data_2I9K # _entry.id 2I9K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2I9K pdb_00002i9k 10.2210/pdb2i9k/pdb NDB PD0862 ? ? RCSB RCSB039308 ? ? WWPDB D_1000039308 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-10 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2I9K _pdbx_database_status.recvd_initial_deposition_date 2006-09-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2HR1 'Ternary structure of WT M.HhaI C5-Cytosine DNA methyltransferase with unmodified DNA and AdoHcy' unspecified PDB 3MHT 'Ternary structure of HHAI methyltransferase with unmodified DNA and adhocy' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Youngblood, B.' 1 'Shieh, F.K.' 2 'De Los Rios, S.' 3 'Perona, J.J.' 4 'Reich, N.O.' 5 # _citation.id primary _citation.title 'Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination of DNA Methyltransferase M.HhaI' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 362 _citation.page_first 334 _citation.page_last 346 _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16919299 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2006.07.031 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Youngblood, B.' 1 ? primary 'Shieh, F.K.' 2 ? primary 'De Los Rios, S.' 3 ? primary 'Perona, J.J.' 4 ? primary 'Reich, N.O.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*T*GP*AP*TP*AP*GP*CP*GP*CP*TP*AP*TP*C)-3'" 3966.597 2 ? ? ? ? 2 polymer man 'Modification methylase HhaI' 36966.109 1 2.1.1.73 F124A ? ? 3 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Cytosine-specific methyltransferase HhaI, M.HhaI' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DG)(DA)(DT)(DA)(DG)(DC)(DG)(DC)(DT)(DA)(DT)(DC)' TGATAGCGCTATC C,D ? 2 'polypeptide(L)' no no ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNAASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNAASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name S-ADENOSYL-L-HOMOCYSTEINE _pdbx_entity_nonpoly.comp_id SAH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DA n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DC n 1 8 DG n 1 9 DC n 1 10 DT n 1 11 DA n 1 12 DT n 1 13 DC n 2 1 MET n 2 2 ILE n 2 3 GLU n 2 4 ILE n 2 5 LYS n 2 6 ASP n 2 7 LYS n 2 8 GLN n 2 9 LEU n 2 10 THR n 2 11 GLY n 2 12 LEU n 2 13 ARG n 2 14 PHE n 2 15 ILE n 2 16 ASP n 2 17 LEU n 2 18 PHE n 2 19 ALA n 2 20 GLY n 2 21 LEU n 2 22 GLY n 2 23 GLY n 2 24 PHE n 2 25 ARG n 2 26 LEU n 2 27 ALA n 2 28 LEU n 2 29 GLU n 2 30 SER n 2 31 CYS n 2 32 GLY n 2 33 ALA n 2 34 GLU n 2 35 CYS n 2 36 VAL n 2 37 TYR n 2 38 SER n 2 39 ASN n 2 40 GLU n 2 41 TRP n 2 42 ASP n 2 43 LYS n 2 44 TYR n 2 45 ALA n 2 46 GLN n 2 47 GLU n 2 48 VAL n 2 49 TYR n 2 50 GLU n 2 51 MET n 2 52 ASN n 2 53 PHE n 2 54 GLY n 2 55 GLU n 2 56 LYS n 2 57 PRO n 2 58 GLU n 2 59 GLY n 2 60 ASP n 2 61 ILE n 2 62 THR n 2 63 GLN n 2 64 VAL n 2 65 ASN n 2 66 GLU n 2 67 LYS n 2 68 THR n 2 69 ILE n 2 70 PRO n 2 71 ASP n 2 72 HIS n 2 73 ASP n 2 74 ILE n 2 75 LEU n 2 76 CYS n 2 77 ALA n 2 78 GLY n 2 79 PHE n 2 80 PRO n 2 81 CYS n 2 82 GLN n 2 83 ALA n 2 84 PHE n 2 85 SER n 2 86 ILE n 2 87 SER n 2 88 GLY n 2 89 LYS n 2 90 GLN n 2 91 LYS n 2 92 GLY n 2 93 PHE n 2 94 GLU n 2 95 ASP n 2 96 SER n 2 97 ARG n 2 98 GLY n 2 99 THR n 2 100 LEU n 2 101 PHE n 2 102 PHE n 2 103 ASP n 2 104 ILE n 2 105 ALA n 2 106 ARG n 2 107 ILE n 2 108 VAL n 2 109 ARG n 2 110 GLU n 2 111 LYS n 2 112 LYS n 2 113 PRO n 2 114 LYS n 2 115 VAL n 2 116 VAL n 2 117 PHE n 2 118 MET n 2 119 GLU n 2 120 ASN n 2 121 VAL n 2 122 LYS n 2 123 ASN n 2 124 ALA n 2 125 ALA n 2 126 SER n 2 127 HIS n 2 128 ASP n 2 129 ASN n 2 130 GLY n 2 131 ASN n 2 132 THR n 2 133 LEU n 2 134 GLU n 2 135 VAL n 2 136 VAL n 2 137 LYS n 2 138 ASN n 2 139 THR n 2 140 MET n 2 141 ASN n 2 142 GLU n 2 143 LEU n 2 144 ASP n 2 145 TYR n 2 146 SER n 2 147 PHE n 2 148 HIS n 2 149 ALA n 2 150 LYS n 2 151 VAL n 2 152 LEU n 2 153 ASN n 2 154 ALA n 2 155 LEU n 2 156 ASP n 2 157 TYR n 2 158 GLY n 2 159 ILE n 2 160 PRO n 2 161 GLN n 2 162 LYS n 2 163 ARG n 2 164 GLU n 2 165 ARG n 2 166 ILE n 2 167 TYR n 2 168 MET n 2 169 ILE n 2 170 CYS n 2 171 PHE n 2 172 ARG n 2 173 ASN n 2 174 ASP n 2 175 LEU n 2 176 ASN n 2 177 ILE n 2 178 GLN n 2 179 ASN n 2 180 PHE n 2 181 GLN n 2 182 PHE n 2 183 PRO n 2 184 LYS n 2 185 PRO n 2 186 PHE n 2 187 GLU n 2 188 LEU n 2 189 ASN n 2 190 THR n 2 191 PHE n 2 192 VAL n 2 193 LYS n 2 194 ASP n 2 195 LEU n 2 196 LEU n 2 197 LEU n 2 198 PRO n 2 199 ASP n 2 200 SER n 2 201 GLU n 2 202 VAL n 2 203 GLU n 2 204 HIS n 2 205 LEU n 2 206 VAL n 2 207 ILE n 2 208 ASP n 2 209 ARG n 2 210 LYS n 2 211 ASP n 2 212 LEU n 2 213 VAL n 2 214 MET n 2 215 THR n 2 216 ASN n 2 217 GLN n 2 218 GLU n 2 219 ILE n 2 220 GLU n 2 221 GLN n 2 222 THR n 2 223 THR n 2 224 PRO n 2 225 LYS n 2 226 THR n 2 227 VAL n 2 228 ARG n 2 229 LEU n 2 230 GLY n 2 231 ILE n 2 232 VAL n 2 233 GLY n 2 234 LYS n 2 235 GLY n 2 236 GLY n 2 237 GLN n 2 238 GLY n 2 239 GLU n 2 240 ARG n 2 241 ILE n 2 242 TYR n 2 243 SER n 2 244 THR n 2 245 ARG n 2 246 GLY n 2 247 ILE n 2 248 ALA n 2 249 ILE n 2 250 THR n 2 251 LEU n 2 252 SER n 2 253 ALA n 2 254 TYR n 2 255 GLY n 2 256 GLY n 2 257 GLY n 2 258 ILE n 2 259 PHE n 2 260 ALA n 2 261 LYS n 2 262 THR n 2 263 GLY n 2 264 GLY n 2 265 TYR n 2 266 LEU n 2 267 VAL n 2 268 ASN n 2 269 GLY n 2 270 LYS n 2 271 THR n 2 272 ARG n 2 273 LYS n 2 274 LEU n 2 275 HIS n 2 276 PRO n 2 277 ARG n 2 278 GLU n 2 279 CYS n 2 280 ALA n 2 281 ARG n 2 282 VAL n 2 283 MET n 2 284 GLY n 2 285 TYR n 2 286 PRO n 2 287 ASP n 2 288 SER n 2 289 TYR n 2 290 LYS n 2 291 VAL n 2 292 HIS n 2 293 PRO n 2 294 SER n 2 295 THR n 2 296 SER n 2 297 GLN n 2 298 ALA n 2 299 TYR n 2 300 LYS n 2 301 GLN n 2 302 PHE n 2 303 GLY n 2 304 ASN n 2 305 SER n 2 306 VAL n 2 307 VAL n 2 308 ILE n 2 309 ASN n 2 310 VAL n 2 311 LEU n 2 312 GLN n 2 313 TYR n 2 314 ILE n 2 315 ALA n 2 316 TYR n 2 317 ASN n 2 318 ILE n 2 319 GLY n 2 320 SER n 2 321 SER n 2 322 LEU n 2 323 ASN n 2 324 PHE n 2 325 LYS n 2 326 PRO n 2 327 TYR n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene hhaIM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus haemolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 726 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER1727 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHSHW-5 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 401 ? ? ? C . n A 1 2 DG 2 402 402 DG G C . n A 1 3 DA 3 403 403 DA A C . n A 1 4 DT 4 404 404 DT T C . n A 1 5 DA 5 405 405 DA A C . n A 1 6 DG 6 406 406 DG G C . n A 1 7 DC 7 407 407 DC C C . n A 1 8 DG 8 408 408 DG G C . n A 1 9 DC 9 409 409 DC C C . n A 1 10 DT 10 410 410 DT T C . n A 1 11 DA 11 411 411 DA A C . n A 1 12 DT 12 412 412 DT T C . n A 1 13 DC 13 413 413 DC C C . n B 1 1 DT 1 421 421 DT T D . n B 1 2 DG 2 422 422 DG G D . n B 1 3 DA 3 423 423 DA A D . n B 1 4 DT 4 424 424 DT T D . n B 1 5 DA 5 425 425 DA A D . n B 1 6 DG 6 426 426 DG G D . n B 1 7 DC 7 427 427 DC C D . n B 1 8 DG 8 428 428 DG G D . n B 1 9 DC 9 429 429 DC C D . n B 1 10 DT 10 430 430 DT T D . n B 1 11 DA 11 431 431 DA A D . n B 1 12 DT 12 432 432 DT T D . n B 1 13 DC 13 433 433 DC C D . n C 2 1 MET 1 1 1 MET MET A . n C 2 2 ILE 2 2 2 ILE ILE A . n C 2 3 GLU 3 3 3 GLU GLU A . n C 2 4 ILE 4 4 4 ILE ILE A . n C 2 5 LYS 5 5 5 LYS LYS A . n C 2 6 ASP 6 6 6 ASP ASP A . n C 2 7 LYS 7 7 7 LYS LYS A . n C 2 8 GLN 8 8 8 GLN GLN A . n C 2 9 LEU 9 9 9 LEU LEU A . n C 2 10 THR 10 10 10 THR THR A . n C 2 11 GLY 11 11 11 GLY GLY A . n C 2 12 LEU 12 12 12 LEU LEU A . n C 2 13 ARG 13 13 13 ARG ARG A . n C 2 14 PHE 14 14 14 PHE PHE A . n C 2 15 ILE 15 15 15 ILE ILE A . n C 2 16 ASP 16 16 16 ASP ASP A . n C 2 17 LEU 17 17 17 LEU LEU A . n C 2 18 PHE 18 18 18 PHE PHE A . n C 2 19 ALA 19 19 19 ALA ALA A . n C 2 20 GLY 20 20 20 GLY GLY A . n C 2 21 LEU 21 21 21 LEU LEU A . n C 2 22 GLY 22 22 22 GLY GLY A . n C 2 23 GLY 23 23 23 GLY GLY A . n C 2 24 PHE 24 24 24 PHE PHE A . n C 2 25 ARG 25 25 25 ARG ARG A . n C 2 26 LEU 26 26 26 LEU LEU A . n C 2 27 ALA 27 27 27 ALA ALA A . n C 2 28 LEU 28 28 28 LEU LEU A . n C 2 29 GLU 29 29 29 GLU GLU A . n C 2 30 SER 30 30 30 SER SER A . n C 2 31 CYS 31 31 31 CYS CYS A . n C 2 32 GLY 32 32 32 GLY GLY A . n C 2 33 ALA 33 33 33 ALA ALA A . n C 2 34 GLU 34 34 34 GLU GLU A . n C 2 35 CYS 35 35 35 CYS CYS A . n C 2 36 VAL 36 36 36 VAL VAL A . n C 2 37 TYR 37 37 37 TYR TYR A . n C 2 38 SER 38 38 38 SER SER A . n C 2 39 ASN 39 39 39 ASN ASN A . n C 2 40 GLU 40 40 40 GLU GLU A . n C 2 41 TRP 41 41 41 TRP TRP A . n C 2 42 ASP 42 42 42 ASP ASP A . n C 2 43 LYS 43 43 43 LYS LYS A . n C 2 44 TYR 44 44 44 TYR TYR A . n C 2 45 ALA 45 45 45 ALA ALA A . n C 2 46 GLN 46 46 46 GLN GLN A . n C 2 47 GLU 47 47 47 GLU GLU A . n C 2 48 VAL 48 48 48 VAL VAL A . n C 2 49 TYR 49 49 49 TYR TYR A . n C 2 50 GLU 50 50 50 GLU GLU A . n C 2 51 MET 51 51 51 MET MET A . n C 2 52 ASN 52 52 52 ASN ASN A . n C 2 53 PHE 53 53 53 PHE PHE A . n C 2 54 GLY 54 54 54 GLY GLY A . n C 2 55 GLU 55 55 55 GLU GLU A . n C 2 56 LYS 56 56 56 LYS LYS A . n C 2 57 PRO 57 57 57 PRO PRO A . n C 2 58 GLU 58 58 58 GLU GLU A . n C 2 59 GLY 59 59 59 GLY GLY A . n C 2 60 ASP 60 60 60 ASP ASP A . n C 2 61 ILE 61 61 61 ILE ILE A . n C 2 62 THR 62 62 62 THR THR A . n C 2 63 GLN 63 63 63 GLN GLN A . n C 2 64 VAL 64 64 64 VAL VAL A . n C 2 65 ASN 65 65 65 ASN ASN A . n C 2 66 GLU 66 66 66 GLU GLU A . n C 2 67 LYS 67 67 67 LYS LYS A . n C 2 68 THR 68 68 68 THR THR A . n C 2 69 ILE 69 69 69 ILE ILE A . n C 2 70 PRO 70 70 70 PRO PRO A . n C 2 71 ASP 71 71 71 ASP ASP A . n C 2 72 HIS 72 72 72 HIS HIS A . n C 2 73 ASP 73 73 73 ASP ASP A . n C 2 74 ILE 74 74 74 ILE ILE A . n C 2 75 LEU 75 75 75 LEU LEU A . n C 2 76 CYS 76 76 76 CYS CYS A . n C 2 77 ALA 77 77 77 ALA ALA A . n C 2 78 GLY 78 78 78 GLY GLY A . n C 2 79 PHE 79 79 79 PHE PHE A . n C 2 80 PRO 80 80 80 PRO PRO A . n C 2 81 CYS 81 81 81 CYS CYS A . n C 2 82 GLN 82 82 82 GLN GLN A . n C 2 83 ALA 83 83 83 ALA ALA A . n C 2 84 PHE 84 84 84 PHE PHE A . n C 2 85 SER 85 85 85 SER SER A . n C 2 86 ILE 86 86 86 ILE ILE A . n C 2 87 SER 87 87 87 SER SER A . n C 2 88 GLY 88 88 88 GLY GLY A . n C 2 89 LYS 89 89 89 LYS LYS A . n C 2 90 GLN 90 90 90 GLN GLN A . n C 2 91 LYS 91 91 91 LYS LYS A . n C 2 92 GLY 92 92 92 GLY GLY A . n C 2 93 PHE 93 93 93 PHE PHE A . n C 2 94 GLU 94 94 94 GLU GLU A . n C 2 95 ASP 95 95 95 ASP ASP A . n C 2 96 SER 96 96 96 SER SER A . n C 2 97 ARG 97 97 97 ARG ARG A . n C 2 98 GLY 98 98 98 GLY GLY A . n C 2 99 THR 99 99 99 THR THR A . n C 2 100 LEU 100 100 100 LEU LEU A . n C 2 101 PHE 101 101 101 PHE PHE A . n C 2 102 PHE 102 102 102 PHE PHE A . n C 2 103 ASP 103 103 103 ASP ASP A . n C 2 104 ILE 104 104 104 ILE ILE A . n C 2 105 ALA 105 105 105 ALA ALA A . n C 2 106 ARG 106 106 106 ARG ARG A . n C 2 107 ILE 107 107 107 ILE ILE A . n C 2 108 VAL 108 108 108 VAL VAL A . n C 2 109 ARG 109 109 109 ARG ARG A . n C 2 110 GLU 110 110 110 GLU GLU A . n C 2 111 LYS 111 111 111 LYS LYS A . n C 2 112 LYS 112 112 112 LYS LYS A . n C 2 113 PRO 113 113 113 PRO PRO A . n C 2 114 LYS 114 114 114 LYS LYS A . n C 2 115 VAL 115 115 115 VAL VAL A . n C 2 116 VAL 116 116 116 VAL VAL A . n C 2 117 PHE 117 117 117 PHE PHE A . n C 2 118 MET 118 118 118 MET MET A . n C 2 119 GLU 119 119 119 GLU GLU A . n C 2 120 ASN 120 120 120 ASN ASN A . n C 2 121 VAL 121 121 121 VAL VAL A . n C 2 122 LYS 122 122 122 LYS LYS A . n C 2 123 ASN 123 123 123 ASN ASN A . n C 2 124 ALA 124 124 124 ALA ALA A . n C 2 125 ALA 125 125 125 ALA ALA A . n C 2 126 SER 126 126 126 SER SER A . n C 2 127 HIS 127 127 127 HIS HIS A . n C 2 128 ASP 128 128 128 ASP ASP A . n C 2 129 ASN 129 129 129 ASN ASN A . n C 2 130 GLY 130 130 130 GLY GLY A . n C 2 131 ASN 131 131 131 ASN ASN A . n C 2 132 THR 132 132 132 THR THR A . n C 2 133 LEU 133 133 133 LEU LEU A . n C 2 134 GLU 134 134 134 GLU GLU A . n C 2 135 VAL 135 135 135 VAL VAL A . n C 2 136 VAL 136 136 136 VAL VAL A . n C 2 137 LYS 137 137 137 LYS LYS A . n C 2 138 ASN 138 138 138 ASN ASN A . n C 2 139 THR 139 139 139 THR THR A . n C 2 140 MET 140 140 140 MET MET A . n C 2 141 ASN 141 141 141 ASN ASN A . n C 2 142 GLU 142 142 142 GLU GLU A . n C 2 143 LEU 143 143 143 LEU LEU A . n C 2 144 ASP 144 144 144 ASP ASP A . n C 2 145 TYR 145 145 145 TYR TYR A . n C 2 146 SER 146 146 146 SER SER A . n C 2 147 PHE 147 147 147 PHE PHE A . n C 2 148 HIS 148 148 148 HIS HIS A . n C 2 149 ALA 149 149 149 ALA ALA A . n C 2 150 LYS 150 150 150 LYS LYS A . n C 2 151 VAL 151 151 151 VAL VAL A . n C 2 152 LEU 152 152 152 LEU LEU A . n C 2 153 ASN 153 153 153 ASN ASN A . n C 2 154 ALA 154 154 154 ALA ALA A . n C 2 155 LEU 155 155 155 LEU LEU A . n C 2 156 ASP 156 156 156 ASP ASP A . n C 2 157 TYR 157 157 157 TYR TYR A . n C 2 158 GLY 158 158 158 GLY GLY A . n C 2 159 ILE 159 159 159 ILE ILE A . n C 2 160 PRO 160 160 160 PRO PRO A . n C 2 161 GLN 161 161 161 GLN GLN A . n C 2 162 LYS 162 162 162 LYS LYS A . n C 2 163 ARG 163 163 163 ARG ARG A . n C 2 164 GLU 164 164 164 GLU GLU A . n C 2 165 ARG 165 165 165 ARG ARG A . n C 2 166 ILE 166 166 166 ILE ILE A . n C 2 167 TYR 167 167 167 TYR TYR A . n C 2 168 MET 168 168 168 MET MET A . n C 2 169 ILE 169 169 169 ILE ILE A . n C 2 170 CYS 170 170 170 CYS CYS A . n C 2 171 PHE 171 171 171 PHE PHE A . n C 2 172 ARG 172 172 172 ARG ARG A . n C 2 173 ASN 173 173 173 ASN ASN A . n C 2 174 ASP 174 174 174 ASP ASP A . n C 2 175 LEU 175 175 175 LEU LEU A . n C 2 176 ASN 176 176 176 ASN ASN A . n C 2 177 ILE 177 177 177 ILE ILE A . n C 2 178 GLN 178 178 178 GLN GLN A . n C 2 179 ASN 179 179 179 ASN ASN A . n C 2 180 PHE 180 180 180 PHE PHE A . n C 2 181 GLN 181 181 181 GLN GLN A . n C 2 182 PHE 182 182 182 PHE PHE A . n C 2 183 PRO 183 183 183 PRO PRO A . n C 2 184 LYS 184 184 184 LYS LYS A . n C 2 185 PRO 185 185 185 PRO PRO A . n C 2 186 PHE 186 186 186 PHE PHE A . n C 2 187 GLU 187 187 187 GLU GLU A . n C 2 188 LEU 188 188 188 LEU LEU A . n C 2 189 ASN 189 189 189 ASN ASN A . n C 2 190 THR 190 190 190 THR THR A . n C 2 191 PHE 191 191 191 PHE PHE A . n C 2 192 VAL 192 192 192 VAL VAL A . n C 2 193 LYS 193 193 193 LYS LYS A . n C 2 194 ASP 194 194 194 ASP ASP A . n C 2 195 LEU 195 195 195 LEU LEU A . n C 2 196 LEU 196 196 196 LEU LEU A . n C 2 197 LEU 197 197 197 LEU LEU A . n C 2 198 PRO 198 198 198 PRO PRO A . n C 2 199 ASP 199 199 199 ASP ASP A . n C 2 200 SER 200 200 200 SER SER A . n C 2 201 GLU 201 201 201 GLU GLU A . n C 2 202 VAL 202 202 202 VAL VAL A . n C 2 203 GLU 203 203 203 GLU GLU A . n C 2 204 HIS 204 204 204 HIS HIS A . n C 2 205 LEU 205 205 205 LEU LEU A . n C 2 206 VAL 206 206 206 VAL VAL A . n C 2 207 ILE 207 207 207 ILE ILE A . n C 2 208 ASP 208 208 208 ASP ASP A . n C 2 209 ARG 209 209 209 ARG ARG A . n C 2 210 LYS 210 210 210 LYS LYS A . n C 2 211 ASP 211 211 211 ASP ASP A . n C 2 212 LEU 212 212 212 LEU LEU A . n C 2 213 VAL 213 213 213 VAL VAL A . n C 2 214 MET 214 214 214 MET MET A . n C 2 215 THR 215 215 215 THR THR A . n C 2 216 ASN 216 216 216 ASN ASN A . n C 2 217 GLN 217 217 217 GLN GLN A . n C 2 218 GLU 218 218 218 GLU GLU A . n C 2 219 ILE 219 219 219 ILE ILE A . n C 2 220 GLU 220 220 220 GLU GLU A . n C 2 221 GLN 221 221 221 GLN GLN A . n C 2 222 THR 222 222 222 THR THR A . n C 2 223 THR 223 223 223 THR THR A . n C 2 224 PRO 224 224 224 PRO PRO A . n C 2 225 LYS 225 225 225 LYS LYS A . n C 2 226 THR 226 226 226 THR THR A . n C 2 227 VAL 227 227 227 VAL VAL A . n C 2 228 ARG 228 228 228 ARG ARG A . n C 2 229 LEU 229 229 229 LEU LEU A . n C 2 230 GLY 230 230 230 GLY GLY A . n C 2 231 ILE 231 231 231 ILE ILE A . n C 2 232 VAL 232 232 232 VAL VAL A . n C 2 233 GLY 233 233 233 GLY GLY A . n C 2 234 LYS 234 234 234 LYS LYS A . n C 2 235 GLY 235 235 235 GLY GLY A . n C 2 236 GLY 236 236 236 GLY GLY A . n C 2 237 GLN 237 237 237 GLN GLN A . n C 2 238 GLY 238 238 238 GLY GLY A . n C 2 239 GLU 239 239 239 GLU GLU A . n C 2 240 ARG 240 240 240 ARG ARG A . n C 2 241 ILE 241 241 241 ILE ILE A . n C 2 242 TYR 242 242 242 TYR TYR A . n C 2 243 SER 243 243 243 SER SER A . n C 2 244 THR 244 244 244 THR THR A . n C 2 245 ARG 245 245 245 ARG ARG A . n C 2 246 GLY 246 246 246 GLY GLY A . n C 2 247 ILE 247 247 247 ILE ILE A . n C 2 248 ALA 248 248 248 ALA ALA A . n C 2 249 ILE 249 249 249 ILE ILE A . n C 2 250 THR 250 250 250 THR THR A . n C 2 251 LEU 251 251 251 LEU LEU A . n C 2 252 SER 252 252 252 SER SER A . n C 2 253 ALA 253 253 253 ALA ALA A . n C 2 254 TYR 254 254 254 TYR TYR A . n C 2 255 GLY 255 255 255 GLY GLY A . n C 2 256 GLY 256 256 256 GLY GLY A . n C 2 257 GLY 257 257 257 GLY GLY A . n C 2 258 ILE 258 258 258 ILE ILE A . n C 2 259 PHE 259 259 259 PHE PHE A . n C 2 260 ALA 260 260 260 ALA ALA A . n C 2 261 LYS 261 261 261 LYS LYS A . n C 2 262 THR 262 262 262 THR THR A . n C 2 263 GLY 263 263 263 GLY GLY A . n C 2 264 GLY 264 264 264 GLY GLY A . n C 2 265 TYR 265 265 265 TYR TYR A . n C 2 266 LEU 266 266 266 LEU LEU A . n C 2 267 VAL 267 267 267 VAL VAL A . n C 2 268 ASN 268 268 268 ASN ASN A . n C 2 269 GLY 269 269 269 GLY GLY A . n C 2 270 LYS 270 270 270 LYS LYS A . n C 2 271 THR 271 271 271 THR THR A . n C 2 272 ARG 272 272 272 ARG ARG A . n C 2 273 LYS 273 273 273 LYS LYS A . n C 2 274 LEU 274 274 274 LEU LEU A . n C 2 275 HIS 275 275 275 HIS HIS A . n C 2 276 PRO 276 276 276 PRO PRO A . n C 2 277 ARG 277 277 277 ARG ARG A . n C 2 278 GLU 278 278 278 GLU GLU A . n C 2 279 CYS 279 279 279 CYS CYS A . n C 2 280 ALA 280 280 280 ALA ALA A . n C 2 281 ARG 281 281 281 ARG ARG A . n C 2 282 VAL 282 282 282 VAL VAL A . n C 2 283 MET 283 283 283 MET MET A . n C 2 284 GLY 284 284 284 GLY GLY A . n C 2 285 TYR 285 285 285 TYR TYR A . n C 2 286 PRO 286 286 286 PRO PRO A . n C 2 287 ASP 287 287 287 ASP ASP A . n C 2 288 SER 288 288 288 SER SER A . n C 2 289 TYR 289 289 289 TYR TYR A . n C 2 290 LYS 290 290 290 LYS LYS A . n C 2 291 VAL 291 291 291 VAL VAL A . n C 2 292 HIS 292 292 292 HIS HIS A . n C 2 293 PRO 293 293 293 PRO PRO A . n C 2 294 SER 294 294 294 SER SER A . n C 2 295 THR 295 295 295 THR THR A . n C 2 296 SER 296 296 296 SER SER A . n C 2 297 GLN 297 297 297 GLN GLN A . n C 2 298 ALA 298 298 298 ALA ALA A . n C 2 299 TYR 299 299 299 TYR TYR A . n C 2 300 LYS 300 300 300 LYS LYS A . n C 2 301 GLN 301 301 301 GLN GLN A . n C 2 302 PHE 302 302 302 PHE PHE A . n C 2 303 GLY 303 303 303 GLY GLY A . n C 2 304 ASN 304 304 304 ASN ASN A . n C 2 305 SER 305 305 305 SER SER A . n C 2 306 VAL 306 306 306 VAL VAL A . n C 2 307 VAL 307 307 307 VAL VAL A . n C 2 308 ILE 308 308 308 ILE ILE A . n C 2 309 ASN 309 309 309 ASN ASN A . n C 2 310 VAL 310 310 310 VAL VAL A . n C 2 311 LEU 311 311 311 LEU LEU A . n C 2 312 GLN 312 312 312 GLN GLN A . n C 2 313 TYR 313 313 313 TYR TYR A . n C 2 314 ILE 314 314 314 ILE ILE A . n C 2 315 ALA 315 315 315 ALA ALA A . n C 2 316 TYR 316 316 316 TYR TYR A . n C 2 317 ASN 317 317 317 ASN ASN A . n C 2 318 ILE 318 318 318 ILE ILE A . n C 2 319 GLY 319 319 319 GLY GLY A . n C 2 320 SER 320 320 320 SER SER A . n C 2 321 SER 321 321 321 SER SER A . n C 2 322 LEU 322 322 322 LEU LEU A . n C 2 323 ASN 323 323 323 ASN ASN A . n C 2 324 PHE 324 324 324 PHE PHE A . n C 2 325 LYS 325 325 325 LYS LYS A . n C 2 326 PRO 326 326 326 PRO PRO A . n C 2 327 TYR 327 327 327 TYR TYR A . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id SAH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 328 _pdbx_nonpoly_scheme.auth_seq_num 328 _pdbx_nonpoly_scheme.pdb_mon_id SAH _pdbx_nonpoly_scheme.auth_mon_id SAH _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DG 402 ? P ? A DG 2 P 2 1 Y 1 C DG 402 ? OP1 ? A DG 2 OP1 3 1 Y 1 C DG 402 ? OP2 ? A DG 2 OP2 4 1 Y 1 A LYS 89 ? CG ? C LYS 89 CG 5 1 Y 1 A LYS 89 ? CD ? C LYS 89 CD 6 1 Y 1 A LYS 89 ? CE ? C LYS 89 CE 7 1 Y 1 A LYS 89 ? NZ ? C LYS 89 NZ 8 1 Y 1 A LYS 91 ? CG ? C LYS 91 CG 9 1 Y 1 A LYS 91 ? CD ? C LYS 91 CD 10 1 Y 1 A LYS 91 ? CE ? C LYS 91 CE 11 1 Y 1 A LYS 91 ? NZ ? C LYS 91 NZ 12 1 Y 1 A GLU 94 ? CG ? C GLU 94 CG 13 1 Y 1 A GLU 94 ? CD ? C GLU 94 CD 14 1 Y 1 A GLU 94 ? OE1 ? C GLU 94 OE1 15 1 Y 1 A GLU 94 ? OE2 ? C GLU 94 OE2 16 1 Y 1 A SER 96 ? OG ? C SER 96 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 CNS refinement . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 CNS phasing . ? 4 # _cell.entry_id 2I9K _cell.length_a 97.510 _cell.length_b 97.510 _cell.length_c 319.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2I9K _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2I9K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.25 _exptl_crystal.density_percent_sol 62.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '20% Ammonium Sulfate, 100mM Sodium Citrate buffer, pH 6.0, hanging drop, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Ammonium Sulfate' ? ? ? 1 2 1 'Sodium Citrate buffer' ? ? ? 1 3 1 HOH ? ? ? 1 4 2 'Ammonium Sulfate' ? ? ? 1 5 2 'Sodium Citrate buffer' ? ? ? 1 6 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 2004-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Ni MIRROR + Ni FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.541 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.541 # _reflns.entry_id 2I9K _reflns.observed_criterion_sigma_F 1.9 _reflns.observed_criterion_sigma_I 1.9 _reflns.d_resolution_high 2.65 _reflns.d_resolution_low 8.38 _reflns.number_all ? _reflns.number_obs 17397 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI 7.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.79 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs 0.39 _reflns_shell.pdbx_Rsym_value 0.287 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2096 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2I9K _refine.ls_d_res_high 2.65 _refine.ls_d_res_low 2.79 _refine.pdbx_ls_sigma_F 1.9 _refine.pdbx_ls_sigma_I 1.9 _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17397 _refine.ls_number_reflns_R_free 2096 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_all 0.39 _refine.ls_R_factor_obs 0.287 _refine.ls_R_factor_R_work 0.238 _refine.ls_R_factor_R_free 0.262 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2587 _refine_hist.pdbx_number_atoms_nucleic_acid 506 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3119 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 2.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.0075 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 2I9K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2I9K _struct.title 'Engineered Extrahelical Base Destabilization Enhances Sequence Discrimination of DNA Methyltransferase M.HhaI' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2I9K _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'Phe124Ala mutation in M.HhaI, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP MTH1_HAEPH P05102 2 1 ? ? 2 PDB 2I9K 2I9K 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2I9K A 1 ? 327 ? P05102 1 ? 327 ? 1 327 2 2 2I9K C 1 ? 13 ? 2I9K 401 ? 413 ? 401 413 3 2 2I9K D 1 ? 13 ? 2I9K 421 ? 433 ? 421 433 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2I9K _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 124 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P05102 _struct_ref_seq_dif.db_mon_id PHE _struct_ref_seq_dif.pdbx_seq_db_seq_num 124 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 124 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4320 ? 1 MORE -15 ? 1 'SSA (A^2)' 15890 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY C 22 ? CYS C 31 ? GLY A 22 CYS A 31 1 ? 10 HELX_P HELX_P2 2 ASP C 42 ? GLY C 54 ? ASP A 42 GLY A 54 1 ? 13 HELX_P HELX_P3 3 ASP C 60 ? VAL C 64 ? ASP A 60 VAL A 64 5 ? 5 HELX_P HELX_P4 4 ASN C 65 ? ILE C 69 ? ASN A 65 ILE A 69 5 ? 5 HELX_P HELX_P5 5 LYS C 91 ? GLY C 98 ? LYS A 91 GLY A 98 5 ? 8 HELX_P HELX_P6 6 THR C 99 ? LYS C 112 ? THR A 99 LYS A 112 1 ? 14 HELX_P HELX_P7 7 LYS C 122 ? GLU C 142 ? LYS A 122 GLU A 142 1 ? 21 HELX_P HELX_P8 8 LEU C 155 ? TYR C 157 ? LEU A 155 TYR A 157 5 ? 3 HELX_P HELX_P9 9 PHE C 191 ? LEU C 196 ? PHE A 191 LEU A 196 1 ? 6 HELX_P HELX_P10 10 PRO C 198 ? GLU C 203 ? PRO A 198 GLU A 203 1 ? 6 HELX_P HELX_P11 11 HIS C 275 ? MET C 283 ? HIS A 275 MET A 283 1 ? 9 HELX_P HELX_P12 12 SER C 294 ? ASN C 304 ? SER A 294 ASN A 304 1 ? 11 HELX_P HELX_P13 13 VAL C 307 ? PHE C 324 ? VAL A 307 PHE A 324 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 13 N3 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 13 O2 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 13 N4 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 12 N3 ? ? C DA 403 D DT 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 12 O4 ? ? C DA 403 D DT 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 11 N1 ? ? C DT 404 D DA 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 11 N6 ? ? C DT 404 D DA 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 10 N3 ? ? C DA 405 D DT 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 10 O4 ? ? C DA 405 D DT 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 8 N1 ? ? C DC 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 8 O6 ? ? C DC 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 410 D DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 410 D DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 4 N3 ? ? C DA 411 D DT 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 4 O4 ? ? C DA 411 D DT 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 412 D DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 412 D DA 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 413 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 413 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 413 D DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU C 34 ? SER C 38 ? GLU A 34 SER A 38 A 2 ARG C 13 ? LEU C 17 ? ARG A 13 LEU A 17 A 3 ILE C 74 ? ALA C 77 ? ILE A 74 ALA A 77 A 4 VAL C 115 ? VAL C 121 ? VAL A 115 VAL A 121 A 5 GLU C 164 ? PHE C 171 ? GLU A 164 PHE A 171 A 6 HIS C 148 ? ASN C 153 ? HIS A 148 ASN A 153 B 1 VAL C 206 ? ILE C 207 ? VAL A 206 ILE A 207 B 2 LYS C 270 ? LYS C 273 ? LYS A 270 LYS A 273 B 3 GLY C 264 ? VAL C 267 ? GLY A 264 VAL A 267 B 4 ARG C 240 ? SER C 243 ? ARG A 240 SER A 243 B 5 ARG C 228 ? ILE C 231 ? ARG A 228 ILE A 231 B 6 VAL C 213 ? MET C 214 ? VAL A 213 MET A 214 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR C 37 ? O TYR A 37 N ASP C 16 ? N ASP A 16 A 2 3 N ILE C 15 ? N ILE A 15 O CYS C 76 ? O CYS A 76 A 3 4 N LEU C 75 ? N LEU A 75 O PHE C 117 ? O PHE A 117 A 4 5 N VAL C 116 ? N VAL A 116 O CYS C 170 ? O CYS A 170 A 5 6 O ILE C 169 ? O ILE A 169 N HIS C 148 ? N HIS A 148 B 1 2 N ILE C 207 ? N ILE A 207 O THR C 271 ? O THR A 271 B 2 3 O ARG C 272 ? O ARG A 272 N TYR C 265 ? N TYR A 265 B 3 4 O GLY C 264 ? O GLY A 264 N TYR C 242 ? N TYR A 242 B 4 5 O ILE C 241 ? O ILE A 241 N LEU C 229 ? N LEU A 229 B 5 6 O ILE C 231 ? O ILE A 231 N VAL C 213 ? N VAL A 213 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SAH _struct_site.pdbx_auth_seq_id 328 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'BINDING SITE FOR RESIDUE SAH A 328' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 PHE C 18 ? PHE A 18 . ? 1_555 ? 2 AC1 17 ALA C 19 ? ALA A 19 . ? 1_555 ? 3 AC1 17 GLY C 20 ? GLY A 20 . ? 1_555 ? 4 AC1 17 LEU C 21 ? LEU A 21 . ? 1_555 ? 5 AC1 17 GLY C 23 ? GLY A 23 . ? 1_555 ? 6 AC1 17 PHE C 24 ? PHE A 24 . ? 1_555 ? 7 AC1 17 ASN C 39 ? ASN A 39 . ? 1_555 ? 8 AC1 17 GLU C 40 ? GLU A 40 . ? 1_555 ? 9 AC1 17 TRP C 41 ? TRP A 41 . ? 1_555 ? 10 AC1 17 ASP C 60 ? ASP A 60 . ? 1_555 ? 11 AC1 17 ILE C 61 ? ILE A 61 . ? 1_555 ? 12 AC1 17 GLY C 78 ? GLY A 78 . ? 1_555 ? 13 AC1 17 PRO C 80 ? PRO A 80 . ? 1_555 ? 14 AC1 17 TYR C 285 ? TYR A 285 . ? 1_555 ? 15 AC1 17 ASN C 304 ? ASN A 304 . ? 1_555 ? 16 AC1 17 SER C 305 ? SER A 305 . ? 1_555 ? 17 AC1 17 VAL C 306 ? VAL A 306 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLY _pdbx_validate_rmsd_angle.auth_seq_id_1 78 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLY _pdbx_validate_rmsd_angle.auth_seq_id_2 78 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 GLY _pdbx_validate_rmsd_angle.auth_seq_id_3 78 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.32 _pdbx_validate_rmsd_angle.angle_target_value 113.10 _pdbx_validate_rmsd_angle.angle_deviation -15.78 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 40 ? ? -171.70 131.35 2 1 ASP A 60 ? ? -11.15 100.96 3 1 ALA A 77 ? ? -169.55 112.64 4 1 PRO A 80 ? ? -47.21 150.75 5 1 GLN A 90 ? ? 46.13 27.07 6 1 LYS A 91 ? ? -65.92 5.11 7 1 ASP A 144 ? ? 85.99 40.72 8 1 LYS A 162 ? ? -79.29 40.86 9 1 ASN A 176 ? ? -105.98 73.91 10 1 GLU A 218 ? ? -42.14 152.27 11 1 PRO A 224 ? ? -77.10 40.47 12 1 PHE A 259 ? ? -101.75 43.54 13 1 ALA A 260 ? ? -38.45 122.53 14 1 LYS A 261 ? ? 71.38 -16.59 15 1 SER A 305 ? ? -85.29 -157.38 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 413 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.069 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id DT _pdbx_unobs_or_zero_occ_residues.auth_seq_id 401 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id DT _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SAH N N N N 430 SAH CA C N S 431 SAH CB C N N 432 SAH CG C N N 433 SAH SD S N N 434 SAH C C N N 435 SAH O O N N 436 SAH OXT O N N 437 SAH "C5'" C N N 438 SAH "C4'" C N S 439 SAH "O4'" O N N 440 SAH "C3'" C N S 441 SAH "O3'" O N N 442 SAH "C2'" C N R 443 SAH "O2'" O N N 444 SAH "C1'" C N R 445 SAH N9 N Y N 446 SAH C8 C Y N 447 SAH N7 N Y N 448 SAH C5 C Y N 449 SAH C6 C Y N 450 SAH N6 N N N 451 SAH N1 N Y N 452 SAH C2 C Y N 453 SAH N3 N Y N 454 SAH C4 C Y N 455 SAH HN1 H N N 456 SAH HN2 H N N 457 SAH HA H N N 458 SAH HB1 H N N 459 SAH HB2 H N N 460 SAH HG1 H N N 461 SAH HG2 H N N 462 SAH HXT H N N 463 SAH "H5'1" H N N 464 SAH "H5'2" H N N 465 SAH "H4'" H N N 466 SAH "H3'" H N N 467 SAH "HO3'" H N N 468 SAH "H2'" H N N 469 SAH "HO2'" H N N 470 SAH "H1'" H N N 471 SAH H8 H N N 472 SAH HN61 H N N 473 SAH HN62 H N N 474 SAH H2 H N N 475 SER N N N N 476 SER CA C N S 477 SER C C N N 478 SER O O N N 479 SER CB C N N 480 SER OG O N N 481 SER OXT O N N 482 SER H H N N 483 SER H2 H N N 484 SER HA H N N 485 SER HB2 H N N 486 SER HB3 H N N 487 SER HG H N N 488 SER HXT H N N 489 THR N N N N 490 THR CA C N S 491 THR C C N N 492 THR O O N N 493 THR CB C N R 494 THR OG1 O N N 495 THR CG2 C N N 496 THR OXT O N N 497 THR H H N N 498 THR H2 H N N 499 THR HA H N N 500 THR HB H N N 501 THR HG1 H N N 502 THR HG21 H N N 503 THR HG22 H N N 504 THR HG23 H N N 505 THR HXT H N N 506 TRP N N N N 507 TRP CA C N S 508 TRP C C N N 509 TRP O O N N 510 TRP CB C N N 511 TRP CG C Y N 512 TRP CD1 C Y N 513 TRP CD2 C Y N 514 TRP NE1 N Y N 515 TRP CE2 C Y N 516 TRP CE3 C Y N 517 TRP CZ2 C Y N 518 TRP CZ3 C Y N 519 TRP CH2 C Y N 520 TRP OXT O N N 521 TRP H H N N 522 TRP H2 H N N 523 TRP HA H N N 524 TRP HB2 H N N 525 TRP HB3 H N N 526 TRP HD1 H N N 527 TRP HE1 H N N 528 TRP HE3 H N N 529 TRP HZ2 H N N 530 TRP HZ3 H N N 531 TRP HH2 H N N 532 TRP HXT H N N 533 TYR N N N N 534 TYR CA C N S 535 TYR C C N N 536 TYR O O N N 537 TYR CB C N N 538 TYR CG C Y N 539 TYR CD1 C Y N 540 TYR CD2 C Y N 541 TYR CE1 C Y N 542 TYR CE2 C Y N 543 TYR CZ C Y N 544 TYR OH O N N 545 TYR OXT O N N 546 TYR H H N N 547 TYR H2 H N N 548 TYR HA H N N 549 TYR HB2 H N N 550 TYR HB3 H N N 551 TYR HD1 H N N 552 TYR HD2 H N N 553 TYR HE1 H N N 554 TYR HE2 H N N 555 TYR HH H N N 556 TYR HXT H N N 557 VAL N N N N 558 VAL CA C N S 559 VAL C C N N 560 VAL O O N N 561 VAL CB C N N 562 VAL CG1 C N N 563 VAL CG2 C N N 564 VAL OXT O N N 565 VAL H H N N 566 VAL H2 H N N 567 VAL HA H N N 568 VAL HB H N N 569 VAL HG11 H N N 570 VAL HG12 H N N 571 VAL HG13 H N N 572 VAL HG21 H N N 573 VAL HG22 H N N 574 VAL HG23 H N N 575 VAL HXT H N N 576 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SAH N CA sing N N 424 SAH N HN1 sing N N 425 SAH N HN2 sing N N 426 SAH CA CB sing N N 427 SAH CA C sing N N 428 SAH CA HA sing N N 429 SAH CB CG sing N N 430 SAH CB HB1 sing N N 431 SAH CB HB2 sing N N 432 SAH CG SD sing N N 433 SAH CG HG1 sing N N 434 SAH CG HG2 sing N N 435 SAH SD "C5'" sing N N 436 SAH C O doub N N 437 SAH C OXT sing N N 438 SAH OXT HXT sing N N 439 SAH "C5'" "C4'" sing N N 440 SAH "C5'" "H5'1" sing N N 441 SAH "C5'" "H5'2" sing N N 442 SAH "C4'" "O4'" sing N N 443 SAH "C4'" "C3'" sing N N 444 SAH "C4'" "H4'" sing N N 445 SAH "O4'" "C1'" sing N N 446 SAH "C3'" "O3'" sing N N 447 SAH "C3'" "C2'" sing N N 448 SAH "C3'" "H3'" sing N N 449 SAH "O3'" "HO3'" sing N N 450 SAH "C2'" "O2'" sing N N 451 SAH "C2'" "C1'" sing N N 452 SAH "C2'" "H2'" sing N N 453 SAH "O2'" "HO2'" sing N N 454 SAH "C1'" N9 sing N N 455 SAH "C1'" "H1'" sing N N 456 SAH N9 C8 sing Y N 457 SAH N9 C4 sing Y N 458 SAH C8 N7 doub Y N 459 SAH C8 H8 sing N N 460 SAH N7 C5 sing Y N 461 SAH C5 C6 sing Y N 462 SAH C5 C4 doub Y N 463 SAH C6 N6 sing N N 464 SAH C6 N1 doub Y N 465 SAH N6 HN61 sing N N 466 SAH N6 HN62 sing N N 467 SAH N1 C2 sing Y N 468 SAH C2 N3 doub Y N 469 SAH C2 H2 sing N N 470 SAH N3 C4 sing Y N 471 SER N CA sing N N 472 SER N H sing N N 473 SER N H2 sing N N 474 SER CA C sing N N 475 SER CA CB sing N N 476 SER CA HA sing N N 477 SER C O doub N N 478 SER C OXT sing N N 479 SER CB OG sing N N 480 SER CB HB2 sing N N 481 SER CB HB3 sing N N 482 SER OG HG sing N N 483 SER OXT HXT sing N N 484 THR N CA sing N N 485 THR N H sing N N 486 THR N H2 sing N N 487 THR CA C sing N N 488 THR CA CB sing N N 489 THR CA HA sing N N 490 THR C O doub N N 491 THR C OXT sing N N 492 THR CB OG1 sing N N 493 THR CB CG2 sing N N 494 THR CB HB sing N N 495 THR OG1 HG1 sing N N 496 THR CG2 HG21 sing N N 497 THR CG2 HG22 sing N N 498 THR CG2 HG23 sing N N 499 THR OXT HXT sing N N 500 TRP N CA sing N N 501 TRP N H sing N N 502 TRP N H2 sing N N 503 TRP CA C sing N N 504 TRP CA CB sing N N 505 TRP CA HA sing N N 506 TRP C O doub N N 507 TRP C OXT sing N N 508 TRP CB CG sing N N 509 TRP CB HB2 sing N N 510 TRP CB HB3 sing N N 511 TRP CG CD1 doub Y N 512 TRP CG CD2 sing Y N 513 TRP CD1 NE1 sing Y N 514 TRP CD1 HD1 sing N N 515 TRP CD2 CE2 doub Y N 516 TRP CD2 CE3 sing Y N 517 TRP NE1 CE2 sing Y N 518 TRP NE1 HE1 sing N N 519 TRP CE2 CZ2 sing Y N 520 TRP CE3 CZ3 doub Y N 521 TRP CE3 HE3 sing N N 522 TRP CZ2 CH2 doub Y N 523 TRP CZ2 HZ2 sing N N 524 TRP CZ3 CH2 sing Y N 525 TRP CZ3 HZ3 sing N N 526 TRP CH2 HH2 sing N N 527 TRP OXT HXT sing N N 528 TYR N CA sing N N 529 TYR N H sing N N 530 TYR N H2 sing N N 531 TYR CA C sing N N 532 TYR CA CB sing N N 533 TYR CA HA sing N N 534 TYR C O doub N N 535 TYR C OXT sing N N 536 TYR CB CG sing N N 537 TYR CB HB2 sing N N 538 TYR CB HB3 sing N N 539 TYR CG CD1 doub Y N 540 TYR CG CD2 sing Y N 541 TYR CD1 CE1 sing Y N 542 TYR CD1 HD1 sing N N 543 TYR CD2 CE2 doub Y N 544 TYR CD2 HD2 sing N N 545 TYR CE1 CZ doub Y N 546 TYR CE1 HE1 sing N N 547 TYR CE2 CZ sing Y N 548 TYR CE2 HE2 sing N N 549 TYR CZ OH sing N N 550 TYR OH HH sing N N 551 TYR OXT HXT sing N N 552 VAL N CA sing N N 553 VAL N H sing N N 554 VAL N H2 sing N N 555 VAL CA C sing N N 556 VAL CA CB sing N N 557 VAL CA HA sing N N 558 VAL C O doub N N 559 VAL C OXT sing N N 560 VAL CB CG1 sing N N 561 VAL CB CG2 sing N N 562 VAL CB HB sing N N 563 VAL CG1 HG11 sing N N 564 VAL CG1 HG12 sing N N 565 VAL CG1 HG13 sing N N 566 VAL CG2 HG21 sing N N 567 VAL CG2 HG22 sing N N 568 VAL CG2 HG23 sing N N 569 VAL OXT HXT sing N N 570 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2I9K 'double helix' 2I9K 'b-form double helix' 2I9K 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 13 1_555 -0.232 -0.139 -0.231 -7.033 -5.402 -6.257 1 C_DG402:DC433_D C 402 ? D 433 ? 19 1 1 A DA 3 1_555 B DT 12 1_555 -0.214 -0.052 0.085 -4.315 -7.618 2.181 2 C_DA403:DT432_D C 403 ? D 432 ? 20 1 1 A DT 4 1_555 B DA 11 1_555 -0.103 -0.118 0.274 -0.980 -7.090 -1.135 3 C_DT404:DA431_D C 404 ? D 431 ? 20 1 1 A DA 5 1_555 B DT 10 1_555 0.552 -0.297 -0.191 7.056 -1.745 -1.816 4 C_DA405:DT430_D C 405 ? D 430 ? 20 1 1 A DG 6 1_555 B DC 9 1_555 -0.350 -0.275 0.424 18.543 2.868 -4.112 5 C_DG406:DC429_D C 406 ? D 429 ? 19 1 1 A DC 7 1_555 B DG 8 1_555 0.264 -0.266 -0.474 18.112 -6.034 -3.103 6 C_DC407:DG428_D C 407 ? D 428 ? 19 1 1 A DC 9 1_555 B DG 6 1_555 0.000 0.047 -0.694 11.116 -10.946 -1.062 7 C_DC409:DG426_D C 409 ? D 426 ? 19 1 1 A DT 10 1_555 B DA 5 1_555 -0.455 -0.423 -0.522 7.292 -7.757 8.517 8 C_DT410:DA425_D C 410 ? D 425 ? 20 1 1 A DA 11 1_555 B DT 4 1_555 0.209 -0.223 -0.257 2.620 -5.896 1.222 9 C_DA411:DT424_D C 411 ? D 424 ? 20 1 1 A DT 12 1_555 B DA 3 1_555 0.459 -0.079 -0.357 10.057 -4.872 -0.024 10 C_DT412:DA423_D C 412 ? D 423 ? 20 1 1 A DC 13 1_555 B DG 2 1_555 -0.438 -0.228 -0.860 26.838 -12.832 -2.485 11 C_DC413:DG422_D C 413 ? D 422 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 13 1_555 A DA 3 1_555 B DT 12 1_555 0.088 0.078 3.075 -3.198 6.004 33.802 -0.746 -0.617 3.023 10.197 5.432 34.461 1 CC_DG402DA403:DT432DC433_DD C 402 ? D 433 ? C 403 ? D 432 ? 1 A DA 3 1_555 B DT 12 1_555 A DT 4 1_555 B DA 11 1_555 -0.291 -0.475 3.210 -3.143 3.622 32.239 -1.464 -0.016 3.153 6.478 5.622 32.584 2 CC_DA403DT404:DA431DT432_DD C 403 ? D 432 ? C 404 ? D 431 ? 1 A DT 4 1_555 B DA 11 1_555 A DA 5 1_555 B DT 10 1_555 0.925 0.503 3.243 7.122 0.845 37.990 0.653 -0.504 3.366 1.284 -10.822 38.636 3 CC_DT404DA405:DT430DA431_DD C 404 ? D 431 ? C 405 ? D 430 ? 1 A DA 5 1_555 B DT 10 1_555 A DG 6 1_555 B DC 9 1_555 -1.365 0.112 3.009 -7.951 4.186 30.617 -0.540 1.072 3.240 7.720 14.666 31.878 4 CC_DA405DG406:DC429DT430_DD C 405 ? D 430 ? C 406 ? D 429 ? 1 A DG 6 1_555 B DC 9 1_555 A DC 7 1_555 B DG 8 1_555 1.075 -0.986 3.542 4.838 -7.617 33.495 -0.321 -0.956 3.783 -12.927 -8.210 34.656 5 CC_DG406DC407:DG428DC429_DD C 406 ? D 429 ? C 407 ? D 428 ? 1 A DC 7 1_555 B DG 8 1_555 A DC 9 1_555 B DG 6 1_555 -0.611 1.213 7.340 9.719 -0.459 50.722 1.464 2.174 7.108 -0.530 -11.227 51.586 6 CC_DC407DC409:DG426DG428_DD C 407 ? D 428 ? C 409 ? D 426 ? 1 A DC 9 1_555 B DG 6 1_555 A DT 10 1_555 B DA 5 1_555 0.770 0.052 3.400 1.539 7.659 38.592 -0.874 -0.953 3.376 11.446 -2.300 39.346 7 CC_DC409DT410:DA425DG426_DD C 409 ? D 426 ? C 410 ? D 425 ? 1 A DT 10 1_555 B DA 5 1_555 A DA 11 1_555 B DT 4 1_555 -0.595 0.520 3.582 -0.789 13.733 35.721 -1.161 0.797 3.550 21.434 1.231 38.197 8 CC_DT410DA411:DT424DA425_DD C 410 ? D 425 ? C 411 ? D 424 ? 1 A DA 11 1_555 B DT 4 1_555 A DT 12 1_555 B DA 3 1_555 -0.148 -0.432 3.057 -0.821 7.598 29.367 -2.233 0.132 2.860 14.676 1.586 30.324 9 CC_DA411DT412:DA423DT424_DD C 411 ? D 424 ? C 412 ? D 423 ? 1 A DT 12 1_555 B DA 3 1_555 A DC 13 1_555 B DG 2 1_555 -0.111 0.639 2.837 6.767 7.763 21.597 -0.727 2.247 2.741 19.363 -16.879 23.901 10 CC_DT412DC413:DG422DA423_DD C 412 ? D 423 ? C 413 ? D 422 ? # _atom_sites.entry_id 2I9K _atom_sites.fract_transf_matrix[1][1] 0.010255 _atom_sites.fract_transf_matrix[1][2] 0.005921 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011842 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003128 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_