HEADER ISOMERASE 05-OCT-06 2IN3 TITLE CRYSTAL STRUCTURE OF A PUTATIVE PROTEIN DISULFIDE ISOMERASE FROM TITLE 2 NITROSOMONAS EUROPAEA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE PROTEIN DISULFIDE ISOMERASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NITROSOMONAS EUROPAEA; SOURCE 3 ORGANISM_TAXID: 915; SOURCE 4 ATCC: 19718; SOURCE 5 GENE: NE2553; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS DSBA FAMILY, FRNE-LIKE SUBFAMILY, DISULFIDE ISOMERASE, STRUCTURAL KEYWDS 2 GENOMICS, NITROSOMONAS EUROPAEA, PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,T.SKARINA,O.ONOPRIYENKO,A.EDWARDS,A.SAVCHENKO,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 18-OCT-17 2IN3 1 REMARK REVDAT 3 13-JUL-11 2IN3 1 VERSN REVDAT 2 24-FEB-09 2IN3 1 VERSN REVDAT 1 21-NOV-06 2IN3 0 JRNL AUTH M.E.CUFF,T.SKARINA,O.ONOPRIYENKO,A.EDWARDS,A.SAVCHENKO, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE PROTEIN DISULFIDE ISOMERASE JRNL TITL 2 FROM NITROSOMONAS EUROPAEA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 19340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1050 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 941 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 64.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1631 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 47.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.77000 REMARK 3 B22 (A**2) : 2.20000 REMARK 3 B33 (A**2) : 0.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.494 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1734 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2361 ; 1.358 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 210 ; 5.175 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;35.409 ;23.671 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 269 ;12.797 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;17.644 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 255 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1331 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 846 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1182 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 146 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.145 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1075 ; 0.957 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1693 ; 1.276 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 767 ; 2.117 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 667 ; 3.261 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 51 REMARK 3 ORIGIN FOR THE GROUP (A): 40.0572 46.2850 12.9556 REMARK 3 T TENSOR REMARK 3 T11: -0.1686 T22: -0.1426 REMARK 3 T33: -0.2134 T12: 0.0099 REMARK 3 T13: 0.0013 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 2.5977 L22: 7.1242 REMARK 3 L33: 4.5137 L12: 1.1779 REMARK 3 L13: 0.5240 L23: -2.5603 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.1881 S13: -0.0788 REMARK 3 S21: 0.0406 S22: 0.0970 S23: 0.3051 REMARK 3 S31: 0.1506 S32: -0.2802 S33: -0.1308 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0487 58.4852 3.6554 REMARK 3 T TENSOR REMARK 3 T11: -0.1429 T22: -0.0740 REMARK 3 T33: -0.1892 T12: -0.0051 REMARK 3 T13: -0.0318 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 5.2275 L22: 3.1770 REMARK 3 L33: 2.9234 L12: 2.2934 REMARK 3 L13: 1.4081 L23: 1.6304 REMARK 3 S TENSOR REMARK 3 S11: -0.2987 S12: 0.7914 S13: 0.1758 REMARK 3 S21: -0.2811 S22: 0.1643 S23: -0.0234 REMARK 3 S31: -0.4817 S32: 0.0322 S33: 0.1344 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): 35.0629 47.6020 11.3117 REMARK 3 T TENSOR REMARK 3 T11: -0.2102 T22: -0.1129 REMARK 3 T33: -0.1128 T12: 0.0151 REMARK 3 T13: -0.0049 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 3.5012 L22: 1.9384 REMARK 3 L33: 4.2047 L12: -0.2576 REMARK 3 L13: 1.6522 L23: -1.1113 REMARK 3 S TENSOR REMARK 3 S11: -0.0974 S12: 0.1592 S13: -0.2148 REMARK 3 S21: 0.1981 S22: 0.0957 S23: 0.1018 REMARK 3 S31: -0.1605 S32: -0.4995 S33: 0.0017 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2IN3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000039771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930, 0.97946 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20391 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 31.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.33000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MM POTASSIUM PHOSPHATE, 20% PEG REMARK 280 8000, 2% TACSIMATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.42200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.22500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.82100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.22500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.42200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.82100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN. AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 AUTHORS STATE THAT THIS PROTEIN IS A PUTATIVE ISOMERASE, REMARK 400 SINCE NO EXPERIMENTS HAVE BEEN DONE SO FAR TO VERIFY THAT. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 MSE A 3 REMARK 465 GLY A 45 REMARK 465 LEU A 46 REMARK 465 ARG A 47 REMARK 465 PRO A 48 REMARK 465 VAL A 212 REMARK 465 GLY A 213 REMARK 465 SER A 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 32 O HOH A 359 1.96 REMARK 500 O4 PO4 A 215 O HOH A 331 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 220 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC5894 RELATED DB: TARGETDB DBREF 2IN3 A 1 212 UNP Q82S11 Q82S11_NITEU 1 212 SEQADV 2IN3 GLY A -1 UNP Q82S11 CLONING ARTIFACT SEQADV 2IN3 HIS A 0 UNP Q82S11 CLONING ARTIFACT SEQADV 2IN3 MSE A 1 UNP Q82S11 MET 1 MODIFIED RESIDUE SEQADV 2IN3 MSE A 3 UNP Q82S11 MET 3 MODIFIED RESIDUE SEQADV 2IN3 MSE A 15 UNP Q82S11 MET 15 MODIFIED RESIDUE SEQADV 2IN3 MSE A 42 UNP Q82S11 MET 42 MODIFIED RESIDUE SEQADV 2IN3 GLY A 213 UNP Q82S11 CLONING ARTIFACT SEQADV 2IN3 SER A 214 UNP Q82S11 CLONING ARTIFACT SEQRES 1 A 216 GLY HIS MSE ALA MSE GLU LYS PRO VAL LEU TRP TYR ILE SEQRES 2 A 216 ALA ASP PRO MSE CYS SER TRP CYS TRP GLY PHE ALA PRO SEQRES 3 A 216 VAL ILE GLU ASN ILE ARG GLN GLU TYR SER ALA PHE LEU SEQRES 4 A 216 THR VAL LYS ILE MSE PRO GLY GLY LEU ARG PRO GLY THR SEQRES 5 A 216 ASN THR PRO LEU LEU PRO GLU LYS ARG ALA GLN ILE LEU SEQRES 6 A 216 HIS HIS TRP HIS SER VAL HIS ILE THR THR GLY GLN PRO SEQRES 7 A 216 PHE THR PHE GLU ASN ALA LEU PRO GLU GLY PHE ILE TYR SEQRES 8 A 216 ASP THR GLU PRO ALA CYS ARG GLY VAL VAL SER VAL SER SEQRES 9 A 216 LEU ILE GLU PRO GLU LYS VAL PHE PRO PHE PHE ALA ALA SEQRES 10 A 216 ILE GLN ARG ALA PHE TYR VAL GLY GLN GLU ASP VAL ALA SEQRES 11 A 216 GLN LEU ALA ILE LEU LYS LYS LEU ALA VAL ASP LEU GLY SEQRES 12 A 216 ILE PRO GLU SER ARG PHE THR PRO VAL PHE GLN SER ASP SEQRES 13 A 216 GLU ALA LYS GLN ARG THR LEU ALA GLY PHE GLN ARG VAL SEQRES 14 A 216 ALA GLN TRP GLY ILE SER GLY PHE PRO ALA LEU VAL VAL SEQRES 15 A 216 GLU SER GLY THR ASP ARG TYR LEU ILE THR THR GLY TYR SEQRES 16 A 216 ARG PRO ILE GLU ALA LEU ARG GLN LEU LEU ASP THR TRP SEQRES 17 A 216 LEU GLN GLN HIS GLY VAL GLY SER MODRES 2IN3 MSE A 15 MET SELENOMETHIONINE MODRES 2IN3 MSE A 42 MET SELENOMETHIONINE HET MSE A 15 8 HET MSE A 42 8 HET PO4 A 215 5 HET EDO A 216 4 HET EDO A 217 4 HET EDO A 218 4 HET EDO A 219 4 HET GOL A 220 6 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 PO4 O4 P 3- FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *180(H2 O) HELIX 1 1 CYS A 16 SER A 34 1 19 HELIX 2 2 LEU A 55 GLY A 74 1 20 HELIX 3 3 THR A 91 GLU A 105 1 15 HELIX 4 4 LYS A 108 VAL A 122 1 15 HELIX 5 5 GLN A 129 LEU A 140 1 12 HELIX 6 6 PRO A 143 SER A 153 1 11 HELIX 7 7 SER A 153 TRP A 170 1 18 HELIX 8 8 PRO A 195 HIS A 210 1 16 SHEET 1 A 4 THR A 38 PRO A 43 0 SHEET 2 A 4 VAL A 7 ALA A 12 1 N TYR A 10 O LYS A 40 SHEET 3 A 4 ALA A 177 SER A 182 -1 O VAL A 179 N TRP A 9 SHEET 4 A 4 ASP A 185 THR A 190 -1 O ILE A 189 N LEU A 178 LINK C PRO A 14 N MSE A 15 1555 1555 1.34 LINK C MSE A 15 N CYS A 16 1555 1555 1.33 LINK C ILE A 41 N MSE A 42 1555 1555 1.33 LINK C MSE A 42 N PRO A 43 1555 1555 1.34 CISPEP 1 PHE A 175 PRO A 176 0 -0.35 SITE 1 AC1 6 SER A 17 ILE A 62 HIS A 65 HOH A 224 SITE 2 AC1 6 HOH A 331 HOH A 389 SITE 1 AC2 5 TRP A 20 LEU A 103 ARG A 118 VAL A 150 SITE 2 AC2 5 HOH A 287 SITE 1 AC3 5 GLU A 32 SER A 68 ILE A 71 ASP A 204 SITE 2 AC3 5 HOH A 235 SITE 1 AC4 6 ARG A 30 GLN A 31 SER A 34 ASP A 154 SITE 2 AC4 6 HOH A 322 HOH A 362 SITE 1 AC5 3 THR A 191 GOL A 220 HOH A 390 SITE 1 AC6 6 TRP A 18 PHE A 175 GLY A 192 TYR A 193 SITE 2 AC6 6 EDO A 219 HOH A 385 CRYST1 48.844 59.642 84.450 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020473 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011841 0.00000