HEADER SIGNALING PROTEIN 21-SEP-06 2IFS TITLE STRUCTURE OF THE N-WASP EVH1 DOMAIN IN COMPLEX WITH AN EXTENDED WIP TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WISKOTT-ALDRICH SYNDROME PROTEIN INTERACTING PROTEIN AND COMPND 3 NEURAL WISKOTT-ALDRICH SYNDROME PROTEIN CHIMERA; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: WIP PEPTIDE (RESIDUES 451-485) AND N-WASP EVH1 DOMAIN COMPND 6 (RESIDUES 26-147); COMPND 7 SYNONYM: N-WASP; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: FUSION PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: HUMAN, NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 9606,10116; SOURCE 5 STRAIN: ,; SOURCE 6 GENE: WASPIP, WASL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBH4 KEYWDS WISKOTT-ALDRICH SYNDROME, VERPROLIN, POLYPROLINE, PROTEIN-PROTEIN KEYWDS 2 COMPLEX, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.F.VOLKMAN,F.C.PETERSON,Q.DENG REVDAT 5 02-SEP-20 2IFS 1 COMPND REMARK SEQADV REVDAT 4 14-NOV-12 2IFS 1 REMARK REVDAT 3 24-FEB-09 2IFS 1 VERSN REVDAT 2 08-MAY-07 2IFS 1 JRNL REVDAT 1 16-JAN-07 2IFS 0 JRNL AUTH F.C.PETERSON,Q.DENG,M.ZETTL,K.E.PREHODA,W.A.LIM,M.WAY, JRNL AUTH 2 B.F.VOLKMAN JRNL TITL MULTIPLE WASP-INTERACTING PROTEIN RECOGNITION MOTIFS ARE JRNL TITL 2 REQUIRED FOR A FUNCTIONAL INTERACTION WITH N-WASP. JRNL REF J.BIOL.CHEM. V. 282 8446 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17229736 JRNL DOI 10.1074/JBC.M609902200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.9.3 REMARK 3 AUTHORS : REMARK 3 SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 STRUCTURES ARE BASED ON A TOTAL OF 2411 NOE CONSTRAINTS ( 383 REMARK 3 INTRA, 473 SEQUENTIAL, 386 MEDIUM AND 922 INTRAMOLECULAR LONG REMARK 3 RANGE - EVH1 DOMAIN, 247 INTERMOLECULAR WIP-EVH1 CONSTRAINTS) REMARK 3 AND 253 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS. REMARK 4 REMARK 4 2IFS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000039522. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.044 MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.0 MM U-15N/13C PROTEIN, 20 MM REMARK 210 SODIUM PHOSPHATE, 1 MM REMARK 210 DITHIOTHREITOL, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2004, XEASY REMARK 210 1.3, SPSCAN 1.1.0, GARANT 2.1, REMARK 210 CYANA 2.1 REMARK 210 METHOD USED : AUTOMATED METHODS WERE USED FOR REMARK 210 BACKBONE CHEMICAL SHIFT REMARK 210 ASSIGNMENT AND ITERATIVE NOE REMARK 210 REFINEMENT. FINAL STRUCTURES REMARK 210 WERE OBTAINED BY MOLECULAR REMARK 210 DYNAMICS IN EXPLICIT SOLVENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 452 -76.79 72.03 REMARK 500 1 ALA A 480 -53.48 68.35 REMARK 500 1 ARG A 481 80.32 -159.38 REMARK 500 1 ASN A 482 152.71 179.44 REMARK 500 1 LEU A 518 -62.21 -103.71 REMARK 500 1 SER A 526 91.86 66.39 REMARK 500 1 PHE A 530 98.02 56.28 REMARK 500 1 LYS A 533 -71.63 -133.78 REMARK 500 1 ARG A 550 -89.03 1.61 REMARK 500 1 CYS A 552 33.71 -158.34 REMARK 500 1 LEU A 585 99.17 61.48 REMARK 500 1 ARG A 601 92.11 71.44 REMARK 500 1 THR A 611 14.40 -145.78 REMARK 500 1 ARG A 638 154.32 77.09 REMARK 500 1 GLN A 639 93.02 -55.97 REMARK 500 2 ARG A 521 99.80 63.59 REMARK 500 2 SER A 523 111.48 67.19 REMARK 500 2 LEU A 527 87.86 56.91 REMARK 500 2 LYS A 534 177.45 65.33 REMARK 500 2 ARG A 550 -97.14 1.33 REMARK 500 2 CYS A 552 33.04 -152.30 REMARK 500 2 LEU A 585 103.20 66.83 REMARK 500 2 TYR A 592 31.02 -80.58 REMARK 500 2 ASN A 593 -64.37 57.56 REMARK 500 2 THR A 611 -17.52 -141.44 REMARK 500 2 ARG A 638 101.67 63.72 REMARK 500 2 GLN A 639 109.22 69.83 REMARK 500 3 PHE A 456 -48.22 -141.17 REMARK 500 3 VAL A 519 87.23 63.91 REMARK 500 3 PRO A 520 102.39 -57.30 REMARK 500 3 SER A 529 93.46 63.54 REMARK 500 3 LEU A 531 88.95 60.33 REMARK 500 3 LYS A 534 -173.23 55.57 REMARK 500 3 ARG A 550 -99.68 3.40 REMARK 500 3 CYS A 552 32.37 -145.64 REMARK 500 3 SER A 572 -150.82 -160.46 REMARK 500 3 ASP A 582 -82.33 -79.53 REMARK 500 3 LEU A 585 110.29 68.72 REMARK 500 3 ASN A 594 -25.23 166.80 REMARK 500 3 TYR A 603 -5.63 -154.22 REMARK 500 3 ARG A 638 -40.56 62.64 REMARK 500 3 SER A 642 -63.85 -90.29 REMARK 500 3 GLU A 643 85.35 53.55 REMARK 500 3 ARG A 646 -169.99 52.09 REMARK 500 4 PHE A 456 -64.73 -94.70 REMARK 500 4 ALA A 480 0.52 81.93 REMARK 500 4 ARG A 550 -74.52 -37.35 REMARK 500 4 CYS A 552 33.58 -166.67 REMARK 500 4 LEU A 585 125.37 78.40 REMARK 500 4 ASP A 610 -83.09 66.36 REMARK 500 REMARK 500 THIS ENTRY HAS 301 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 6 ARG A 638 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 FUSION PROTEIN CONSISTING OF WISKOTT-ALDRICH SYNDROME REMARK 999 PROTIEN INTERACTING PROTEIN (WIP), GGLVPRGSGG LINKER, REMARK 999 AND NEURAL WISKOTT-ALDRICH SYNDROM PROTEIN (N-WASP) DBREF 2IFS A 451 485 UNP O43516 WASIP_HUMAN 451 485 DBREF 2IFS A 526 647 UNP O08816 WASL_RAT 26 147 SEQADV 2IFS GLY A 449 UNP O08816 CLONING ARTIFACT SEQADV 2IFS SER A 450 UNP O08816 CLONING ARTIFACT SEQADV 2IFS GLY A 516 UNP O08816 SEE REMARK 999 SEQADV 2IFS GLY A 517 UNP O08816 SEE REMARK 999 SEQADV 2IFS LEU A 518 UNP O08816 SEE REMARK 999 SEQADV 2IFS VAL A 519 UNP O08816 SEE REMARK 999 SEQADV 2IFS PRO A 520 UNP O08816 SEE REMARK 999 SEQADV 2IFS ARG A 521 UNP O08816 SEE REMARK 999 SEQADV 2IFS GLY A 522 UNP O08816 SEE REMARK 999 SEQADV 2IFS SER A 523 UNP O08816 SEE REMARK 999 SEQADV 2IFS GLY A 524 UNP O08816 SEE REMARK 999 SEQADV 2IFS GLY A 525 UNP O08816 SEE REMARK 999 SEQRES 1 A 169 GLY SER GLU SER ARG PHE TYR PHE HIS PRO ILE SER ASP SEQRES 2 A 169 LEU PRO PRO PRO GLU PRO TYR VAL GLN THR THR LYS SER SEQRES 3 A 169 TYR PRO SER LYS LEU ALA ARG ASN GLU SER ARG GLY GLY SEQRES 4 A 169 LEU VAL PRO ARG GLY SER GLY GLY SER LEU PHE SER PHE SEQRES 5 A 169 LEU GLY LYS LYS CYS VAL THR MET SER SER ALA VAL VAL SEQRES 6 A 169 GLN LEU TYR ALA ALA ASP ARG ASN CYS MET TRP SER LYS SEQRES 7 A 169 LYS CYS SER GLY VAL ALA CYS LEU VAL LYS ASP ASN PRO SEQRES 8 A 169 GLN ARG SER TYR PHE LEU ARG ILE PHE ASP ILE LYS ASP SEQRES 9 A 169 GLY LYS LEU LEU TRP GLU GLN GLU LEU TYR ASN ASN PHE SEQRES 10 A 169 VAL TYR ASN SER PRO ARG GLY TYR PHE HIS THR PHE ALA SEQRES 11 A 169 GLY ASP THR CYS GLN VAL ALA LEU ASN PHE ALA ASN GLU SEQRES 12 A 169 GLU GLU ALA LYS LYS PHE ARG LYS ALA VAL THR ASP LEU SEQRES 13 A 169 LEU GLY ARG ARG GLN ARG LYS SER GLU LYS ARG ARG ASP HELIX 1 1 PRO A 458 LEU A 462 5 5 HELIX 2 2 TYR A 475 LEU A 479 5 5 HELIX 3 3 ASN A 620 ARG A 638 1 19 SHEET 1 A 6 TRP A 587 GLU A 590 0 SHEET 2 A 6 SER A 572 ASP A 579 -1 N LEU A 575 O GLN A 589 SHEET 3 A 6 MET A 553 ASP A 567 -1 N VAL A 565 O PHE A 574 SHEET 4 A 6 CYS A 535 ASP A 549 -1 N MET A 538 O LEU A 564 SHEET 5 A 6 GLN A 613 ASN A 617 -1 O ASN A 617 N GLN A 544 SHEET 6 A 6 PHE A 604 ALA A 608 -1 N PHE A 607 O VAL A 614 CISPEP 1 HIS A 457 PRO A 458 1 -2.83 CISPEP 2 HIS A 457 PRO A 458 2 1.11 CISPEP 3 HIS A 457 PRO A 458 3 -0.69 CISPEP 4 HIS A 457 PRO A 458 4 3.74 CISPEP 5 HIS A 457 PRO A 458 5 -0.57 CISPEP 6 HIS A 457 PRO A 458 6 -3.67 CISPEP 7 HIS A 457 PRO A 458 7 -1.84 CISPEP 8 HIS A 457 PRO A 458 8 -1.21 CISPEP 9 HIS A 457 PRO A 458 9 0.24 CISPEP 10 HIS A 457 PRO A 458 10 -1.60 CISPEP 11 HIS A 457 PRO A 458 11 1.48 CISPEP 12 HIS A 457 PRO A 458 12 -0.07 CISPEP 13 HIS A 457 PRO A 458 13 2.79 CISPEP 14 HIS A 457 PRO A 458 14 1.54 CISPEP 15 HIS A 457 PRO A 458 15 2.92 CISPEP 16 HIS A 457 PRO A 458 16 -3.38 CISPEP 17 HIS A 457 PRO A 458 17 0.92 CISPEP 18 HIS A 457 PRO A 458 18 -7.00 CISPEP 19 HIS A 457 PRO A 458 19 -3.33 CISPEP 20 HIS A 457 PRO A 458 20 0.22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1