HEADER TRANSFERASE 27-JUL-06 2IZY TITLE MOLECULAR BASIS OF AKAP SPECIFICITY FOR PKA REGULATORY TITLE 2 SUBUNITS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT COMPND 3 II; COMPND 4 CHAIN: A, B, C, D, E, F, G, H; COMPND 5 FRAGMENT: RESIDUES 2-44; COMPND 6 EC: 2.7.11.11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20 KEYWDS D/D, RII, PKA, CAMP, KINASE, ACETYLATION, TRANSFERASE, KEYWDS 2 CAMP- BINDING, PHOSPHORYLATION, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.G.GOLD,B.LYGREN,P.DOKURNO,N.HOSHI,G.MCCONNACHIE,K.TASKEN, AUTHOR 2 C.R.CARLSON,J.D.SCOTT,D.BARFORD REVDAT 3 24-FEB-09 2IZY 1 VERSN REVDAT 2 20-DEC-06 2IZY 1 JRNL REVDAT 1 13-NOV-06 2IZY 0 JRNL AUTH M.G.GOLD,B.LYGREN,P.DOKURNO,N.HOSHI,G.MCCONNACHIE, JRNL AUTH 2 K.TASKEN,C.R.CARLSON,J.D.SCOTT,D.BARFORD JRNL TITL MOLECULAR BASIS OF AKAP SPECIFICITY FOR PKA JRNL TITL 2 REGULULATORY SUBUNITS JRNL REF MOL.CELL V. 24 383 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 17081989 JRNL DOI 10.1016/J.MOLCEL.2006.09.006 REMARK 2 REMARK 2 RESOLUTION. 2.2 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1970 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1267 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 112 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3010 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.306 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.517 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3074 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4186 ; 1.253 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 366 ; 4.660 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;31.864 ;22.875 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 491 ;16.172 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;13.612 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 473 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2401 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1445 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2113 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 194 ; 0.197 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.158 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.228 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1942 ; 0.727 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3026 ; 1.224 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1267 ; 1.803 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1160 ; 2.942 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. RESIDUES VISIBLE C-TERMINAL TO POSITION 46 REMARK 3 ARE PART OF AN UNCLEAVED 6HIS TAG REMARK 4 REMARK 4 2IZY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-06. REMARK 100 THE PDBE ID CODE IS EBI-29514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.80 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23415 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.6 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-10% PEG400, 0.2-0.4 M SODIUM REMARK 280 PHOSPHATE AND SODIUM CITRATE (PH 5.8) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 126.03133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.01567 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.52350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.50783 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 157.53917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 126.03133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 63.01567 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.50783 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 94.52350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 157.53917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, F, E, H, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 HOH B2022 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 GLY A 3 REMARK 465 HIS A 4 REMARK 465 ILE A 5 REMARK 465 HIS A 53 REMARK 465 HIS A 54 REMARK 465 HIS A 55 REMARK 465 MET B 2 REMARK 465 GLY B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 51 REMARK 465 HIS B 52 REMARK 465 HIS B 53 REMARK 465 HIS B 54 REMARK 465 HIS B 55 REMARK 465 MET C 2 REMARK 465 GLY C 3 REMARK 465 HIS C 4 REMARK 465 ILE C 5 REMARK 465 HIS C 52 REMARK 465 HIS C 53 REMARK 465 HIS C 54 REMARK 465 HIS C 55 REMARK 465 MET D 2 REMARK 465 GLY D 3 REMARK 465 HIS D 4 REMARK 465 HIS D 53 REMARK 465 HIS D 54 REMARK 465 HIS D 55 REMARK 465 MET E 2 REMARK 465 GLY E 3 REMARK 465 HIS E 4 REMARK 465 HIS E 53 REMARK 465 HIS E 54 REMARK 465 HIS E 55 REMARK 465 MET F 2 REMARK 465 GLY F 3 REMARK 465 HIS F 4 REMARK 465 HIS F 53 REMARK 465 HIS F 54 REMARK 465 HIS F 55 REMARK 465 MET G 2 REMARK 465 GLY G 3 REMARK 465 HIS G 4 REMARK 465 ILE G 5 REMARK 465 HIS G 51 REMARK 465 HIS G 52 REMARK 465 HIS G 53 REMARK 465 HIS G 54 REMARK 465 HIS G 55 REMARK 465 MET H 2 REMARK 465 GLY H 3 REMARK 465 HIS H 4 REMARK 465 HIS H 52 REMARK 465 HIS H 53 REMARK 465 HIS H 54 REMARK 465 HIS H 55 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 6 CG CD OE1 NE2 REMARK 470 ARG A 46 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 52 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 5 CG1 CG2 CD1 REMARK 470 GLN B 6 CG CD OE1 NE2 REMARK 470 HIS B 50 CG ND1 CD2 CE1 NE2 REMARK 470 GLN C 6 CG CD OE1 NE2 REMARK 470 ARG C 46 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 50 CG ND1 CD2 CE1 NE2 REMARK 470 HIS C 51 CG ND1 CD2 CE1 NE2 REMARK 470 GLU D 49 CG CD OE1 OE2 REMARK 470 HIS D 52 CA C O CB CG ND1 CD2 CE1 NE2 REMARK 470 ARG E 46 CG CD NE CZ NH1 NH2 REMARK 470 HIS E 50 CG ND1 CD2 CE1 NE2 REMARK 470 HIS E 52 CG ND1 CD2 CE1 NE2 REMARK 470 ILE F 5 CG1 CG2 CD1 REMARK 470 GLN F 6 CG CD OE1 NE2 REMARK 470 HIS F 50 CG ND1 CD2 CE1 NE2 REMARK 470 HIS F 52 CG ND1 CD2 CE1 NE2 REMARK 470 HIS G 50 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG F 40 - O HOH F 2025 2.20 REMARK 500 O HOH D 2009 - O HOH A 2012 2.08 REMARK 500 O HOH E 2025 - O HOH F 2031 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 REMARK 500 O HOH G 2007 O HOH H 2013 5565 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN D 6 96.72 66.52 REMARK 500 GLN F 6 77.18 87.78 REMARK 500 GLN F 26 62.53 39.06 REMARK 500 HIS H 50 43.69 -100.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): DBREF 2IZY A 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY A 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY A 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY B 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY B 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY B 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY C 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY C 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY C 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY D 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY D 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY D 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY E 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY E 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY E 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY F 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY F 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY F 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY G 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY G 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY G 47 55 PDB 2IZY 2IZY 47 55 DBREF 2IZY H 2 3 PDB 2IZY 2IZY 2 3 DBREF 2IZY H 4 46 UNP P12368 KAP2_RAT 2 44 DBREF 2IZY H 47 55 PDB 2IZY 2IZY 47 55 SEQRES 1 A 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 A 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 A 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 A 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 A 54 HIS HIS SEQRES 1 B 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 B 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 B 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 B 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 B 54 HIS HIS SEQRES 1 C 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 C 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 C 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 C 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 C 54 HIS HIS SEQRES 1 D 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 D 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 D 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 D 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 D 54 HIS HIS SEQRES 1 E 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 E 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 E 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 E 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 E 54 HIS HIS SEQRES 1 F 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 F 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 F 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 F 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 F 54 HIS HIS SEQRES 1 G 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 G 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 G 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 G 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 G 54 HIS HIS SEQRES 1 H 54 MET GLY HIS ILE GLN ILE PRO PRO GLY LEU THR GLU LEU SEQRES 2 H 54 LEU GLN GLY TYR THR VAL GLU VAL LEU ARG GLN GLN PRO SEQRES 3 H 54 PRO ASP LEU VAL ASP PHE ALA VAL GLU TYR PHE THR ARG SEQRES 4 H 54 LEU ARG GLU ALA ARG ARG GLY LEU GLU HIS HIS HIS HIS SEQRES 5 H 54 HIS HIS FORMUL 9 HOH *270(H2 O1) HELIX 1 1 GLY A 10 GLN A 26 1 17 HELIX 2 2 ASP A 29 HIS A 52 1 24 HELIX 3 3 GLY B 10 GLN B 26 1 17 HELIX 4 4 ASP B 29 HIS B 50 1 22 HELIX 5 5 GLY C 10 GLN C 26 1 17 HELIX 6 6 ASP C 29 HIS C 51 1 23 HELIX 7 7 GLY D 10 GLN D 26 1 17 HELIX 8 8 ASP D 29 HIS D 51 1 23 HELIX 9 9 GLY E 10 GLN E 26 1 17 HELIX 10 10 ASP E 29 HIS E 51 1 23 HELIX 11 11 GLY F 10 GLN F 26 1 17 HELIX 12 12 ASP F 29 HIS F 52 1 24 HELIX 13 13 GLY G 10 GLN G 26 1 17 HELIX 14 14 ASP G 29 HIS G 50 1 22 HELIX 15 15 GLY H 10 GLN H 26 1 17 HELIX 16 16 ASP H 29 HIS H 50 1 22 CRYST1 91.490 91.490 189.047 90.00 90.00 120.00 P 65 2 2 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010930 0.006311 0.000000 0.00000 SCALE2 0.000000 0.012621 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005290 0.00000