data_2IJE # _entry.id 2IJE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2IJE pdb_00002ije 10.2210/pdb2ije/pdb RCSB RCSB039644 ? ? WWPDB D_1000039644 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IJE _pdbx_database_status.recvd_initial_deposition_date 2006-09-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freedman, T.S.' 1 'Kuriyan, J.' 2 # _citation.id primary _citation.title 'A Ras-induced conformational switch in the Ras activator Son of sevenless.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 103 _citation.page_first 16692 _citation.page_last 16697 _citation.year 2006 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17075039 _citation.pdbx_database_id_DOI 10.1073/pnas.0608127103 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freedman, T.S.' 1 ? primary 'Sondermann, H.' 2 ? primary 'Friedland, G.D.' 3 ? primary 'Kortemme, T.' 4 ? primary 'Bar-Sagi, D.' 5 ? primary 'Marqusee, S.' 6 ? primary 'Kuriyan, J.' 7 ? # _cell.entry_id 2IJE _cell.length_a 75.430 _cell.length_b 77.801 _cell.length_c 110.303 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2IJE _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Guanine nucleotide-releasing protein' 27843.102 1 ? ? 'Cdc25 Domain (residues 1028-1262)' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 163 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GNRP, Ras-specific nucleotide exchange factor CDC25, CDC25Mm' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSALEIAEQLTLLDHLVFKSIPYEEFFGQGWMKAEKYERTPYIMKTTKHFNHVSNFIASEIIRNEDISARASAIEKW VAVADICRCLHNYNAVLEITSSINRSAIFRLKKTWLKVSKQTKSLLDKLQKLVSSDGRFKNLRESLRNCDPPCVPYLGMY LTDLVFIEEGTPNYTEDGLVNFSKMRMISHIIREIRQFQQTTYKIDPQPKVIQYLLDESFMLDEESLYESSLLIEPKLPT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSALEIAEQLTLLDHLVFKSIPYEEFFGQGWMKAEKYERTPYIMKTTKHFNHVSNFIASEIIRNEDISARASAIEKW VAVADICRCLHNYNAVLEITSSINRSAIFRLKKTWLKVSKQTKSLLDKLQKLVSSDGRFKNLRESLRNCDPPCVPYLGMY LTDLVFIEEGTPNYTEDGLVNFSKMRMISHIIREIRQFQQTTYKIDPQPKVIQYLLDESFMLDEESLYESSLLIEPKLPT ; _entity_poly.pdbx_strand_id S _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ALA n 1 7 LEU n 1 8 GLU n 1 9 ILE n 1 10 ALA n 1 11 GLU n 1 12 GLN n 1 13 LEU n 1 14 THR n 1 15 LEU n 1 16 LEU n 1 17 ASP n 1 18 HIS n 1 19 LEU n 1 20 VAL n 1 21 PHE n 1 22 LYS n 1 23 SER n 1 24 ILE n 1 25 PRO n 1 26 TYR n 1 27 GLU n 1 28 GLU n 1 29 PHE n 1 30 PHE n 1 31 GLY n 1 32 GLN n 1 33 GLY n 1 34 TRP n 1 35 MET n 1 36 LYS n 1 37 ALA n 1 38 GLU n 1 39 LYS n 1 40 TYR n 1 41 GLU n 1 42 ARG n 1 43 THR n 1 44 PRO n 1 45 TYR n 1 46 ILE n 1 47 MET n 1 48 LYS n 1 49 THR n 1 50 THR n 1 51 LYS n 1 52 HIS n 1 53 PHE n 1 54 ASN n 1 55 HIS n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 PHE n 1 60 ILE n 1 61 ALA n 1 62 SER n 1 63 GLU n 1 64 ILE n 1 65 ILE n 1 66 ARG n 1 67 ASN n 1 68 GLU n 1 69 ASP n 1 70 ILE n 1 71 SER n 1 72 ALA n 1 73 ARG n 1 74 ALA n 1 75 SER n 1 76 ALA n 1 77 ILE n 1 78 GLU n 1 79 LYS n 1 80 TRP n 1 81 VAL n 1 82 ALA n 1 83 VAL n 1 84 ALA n 1 85 ASP n 1 86 ILE n 1 87 CYS n 1 88 ARG n 1 89 CYS n 1 90 LEU n 1 91 HIS n 1 92 ASN n 1 93 TYR n 1 94 ASN n 1 95 ALA n 1 96 VAL n 1 97 LEU n 1 98 GLU n 1 99 ILE n 1 100 THR n 1 101 SER n 1 102 SER n 1 103 ILE n 1 104 ASN n 1 105 ARG n 1 106 SER n 1 107 ALA n 1 108 ILE n 1 109 PHE n 1 110 ARG n 1 111 LEU n 1 112 LYS n 1 113 LYS n 1 114 THR n 1 115 TRP n 1 116 LEU n 1 117 LYS n 1 118 VAL n 1 119 SER n 1 120 LYS n 1 121 GLN n 1 122 THR n 1 123 LYS n 1 124 SER n 1 125 LEU n 1 126 LEU n 1 127 ASP n 1 128 LYS n 1 129 LEU n 1 130 GLN n 1 131 LYS n 1 132 LEU n 1 133 VAL n 1 134 SER n 1 135 SER n 1 136 ASP n 1 137 GLY n 1 138 ARG n 1 139 PHE n 1 140 LYS n 1 141 ASN n 1 142 LEU n 1 143 ARG n 1 144 GLU n 1 145 SER n 1 146 LEU n 1 147 ARG n 1 148 ASN n 1 149 CYS n 1 150 ASP n 1 151 PRO n 1 152 PRO n 1 153 CYS n 1 154 VAL n 1 155 PRO n 1 156 TYR n 1 157 LEU n 1 158 GLY n 1 159 MET n 1 160 TYR n 1 161 LEU n 1 162 THR n 1 163 ASP n 1 164 LEU n 1 165 VAL n 1 166 PHE n 1 167 ILE n 1 168 GLU n 1 169 GLU n 1 170 GLY n 1 171 THR n 1 172 PRO n 1 173 ASN n 1 174 TYR n 1 175 THR n 1 176 GLU n 1 177 ASP n 1 178 GLY n 1 179 LEU n 1 180 VAL n 1 181 ASN n 1 182 PHE n 1 183 SER n 1 184 LYS n 1 185 MET n 1 186 ARG n 1 187 MET n 1 188 ILE n 1 189 SER n 1 190 HIS n 1 191 ILE n 1 192 ILE n 1 193 ARG n 1 194 GLU n 1 195 ILE n 1 196 ARG n 1 197 GLN n 1 198 PHE n 1 199 GLN n 1 200 GLN n 1 201 THR n 1 202 THR n 1 203 TYR n 1 204 LYS n 1 205 ILE n 1 206 ASP n 1 207 PRO n 1 208 GLN n 1 209 PRO n 1 210 LYS n 1 211 VAL n 1 212 ILE n 1 213 GLN n 1 214 TYR n 1 215 LEU n 1 216 LEU n 1 217 ASP n 1 218 GLU n 1 219 SER n 1 220 PHE n 1 221 MET n 1 222 LEU n 1 223 ASP n 1 224 GLU n 1 225 GLU n 1 226 SER n 1 227 LEU n 1 228 TYR n 1 229 GLU n 1 230 SER n 1 231 SER n 1 232 LEU n 1 233 LEU n 1 234 ILE n 1 235 GLU n 1 236 PRO n 1 237 LYS n 1 238 LEU n 1 239 PRO n 1 240 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene 19417 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3*' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GNRP_MOUSE _struct_ref.pdbx_db_accession P27671 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALEIAEQLTLLDHLVFKSIPYEEFFGQGWMKAEKYERTPYIMKTTKHFNHVSNFIASEIIRNEDISARASAIEKWVAVAD ICRCLHNYNAVLEITSSINRSAIFRLKKTWLKVSKQTKSLLDKLQKLVSSDGRFKNLRESLRNCDPPCVPYLGMYLTDLV FIEEGTPNYTEDGLVNFSKMRMISHIIREIRQFQQTTYKIDPQPKVIQYLLDESFMLDEESLYESSLLIEPKLPT ; _struct_ref.pdbx_align_begin 1028 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2IJE _struct_ref_seq.pdbx_strand_id S _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 240 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P27671 _struct_ref_seq.db_align_beg 1028 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1262 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1028 _struct_ref_seq.pdbx_auth_seq_align_end 1262 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2IJE GLY S 1 ? UNP P27671 ? ? 'cloning artifact' 1023 1 1 2IJE PRO S 2 ? UNP P27671 ? ? 'cloning artifact' 1024 2 1 2IJE LEU S 3 ? UNP P27671 ? ? 'cloning artifact' 1025 3 1 2IJE GLY S 4 ? UNP P27671 ? ? 'cloning artifact' 1026 4 1 2IJE SER S 5 ? UNP P27671 ? ? 'cloning artifact' 1027 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2IJE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_percent_sol 57.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pdbx_details ;1:1 Mixture of Well Solution: 0.1 M Sodium Acetate, pH 5.2, 3% PEG 4000, 0.5% beta-octylglucoside. Protein Stock: 10 mg/ml RasGRF1, 10% Glycerol, 5 mM TCEP, 25 mM Tris, pH 8.0, 200 mM Sodium Chloride. Cryoprotection: Dip in Well solution with 30% sucrose, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2005-05-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9740 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength 0.9740 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2IJE _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 50.00 _reflns.number_all 17115 _reflns.number_obs 17115 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.541 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1695 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2IJE _refine.ls_d_res_high 2.2 _refine.ls_d_res_low 50 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 16832 _refine.ls_number_reflns_obs 15478 _refine.ls_number_reflns_R_free 1533 _refine.ls_percent_reflns_obs 92 _refine.ls_R_factor_all 0.205 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.242 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 1NVV' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -2.237 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 5.959 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -3.722 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 2103 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.19484 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.007613 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.22 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2721 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3412 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 439 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2IJE _struct.title 'Crystal Structure of the Cdc25 domain of RasGRF1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IJE _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'RasGRF1, Cdc25 Domain, Ras Guanine Nucleotide Releasing Factor, Ras-specific Nucleotide Exchange Factor, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? SER A 23 ? GLY S 1023 SER S 1045 1 ? 23 HELX_P HELX_P2 2 PRO A 25 ? LYS A 36 ? PRO S 1047 LYS S 1058 5 ? 12 HELX_P HELX_P3 3 GLU A 38 ? THR A 43 ? GLU S 1060 THR S 1065 1 ? 6 HELX_P HELX_P4 4 THR A 43 ? ARG A 66 ? THR S 1065 ARG S 1088 1 ? 24 HELX_P HELX_P5 5 ASP A 69 ? LEU A 90 ? ASP S 1091 LEU S 1112 1 ? 22 HELX_P HELX_P6 6 ASN A 92 ? ASN A 104 ? ASN S 1114 ASN S 1126 1 ? 13 HELX_P HELX_P7 7 ARG A 105 ? ARG A 110 ? ARG S 1127 ARG S 1132 1 ? 6 HELX_P HELX_P8 8 LEU A 111 ? LYS A 117 ? LEU S 1133 LYS S 1139 1 ? 7 HELX_P HELX_P9 9 SER A 119 ? VAL A 133 ? SER S 1141 VAL S 1155 1 ? 15 HELX_P HELX_P10 10 SER A 135 ? ASN A 148 ? SER S 1157 ASN S 1170 1 ? 14 HELX_P HELX_P11 11 TYR A 156 ? THR A 171 ? TYR S 1178 THR S 1193 1 ? 16 HELX_P HELX_P12 12 ASN A 181 ? THR A 201 ? ASN S 1203 THR S 1223 1 ? 21 HELX_P HELX_P13 13 GLN A 208 ? ASP A 217 ? GLN S 1230 ASP S 1239 1 ? 10 HELX_P HELX_P14 14 ASP A 223 ? GLU A 235 ? ASP S 1245 GLU S 1257 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 151 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 1173 _struct_mon_prot_cis.auth_asym_id S _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 152 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 1174 _struct_mon_prot_cis.pdbx_auth_asym_id_2 S _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.09 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id S _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 170 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE GOL S 170' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ILE A 65 ? ILE S 1087 . ? 1_555 ? 2 AC1 9 ARG A 66 ? ARG S 1088 . ? 1_555 ? 3 AC1 9 ASN A 67 ? ASN S 1089 . ? 1_555 ? 4 AC1 9 GLU A 68 ? GLU S 1090 . ? 1_555 ? 5 AC1 9 ARG A 73 ? ARG S 1095 . ? 1_555 ? 6 AC1 9 LEU A 179 ? LEU S 1201 . ? 7_445 ? 7 AC1 9 VAL A 180 ? VAL S 1202 . ? 7_445 ? 8 AC1 9 PHE A 182 ? PHE S 1204 . ? 7_445 ? 9 AC1 9 ILE A 234 ? ILE S 1256 . ? 1_555 ? # _database_PDB_matrix.entry_id 2IJE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2IJE _atom_sites.fract_transf_matrix[1][1] 0.013257 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012853 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009066 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1023 1023 GLY GLY S . n A 1 2 PRO 2 1024 1024 PRO PRO S . n A 1 3 LEU 3 1025 1025 LEU LEU S . n A 1 4 GLY 4 1026 1026 GLY GLY S . n A 1 5 SER 5 1027 1027 SER SER S . n A 1 6 ALA 6 1028 1028 ALA ALA S . n A 1 7 LEU 7 1029 1029 LEU LEU S . n A 1 8 GLU 8 1030 1030 GLU GLU S . n A 1 9 ILE 9 1031 1031 ILE ILE S . n A 1 10 ALA 10 1032 1032 ALA ALA S . n A 1 11 GLU 11 1033 1033 GLU GLU S . n A 1 12 GLN 12 1034 1034 GLN GLN S . n A 1 13 LEU 13 1035 1035 LEU LEU S . n A 1 14 THR 14 1036 1036 THR THR S . n A 1 15 LEU 15 1037 1037 LEU LEU S . n A 1 16 LEU 16 1038 1038 LEU LEU S . n A 1 17 ASP 17 1039 1039 ASP ASP S . n A 1 18 HIS 18 1040 1040 HIS HIS S . n A 1 19 LEU 19 1041 1041 LEU LEU S . n A 1 20 VAL 20 1042 1042 VAL VAL S . n A 1 21 PHE 21 1043 1043 PHE PHE S . n A 1 22 LYS 22 1044 1044 LYS LYS S . n A 1 23 SER 23 1045 1045 SER SER S . n A 1 24 ILE 24 1046 1046 ILE ILE S . n A 1 25 PRO 25 1047 1047 PRO PRO S . n A 1 26 TYR 26 1048 1048 TYR TYR S . n A 1 27 GLU 27 1049 1049 GLU GLU S . n A 1 28 GLU 28 1050 1050 GLU GLU S . n A 1 29 PHE 29 1051 1051 PHE PHE S . n A 1 30 PHE 30 1052 1052 PHE PHE S . n A 1 31 GLY 31 1053 1053 GLY GLY S . n A 1 32 GLN 32 1054 1054 GLN GLN S . n A 1 33 GLY 33 1055 1055 GLY GLY S . n A 1 34 TRP 34 1056 1056 TRP TRP S . n A 1 35 MET 35 1057 1057 MET MET S . n A 1 36 LYS 36 1058 1058 LYS LYS S . n A 1 37 ALA 37 1059 1059 ALA ALA S . n A 1 38 GLU 38 1060 1060 GLU GLU S . n A 1 39 LYS 39 1061 1061 LYS LYS S . n A 1 40 TYR 40 1062 1062 TYR TYR S . n A 1 41 GLU 41 1063 1063 GLU GLU S . n A 1 42 ARG 42 1064 1064 ARG ARG S . n A 1 43 THR 43 1065 1065 THR THR S . n A 1 44 PRO 44 1066 1066 PRO PRO S . n A 1 45 TYR 45 1067 1067 TYR TYR S . n A 1 46 ILE 46 1068 1068 ILE ILE S . n A 1 47 MET 47 1069 1069 MET MET S . n A 1 48 LYS 48 1070 1070 LYS LYS S . n A 1 49 THR 49 1071 1071 THR THR S . n A 1 50 THR 50 1072 1072 THR THR S . n A 1 51 LYS 51 1073 1073 LYS LYS S . n A 1 52 HIS 52 1074 1074 HIS HIS S . n A 1 53 PHE 53 1075 1075 PHE PHE S . n A 1 54 ASN 54 1076 1076 ASN ASN S . n A 1 55 HIS 55 1077 1077 HIS HIS S . n A 1 56 VAL 56 1078 1078 VAL VAL S . n A 1 57 SER 57 1079 1079 SER SER S . n A 1 58 ASN 58 1080 1080 ASN ASN S . n A 1 59 PHE 59 1081 1081 PHE PHE S . n A 1 60 ILE 60 1082 1082 ILE ILE S . n A 1 61 ALA 61 1083 1083 ALA ALA S . n A 1 62 SER 62 1084 1084 SER SER S . n A 1 63 GLU 63 1085 1085 GLU GLU S . n A 1 64 ILE 64 1086 1086 ILE ILE S . n A 1 65 ILE 65 1087 1087 ILE ILE S . n A 1 66 ARG 66 1088 1088 ARG ARG S . n A 1 67 ASN 67 1089 1089 ASN ASN S . n A 1 68 GLU 68 1090 1090 GLU GLU S . n A 1 69 ASP 69 1091 1091 ASP ASP S . n A 1 70 ILE 70 1092 1092 ILE ILE S . n A 1 71 SER 71 1093 1093 SER SER S . n A 1 72 ALA 72 1094 1094 ALA ALA S . n A 1 73 ARG 73 1095 1095 ARG ARG S . n A 1 74 ALA 74 1096 1096 ALA ALA S . n A 1 75 SER 75 1097 1097 SER SER S . n A 1 76 ALA 76 1098 1098 ALA ALA S . n A 1 77 ILE 77 1099 1099 ILE ILE S . n A 1 78 GLU 78 1100 1100 GLU GLU S . n A 1 79 LYS 79 1101 1101 LYS LYS S . n A 1 80 TRP 80 1102 1102 TRP TRP S . n A 1 81 VAL 81 1103 1103 VAL VAL S . n A 1 82 ALA 82 1104 1104 ALA ALA S . n A 1 83 VAL 83 1105 1105 VAL VAL S . n A 1 84 ALA 84 1106 1106 ALA ALA S . n A 1 85 ASP 85 1107 1107 ASP ASP S . n A 1 86 ILE 86 1108 1108 ILE ILE S . n A 1 87 CYS 87 1109 1109 CYS CYS S . n A 1 88 ARG 88 1110 1110 ARG ARG S . n A 1 89 CYS 89 1111 1111 CYS CYS S . n A 1 90 LEU 90 1112 1112 LEU LEU S . n A 1 91 HIS 91 1113 1113 HIS HIS S . n A 1 92 ASN 92 1114 1114 ASN ASN S . n A 1 93 TYR 93 1115 1115 TYR TYR S . n A 1 94 ASN 94 1116 1116 ASN ASN S . n A 1 95 ALA 95 1117 1117 ALA ALA S . n A 1 96 VAL 96 1118 1118 VAL VAL S . n A 1 97 LEU 97 1119 1119 LEU LEU S . n A 1 98 GLU 98 1120 1120 GLU GLU S . n A 1 99 ILE 99 1121 1121 ILE ILE S . n A 1 100 THR 100 1122 1122 THR THR S . n A 1 101 SER 101 1123 1123 SER SER S . n A 1 102 SER 102 1124 1124 SER SER S . n A 1 103 ILE 103 1125 1125 ILE ILE S . n A 1 104 ASN 104 1126 1126 ASN ASN S . n A 1 105 ARG 105 1127 1127 ARG ARG S . n A 1 106 SER 106 1128 1128 SER SER S . n A 1 107 ALA 107 1129 1129 ALA ALA S . n A 1 108 ILE 108 1130 1130 ILE ILE S . n A 1 109 PHE 109 1131 1131 PHE PHE S . n A 1 110 ARG 110 1132 1132 ARG ARG S . n A 1 111 LEU 111 1133 1133 LEU LEU S . n A 1 112 LYS 112 1134 1134 LYS LYS S . n A 1 113 LYS 113 1135 1135 LYS LYS S . n A 1 114 THR 114 1136 1136 THR THR S . n A 1 115 TRP 115 1137 1137 TRP TRP S . n A 1 116 LEU 116 1138 1138 LEU LEU S . n A 1 117 LYS 117 1139 1139 LYS LYS S . n A 1 118 VAL 118 1140 1140 VAL VAL S . n A 1 119 SER 119 1141 1141 SER SER S . n A 1 120 LYS 120 1142 1142 LYS LYS S . n A 1 121 GLN 121 1143 1143 GLN GLN S . n A 1 122 THR 122 1144 1144 THR THR S . n A 1 123 LYS 123 1145 1145 LYS LYS S . n A 1 124 SER 124 1146 1146 SER SER S . n A 1 125 LEU 125 1147 1147 LEU LEU S . n A 1 126 LEU 126 1148 1148 LEU LEU S . n A 1 127 ASP 127 1149 1149 ASP ASP S . n A 1 128 LYS 128 1150 1150 LYS LYS S . n A 1 129 LEU 129 1151 1151 LEU LEU S . n A 1 130 GLN 130 1152 1152 GLN GLN S . n A 1 131 LYS 131 1153 1153 LYS LYS S . n A 1 132 LEU 132 1154 1154 LEU LEU S . n A 1 133 VAL 133 1155 1155 VAL VAL S . n A 1 134 SER 134 1156 1156 SER SER S . n A 1 135 SER 135 1157 1157 SER SER S . n A 1 136 ASP 136 1158 1158 ASP ASP S . n A 1 137 GLY 137 1159 1159 GLY GLY S . n A 1 138 ARG 138 1160 1160 ARG ARG S . n A 1 139 PHE 139 1161 1161 PHE PHE S . n A 1 140 LYS 140 1162 1162 LYS LYS S . n A 1 141 ASN 141 1163 1163 ASN ASN S . n A 1 142 LEU 142 1164 1164 LEU LEU S . n A 1 143 ARG 143 1165 1165 ARG ARG S . n A 1 144 GLU 144 1166 1166 GLU GLU S . n A 1 145 SER 145 1167 1167 SER SER S . n A 1 146 LEU 146 1168 1168 LEU LEU S . n A 1 147 ARG 147 1169 1169 ARG ARG S . n A 1 148 ASN 148 1170 1170 ASN ASN S . n A 1 149 CYS 149 1171 1171 CYS CYS S . n A 1 150 ASP 150 1172 1172 ASP ASP S . n A 1 151 PRO 151 1173 1173 PRO PRO S . n A 1 152 PRO 152 1174 1174 PRO PRO S . n A 1 153 CYS 153 1175 1175 CYS CYS S . n A 1 154 VAL 154 1176 1176 VAL VAL S . n A 1 155 PRO 155 1177 1177 PRO PRO S . n A 1 156 TYR 156 1178 1178 TYR TYR S . n A 1 157 LEU 157 1179 1179 LEU LEU S . n A 1 158 GLY 158 1180 1180 GLY GLY S . n A 1 159 MET 159 1181 1181 MET MET S . n A 1 160 TYR 160 1182 1182 TYR TYR S . n A 1 161 LEU 161 1183 1183 LEU LEU S . n A 1 162 THR 162 1184 1184 THR THR S . n A 1 163 ASP 163 1185 1185 ASP ASP S . n A 1 164 LEU 164 1186 1186 LEU LEU S . n A 1 165 VAL 165 1187 1187 VAL VAL S . n A 1 166 PHE 166 1188 1188 PHE PHE S . n A 1 167 ILE 167 1189 1189 ILE ILE S . n A 1 168 GLU 168 1190 1190 GLU GLU S . n A 1 169 GLU 169 1191 1191 GLU GLU S . n A 1 170 GLY 170 1192 1192 GLY GLY S . n A 1 171 THR 171 1193 1193 THR THR S . n A 1 172 PRO 172 1194 1194 PRO PRO S . n A 1 173 ASN 173 1195 1195 ASN ASN S . n A 1 174 TYR 174 1196 1196 TYR TYR S . n A 1 175 THR 175 1197 1197 THR THR S . n A 1 176 GLU 176 1198 1198 GLU GLU S . n A 1 177 ASP 177 1199 1199 ASP ASP S . n A 1 178 GLY 178 1200 1200 GLY GLY S . n A 1 179 LEU 179 1201 1201 LEU LEU S . n A 1 180 VAL 180 1202 1202 VAL VAL S . n A 1 181 ASN 181 1203 1203 ASN ASN S . n A 1 182 PHE 182 1204 1204 PHE PHE S . n A 1 183 SER 183 1205 1205 SER SER S . n A 1 184 LYS 184 1206 1206 LYS LYS S . n A 1 185 MET 185 1207 1207 MET MET S . n A 1 186 ARG 186 1208 1208 ARG ARG S . n A 1 187 MET 187 1209 1209 MET MET S . n A 1 188 ILE 188 1210 1210 ILE ILE S . n A 1 189 SER 189 1211 1211 SER SER S . n A 1 190 HIS 190 1212 1212 HIS HIS S . n A 1 191 ILE 191 1213 1213 ILE ILE S . n A 1 192 ILE 192 1214 1214 ILE ILE S . n A 1 193 ARG 193 1215 1215 ARG ARG S . n A 1 194 GLU 194 1216 1216 GLU GLU S . n A 1 195 ILE 195 1217 1217 ILE ILE S . n A 1 196 ARG 196 1218 1218 ARG ARG S . n A 1 197 GLN 197 1219 1219 GLN GLN S . n A 1 198 PHE 198 1220 1220 PHE PHE S . n A 1 199 GLN 199 1221 1221 GLN GLN S . n A 1 200 GLN 200 1222 1222 GLN GLN S . n A 1 201 THR 201 1223 1223 THR THR S . n A 1 202 THR 202 1224 1224 THR THR S . n A 1 203 TYR 203 1225 1225 TYR TYR S . n A 1 204 LYS 204 1226 1226 LYS LYS S . n A 1 205 ILE 205 1227 1227 ILE ILE S . n A 1 206 ASP 206 1228 1228 ASP ASP S . n A 1 207 PRO 207 1229 1229 PRO PRO S . n A 1 208 GLN 208 1230 1230 GLN GLN S . n A 1 209 PRO 209 1231 1231 PRO PRO S . n A 1 210 LYS 210 1232 1232 LYS LYS S . n A 1 211 VAL 211 1233 1233 VAL VAL S . n A 1 212 ILE 212 1234 1234 ILE ILE S . n A 1 213 GLN 213 1235 1235 GLN GLN S . n A 1 214 TYR 214 1236 1236 TYR TYR S . n A 1 215 LEU 215 1237 1237 LEU LEU S . n A 1 216 LEU 216 1238 1238 LEU LEU S . n A 1 217 ASP 217 1239 1239 ASP ASP S . n A 1 218 GLU 218 1240 1240 GLU GLU S . n A 1 219 SER 219 1241 1241 SER SER S . n A 1 220 PHE 220 1242 1242 PHE PHE S . n A 1 221 MET 221 1243 1243 MET MET S . n A 1 222 LEU 222 1244 1244 LEU LEU S . n A 1 223 ASP 223 1245 1245 ASP ASP S . n A 1 224 GLU 224 1246 1246 GLU GLU S . n A 1 225 GLU 225 1247 1247 GLU GLU S . n A 1 226 SER 226 1248 1248 SER SER S . n A 1 227 LEU 227 1249 1249 LEU LEU S . n A 1 228 TYR 228 1250 1250 TYR TYR S . n A 1 229 GLU 229 1251 1251 GLU GLU S . n A 1 230 SER 230 1252 1252 SER SER S . n A 1 231 SER 231 1253 1253 SER SER S . n A 1 232 LEU 232 1254 1254 LEU LEU S . n A 1 233 LEU 233 1255 1255 LEU LEU S . n A 1 234 ILE 234 1256 1256 ILE ILE S . n A 1 235 GLU 235 1257 1257 GLU GLU S . n A 1 236 PRO 236 1258 1258 PRO PRO S . n A 1 237 LYS 237 1259 1259 LYS LYS S . n A 1 238 LEU 238 1260 ? ? ? S . n A 1 239 PRO 239 1261 ? ? ? S . n A 1 240 THR 240 1262 ? ? ? S . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 170 170 GOL GOL S . C 3 HOH 1 1 1 HOH HOH S . C 3 HOH 2 2 2 HOH HOH S . C 3 HOH 3 3 3 HOH HOH S . C 3 HOH 4 4 4 HOH HOH S . C 3 HOH 5 5 5 HOH HOH S . C 3 HOH 6 6 6 HOH HOH S . C 3 HOH 7 7 7 HOH HOH S . C 3 HOH 8 8 8 HOH HOH S . C 3 HOH 9 9 9 HOH HOH S . C 3 HOH 10 10 10 HOH HOH S . C 3 HOH 11 11 11 HOH HOH S . C 3 HOH 12 12 12 HOH HOH S . C 3 HOH 13 13 13 HOH HOH S . C 3 HOH 14 14 14 HOH HOH S . C 3 HOH 15 15 15 HOH HOH S . C 3 HOH 16 16 16 HOH HOH S . C 3 HOH 17 17 17 HOH HOH S . C 3 HOH 18 18 18 HOH HOH S . C 3 HOH 19 19 19 HOH HOH S . C 3 HOH 20 20 20 HOH HOH S . C 3 HOH 21 21 21 HOH HOH S . C 3 HOH 22 22 22 HOH HOH S . C 3 HOH 23 23 23 HOH HOH S . C 3 HOH 24 24 24 HOH HOH S . C 3 HOH 25 25 25 HOH HOH S . C 3 HOH 26 26 26 HOH HOH S . C 3 HOH 27 27 27 HOH HOH S . C 3 HOH 28 28 28 HOH HOH S . C 3 HOH 29 29 29 HOH HOH S . C 3 HOH 30 30 30 HOH HOH S . C 3 HOH 31 31 31 HOH HOH S . C 3 HOH 32 32 32 HOH HOH S . C 3 HOH 33 33 33 HOH HOH S . C 3 HOH 34 34 34 HOH HOH S . C 3 HOH 35 35 35 HOH HOH S . C 3 HOH 36 36 36 HOH HOH S . C 3 HOH 37 37 37 HOH HOH S . C 3 HOH 38 38 38 HOH HOH S . C 3 HOH 39 39 39 HOH HOH S . C 3 HOH 40 40 40 HOH HOH S . C 3 HOH 41 41 41 HOH HOH S . C 3 HOH 42 42 42 HOH HOH S . C 3 HOH 43 43 43 HOH HOH S . C 3 HOH 44 44 44 HOH HOH S . C 3 HOH 45 45 45 HOH HOH S . C 3 HOH 46 46 46 HOH HOH S . C 3 HOH 47 47 47 HOH HOH S . C 3 HOH 48 48 48 HOH HOH S . C 3 HOH 49 49 49 HOH HOH S . C 3 HOH 50 50 50 HOH HOH S . C 3 HOH 51 51 51 HOH HOH S . C 3 HOH 52 52 52 HOH HOH S . C 3 HOH 53 53 53 HOH HOH S . C 3 HOH 54 54 54 HOH HOH S . C 3 HOH 55 55 55 HOH HOH S . C 3 HOH 56 56 56 HOH HOH S . C 3 HOH 57 57 57 HOH HOH S . C 3 HOH 58 58 58 HOH HOH S . C 3 HOH 59 59 59 HOH HOH S . C 3 HOH 60 60 60 HOH HOH S . C 3 HOH 61 61 61 HOH HOH S . C 3 HOH 62 62 62 HOH HOH S . C 3 HOH 63 63 63 HOH HOH S . C 3 HOH 64 64 64 HOH HOH S . C 3 HOH 65 65 65 HOH HOH S . C 3 HOH 66 66 66 HOH HOH S . C 3 HOH 67 67 67 HOH HOH S . C 3 HOH 68 68 68 HOH HOH S . C 3 HOH 69 69 69 HOH HOH S . C 3 HOH 70 70 70 HOH HOH S . C 3 HOH 71 71 71 HOH HOH S . C 3 HOH 72 72 72 HOH HOH S . C 3 HOH 73 74 74 HOH HOH S . C 3 HOH 74 75 75 HOH HOH S . C 3 HOH 75 76 76 HOH HOH S . C 3 HOH 76 77 77 HOH HOH S . C 3 HOH 77 78 78 HOH HOH S . C 3 HOH 78 79 79 HOH HOH S . C 3 HOH 79 80 80 HOH HOH S . C 3 HOH 80 81 81 HOH HOH S . C 3 HOH 81 82 82 HOH HOH S . C 3 HOH 82 83 83 HOH HOH S . C 3 HOH 83 84 84 HOH HOH S . C 3 HOH 84 85 85 HOH HOH S . C 3 HOH 85 86 86 HOH HOH S . C 3 HOH 86 87 87 HOH HOH S . C 3 HOH 87 88 88 HOH HOH S . C 3 HOH 88 89 89 HOH HOH S . C 3 HOH 89 90 90 HOH HOH S . C 3 HOH 90 91 91 HOH HOH S . C 3 HOH 91 92 92 HOH HOH S . C 3 HOH 92 93 93 HOH HOH S . C 3 HOH 93 94 94 HOH HOH S . C 3 HOH 94 95 95 HOH HOH S . C 3 HOH 95 96 96 HOH HOH S . C 3 HOH 96 97 97 HOH HOH S . C 3 HOH 97 98 98 HOH HOH S . C 3 HOH 98 99 99 HOH HOH S . C 3 HOH 99 100 100 HOH HOH S . C 3 HOH 100 101 101 HOH HOH S . C 3 HOH 101 102 102 HOH HOH S . C 3 HOH 102 103 103 HOH HOH S . C 3 HOH 103 104 104 HOH HOH S . C 3 HOH 104 105 105 HOH HOH S . C 3 HOH 105 106 106 HOH HOH S . C 3 HOH 106 107 107 HOH HOH S . C 3 HOH 107 108 108 HOH HOH S . C 3 HOH 108 109 109 HOH HOH S . C 3 HOH 109 110 110 HOH HOH S . C 3 HOH 110 111 111 HOH HOH S . C 3 HOH 111 112 112 HOH HOH S . C 3 HOH 112 113 113 HOH HOH S . C 3 HOH 113 114 114 HOH HOH S . C 3 HOH 114 115 115 HOH HOH S . C 3 HOH 115 116 116 HOH HOH S . C 3 HOH 116 117 117 HOH HOH S . C 3 HOH 117 118 118 HOH HOH S . C 3 HOH 118 119 119 HOH HOH S . C 3 HOH 119 120 120 HOH HOH S . C 3 HOH 120 121 121 HOH HOH S . C 3 HOH 121 122 122 HOH HOH S . C 3 HOH 122 123 123 HOH HOH S . C 3 HOH 123 124 124 HOH HOH S . C 3 HOH 124 125 125 HOH HOH S . C 3 HOH 125 126 126 HOH HOH S . C 3 HOH 126 127 127 HOH HOH S . C 3 HOH 127 128 128 HOH HOH S . C 3 HOH 128 129 129 HOH HOH S . C 3 HOH 129 130 130 HOH HOH S . C 3 HOH 130 131 131 HOH HOH S . C 3 HOH 131 132 132 HOH HOH S . C 3 HOH 132 133 133 HOH HOH S . C 3 HOH 133 134 134 HOH HOH S . C 3 HOH 134 135 135 HOH HOH S . C 3 HOH 135 136 136 HOH HOH S . C 3 HOH 136 137 137 HOH HOH S . C 3 HOH 137 138 138 HOH HOH S . C 3 HOH 138 139 139 HOH HOH S . C 3 HOH 139 140 140 HOH HOH S . C 3 HOH 140 141 141 HOH HOH S . C 3 HOH 141 142 142 HOH HOH S . C 3 HOH 142 143 143 HOH HOH S . C 3 HOH 143 144 144 HOH HOH S . C 3 HOH 144 145 145 HOH HOH S . C 3 HOH 145 146 146 HOH HOH S . C 3 HOH 146 147 147 HOH HOH S . C 3 HOH 147 148 148 HOH HOH S . C 3 HOH 148 149 149 HOH HOH S . C 3 HOH 149 150 150 HOH HOH S . C 3 HOH 150 151 151 HOH HOH S . C 3 HOH 151 152 152 HOH HOH S . C 3 HOH 152 153 153 HOH HOH S . C 3 HOH 153 154 154 HOH HOH S . C 3 HOH 154 157 157 HOH HOH S . C 3 HOH 155 158 158 HOH HOH S . C 3 HOH 156 159 159 HOH HOH S . C 3 HOH 157 160 160 HOH HOH S . C 3 HOH 158 161 161 HOH HOH S . C 3 HOH 159 162 162 HOH HOH S . C 3 HOH 160 166 166 HOH HOH S . C 3 HOH 161 167 167 HOH HOH S . C 3 HOH 162 168 168 HOH HOH S . C 3 HOH 163 169 169 HOH HOH S . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-31 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2014-04-30 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASES phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN S 1054 ? ? 34.58 45.11 2 1 ASN S 1170 ? ? -101.15 47.83 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 S LEU 1260 ? A LEU 238 2 1 Y 1 S PRO 1261 ? A PRO 239 3 1 Y 1 S THR 1262 ? A THR 240 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1NVV _pdbx_initial_refinement_model.details 'pdb entry 1NVV' #