HEADER HYDROLASE 12-OCT-06 2IPB TITLE CRYSTAL STRUCTURE OF T159D MUTANT OF S. TYPHIMURIUM PHON PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASS A NONSPECIFIC ACID PHOSPHATASE PHON; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PHON PROTEIN; COMPND 5 EC: 3.1.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 STRAIN: MD6001 ISOLATE; SOURCE 5 GENE: PHON; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS CLASS-A BACTERIAL NON-SPECIFIC ACID PHOSPHATASE, T159D MUTANT OF THE KEYWDS 2 PHON PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.D.MAKDE,V.KUMAR REVDAT 6 30-OCT-24 2IPB 1 REMARK REVDAT 5 25-OCT-23 2IPB 1 REMARK REVDAT 4 10-NOV-21 2IPB 1 SEQADV REVDAT 3 18-OCT-17 2IPB 1 REMARK REVDAT 2 24-FEB-09 2IPB 1 VERSN REVDAT 1 06-MAR-07 2IPB 0 JRNL AUTH R.D.MAKDE,S.K.MAHAJAN,V.KUMAR JRNL TITL STRUCTURE AND MUTATIONAL ANALYSIS OF THE PHON PROTEIN OF JRNL TITL 2 SALMONELLA TYPHIMURIUM PROVIDE INSIGHT INTO MECHANISTIC JRNL TITL 3 DETAILS JRNL REF BIOCHEMISTRY V. 46 2079 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17263560 JRNL DOI 10.1021/BI062180G REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.D.MAKDE,V.KUMAR,A.S.RAO,V.S.YADAVA,S.K.MAHAJAN REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY REMARK 1 TITL 2 DIFFRACTION STUDIES OF RECOMBINANT CLASS A NON-SPECIFIC ACID REMARK 1 TITL 3 PHOSPHATASE OF SALMONELLA TYPHIMURIUM REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 59 515 2003 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 12595712 REMARK 1 DOI 10.1107/S0907444902022679 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.D.MAKDE,K.DIKSHIT,V.KUMAR REMARK 1 TITL PROTEIN ENGINEERING OF CLASS-A NON-SPECIFIC ACID PHOSPHATASE REMARK 1 TITL 2 (PHON) OF SALMONELLA TYPHIMURIUM: MODULATION OF THE REMARK 1 TITL 3 PH-ACTIVITY PROFILE REMARK 1 REF BIOMOL.ENG. V. 23 247 2006 REMARK 1 REFN ISSN 1389-0344 REMARK 1 PMID 16901752 REMARK 1 DOI 10.1016/J.BIOENG.2006.06.004 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2167 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.23 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2759 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1750 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.2400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7004 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.74000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.63000 REMARK 3 B13 (A**2) : 1.43000 REMARK 3 B23 (A**2) : 0.43000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.271 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.200 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.322 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7208 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9774 ; 0.929 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 872 ; 6.421 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 364 ;33.462 ;23.516 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1174 ;16.062 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;18.830 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 994 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5684 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3118 ; 0.220 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4985 ; 0.319 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 661 ; 0.196 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.212 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.134 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4479 ; 2.029 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7054 ; 3.102 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3107 ; 2.251 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2720 ; 3.448 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IPB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1000039848. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200HB REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43054 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.18200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 2A96 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG-6000, 25MM POTASSIUM CHLORIDE, REMARK 280 5MM MAGNESIUM SULPHATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 95.13650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.55650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 95.13650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.55650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: A DIMER IS THE KNOWN BIOLOGICALLY ACTIVE STATE OF THE PHON REMARK 300 PROTEIN OF SALMONELLA TYPHIMURIUM. THE ENTRY CONTAINS REMARK 300 CRYSTALLOGRAPHIC ASYMMETRIC UNIT CONSISTING OF FOUR CHAINS (TWO REMARK 300 DIMERS). CHAINS A AND B FORM ONE DIMER WHILE CHAINS C AND D FORM REMARK 300 THE OTHER DIMER IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 242 REMARK 465 GLU A 243 REMARK 465 GLU A 244 REMARK 465 ARG A 245 REMARK 465 PRO A 246 REMARK 465 GLU A 247 REMARK 465 LEU A 248 REMARK 465 ASN A 249 REMARK 465 TYR A 250 REMARK 465 ALA B 21 REMARK 465 THR B 22 REMARK 465 LYS B 242 REMARK 465 GLU B 243 REMARK 465 GLU B 244 REMARK 465 ARG B 245 REMARK 465 PRO B 246 REMARK 465 GLU B 247 REMARK 465 LEU B 248 REMARK 465 ASN B 249 REMARK 465 TYR B 250 REMARK 465 ALA C 21 REMARK 465 THR C 22 REMARK 465 LYS C 242 REMARK 465 GLU C 243 REMARK 465 GLU C 244 REMARK 465 ARG C 245 REMARK 465 PRO C 246 REMARK 465 GLU C 247 REMARK 465 LEU C 248 REMARK 465 ASN C 249 REMARK 465 TYR C 250 REMARK 465 ALA D 21 REMARK 465 THR D 22 REMARK 465 LYS D 242 REMARK 465 GLU D 243 REMARK 465 GLU D 244 REMARK 465 ARG D 245 REMARK 465 PRO D 246 REMARK 465 GLU D 247 REMARK 465 LEU D 248 REMARK 465 ASN D 249 REMARK 465 TYR D 250 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 116 -60.34 -107.22 REMARK 500 TYR B 116 -65.46 -107.27 REMARK 500 LEU B 240 146.66 -178.19 REMARK 500 LYS D 64 126.28 -39.27 REMARK 500 TYR D 116 -67.48 -102.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A96 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PHOSPHATE TETHERED PHON OF S. TYPHIMURIUM REMARK 900 RELATED ID: 2AKC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TUNGSTATE COMPLEX OF THE PHON PROTEIN FROM S. REMARK 900 TYPHIMURIUM DBREF 2IPB A 21 250 UNP Q71EB8 Q71EB8_SALTY 21 250 DBREF 2IPB B 21 250 UNP Q71EB8 Q71EB8_SALTY 21 250 DBREF 2IPB C 21 250 UNP Q71EB8 Q71EB8_SALTY 21 250 DBREF 2IPB D 21 250 UNP Q71EB8 Q71EB8_SALTY 21 250 SEQADV 2IPB ASP A 159 UNP Q71EB8 THR 159 ENGINEERED MUTATION SEQADV 2IPB ASP B 159 UNP Q71EB8 THR 159 ENGINEERED MUTATION SEQADV 2IPB ASP C 159 UNP Q71EB8 THR 159 ENGINEERED MUTATION SEQADV 2IPB ASP D 159 UNP Q71EB8 THR 159 ENGINEERED MUTATION SEQRES 1 A 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 A 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 A 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 A 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 A 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 A 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE ASN PRO LYS SEQRES 7 A 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 A 230 LYS MET GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 A 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 A 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 A 230 ASP GLY SER TYR PRO SER GLY HIS ASP ALA TYR SER THR SEQRES 12 A 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 A 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 A 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 A 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 A 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 A 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 A 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 B 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 B 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 B 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 B 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 B 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 B 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE ASN PRO LYS SEQRES 7 B 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 B 230 LYS MET GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 B 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 B 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 B 230 ASP GLY SER TYR PRO SER GLY HIS ASP ALA TYR SER THR SEQRES 12 B 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 B 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 B 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 B 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 B 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 B 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 B 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 C 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 C 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 C 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 C 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 C 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 C 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE ASN PRO LYS SEQRES 7 C 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 C 230 LYS MET GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 C 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 C 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 C 230 ASP GLY SER TYR PRO SER GLY HIS ASP ALA TYR SER THR SEQRES 12 C 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 C 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 C 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 C 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 C 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 C 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 C 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR SEQRES 1 D 230 ALA THR MET GLN PRO PHE HIS SER PRO GLU GLU SER VAL SEQRES 2 D 230 ASN SER GLN PHE TYR LEU PRO PRO PRO PRO GLY ASN ASP SEQRES 3 D 230 ASP PRO ALA PHE ARG TYR ASP LYS GLU ALA TYR PHE LYS SEQRES 4 D 230 GLY TYR ALA ILE LYS GLY SER PRO ARG TRP LYS GLN ALA SEQRES 5 D 230 ALA GLU ASP ALA ASP ILE SER VAL GLU ASN ILE ALA ARG SEQRES 6 D 230 ILE PHE SER PRO VAL VAL GLY ALA LYS ILE ASN PRO LYS SEQRES 7 D 230 ASP THR PRO GLU THR TRP ASN MET LEU GLN ASN LEU LEU SEQRES 8 D 230 LYS MET GLY GLY TYR TYR ALA THR ALA SER ALA LYS LYS SEQRES 9 D 230 TYR TYR MET ARG THR ARG PRO PHE VAL LEU PHE ASN HIS SEQRES 10 D 230 SER THR CYS ARG PRO GLU ASP GLU ASN THR LEU ARG LYS SEQRES 11 D 230 ASP GLY SER TYR PRO SER GLY HIS ASP ALA TYR SER THR SEQRES 12 D 230 LEU LEU ALA LEU VAL LEU SER GLN ALA ARG PRO GLU ARG SEQRES 13 D 230 ALA GLN GLU LEU ALA ARG ARG GLY TRP GLU PHE GLY GLN SEQRES 14 D 230 SER ARG VAL ILE CYS GLY ALA HIS TRP GLN SER ASP VAL SEQRES 15 D 230 ASP ALA GLY ARG TYR VAL GLY ALA VAL GLU PHE ALA ARG SEQRES 16 D 230 LEU GLN THR ILE PRO ALA PHE GLN LYS SER LEU ALA LYS SEQRES 17 D 230 VAL ARG GLU GLU LEU ASN ASP LYS ASN ASN LEU LEU SER SEQRES 18 D 230 LYS GLU GLU ARG PRO GLU LEU ASN TYR FORMUL 5 HOH *293(H2 O) HELIX 1 1 SER A 28 SER A 32 5 5 HELIX 2 2 ASN A 34 LEU A 39 1 6 HELIX 3 3 ASP A 47 ALA A 62 1 16 HELIX 4 4 SER A 66 ASP A 77 1 12 HELIX 5 5 SER A 79 GLY A 92 1 14 HELIX 6 6 THR A 100 TYR A 116 1 17 HELIX 7 7 THR A 119 MET A 127 1 9 HELIX 8 8 ARG A 130 PHE A 135 1 6 HELIX 9 9 ARG A 141 GLU A 143 5 3 HELIX 10 10 ASP A 144 LYS A 150 1 7 HELIX 11 11 SER A 156 ARG A 173 1 18 HELIX 12 12 ARG A 176 GLY A 195 1 20 HELIX 13 13 TRP A 198 GLN A 217 1 20 HELIX 14 14 ILE A 219 ASP A 235 1 17 HELIX 15 15 SER B 28 SER B 32 5 5 HELIX 16 16 ASN B 34 LEU B 39 1 6 HELIX 17 17 ASP B 47 ALA B 62 1 16 HELIX 18 18 SER B 66 ALA B 76 1 11 HELIX 19 19 SER B 79 GLY B 92 1 14 HELIX 20 20 THR B 100 TYR B 116 1 17 HELIX 21 21 THR B 119 MET B 127 1 9 HELIX 22 22 ARG B 130 PHE B 135 1 6 HELIX 23 23 ARG B 141 GLU B 143 5 3 HELIX 24 24 ASP B 144 ASP B 151 1 8 HELIX 25 25 SER B 156 ARG B 173 1 18 HELIX 26 26 ARG B 176 GLY B 195 1 20 HELIX 27 27 TRP B 198 GLN B 217 1 20 HELIX 28 28 ILE B 219 ASN B 234 1 16 HELIX 29 29 SER C 28 SER C 32 5 5 HELIX 30 30 ASN C 34 LEU C 39 1 6 HELIX 31 31 ASP C 47 ALA C 62 1 16 HELIX 32 32 SER C 66 ALA C 76 1 11 HELIX 33 33 SER C 79 GLY C 92 1 14 HELIX 34 34 THR C 100 TYR C 116 1 17 HELIX 35 35 THR C 119 MET C 127 1 9 HELIX 36 36 ARG C 130 PHE C 135 1 6 HELIX 37 37 ARG C 141 GLU C 143 5 3 HELIX 38 38 ASP C 144 ARG C 149 1 6 HELIX 39 39 SER C 156 ARG C 173 1 18 HELIX 40 40 ARG C 176 GLY C 195 1 20 HELIX 41 41 TRP C 198 GLN C 217 1 20 HELIX 42 42 ILE C 219 ASP C 235 1 17 HELIX 43 43 SER D 28 SER D 32 5 5 HELIX 44 44 ASN D 34 LEU D 39 1 6 HELIX 45 45 ASP D 47 ALA D 62 1 16 HELIX 46 46 SER D 66 ALA D 76 1 11 HELIX 47 47 SER D 79 GLY D 92 1 14 HELIX 48 48 THR D 100 TYR D 116 1 17 HELIX 49 49 THR D 119 MET D 127 1 9 HELIX 50 50 ARG D 130 PHE D 135 1 6 HELIX 51 51 ARG D 141 GLU D 143 5 3 HELIX 52 52 ASP D 144 LYS D 150 1 7 HELIX 53 53 SER D 156 ARG D 173 1 18 HELIX 54 54 ARG D 176 GLY D 195 1 20 HELIX 55 55 TRP D 198 GLN D 217 1 20 HELIX 56 56 ILE D 219 ASP D 235 1 17 HELIX 57 57 LYS D 236 LEU D 239 5 4 SSBOND 1 CYS A 140 CYS A 194 1555 1555 2.03 SSBOND 2 CYS B 140 CYS B 194 1555 1555 2.02 SSBOND 3 CYS C 140 CYS C 194 1555 1555 2.04 SSBOND 4 CYS D 140 CYS D 194 1555 1555 2.01 CISPEP 1 TYR A 154 PRO A 155 0 -3.87 CISPEP 2 TYR B 154 PRO B 155 0 -6.99 CISPEP 3 TYR C 154 PRO C 155 0 -8.96 CISPEP 4 TYR D 154 PRO D 155 0 -7.06 CRYST1 190.273 45.113 112.945 90.00 112.05 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005256 0.000000 0.002129 0.00000 SCALE2 0.000000 0.022167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009553 0.00000