HEADER STRUCTURAL GENOMICS/UNKNOWN FUNCTION 21-SEP-06 2IFX TITLE CRYSTAL STRUCTURE OF A PUTATIVE 4-METHYLMUCONOLACTONE METHYLISOMERASE TITLE 2 (YP_295714.1) FROM RALSTONIA EUTROPHA JMP134 AT 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUPRIAVIDUS NECATOR; SOURCE 3 ORGANISM_TAXID: 106590; SOURCE 4 GENE: YP_295714.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS YP_295714.1, HYPOTHETICAL PROTEIN, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, STRUCTURAL GENOMICS-UNKNOWN FUNCTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 25-JAN-23 2IFX 1 REMARK SEQADV LINK REVDAT 4 18-OCT-17 2IFX 1 REMARK REVDAT 3 13-JUL-11 2IFX 1 VERSN REVDAT 2 24-FEB-09 2IFX 1 VERSN REVDAT 1 10-OCT-06 2IFX 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN (YP_295714.1) FROM JRNL TITL 2 RALSTONIA EUTROPHA JMP134 AT 2.00 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 17337 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 882 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1156 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1638 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 125 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 44.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.935 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1737 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1233 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2344 ; 1.493 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2961 ; 0.861 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 207 ; 3.378 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;25.788 ;21.786 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 287 ;11.174 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;14.942 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 239 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1906 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 398 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 319 ; 0.209 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1260 ; 0.198 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 809 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 890 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 118 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 3 ; 0.193 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.285 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.147 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1252 ; 2.037 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 411 ; 0.409 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1635 ; 2.592 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 826 ; 4.729 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 705 ; 6.071 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 11 6 REMARK 3 1 B 1 B 11 6 REMARK 3 2 A 15 A 47 6 REMARK 3 2 B 15 B 47 6 REMARK 3 3 A 60 A 82 6 REMARK 3 3 B 60 B 82 6 REMARK 3 4 A 101 A 107 6 REMARK 3 4 B 101 B 107 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 1000 ; 0.610 ; 5.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1000 ; 1.760 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 48 REMARK 3 RESIDUE RANGE : A 53 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 9.2110 4.9870 67.3440 REMARK 3 T TENSOR REMARK 3 T11: -0.1006 T22: -0.2992 REMARK 3 T33: -0.1168 T12: -0.0237 REMARK 3 T13: 0.0264 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 3.9822 L22: 4.2499 REMARK 3 L33: 2.7395 L12: 0.3629 REMARK 3 L13: -1.0200 L23: 0.2921 REMARK 3 S TENSOR REMARK 3 S11: 0.1250 S12: 0.0564 S13: 0.4287 REMARK 3 S21: -0.0188 S22: -0.1545 S23: 0.2140 REMARK 3 S31: -0.1616 S32: 0.0340 S33: 0.0295 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 48 REMARK 3 RESIDUE RANGE : B 60 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): 0.0530 21.5350 75.4510 REMARK 3 T TENSOR REMARK 3 T11: -0.2208 T22: -0.2780 REMARK 3 T33: -0.0822 T12: -0.0383 REMARK 3 T13: 0.0199 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 2.4436 L22: 4.3942 REMARK 3 L33: 5.1645 L12: 0.8345 REMARK 3 L13: -1.1757 L23: -0.2466 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: -0.0246 S13: -0.0520 REMARK 3 S21: -0.2740 S22: -0.0373 S23: 0.1709 REMARK 3 S31: 0.2894 S32: -0.3019 S33: 0.1201 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. RESIDUES 49-51, 109-113 IN CHAIN A, AND 49-59, 108-113 IN CHAIN REMARK 3 B ARE DISORDERED AND NOT INCLUDED IN THE MODEL. REMARK 3 4. GLYCEROL MOLECULES FROM THE CRYO SOLUTION ARE MODELED. REMARK 3 5. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 6. THERE ARE SOME UNEXPLAINED DENSITY NEAR RESIDUES B15(SER) AND REMARK 3 B39(TYR). REMARK 3 7. SIGNIFICANT NCS DEVIATION OCCURS IN THE RESIDUE RANGE 83-100. REMARK 4 REMARK 4 2IFX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000039527. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94926, 0.97925, 0.97939 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17384 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 25.743 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CA(OAC)2, 20.0% PEG-8000, 0.1M REMARK 280 MES, PH 6.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.08000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.12000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.04000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 49 REMARK 465 ASP A 50 REMARK 465 THR A 51 REMARK 465 ASP A 109 REMARK 465 GLU A 110 REMARK 465 PRO A 111 REMARK 465 ALA A 112 REMARK 465 SER A 113 REMARK 465 THR B 49 REMARK 465 ASP B 50 REMARK 465 THR B 51 REMARK 465 HIS B 52 REMARK 465 VAL B 53 REMARK 465 PRO B 54 REMARK 465 PHE B 55 REMARK 465 PHE B 56 REMARK 465 ASP B 57 REMARK 465 ILE B 58 REMARK 465 GLY B 59 REMARK 465 GLY B 108 REMARK 465 ASP B 109 REMARK 465 GLU B 110 REMARK 465 PRO B 111 REMARK 465 ALA B 112 REMARK 465 SER B 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 54 137.54 -33.93 REMARK 500 LEU A 98 -120.11 -120.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 115 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 366988 RELATED DB: TARGETDB DBREF 2IFX A 1 113 UNP Q471R3 Q471R3_RALEJ 1 113 DBREF 2IFX B 1 113 UNP Q471R3 Q471R3_RALEJ 1 113 SEQADV 2IFX GLY A 0 UNP Q471R3 EXPRESSION TAG SEQADV 2IFX MSE A 1 UNP Q471R3 MET 1 MODIFIED RESIDUE SEQADV 2IFX MSE A 14 UNP Q471R3 MET 14 MODIFIED RESIDUE SEQADV 2IFX MSE A 29 UNP Q471R3 MET 29 MODIFIED RESIDUE SEQADV 2IFX MSE A 79 UNP Q471R3 MET 79 MODIFIED RESIDUE SEQADV 2IFX GLY B 0 UNP Q471R3 EXPRESSION TAG SEQADV 2IFX MSE B 1 UNP Q471R3 MET 1 MODIFIED RESIDUE SEQADV 2IFX MSE B 14 UNP Q471R3 MET 14 MODIFIED RESIDUE SEQADV 2IFX MSE B 29 UNP Q471R3 MET 29 MODIFIED RESIDUE SEQADV 2IFX MSE B 79 UNP Q471R3 MET 79 MODIFIED RESIDUE SEQRES 1 A 114 GLY MSE ILE ARG LEU LEU TYR LEU LEU VAL LYS PRO ALA SEQRES 2 A 114 GLY MSE SER ASP GLU THR PHE ARG ALA GLU CYS LEU ARG SEQRES 3 A 114 HIS TYR GLU MSE SER HIS ASP VAL PRO GLY LEU HIS LYS SEQRES 4 A 114 TYR GLU VAL ARG LEU VAL ALA GLU GLN PRO THR ASP THR SEQRES 5 A 114 HIS VAL PRO PHE PHE ASP ILE GLY HIS VAL ASP ALA ILE SEQRES 6 A 114 GLY GLU CYS TRP PHE LYS ASP ASP ALA ALA TYR ALA THR SEQRES 7 A 114 TYR MSE ALA SER ASP ILE ARG LYS ALA TRP PHE GLU HIS SEQRES 8 A 114 GLY LYS THR PHE ILE GLY GLN LEU LYS PRO PHE ARG THR SEQRES 9 A 114 ALA PRO VAL ALA GLY ASP GLU PRO ALA SER SEQRES 1 B 114 GLY MSE ILE ARG LEU LEU TYR LEU LEU VAL LYS PRO ALA SEQRES 2 B 114 GLY MSE SER ASP GLU THR PHE ARG ALA GLU CYS LEU ARG SEQRES 3 B 114 HIS TYR GLU MSE SER HIS ASP VAL PRO GLY LEU HIS LYS SEQRES 4 B 114 TYR GLU VAL ARG LEU VAL ALA GLU GLN PRO THR ASP THR SEQRES 5 B 114 HIS VAL PRO PHE PHE ASP ILE GLY HIS VAL ASP ALA ILE SEQRES 6 B 114 GLY GLU CYS TRP PHE LYS ASP ASP ALA ALA TYR ALA THR SEQRES 7 B 114 TYR MSE ALA SER ASP ILE ARG LYS ALA TRP PHE GLU HIS SEQRES 8 B 114 GLY LYS THR PHE ILE GLY GLN LEU LYS PRO PHE ARG THR SEQRES 9 B 114 ALA PRO VAL ALA GLY ASP GLU PRO ALA SER MODRES 2IFX MSE A 1 MET SELENOMETHIONINE MODRES 2IFX MSE A 14 MET SELENOMETHIONINE MODRES 2IFX MSE A 29 MET SELENOMETHIONINE MODRES 2IFX MSE A 79 MET SELENOMETHIONINE MODRES 2IFX MSE B 1 MET SELENOMETHIONINE MODRES 2IFX MSE B 14 MET SELENOMETHIONINE MODRES 2IFX MSE B 29 MET SELENOMETHIONINE MODRES 2IFX MSE B 79 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 14 8 HET MSE A 29 8 HET MSE A 79 8 HET MSE B 1 8 HET MSE B 14 8 HET MSE B 29 8 HET MSE B 79 8 HET CL A 114 1 HET GOL A 115 6 HET GOL B 114 12 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 CL CL 1- FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *125(H2 O) HELIX 1 1 SER A 15 HIS A 31 1 17 HELIX 2 2 ASP A 71 SER A 81 1 11 HELIX 3 3 SER A 81 ILE A 95 1 15 HELIX 4 4 SER B 15 HIS B 31 1 17 HELIX 5 5 ASP B 71 SER B 81 1 11 HELIX 6 6 SER B 81 ILE B 95 1 15 SHEET 1 A 9 ILE A 2 LEU A 8 0 SHEET 2 A 9 ALA A 63 PHE A 69 -1 O GLY A 65 N TYR A 6 SHEET 3 A 9 LYS A 38 GLU A 46 -1 N ARG A 42 O ILE A 64 SHEET 4 A 9 GLN B 97 PRO B 105 -1 O ARG B 102 N ALA A 45 SHEET 5 A 9 ILE B 2 VAL B 9 -1 N VAL B 9 O GLN B 97 SHEET 6 A 9 ALA B 63 PHE B 69 -1 O ALA B 63 N LEU B 8 SHEET 7 A 9 LYS B 38 GLU B 46 -1 N ARG B 42 O ILE B 64 SHEET 8 A 9 PHE A 101 PRO A 105 -1 N ARG A 102 O GLU B 46 SHEET 9 A 9 ILE A 2 LEU A 8 -1 N LEU A 5 O PHE A 101 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C GLY A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N SER A 15 1555 1555 1.33 LINK C GLU A 28 N MSE A 29 1555 1555 1.32 LINK C MSE A 29 N SER A 30 1555 1555 1.33 LINK C TYR A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N ALA A 80 1555 1555 1.34 LINK C GLY B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N ILE B 2 1555 1555 1.32 LINK C GLY B 13 N MSE B 14 1555 1555 1.32 LINK C MSE B 14 N SER B 15 1555 1555 1.33 LINK C GLU B 28 N MSE B 29 1555 1555 1.33 LINK C MSE B 29 N SER B 30 1555 1555 1.33 LINK C TYR B 78 N MSE B 79 1555 1555 1.32 LINK C MSE B 79 N ALA B 80 1555 1555 1.33 SITE 1 AC1 2 SER A 81 ASP A 82 SITE 1 AC2 7 PRO A 105 VAL A 106 ALA A 107 TYR B 27 SITE 2 AC2 7 GLU B 40 VAL B 41 HOH B 174 SITE 1 AC3 7 TYR A 27 GLU A 40 VAL A 41 HOH A 151 SITE 2 AC3 7 PRO B 105 VAL B 106 ALA B 107 CRYST1 46.060 46.060 124.160 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021710 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021710 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008050 0.00000