N N 226 MET HE1 H N N 227 MET HE2 H N N 228 MET HE3 H N N 229 MET HXT H N N 230 PRO N N N N 231 PRO CA C N S 232 PRO C C N N 233 PRO O O N N 234 PRO CB C N N 235 PRO CG C N N 236 PRO CD C N N 237 PRO OXT O N N 238 PRO H H N N 239 PRO HA H N N 240 PRO HB2 H N N 241 PRO HB3 H N N 242 PRO HG2 H N N 243 PRO HG3 H N N 244 PRO HD2 H N N 245 PRO HD3 H N N 246 PRO HXT H N N 247 SER N N N N 248 SER CA C N S 249 SER C C N N 250 SER O O N N 251 SER CB C N N 252 SER OG O N N 253 SER OXT O N N 254 SER H H N N 255 SER H2 H N N 256 SER HA H N N 257 SER HB2 H N N 258 SER HB3 H N N 259 SER HG H N N 260 SER HXT H N N 261 SO4 S S N N 262 SO4 O1 O N N 263 SO4 O2 O N N 264 SO4 O3 O N N 265 SO4 O4 O N N 266 THR N N N N 267 THR CA C N S 268 THR C C N N 269 THR O O N N 270 THR CB C N R 271 THR OG1 O N N 272 THR CG2 C N N 273 THR OXT O N N 274 THR H H N N 275 THR H2 H N N 276 THR HA H N N 277 THR HB H N N 278 THR HG1 H N N 279 THR HG21 H N N 280 THR HG22 H N N 281 THR HG23 H N N 282 THR HXT H N N 283 TRP N N N N 284 TRP CA C N S 285 TRP C C N N 286 TRP O O N N 287 TRP CB C N N 288 TRP CG C Y N 289 TRP CD1 C Y N 290 TRP CD2 C Y N 291 TRP NE1 N Y N 292 TRP CE2 C Y N 293 TRP CE3 C Y N 294 TRP CZ2 C Y N 295 TRP CZ3 C Y N 296 TRP CH2 C Y N 297 TRP OXT O N N 298 TRP H H N N 299 TRP H2 H N N 300 TRP HA H N N 301 TRP HB2 H N N 302 TRP HB3 H N N 303 TRP HD1 H N N 304 TRP HE1 H N N 305 TRP HE3 H N N 306 TRP HZ2 H N N 307 TRP HZ3 H N N 308 TRP HH2 H N N 309 TRP HXT H N N 310 TYR N N N N 311 TYR CA C N S 312 TYR C C N N 313 TYR O O N N 314 TYR CB C N N 315 TYR CG C Y N 316 TYR CD1 C Y N 317 TYR CD2 C Y N 318 TYR CE1 C Y N 319 TYR CE2 C Y N 320 TYR CZ C Y N 321 TYR OH O N N 322 TYR OXT O N N 323 TYR H H N N 324 TYR H2 H N N 325 TYR HA H N N 326 TYR HB2 H N N 327 TYR HB3 H N N 328 TYR HD1 H N N 329 TYR HD2 H N N 330 TYR HE1 H N N 331 TYR HE2 H N N 332 TYR HH H N N 333 TYR HXT H N N 334 VAL N N N N 335 VAL CA C N S 336 VAL C C N N 337 VAL O O N N 338 VAL CB C N N 339 VAL CG1 C N N 340 VAL CG2 C N N 341 VAL OXT O N N 342 VAL H H N N 343 VAL H2 H N N 344 VAL HA H N N 345 VAL HB H N N 346 VAL HG11 H N N 347 VAL HG12 H N N 348 VAL HG13 H N N 349 VAL HG21 H N N 350 VAL HG22 H N N 351 VAL HG23 H N N 352 VAL HXT H N N 353 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 CO2 C O1 doub N N 77 CO2 C O2 doub N N 78 CYS N CA sing N N 79 CYS N H sing N N 80 CYS N H2 sing N N 81 CYS CA C sing N N 82 CYS CA CB sing N N 83 CYS CA HA sing N N 84 CYS C O doub N N 85 CYS C OXT sing N N 86 CYS CB SG sing N N 87 CYS CB HB2 sing N N 88 CYS CB HB3 sing N N 89 CYS SG HG sing N N 90 CYS OXT HXT sing N N 91 EDO C1 O1 sing N N 92 EDO C1 C2 sing N N 93 EDO C1 H11 sing N N 94 EDO C1 H12 sing N N 95 EDO O1 HO1 sing N N 96 EDO C2 O2 sing N N 97 EDO C2 H21 sing N N 98 EDO C2 H22 sing N N 99 EDO O2 HO2 sing N N 100 GLU N CA sing N N 101 GLU N H sing N N 102 GLU N H2 sing N N 103 GLU CA C sing N N 104 GLU CA CB sing N N 105 GLU CA HA sing N N 106 GLU C O doub N N 107 GLU C OXT sing N N 108 GLU CB CG sing N N 109 GLU CB HB2 sing N N 110 GLU CB HB3 sing N N 111 GLU CG CD sing N N 112 GLU CG HG2 sing N N 113 GLU CG HG3 sing N N 114 GLU CD OE1 doub N N 115 GLU CD OE2 sing N N 116 GLU OE2 HE2 sing N N 117 GLU OXT HXT sing N N 118 GLY N CA sing N N 119 GLY N H sing N N 120 GLY N H2 sing N N 121 GLY CA C sing N N 122 GLY CA HA2 sing N N 123 GLY CA HA3 sing N N 124 GLY C O doub N N 125 GLY C OXT sing N N 126 GLY OXT HXT sing N N 127 HOH O H1 sing N N 128 HOH O H2 sing N N 129 ILE N CA sing N N 130 ILE N H sing N N 131 ILE N H2 sing N N 132 ILE CA C sing N N 133 ILE CA CB sing N N 134 ILE CA HA sing N N 135 ILE C O doub N N 136 ILE C OXT sing N N 137 ILE CB CG1 sing N N 138 ILE CB CG2 sing N N 139 ILE CB HB sing N N 140 ILE CG1 CD1 sing N N 141 ILE CG1 HG12 sing N N 142 ILE CG1 HG13 sing N N 143 ILE CG2 HG21 sing N N 144 ILE CG2 HG22 sing N N 145 ILE CG2 HG23 sing N N 146 ILE CD1 HD11 sing N N 147 ILE CD1 HD12 sing N N 148 ILE CD1 HD13 sing N N 149 ILE OXT HXT sing N N 150 LEU N CA sing N N 151 LEU N H sing N N 152 LEU N H2 sing N N 153 LEU CA C sing N N 154 LEU CA CB sing N N 155 LEU CA HA sing N N 156 LEU C O doub N N 157 LEU C OXT sing N N 158 LEU CB CG sing N N 159 LEU CB HB2 sing N N 160 LEU CB HB3 sing N N 161 LEU CG CD1 sing N N 162 LEU CG CD2 sing N N 163 LEU CG HG sing N N 164 LEU CD1 HD11 sing N N 165 LEU CD1 HD12 sing N N 166 LEU CD1 HD13 sing N N 167 LEU CD2 HD21 sing N N 168 LEU CD2 HD22 sing N N 169 LEU CD2 HD23 sing N N 170 LEU OXT HXT sing N N 171 LYS N CA sing N N 172 LYS N H sing N N 173 LYS N H2 sing N N 174 LYS CA C sing N N 175 LYS CA CB sing N N 176 LYS CA HA sing N N 177 LYS C O doub N N 178 LYS C OXT sing N N 179 LYS CB CG sing N N 180 LYS CB HB2 sing N N 181 LYS CB HB3 sing N N 182 LYS CG CD sing N N 183 LYS CG HG2 sing N N 184 LYS CG HG3 sing N N 185 LYS CD CE sing N N 186 LYS CD HD2 sing N N 187 LYS CD HD3 sing N N 188 LYS CE NZ sing N N 189 LYS CE HE2 sing N N 190 LYS CE HE3 sing N N 191 LYS NZ HZ1 sing N N 192 LYS NZ HZ2 sing N N 193 LYS NZ HZ3 sing N N 194 LYS OXT HXT sing N N 195 MET N CA sing N N 196 MET N H sing N N 197 MET N H2 sing N N 198 MET CA C sing N N 199 MET CA CB sing N N 200 MET CA HA sing N N 201 MET C O doub N N 202 MET C OXT sing N N 203 MET CB CG sing N N 204 MET CB HB2 sing N N 205 MET CB HB3 sing N N 206 MET CG SD sing N N 207 MET CG HG2 sing N N 208 MET CG HG3 sing N N 209 MET SD CE sing N N 210 MET CE HE1 sing N N 211 MET CE HE2 sing N N 212 MET CE HE3 sing N N 213 MET OXT HXT sing N N 214 PRO N CA sing N N 215 PRO N CD sing N N 216 PRO N H sing N N 217 PRO CA C sing N N 218 PRO CA CB sing N N 219 PRO CA HA sing N N 220 PRO C O doub N N 221 PRO C OXT sing N N 222 PRO CB CG sing N N 223 PRO CB HB2 sing N N 224 PRO CB HB3 sing N N 225 PRO CG CD sing N N 226 PRO CG HG2 sing N N 227 PRO CG HG3 sing N N 228 PRO CD HD2 sing N N 229 PRO CD HD3 sing N N 230 PRO OXT HXT sing N N 231 SER N CA sing N N 232 SER N H sing N N 233 SER N H2 sing N N 234 SER CA C sing N N 235 SER CA CB sing N N 236 SER CA HA sing N N 237 SER C O doub N N 238 SER C OXT sing N N 239 SER CB OG sing N N 240 SER CB HB2 sing N N 241 SER CB HB3 sing N N 242 SER OG HG sing N N 243 SER OXT HXT sing N N 244 SO4 S O1 doub N N 245 SO4 S O2 doub N N 246 SO4 S O3 sing N N 247 SO4 S O4 sing N N 248 THR N CA sing N N 249 THR N H sing N N 250 THR N H2 sing N N 251 THR CA C sing N N 252 THR CA CB sing N N 253 THR CA HA sing N N 254 THR C O doub N N 255 THR C OXT sing N N 256 THR CB OG1 sing N N 257 THR CB CG2 sing N N 258 THR CB HB sing N N 259 THR OG1 HG1 sing N N 260 THR CG2 HG21 sing N N 261 THR CG2 HG22 sing N N 262 THR CG2 HG23 sing N N 263 THR OXT HXT sing N N 264 TRP N CA sing N N 265 TRP N H sing N N 266 TRP N H2 sing N N 267 TRP CA C sing N N 268 TRP CA CB sing N N 269 TRP CA HA sing N N 270 TRP C O doub N N 271 TRP C OXT sing N N 272 TRP CB CG sing N N 273 TRP CB HB2 sing N N 274 TRP CB HB3 sing N N 275 TRP CG CD1 doub Y N 276 TRP CG CD2 sing Y N 277 TRP CD1 NE1 sing Y N 278 TRP CD1 HD1 sing N N 279 TRP CD2 CE2 doub Y N 280 TRP CD2 CE3 sing Y N 281 TRP NE1 CE2 sing Y N 282 TRP NE1 HE1 sing N N 283 TRP CE2 CZ2 sing Y N 284 TRP CE3 CZ3 doub Y N 285 TRP CE3 HE3 sing N N 286 TRP CZ2 CH2 doub Y N 287 TRP CZ2 HZ2 sing N N 288 TRP CZ3 CH2 sing Y N 289 TRP CZ3 HZ3 sing N N 290 TRP CH2 HH2 sing N N 291 TRP OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'LITHIUM ION' LI 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 'CARBON DIOXIDE' CO2 6 'ACETIC ACID' ACY 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2SN3 _pdbx_initial_refinement_model.details 'PDB ENTRY 2SN3' #