HEADER LIGASE 22-AUG-06 2J3M TITLE PROLYL-TRNA SYNTHETASE FROM ENTEROCOCCUS FAECALIS COMPLEXED WITH ATP, TITLE 2 MANGANESE AND PROLINOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 6.1.1.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PQE-60 KEYWDS BACTERIAL-TYPE PROLYL-TRNA SYNTHETASE, CLASS II AMINOACYL-TRNA KEYWDS 2 SYNTHETASE, EDITING, TRANSLATION, ATP + L-PROLINE + TRNA (PRO) GIVES KEYWDS 3 AMP + PPI + L-PROLYL-TRNA(PRO), LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR T.CREPIN,A.YAREMCHUK,M.TUKALO,S.CUSACK REVDAT 3 13-DEC-23 2J3M 1 REMARK LINK REVDAT 2 24-FEB-09 2J3M 1 VERSN REVDAT 1 11-OCT-06 2J3M 0 JRNL AUTH T.CREPIN,A.YAREMCHUK,M.TUKALO,S.CUSACK JRNL TITL STRUCTURES OF TWO BACTERIAL PROLYL-TRNA SYNTHETASES WITH AND JRNL TITL 2 WITHOUT A CIS-EDITING DOMAIN. JRNL REF STRUCTURE V. 14 1511 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 17027500 JRNL DOI 10.1016/J.STR.2006.08.007 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 52213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1894 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3822 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8791 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 363 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.47000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.355 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.181 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.240 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9028 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12193 ; 1.694 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1109 ; 7.073 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 439 ;34.853 ;24.465 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1626 ;16.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 68 ;19.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1347 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6803 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 5602 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6238 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 820 ; 0.190 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 101 ; 0.241 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.341 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5639 ; 0.828 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8895 ; 1.359 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3757 ; 2.330 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3298 ; 3.679 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2J3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1290029795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0723 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2J3L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 1M LICL, 100MM MES, PH REMARK 280 6.5, 5MM PROLINOL, 2MM ATP, 6MM MGCL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.33950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 12 REMARK 465 GLU A 13 REMARK 465 VAL A 14 REMARK 465 PRO A 15 REMARK 465 ASN A 16 REMARK 465 ASP A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 201 REMARK 465 MET A 202 REMARK 465 GLY A 203 REMARK 465 GLY A 204 REMARK 465 ASN A 566 REMARK 465 THR A 567 REMARK 465 THR A 568 REMARK 465 SER A 569 REMARK 465 GLU A 570 REMARK 465 VAL A 571 REMARK 465 GLU A 572 REMARK 465 ARG B 12 REMARK 465 GLU B 13 REMARK 465 VAL B 14 REMARK 465 PRO B 15 REMARK 465 ASN B 16 REMARK 465 ASP B 17 REMARK 465 ALA B 18 REMARK 465 ASN B 566 REMARK 465 THR B 567 REMARK 465 THR B 568 REMARK 465 SER B 569 REMARK 465 GLU B 570 REMARK 465 VAL B 571 REMARK 465 GLU B 572 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2010 O HOH B 2011 2.09 REMARK 500 OE1 GLU B 78 NH2 ARG B 102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 432 O GLY B 200 1655 1.91 REMARK 500 NH1 ARG A 102 OE2 GLU A 273 2655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 99 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 109 164.52 179.47 REMARK 500 ASP A 373 -36.80 75.88 REMARK 500 ASN A 509 69.99 -69.49 REMARK 500 VAL B 20 136.88 -29.72 REMARK 500 ASP B 141 64.79 -69.14 REMARK 500 ARG B 144 138.85 -39.40 REMARK 500 PRO B 242 93.25 -44.88 REMARK 500 LYS B 243 65.36 -103.14 REMARK 500 THR B 262 160.15 -44.56 REMARK 500 ASN B 337 72.67 35.51 REMARK 500 SER B 339 142.45 -37.57 REMARK 500 ASP B 373 -60.55 74.76 REMARK 500 SER B 380 155.72 175.28 REMARK 500 ASP B 383 98.61 -68.45 REMARK 500 ASP B 395 33.51 -90.76 REMARK 500 LYS B 532 -36.12 -38.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1567 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 407 OE2 REMARK 620 2 HIS A 410 ND1 88.1 REMARK 620 3 ATP A 701 O2B 96.8 161.9 REMARK 620 4 ATP A 701 O1A 91.9 105.0 92.3 REMARK 620 5 HOH A2200 O 174.4 93.8 79.9 92.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1568 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 407 OE1 REMARK 620 2 ATP A 701 O1G 99.2 REMARK 620 3 ATP A 701 O2B 86.1 95.4 REMARK 620 4 HOH A2201 O 174.0 80.0 99.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1570 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 701 O1B REMARK 620 2 ATP A 701 O2G 91.4 REMARK 620 3 HOH B2161 O 93.4 91.8 REMARK 620 4 HOH B2162 O 81.2 93.0 172.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1567 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 407 OE2 REMARK 620 2 HIS B 410 ND1 96.8 REMARK 620 3 ATP B 701 O2B 90.6 164.1 REMARK 620 4 ATP B 701 O1A 101.1 100.6 91.7 REMARK 620 5 HOH B2157 O 171.0 88.8 82.3 84.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1568 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 407 OE1 REMARK 620 2 ATP B 701 O1G 93.2 REMARK 620 3 ATP B 701 O2B 89.0 92.7 REMARK 620 4 HOH B2158 O 173.5 92.5 87.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1569 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 701 O1B REMARK 620 2 ATP B 701 O2G 90.0 REMARK 620 3 HOH B2159 O 97.1 89.0 REMARK 620 4 HOH B2160 O 77.0 85.2 171.7 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AB" REMARK 700 AND "BB" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 9- REMARK 700 STRANDED BARREL THIS IS REPRESENTED BY A 10-STRANDED SHEET IN REMARK 700 WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1567 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1568 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B1567 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B1568 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B1569 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B1570 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PRI A1566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PRI B1566 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2J3L RELATED DB: PDB REMARK 900 PROLYL-TRNA SYNTHETASE FROM ENTEROCOCCUS FAECALIS COMPLEXED WITH A REMARK 900 PROLYL-ADENYLATE ANALOGUE ('5'-O-(N-(L-PROLYL)-SULFAMOYL) ADENOSINE) DBREF 2J3M A 1 572 UNP Q831W7 Q831W7_ENTFA 1 572 DBREF 2J3M B 1 572 UNP Q831W7 Q831W7_ENTFA 1 572 SEQRES 1 A 572 MET LYS GLN SER LYS MET LEU ILE PRO THR LEU ARG GLU SEQRES 2 A 572 VAL PRO ASN ASP ALA GLU VAL LEU SER HIS GLN ILE LEU SEQRES 3 A 572 LEU ARG ALA GLY TYR ILE ARG GLN VAL ALA ALA GLY ILE SEQRES 4 A 572 TYR SER TYR LEU PRO LEU ALA ASN ARG VAL LEU GLU LYS SEQRES 5 A 572 LEU LYS THR ILE MET ARG GLU GLU PHE GLU LYS ILE ASP SEQRES 6 A 572 ALA VAL GLU MET LEU MET PRO ALA LEU LEU PRO ALA GLU SEQRES 7 A 572 LEU TRP LYS GLU SER GLY ARG TYR GLU THR TYR GLY PRO SEQRES 8 A 572 ASN LEU TYR ARG LEU LYS ASP ARG ASN ASP ARG ASP TYR SEQRES 9 A 572 ILE LEU GLY PRO THR HIS GLU GLU THR PHE THR GLU LEU SEQRES 10 A 572 ILE ARG ASP GLU ILE ASN SER TYR LYS ARG LEU PRO LEU SEQRES 11 A 572 ASN LEU TYR GLN ILE GLN THR LYS TYR ARG ASP GLU LYS SEQRES 12 A 572 ARG SER ARG SER GLY LEU LEU ARG GLY ARG GLU PHE ILE SEQRES 13 A 572 MET LYS ASP GLY TYR SER PHE HIS ALA ASP GLU ALA SER SEQRES 14 A 572 LEU ASP GLN SER TYR ARG ASP TYR GLU LYS ALA TYR SER SEQRES 15 A 572 ARG ILE PHE GLU ARG CYS GLY LEU GLU PHE ARG ALA ILE SEQRES 16 A 572 ILE GLY ASP GLY GLY ALA MET GLY GLY LYS ASP SER LYS SEQRES 17 A 572 GLU PHE MET ALA ILE SER GLU ILE GLY GLU ASP THR ILE SEQRES 18 A 572 CYS TYR SER THR GLU SER ASP TYR ALA ALA ASN LEU GLU SEQRES 19 A 572 MET ALA THR SER LEU TYR THR PRO LYS LYS SER HIS GLU SEQRES 20 A 572 THR GLN LEU ASP LEU GLU LYS ILE ALA THR PRO GLU VAL SEQRES 21 A 572 GLY THR ILE ALA GLU VAL ALA ASN PHE PHE GLU VAL GLU SEQRES 22 A 572 PRO GLN ARG ILE ILE LYS SER VAL LEU PHE ILE ALA ASP SEQRES 23 A 572 GLU GLU PRO VAL MET VAL LEU VAL ARG GLY ASP HIS ASP SEQRES 24 A 572 VAL ASN ASP VAL LYS LEU LYS ASN PHE LEU GLY ALA ASP SEQRES 25 A 572 PHE LEU ASP GLU ALA THR GLU GLU ASP ALA ARG ARG VAL SEQRES 26 A 572 LEU GLY ALA GLY PHE GLY SER ILE GLY PRO VAL ASN VAL SEQRES 27 A 572 SER GLU ASP VAL LYS ILE TYR ALA ASP LEU ALA VAL GLN SEQRES 28 A 572 ASP LEU ALA ASN ALA ILE VAL GLY ALA ASN GLU ASP GLY SEQRES 29 A 572 TYR HIS LEU THR ASN VAL ASN PRO ASP ARG ASP PHE GLN SEQRES 30 A 572 PRO ILE SER TYR GLU ASP LEU ARG PHE VAL GLN GLU GLY SEQRES 31 A 572 ASP PRO SER PRO ASP GLY ASN GLY VAL LEU ALA PHE THR SEQRES 32 A 572 LYS GLY ILE GLU ILE GLY HIS ILE PHE LYS LEU GLY THR SEQRES 33 A 572 ARG TYR SER ASP ALA MET GLY ALA THR VAL LEU ASP GLU SEQRES 34 A 572 ASN GLY ARG GLU LYS SER VAL ILE MET GLY CYS TYR GLY SEQRES 35 A 572 ILE GLY VAL SER ARG LEU LEU SER ALA ILE VAL GLU GLN SEQRES 36 A 572 ASN ALA ASP GLU ARG GLY ILE ASN TRP PRO THR GLY ILE SEQRES 37 A 572 ALA PRO PHE ASP LEU HIS VAL VAL GLN MET ASN VAL LYS SEQRES 38 A 572 ASP GLU TYR GLN THR LYS LEU SER GLN GLU VAL GLU ALA SEQRES 39 A 572 MET MET THR GLU ALA GLY TYR GLU VAL LEU VAL ASP ASP SEQRES 40 A 572 ARG ASN GLU ARG ALA GLY VAL LYS PHE ALA ASP ALA ASP SEQRES 41 A 572 LEU ILE GLY CYS PRO ILE ARG ILE THR VAL GLY LYS LYS SEQRES 42 A 572 ALA VAL ASP GLY VAL VAL GLU VAL LYS ILE LYS ARG THR SEQRES 43 A 572 GLY GLU MET LEU GLU VAL ARG LYS GLU GLU LEU GLU SER SEQRES 44 A 572 THR LEU SER ILE LEU MET ASN THR THR SER GLU VAL GLU SEQRES 1 B 572 MET LYS GLN SER LYS MET LEU ILE PRO THR LEU ARG GLU SEQRES 2 B 572 VAL PRO ASN ASP ALA GLU VAL LEU SER HIS GLN ILE LEU SEQRES 3 B 572 LEU ARG ALA GLY TYR ILE ARG GLN VAL ALA ALA GLY ILE SEQRES 4 B 572 TYR SER TYR LEU PRO LEU ALA ASN ARG VAL LEU GLU LYS SEQRES 5 B 572 LEU LYS THR ILE MET ARG GLU GLU PHE GLU LYS ILE ASP SEQRES 6 B 572 ALA VAL GLU MET LEU MET PRO ALA LEU LEU PRO ALA GLU SEQRES 7 B 572 LEU TRP LYS GLU SER GLY ARG TYR GLU THR TYR GLY PRO SEQRES 8 B 572 ASN LEU TYR ARG LEU LYS ASP ARG ASN ASP ARG ASP TYR SEQRES 9 B 572 ILE LEU GLY PRO THR HIS GLU GLU THR PHE THR GLU LEU SEQRES 10 B 572 ILE ARG ASP GLU ILE ASN SER TYR LYS ARG LEU PRO LEU SEQRES 11 B 572 ASN LEU TYR GLN ILE GLN THR LYS TYR ARG ASP GLU LYS SEQRES 12 B 572 ARG SER ARG SER GLY LEU LEU ARG GLY ARG GLU PHE ILE SEQRES 13 B 572 MET LYS ASP GLY TYR SER PHE HIS ALA ASP GLU ALA SER SEQRES 14 B 572 LEU ASP GLN SER TYR ARG ASP TYR GLU LYS ALA TYR SER SEQRES 15 B 572 ARG ILE PHE GLU ARG CYS GLY LEU GLU PHE ARG ALA ILE SEQRES 16 B 572 ILE GLY ASP GLY GLY ALA MET GLY GLY LYS ASP SER LYS SEQRES 17 B 572 GLU PHE MET ALA ILE SER GLU ILE GLY GLU ASP THR ILE SEQRES 18 B 572 CYS TYR SER THR GLU SER ASP TYR ALA ALA ASN LEU GLU SEQRES 19 B 572 MET ALA THR SER LEU TYR THR PRO LYS LYS SER HIS GLU SEQRES 20 B 572 THR GLN LEU ASP LEU GLU LYS ILE ALA THR PRO GLU VAL SEQRES 21 B 572 GLY THR ILE ALA GLU VAL ALA ASN PHE PHE GLU VAL GLU SEQRES 22 B 572 PRO GLN ARG ILE ILE LYS SER VAL LEU PHE ILE ALA ASP SEQRES 23 B 572 GLU GLU PRO VAL MET VAL LEU VAL ARG GLY ASP HIS ASP SEQRES 24 B 572 VAL ASN ASP VAL LYS LEU LYS ASN PHE LEU GLY ALA ASP SEQRES 25 B 572 PHE LEU ASP GLU ALA THR GLU GLU ASP ALA ARG ARG VAL SEQRES 26 B 572 LEU GLY ALA GLY PHE GLY SER ILE GLY PRO VAL ASN VAL SEQRES 27 B 572 SER GLU ASP VAL LYS ILE TYR ALA ASP LEU ALA VAL GLN SEQRES 28 B 572 ASP LEU ALA ASN ALA ILE VAL GLY ALA ASN GLU ASP GLY SEQRES 29 B 572 TYR HIS LEU THR ASN VAL ASN PRO ASP ARG ASP PHE GLN SEQRES 30 B 572 PRO ILE SER TYR GLU ASP LEU ARG PHE VAL GLN GLU GLY SEQRES 31 B 572 ASP PRO SER PRO ASP GLY ASN GLY VAL LEU ALA PHE THR SEQRES 32 B 572 LYS GLY ILE GLU ILE GLY HIS ILE PHE LYS LEU GLY THR SEQRES 33 B 572 ARG TYR SER ASP ALA MET GLY ALA THR VAL LEU ASP GLU SEQRES 34 B 572 ASN GLY ARG GLU LYS SER VAL ILE MET GLY CYS TYR GLY SEQRES 35 B 572 ILE GLY VAL SER ARG LEU LEU SER ALA ILE VAL GLU GLN SEQRES 36 B 572 ASN ALA ASP GLU ARG GLY ILE ASN TRP PRO THR GLY ILE SEQRES 37 B 572 ALA PRO PHE ASP LEU HIS VAL VAL GLN MET ASN VAL LYS SEQRES 38 B 572 ASP GLU TYR GLN THR LYS LEU SER GLN GLU VAL GLU ALA SEQRES 39 B 572 MET MET THR GLU ALA GLY TYR GLU VAL LEU VAL ASP ASP SEQRES 40 B 572 ARG ASN GLU ARG ALA GLY VAL LYS PHE ALA ASP ALA ASP SEQRES 41 B 572 LEU ILE GLY CYS PRO ILE ARG ILE THR VAL GLY LYS LYS SEQRES 42 B 572 ALA VAL ASP GLY VAL VAL GLU VAL LYS ILE LYS ARG THR SEQRES 43 B 572 GLY GLU MET LEU GLU VAL ARG LYS GLU GLU LEU GLU SER SEQRES 44 B 572 THR LEU SER ILE LEU MET ASN THR THR SER GLU VAL GLU HET ATP A 701 31 HET PRI A1566 7 HET MN A1567 1 HET MN A1568 1 HET ATP B 701 31 HET PRI B1566 7 HET MN B1567 1 HET MN B1568 1 HET MN B1569 1 HET MN B1570 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM PRI PYRROLIDINE-2-CARBALDEHYDE HETNAM MN MANGANESE (II) ION HETSYN PRI PROLINOL FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 PRI 2(C5 H9 N O) FORMUL 5 MN 6(MN 2+) FORMUL 13 HOH *363(H2 O) HELIX 1 1 GLN A 3 MET A 6 5 4 HELIX 2 2 VAL A 20 ALA A 29 1 10 HELIX 3 3 LEU A 43 LYS A 63 1 21 HELIX 4 4 ALA A 77 GLY A 84 1 8 HELIX 5 5 GLY A 84 TYR A 89 1 6 HELIX 6 6 HIS A 110 ILE A 122 1 13 HELIX 7 7 TYR A 125 LEU A 128 5 4 HELIX 8 8 SER A 147 GLY A 152 5 6 HELIX 9 9 ASP A 166 CYS A 188 1 23 HELIX 10 10 THR A 262 GLU A 271 1 10 HELIX 11 11 ASN A 301 GLY A 310 1 10 HELIX 12 12 THR A 318 GLY A 327 1 10 HELIX 13 13 GLY A 329 ILE A 333 5 5 HELIX 14 14 ALA A 349 LEU A 353 5 5 HELIX 15 15 THR A 416 GLY A 423 1 8 HELIX 16 16 VAL A 445 ALA A 457 1 13 HELIX 17 17 ASP A 482 ALA A 499 1 18 HELIX 18 18 ARG A 511 GLY A 523 1 13 HELIX 19 19 LYS A 533 ASP A 536 5 4 HELIX 20 20 GLU A 556 MET A 565 1 10 HELIX 21 21 GLN B 3 MET B 6 5 4 HELIX 22 22 VAL B 20 ALA B 29 1 10 HELIX 23 23 LEU B 43 LYS B 63 1 21 HELIX 24 24 ALA B 77 GLY B 84 1 8 HELIX 25 25 GLY B 84 TYR B 89 1 6 HELIX 26 26 HIS B 110 ILE B 122 1 13 HELIX 27 27 TYR B 125 LEU B 128 5 4 HELIX 28 28 SER B 147 GLY B 152 5 6 HELIX 29 29 ASP B 166 CYS B 188 1 23 HELIX 30 30 THR B 262 GLU B 271 1 10 HELIX 31 31 GLU B 273 ARG B 276 5 4 HELIX 32 32 ASN B 301 GLY B 310 1 10 HELIX 33 33 THR B 318 GLY B 327 1 10 HELIX 34 34 ALA B 349 GLN B 351 5 3 HELIX 35 35 THR B 416 GLY B 423 1 8 HELIX 36 36 VAL B 445 ASN B 456 1 12 HELIX 37 37 ASP B 482 ALA B 499 1 18 HELIX 38 38 ARG B 511 GLY B 523 1 13 HELIX 39 39 GLY B 531 ASP B 536 5 6 HELIX 40 40 GLU B 556 MET B 565 1 10 SHEET 1 AA 2 ILE A 32 ALA A 36 0 SHEET 2 AA 2 ILE A 39 TYR A 42 -1 O ILE A 39 N VAL A 35 SHEET 1 AB10 VAL A 67 GLU A 68 0 SHEET 2 AB10 LEU A 130 TYR A 139 1 O ASN A 131 N VAL A 67 SHEET 3 AB10 GLU A 154 HIS A 164 -1 O PHE A 155 N LYS A 138 SHEET 4 AB10 ILE A 437 GLY A 444 -1 O ILE A 437 N HIS A 164 SHEET 5 AB10 LEU A 400 GLY A 415 1 O ILE A 408 N GLY A 444 SHEET 6 AB10 SER A 207 ILE A 213 -1 O LYS A 208 N ILE A 411 SHEET 7 AB10 PHE A 192 ILE A 196 -1 O ARG A 193 N MET A 211 SHEET 8 AB10 ALA A 230 ASN A 232 -1 O ALA A 230 N ILE A 196 SHEET 9 AB10 ASP A 219 SER A 224 -1 O CYS A 222 N ALA A 231 SHEET 10 AB10 VAL A 67 GLU A 68 0 SHEET 1 AC 3 LEU A 74 PRO A 76 0 SHEET 2 AC 3 ASP A 103 LEU A 106 -1 O ILE A 105 N LEU A 75 SHEET 3 AC 3 TYR A 94 LYS A 97 -1 O TYR A 94 N LEU A 106 SHEET 1 AD 3 GLU A 253 ALA A 256 0 SHEET 2 AD 3 TYR A 365 VAL A 370 -1 O HIS A 366 N ILE A 255 SHEET 3 AD 3 ALA A 356 GLY A 359 -1 O ALA A 356 N VAL A 370 SHEET 1 AE 5 LEU A 314 GLU A 316 0 SHEET 2 AE 5 ILE A 278 ALA A 285 -1 O ILE A 284 N ASP A 315 SHEET 3 AE 5 GLU A 288 ARG A 295 -1 O GLU A 288 N ALA A 285 SHEET 4 AE 5 LYS A 343 ASP A 347 1 O LYS A 343 N MET A 291 SHEET 5 AE 5 TYR A 381 GLU A 382 1 N GLU A 382 O ALA A 346 SHEET 1 AF 2 THR A 425 LEU A 427 0 SHEET 2 AF 2 GLU A 433 SER A 435 -1 O LYS A 434 N VAL A 426 SHEET 1 AG 5 VAL A 503 ASP A 506 0 SHEET 2 AG 5 LEU A 473 GLN A 477 1 O LEU A 473 N LEU A 504 SHEET 3 AG 5 ILE A 526 VAL A 530 1 O ILE A 526 N HIS A 474 SHEET 4 AG 5 VAL A 538 ILE A 543 -1 O GLU A 540 N THR A 529 SHEET 5 AG 5 GLU A 548 ARG A 553 -1 O GLU A 548 N ILE A 543 SHEET 1 BA 2 ILE B 32 ALA B 36 0 SHEET 2 BA 2 ILE B 39 TYR B 42 -1 O ILE B 39 N VAL B 35 SHEET 1 BB10 VAL B 67 GLU B 68 0 SHEET 2 BB10 LEU B 130 TYR B 139 1 O ASN B 131 N VAL B 67 SHEET 3 BB10 GLU B 154 HIS B 164 -1 O PHE B 155 N LYS B 138 SHEET 4 BB10 ILE B 437 GLY B 444 -1 O ILE B 437 N HIS B 164 SHEET 5 BB10 LEU B 400 GLY B 415 1 O ILE B 408 N GLY B 444 SHEET 6 BB10 SER B 207 ILE B 213 -1 O LYS B 208 N ILE B 411 SHEET 7 BB10 PHE B 192 ILE B 196 -1 O ARG B 193 N MET B 211 SHEET 8 BB10 ALA B 230 ASN B 232 -1 O ALA B 230 N ILE B 196 SHEET 9 BB10 ASP B 219 SER B 224 -1 O CYS B 222 N ALA B 231 SHEET 10 BB10 VAL B 67 GLU B 68 0 SHEET 1 BC 3 LEU B 74 PRO B 76 0 SHEET 2 BC 3 ASP B 103 LEU B 106 -1 O ILE B 105 N LEU B 75 SHEET 3 BC 3 TYR B 94 LYS B 97 -1 O TYR B 94 N LEU B 106 SHEET 1 BD 3 GLU B 253 ALA B 256 0 SHEET 2 BD 3 TYR B 365 VAL B 370 -1 O HIS B 366 N ILE B 255 SHEET 3 BD 3 ALA B 356 GLY B 359 -1 O ALA B 356 N VAL B 370 SHEET 1 BE 5 LEU B 314 GLU B 316 0 SHEET 2 BE 5 ILE B 278 ALA B 285 -1 O ILE B 284 N ASP B 315 SHEET 3 BE 5 GLU B 288 ARG B 295 -1 O GLU B 288 N ALA B 285 SHEET 4 BE 5 LYS B 343 ASP B 347 1 O LYS B 343 N MET B 291 SHEET 5 BE 5 SER B 380 GLU B 382 1 O SER B 380 N ALA B 346 SHEET 1 BF 2 THR B 425 LEU B 427 0 SHEET 2 BF 2 GLU B 433 SER B 435 -1 O LYS B 434 N VAL B 426 SHEET 1 BG 2 ALA B 457 ASP B 458 0 SHEET 2 BG 2 GLY B 461 ILE B 462 -1 O GLY B 461 N ASP B 458 SHEET 1 BH 5 VAL B 503 ASP B 506 0 SHEET 2 BH 5 LEU B 473 GLN B 477 1 O LEU B 473 N LEU B 504 SHEET 3 BH 5 ILE B 526 VAL B 530 1 O ILE B 526 N HIS B 474 SHEET 4 BH 5 VAL B 538 ILE B 543 -1 O GLU B 540 N THR B 529 SHEET 5 BH 5 MET B 549 ARG B 553 -1 O LEU B 550 N VAL B 541 LINK OE2 GLU A 407 MN MN A1567 1555 1555 2.25 LINK OE1 GLU A 407 MN MN A1568 1555 1555 2.30 LINK ND1 HIS A 410 MN MN A1567 1555 1555 2.16 LINK O2B ATP A 701 MN MN A1567 1555 1555 1.89 LINK O1A ATP A 701 MN MN A1567 1555 1555 2.29 LINK O1G ATP A 701 MN MN A1568 1555 1555 2.14 LINK O2B ATP A 701 MN MN A1568 1555 1555 2.31 LINK O1B ATP A 701 MN MN B1570 1555 1555 2.07 LINK O2G ATP A 701 MN MN B1570 1555 1555 2.48 LINK MN MN A1567 O HOH A2200 1555 1555 2.29 LINK MN MN A1568 O HOH A2201 1555 1555 2.26 LINK OE2 GLU B 407 MN MN B1567 1555 1555 2.29 LINK OE1 GLU B 407 MN MN B1568 1555 1555 2.19 LINK ND1 HIS B 410 MN MN B1567 1555 1555 2.19 LINK O2B ATP B 701 MN MN B1567 1555 1555 2.25 LINK O1A ATP B 701 MN MN B1567 1555 1555 2.15 LINK O1G ATP B 701 MN MN B1568 1555 1555 1.94 LINK O2B ATP B 701 MN MN B1568 1555 1555 2.28 LINK O1B ATP B 701 MN MN B1569 1555 1555 2.28 LINK O2G ATP B 701 MN MN B1569 1555 1555 2.18 LINK MN MN B1567 O HOH B2157 1555 1555 2.03 LINK MN MN B1568 O HOH B2158 1555 1555 2.23 LINK MN MN B1569 O HOH B2159 1555 1555 2.36 LINK MN MN B1569 O HOH B2160 1555 1555 2.24 LINK MN MN B1570 O HOH B2161 1555 1555 2.38 LINK MN MN B1570 O HOH B2162 1555 1555 2.30 CISPEP 1 LEU A 128 PRO A 129 0 -1.41 CISPEP 2 LEU B 128 PRO B 129 0 -0.68 SITE 1 AC1 5 GLU A 407 HIS A 410 ATP A 701 MN A1568 SITE 2 AC1 5 HOH A2200 SITE 1 AC2 4 GLU A 407 ATP A 701 MN A1567 HOH A2201 SITE 1 AC3 5 GLU B 407 HIS B 410 ATP B 701 MN B1568 SITE 2 AC3 5 HOH B2157 SITE 1 AC4 5 GLU B 209 GLU B 407 ATP B 701 MN B1567 SITE 2 AC4 5 HOH B2158 SITE 1 AC5 3 ATP B 701 HOH B2159 HOH B2160 SITE 1 AC6 3 ATP A 701 HOH B2161 HOH B2162 SITE 1 AC7 23 ARG A 140 GLU A 142 LEU A 150 ARG A 151 SITE 2 AC7 23 GLY A 152 PHE A 155 MET A 157 GLU A 407 SITE 3 AC7 23 ILE A 408 GLY A 409 HIS A 410 GLY A 444 SITE 4 AC7 23 ARG A 447 PRI A1566 MN A1567 MN A1568 SITE 5 AC7 23 HOH A2064 HOH A2084 HOH A2199 HOH A2200 SITE 6 AC7 23 HOH A2201 MN B1570 HOH B2162 SITE 1 AC8 11 THR A 109 GLU A 111 ARG A 140 MET A 157 SITE 2 AC8 11 TYR A 161 PHE A 412 CYS A 440 TYR A 441 SITE 3 AC8 11 GLY A 442 ATP A 701 HOH A2030 SITE 1 AC9 23 ARG B 140 GLU B 142 ARG B 151 GLY B 152 SITE 2 AC9 23 PHE B 155 MET B 157 GLU B 407 ILE B 408 SITE 3 AC9 23 GLY B 409 HIS B 410 GLY B 444 ARG B 447 SITE 4 AC9 23 PRI B1566 MN B1567 MN B1568 MN B1569 SITE 5 AC9 23 HOH B2066 HOH B2087 HOH B2088 HOH B2154 SITE 6 AC9 23 HOH B2157 HOH B2158 HOH B2160 SITE 1 BC1 12 THR B 109 GLU B 111 ARG B 140 MET B 157 SITE 2 BC1 12 ASP B 159 TYR B 161 CYS B 440 TYR B 441 SITE 3 BC1 12 GLY B 442 ATP B 701 HOH B2033 HOH B2156 CRYST1 68.583 92.679 101.223 90.00 106.11 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014581 0.000000 0.004211 0.00000 SCALE2 0.000000 0.010790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010283 0.00000 MTRIX1 1 -0.998551 0.002973 0.053737 33.09580 1 MTRIX2 1 -0.053388 -0.180733 -0.982082 20.34590 1 MTRIX3 1 0.006792 -0.983528 0.180630 15.67670 1