HEADER HYDROLASE 02-AUG-06 2J0E TITLE THREE DIMENSIONAL STRUCTURE AND CATALYTIC MECHANISM OF 6- TITLE 2 PHOSPHOGLUCONOLACTONASE FROM TRYPANOSOMA BRUCEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-PHOSPHOGLUCONOLACTONASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.31; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: ONE BOUND ZINC ATOM PER MONOMER. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS CATALYTIC MECHANISM, PENTOSE PHOSPHATE PATHWAY, 6- KEYWDS 2 PHOSPHOGLUCONOLACTONASE, TRYPANOSOMA BRUCEI, HYDROLASE, KEYWDS 3 ZINC BINDING SITE EXPDTA X-RAY DIFFRACTION AUTHOR M.DELARUE,N.DUCLERT-SAVATIER,E.MICLET,A.HAOUZ,D.GIGANTI, AUTHOR 2 J.OUAZZANI,P.LOPEZ,M.NILGES,V.STOVEN REVDAT 3 24-FEB-09 2J0E 1 VERSN REVDAT 2 13-FEB-07 2J0E 1 JRNL REVDAT 1 03-JAN-07 2J0E 0 JRNL AUTH M.DELARUE,N.DUCLERT-SAVATIER,E.MICLET,A.HAOUZ, JRNL AUTH 2 D.GIGANTI,J.OUAZZANI,P.LOPEZ,M.NILGES,V.STOVEN JRNL TITL THREE DIMENSIONAL STRUCTURE AND IMPLICATIONS FOR JRNL TITL 2 THE CATALYTIC MECHANISM OF 6- JRNL TITL 3 PHOSPHOGLUCONOLACTONASE FROM TRYPANOSOMA BRUCEI. JRNL REF J.MOL.BIOL. V. 366 868 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17196981 JRNL DOI 10.1016/J.JMB.2006.11.063 REMARK 2 REMARK 2 RESOLUTION. 2.1 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.00 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 30438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 1539 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.1 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.1 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4603 REMARK 3 BIN R VALUE (WORKING SET) : 0.225 REMARK 3 BIN FREE R VALUE : 0.282 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 240 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3942 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 461 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.997 REMARK 3 B22 (A**2) : 2.535 REMARK 3 B33 (A**2) : -1.538 REMARK 3 B12 (A**2) : 0.000 REMARK 3 B13 (A**2) : 0.000 REMARK 3 B23 (A**2) : 0.000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.3 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.0 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.85 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.37 ; 1.50 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.16 ; 2.0 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.19 ; 2.0 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.18 ; 2.5 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.334866 REMARK 3 BSOL : 65.7024 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS REFINED ON THE REMARK 3 CRYSTAL SOAKED WITH A MERCURY DERIVATIVE (2 HG ATOMS PER REMARK 3 MONOMER) REMARK 4 REMARK 4 2J0E COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-AUG-06. REMARK 100 THE PDBE ID CODE IS EBI-29556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008014 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.840 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ANOTHER DATASET WITH SELENOMETHIONYLATED PROTEIN WAS REMARK 200 COLLECTED AT 2.8 ANGSTROM AND WAS USED TO CHECK THE POSITION REMARK 200 OF METHIONINES. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG MME, 50MM NA ACETATE, REMARK 280 HEPES PH 7.5 100 MM. PROTEIN 10MG/ML REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.15500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.15500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.15500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.15500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 265 REMARK 465 PHE A 266 REMARK 465 MET B 1 REMARK 465 LYS B 265 REMARK 465 PHE B 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 LYS B 257 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 4 77.83 -118.33 REMARK 500 LEU A 95 -53.05 -149.54 REMARK 500 ALA A 167 -132.45 47.68 REMARK 500 LEU B 95 -56.66 -148.41 REMARK 500 ALA B 116 138.06 -174.05 REMARK 500 ALA B 167 -136.28 48.30 REMARK 500 SER B 186 -165.61 -121.54 REMARK 500 HIS B 236 112.74 -171.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1265 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 HOH A2219 O 75.4 REMARK 620 3 HOH A2221 O 175.2 102.2 REMARK 620 4 HIS A 97 NE2 91.3 166.6 90.9 REMARK 620 5 HOH A2220 O 89.1 83.8 86.5 94.4 REMARK 620 6 HIS A 56 NE2 90.9 87.5 93.2 94.6 171.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1265 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 97 NE2 REMARK 620 2 ASP B 98 OD1 90.8 REMARK 620 3 HOH B2239 O 95.1 87.2 REMARK 620 4 HOH B2240 O 96.7 168.1 83.0 REMARK 620 5 HIS B 56 NE2 97.9 77.7 160.1 110.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1267 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 247 SG REMARK 620 2 LEU A 244 O 75.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1268 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 59 NE2 REMARK 620 2 HOH A2057 O 89.8 REMARK 620 3 HOH A2054 O 51.8 100.1 REMARK 620 4 CYS A 21 SG 82.5 161.0 88.7 REMARK 620 5 ARG A 22 N 153.6 94.4 151.3 85.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B1267 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 244 O REMARK 620 2 CYS B 247 SG 70.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B1268 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2022 O REMARK 620 2 HOH B2060 O 85.5 REMARK 620 3 CYS B 21 SG 159.8 99.8 REMARK 620 4 HIS B 59 NE2 80.5 54.7 86.7 REMARK 620 5 ARG B 22 N 100.2 149.3 85.3 155.9 REMARK 620 6 HOH B2019 O 92.8 72.0 107.4 126.6 77.5 REMARK 620 7 CYS B 21 O 102.6 168.5 69.8 117.9 38.1 115.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B1266 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 249 O REMARK 620 2 HOH B2232 O 102.4 REMARK 620 3 CYS B 247 O 98.8 55.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A1268 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B1266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B1268 DBREF 2J0E A 1 266 UNP Q9GRG6 Q9GRG6_9TRYP 1 266 DBREF 2J0E B 1 266 UNP Q9GRG6 Q9GRG6_9TRYP 1 266 SEQRES 1 A 266 MET SER PHE LYS PRO THR ILE SER VAL HIS ALA THR PRO SEQRES 2 A 266 GLN GLU LEU SER ALA ALA GLY CYS ARG LYS ILE VAL GLU SEQRES 3 A 266 ILE ILE GLU ALA SER GLY SER GLN GLN TRP PRO LEU SER SEQRES 4 A 266 ILE ALA LEU ALA GLY GLY SER THR PRO LYS MET THR TYR SEQRES 5 A 266 ALA ARG LEU HIS ASP GLU HIS LEU ASN LEU LEU ARG GLU SEQRES 6 A 266 LYS ARG ALA LEU ARG PHE PHE MET GLY ASP GLU ARG MET SEQRES 7 A 266 VAL PRO ALA ASP SER THR ASP SER ASN TYR ASN MET ALA SEQRES 8 A 266 ARG GLU VAL LEU LEU HIS ASP ILE PRO ASP ASP LEU VAL SEQRES 9 A 266 PHE PRO PHE ASP THR SER ALA VAL THR PRO SER ALA GLU SEQRES 10 A 266 ALA THR SER ALA ASP ALA MET ARG VAL ALA GLU ALA TYR SEQRES 11 A 266 GLY LYS GLN LEU ALA SER LEU LEU PRO LEU LYS SER VAL SEQRES 12 A 266 GLY GLU ALA GLY PRO LYS VAL PRO VAL PHE ASP VAL VAL SEQRES 13 A 266 LEU LEU GLY LEU GLY SER ASP GLY HIS THR ALA SER ILE SEQRES 14 A 266 PHE PRO GLY SER GLN ALA GLU LYS GLU THR ASP GLY LYS SEQRES 15 A 266 VAL VAL VAL SER VAL GLY PHE PRO SER GLU THR MET LYS SEQRES 16 A 266 PRO LYS VAL TRP ARG VAL THR LEU SER PRO ALA THR ILE SEQRES 17 A 266 MET GLN ALA ARG ASN VAL ILE VAL LEU ALA THR GLY ALA SEQRES 18 A 266 GLU LYS LYS TRP VAL VAL ASP GLY ILE LEU ALA ASP THR SEQRES 19 A 266 ALA HIS LYS ALA PRO VAL ALA ARG PHE LEU ARG GLY CYS SEQRES 20 A 266 GLU GLY ASN VAL SER PHE LEU LEU ASP LYS GLU ILE ALA SEQRES 21 A 266 GLU ASN LEU ALA LYS PHE SEQRES 1 B 266 MET SER PHE LYS PRO THR ILE SER VAL HIS ALA THR PRO SEQRES 2 B 266 GLN GLU LEU SER ALA ALA GLY CYS ARG LYS ILE VAL GLU SEQRES 3 B 266 ILE ILE GLU ALA SER GLY SER GLN GLN TRP PRO LEU SER SEQRES 4 B 266 ILE ALA LEU ALA GLY GLY SER THR PRO LYS MET THR TYR SEQRES 5 B 266 ALA ARG LEU HIS ASP GLU HIS LEU ASN LEU LEU ARG GLU SEQRES 6 B 266 LYS ARG ALA LEU ARG PHE PHE MET GLY ASP GLU ARG MET SEQRES 7 B 266 VAL PRO ALA ASP SER THR ASP SER ASN TYR ASN MET ALA SEQRES 8 B 266 ARG GLU VAL LEU LEU HIS ASP ILE PRO ASP ASP LEU VAL SEQRES 9 B 266 PHE PRO PHE ASP THR SER ALA VAL THR PRO SER ALA GLU SEQRES 10 B 266 ALA THR SER ALA ASP ALA MET ARG VAL ALA GLU ALA TYR SEQRES 11 B 266 GLY LYS GLN LEU ALA SER LEU LEU PRO LEU LYS SER VAL SEQRES 12 B 266 GLY GLU ALA GLY PRO LYS VAL PRO VAL PHE ASP VAL VAL SEQRES 13 B 266 LEU LEU GLY LEU GLY SER ASP GLY HIS THR ALA SER ILE SEQRES 14 B 266 PHE PRO GLY SER GLN ALA GLU LYS GLU THR ASP GLY LYS SEQRES 15 B 266 VAL VAL VAL SER VAL GLY PHE PRO SER GLU THR MET LYS SEQRES 16 B 266 PRO LYS VAL TRP ARG VAL THR LEU SER PRO ALA THR ILE SEQRES 17 B 266 MET GLN ALA ARG ASN VAL ILE VAL LEU ALA THR GLY ALA SEQRES 18 B 266 GLU LYS LYS TRP VAL VAL ASP GLY ILE LEU ALA ASP THR SEQRES 19 B 266 ALA HIS LYS ALA PRO VAL ALA ARG PHE LEU ARG GLY CYS SEQRES 20 B 266 GLU GLY ASN VAL SER PHE LEU LEU ASP LYS GLU ILE ALA SEQRES 21 B 266 GLU ASN LEU ALA LYS PHE HET ZN A1265 1 HET HG A1267 1 HET HG A1268 1 HET ZN B1265 1 HET K B1266 1 HET HG B1267 1 HET HG B1268 1 HETNAM ZN ZINC ION HETNAM HG MERCURY (II) ION HETNAM K POTASSIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 HG 4(HG 2+) FORMUL 7 K K 1+ FORMUL 10 HOH *461(H2 O1) HELIX 1 1 THR A 12 GLY A 32 1 21 HELIX 2 2 SER A 33 TRP A 36 5 4 HELIX 3 3 GLY A 45 HIS A 59 1 15 HELIX 4 4 HIS A 59 ARG A 64 1 6 HELIX 5 5 SER A 86 LEU A 95 1 10 HELIX 6 6 LEU A 96 ILE A 99 5 4 HELIX 7 7 PRO A 100 ASP A 102 5 3 HELIX 8 8 THR A 119 LEU A 138 1 20 HELIX 9 9 SER A 173 GLU A 178 1 6 HELIX 10 10 SER A 204 MET A 209 1 6 HELIX 11 11 GLY A 220 GLU A 222 5 3 HELIX 12 12 LYS A 223 ALA A 232 1 10 HELIX 13 13 PRO A 239 CYS A 247 5 9 HELIX 14 14 THR B 12 SER B 31 1 20 HELIX 15 15 GLY B 32 TRP B 36 5 5 HELIX 16 16 GLY B 45 HIS B 59 1 15 HELIX 17 17 HIS B 59 ARG B 64 1 6 HELIX 18 18 SER B 86 LEU B 95 1 10 HELIX 19 19 LEU B 96 ILE B 99 5 4 HELIX 20 20 PRO B 100 ASP B 102 5 3 HELIX 21 21 THR B 119 LEU B 138 1 20 HELIX 22 22 GLN B 174 GLU B 178 5 5 HELIX 23 23 SER B 204 MET B 209 1 6 HELIX 24 24 GLY B 220 GLU B 222 5 3 HELIX 25 25 LYS B 223 ALA B 232 1 10 HELIX 26 26 PRO B 239 CYS B 247 5 9 SHEET 1 AA 7 THR A 6 HIS A 10 0 SHEET 2 AA 7 ASN A 250 ASP A 256 1 O VAL A 251 N THR A 6 SHEET 3 AA 7 ASN A 213 ALA A 218 1 O VAL A 214 N SER A 252 SHEET 4 AA 7 VAL A 155 LEU A 158 1 O VAL A 156 N ILE A 215 SHEET 5 AA 7 LEU A 38 LEU A 42 1 O SER A 39 N VAL A 155 SHEET 6 AA 7 LEU A 69 MET A 73 1 O ARG A 70 N ILE A 40 SHEET 7 AA 7 VAL A 104 PHE A 105 1 O PHE A 105 N MET A 73 SHEET 1 AB 3 ASP A 75 ARG A 77 0 SHEET 2 AB 3 ARG A 200 LEU A 203 -1 O VAL A 201 N GLU A 76 SHEET 3 AB 3 VAL A 185 GLY A 188 -1 O SER A 186 N THR A 202 SHEET 1 AC 2 LEU A 140 SER A 142 0 SHEET 2 AC 2 LYS A 149 PRO A 151 -1 O VAL A 150 N LYS A 141 SHEET 1 BA 7 THR B 6 HIS B 10 0 SHEET 2 BA 7 ASN B 250 ASP B 256 1 O VAL B 251 N THR B 6 SHEET 3 BA 7 ASN B 213 ALA B 218 1 O VAL B 214 N SER B 252 SHEET 4 BA 7 VAL B 155 LEU B 158 1 O VAL B 156 N ILE B 215 SHEET 5 BA 7 LEU B 38 LEU B 42 1 O SER B 39 N VAL B 155 SHEET 6 BA 7 LEU B 69 MET B 73 1 O ARG B 70 N ILE B 40 SHEET 7 BA 7 VAL B 104 PHE B 105 1 O PHE B 105 N MET B 73 SHEET 1 BB 3 ASP B 75 ARG B 77 0 SHEET 2 BB 3 ARG B 200 LEU B 203 -1 O VAL B 201 N GLU B 76 SHEET 3 BB 3 VAL B 185 GLY B 188 -1 O SER B 186 N THR B 202 SHEET 1 BC 2 LEU B 140 SER B 142 0 SHEET 2 BC 2 LYS B 149 PRO B 151 -1 O VAL B 150 N LYS B 141 LINK ZN ZN A1265 OD1 ASP A 98 1555 1555 2.06 LINK ZN ZN A1265 O HOH A2219 1555 1555 2.51 LINK ZN ZN A1265 O HOH A2221 1555 1555 2.21 LINK ZN ZN A1265 NE2 HIS A 97 1555 1555 2.34 LINK ZN ZN A1265 O HOH A2220 1555 1555 2.32 LINK ZN ZN A1265 NE2 HIS A 56 1555 1555 2.06 LINK HG HG A1267 SG CYS A 247 1555 1555 2.66 LINK HG HG A1267 O LEU A 244 1555 1555 3.12 LINK HG HG A1268 NE2 HIS A 59 1555 1555 2.78 LINK HG HG A1268 O HOH A2057 1555 1555 2.75 LINK HG HG A1268 O HOH A2054 1555 1555 3.41 LINK HG HG A1268 SG CYS A 21 1555 1555 2.72 LINK HG HG A1268 N ARG A 22 1555 1555 3.29 LINK ZN ZN B1265 O HOH B2239 1555 1555 2.25 LINK ZN ZN B1265 O HOH B2240 1555 1555 2.62 LINK ZN ZN B1265 NE2 HIS B 56 1555 1555 2.07 LINK ZN ZN B1265 NE2 HIS B 97 1555 1555 2.11 LINK ZN ZN B1265 OD1 ASP B 98 1555 1555 1.93 LINK K K B1266 O HOH B2232 1555 1555 2.82 LINK K K B1266 O CYS B 247 1555 1555 2.66 LINK K K B1266 O GLY B 249 1555 1555 3.03 LINK HG HG B1267 SG CYS B 247 1555 1555 2.68 LINK HG HG B1267 O LEU B 244 1555 1555 3.33 LINK HG HG B1268 N ARG B 22 1555 1555 3.40 LINK HG HG B1268 O HOH B2019 1555 1555 3.13 LINK HG HG B1268 O CYS B 21 1555 1555 3.48 LINK HG HG B1268 NE2 HIS B 59 1555 1555 2.74 LINK HG HG B1268 SG CYS B 21 1555 1555 2.58 LINK HG HG B1268 O HOH B2060 1555 1555 3.18 LINK HG HG B1268 O HOH B2022 1555 1555 2.95 CISPEP 1 TRP A 36 PRO A 37 0 0.20 CISPEP 2 LYS A 195 PRO A 196 0 -0.31 CISPEP 3 TRP B 36 PRO B 37 0 0.20 CISPEP 4 LYS B 195 PRO B 196 0 0.57 SITE 1 AC1 6 HIS A 56 HIS A 97 ASP A 98 HOH A2219 SITE 2 AC1 6 HOH A2220 HOH A2221 SITE 1 AC2 4 VAL A 214 LEU A 244 CYS A 247 VAL A 251 SITE 1 AC3 4 CYS A 21 ARG A 22 HIS A 59 HOH A2057 SITE 1 AC4 6 HIS B 56 HIS B 97 ASP B 98 HOH B2238 SITE 2 AC4 6 HOH B2239 HOH B2240 SITE 1 AC5 4 CYS B 247 GLU B 248 GLY B 249 HOH B2232 SITE 1 AC6 4 VAL B 214 LEU B 244 CYS B 247 VAL B 251 SITE 1 AC7 4 CYS B 21 ARG B 22 HIS B 59 HOH B2022 CRYST1 70.310 80.850 90.310 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012369 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011073 0.00000 MTRIX1 1 0.999400 -0.007900 -0.034700 -0.39370 1 MTRIX2 1 0.010800 0.996400 0.084200 14.35180 1 MTRIX3 1 0.033900 -0.084500 0.995800 -46.09850 1