HEADER PRION PROTEIN 08-JUN-06 2IV5 TITLE HPRP-173-195 SOLUTION STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR PRION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 173-195; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS PRION PROTEIN, HUMAN PRION PROTEIN, SOLUTION STRUCTURE EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR G.SAVIANO,T.TANCREDI REVDAT 3 15-MAY-24 2IV5 1 REMARK REVDAT 2 24-FEB-09 2IV5 1 VERSN REVDAT 1 28-NOV-06 2IV5 0 JRNL AUTH L.RONGA,P.PALLADINO,B.TIZZANO,S.COSTANTINI,A.FACCHIANO, JRNL AUTH 2 G.SAVIANO,T.TANCREDI,M.RUVO,R.RAGONE,E.BENEDETTI,F.ROSSI JRNL TITL THE CONFORMATIONAL LANDSCAPE OF THE HUMAN PRION PROTEIN JRNL TITL 2 ALPHA 2 DOMAIN: COMPARATIVE NMR AND MD STUDIES ON JRNL TITL 3 HELIX-2-DERIVED PEPTIDES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA REMARK 3 AUTHORS : P.GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2IV5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1290029053. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300.0 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : TRIFLUOROETHANOL-D2 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY; COSY; TOCSY; 15N-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : OTHER REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW REMARK 210 METHOD USED : DYANA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 180 -74.51 -48.18 REMARK 500 1 THR A 190 -55.78 -120.66 REMARK 500 1 LYS A 194 86.65 39.97 REMARK 500 2 VAL A 180 -73.94 -47.81 REMARK 500 2 THR A 190 -61.19 -120.53 REMARK 500 2 LYS A 194 101.59 53.71 REMARK 500 3 VAL A 180 -72.26 -45.93 REMARK 500 3 HIS A 187 -77.11 -38.21 REMARK 500 3 THR A 188 -38.76 -39.88 REMARK 500 3 VAL A 189 45.26 -89.28 REMARK 500 3 THR A 191 35.69 -160.80 REMARK 500 3 LYS A 194 101.64 53.68 REMARK 500 4 VAL A 180 -74.50 -48.38 REMARK 500 4 THR A 190 -52.88 -120.18 REMARK 500 4 THR A 192 -63.23 -90.27 REMARK 500 4 LYS A 194 -79.06 64.34 REMARK 500 5 VAL A 180 -74.05 -47.83 REMARK 500 5 HIS A 187 -81.12 -38.86 REMARK 500 5 THR A 188 -31.16 -38.45 REMARK 500 5 VAL A 189 50.66 -99.08 REMARK 500 5 THR A 190 -90.34 -90.00 REMARK 500 5 LYS A 194 79.11 40.01 REMARK 500 6 VAL A 180 -74.15 -47.73 REMARK 500 6 THR A 190 -58.73 -120.86 REMARK 500 6 LYS A 194 83.48 40.03 REMARK 500 7 VAL A 180 -74.68 -48.22 REMARK 500 7 VAL A 189 44.73 -95.72 REMARK 500 7 THR A 191 34.20 -160.76 REMARK 500 7 LYS A 194 -166.33 44.13 REMARK 500 8 VAL A 180 -73.93 -47.62 REMARK 500 8 LYS A 194 89.64 40.24 REMARK 500 9 VAL A 180 -74.57 -48.44 REMARK 500 9 LYS A 194 89.10 40.06 REMARK 500 10 VAL A 180 -73.60 -47.19 REMARK 500 10 HIS A 187 -81.25 -36.65 REMARK 500 10 THR A 188 -31.95 -39.90 REMARK 500 10 VAL A 189 47.86 -96.56 REMARK 500 10 THR A 190 -97.92 -62.39 REMARK 500 10 LYS A 194 101.70 53.60 REMARK 500 11 VAL A 180 -73.93 -47.54 REMARK 500 11 THR A 190 -64.21 -121.56 REMARK 500 11 LYS A 194 101.69 53.73 REMARK 500 12 VAL A 180 -74.52 -48.48 REMARK 500 12 LYS A 194 74.53 40.14 REMARK 500 13 VAL A 180 -74.33 -48.15 REMARK 500 13 HIS A 187 -77.49 -37.68 REMARK 500 13 VAL A 189 42.03 -92.23 REMARK 500 13 THR A 190 -77.56 -45.20 REMARK 500 13 LYS A 194 101.65 53.61 REMARK 500 14 VAL A 180 -73.84 -47.86 REMARK 500 REMARK 500 THIS ENTRY HAS 122 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1X4Q RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PWI DOMAIN IN U4/U6 SMALL REMARK 900 NUCLEARRIBONUCLEOPROTEIN PRP3(HPRP3) REMARK 900 RELATED ID: 2IV4 RELATED DB: PDB REMARK 900 HPRP180-195 STRUCTURE REMARK 900 RELATED ID: 2IV6 RELATED DB: PDB REMARK 900 HPRP-173-195-D178N SOLUTION STRUCTURE DBREF 2IV5 A 173 195 UNP Q5QPB4 Q5QPB4_HUMAN 173 195 SEQRES 1 A 23 ASN ASN PHE VAL HIS ASP CYS VAL ASN ILE THR ILE LYS SEQRES 2 A 23 GLN HIS THR VAL THR THR THR THR LYS GLY HELIX 1 1 ASN A 173 THR A 192 1 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1