data_2J44 # _entry.id 2J44 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2J44 pdb_00002j44 10.2210/pdb2j44/pdb PDBE EBI-29835 ? ? WWPDB D_1290029835 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2J44 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-08-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lammerts van Bueren, A.' 1 'Higgins, M.' 2 'Wang, D.' 3 'Burke, R.D.' 4 'Boraston, A.B.' 5 # _citation.id primary _citation.title 'Identification and Structural Basis of Binding to Host Lung Glycogen by Streptococcal Virulence Factors.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 14 _citation.page_first 76 _citation.page_last ? _citation.year 2007 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17187076 _citation.pdbx_database_id_DOI 10.1038/NSMB1187 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lammerts Van Bueren, A.' 1 ? primary 'Higgins, M.' 2 ? primary 'Wang, D.' 3 ? primary 'Burke, R.D.' 4 ? primary 'Boraston, A.B.' 5 ? # _cell.entry_id 2J44 _cell.length_a 50.555 _cell.length_b 89.124 _cell.length_c 59.997 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J44 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ALKALINE AMYLOPULLULANASE' 25352.084 1 ? ? 'CARBOHYDRATE-BINDING MODULE, RESIDUES 135-312,314,316-353' 'TANDEM FAMILY 41 CARBOHYDRATE BINDING MODULES' 2 branched man 'alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose' 504.438 1 ? ? ? ? 3 branched man 'alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose' 666.578 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 5 water nat water 18.015 187 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 SPNDX 2 alpha-maltotriose 3 alpha-maltotetraose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DNYFRIHVKKLPEENKDAQGLWTWDDVEKPSENWPNGALSFKDAKKDDYGYYLDVKLKGEQAKKISFLINNTAGKNLTGD KSVEKLVPKMNEAWLDQDYKVFSYEPQPAGTVRVNYYRTDGNYDKKSLWYWGDVKNPSSAQWPDGTDFTATGKYGRYIDI PLNEAAREFGFLLLDESKGDVKIRKENYKFTDLKNHSQIFLKDDDESIYTNPYYVHD ; _entity_poly.pdbx_seq_one_letter_code_can ;DNYFRIHVKKLPEENKDAQGLWTWDDVEKPSENWPNGALSFKDAKKDDYGYYLDVKLKGEQAKKISFLINNTAGKNLTGD KSVEKLVPKMNEAWLDQDYKVFSYEPQPAGTVRVNYYRTDGNYDKKSLWYWGDVKNPSSAQWPDGTDFTATGKYGRYIDI PLNEAAREFGFLLLDESKGDVKIRKENYKFTDLKNHSQIFLKDDDESIYTNPYYVHD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ASN n 1 3 TYR n 1 4 PHE n 1 5 ARG n 1 6 ILE n 1 7 HIS n 1 8 VAL n 1 9 LYS n 1 10 LYS n 1 11 LEU n 1 12 PRO n 1 13 GLU n 1 14 GLU n 1 15 ASN n 1 16 LYS n 1 17 ASP n 1 18 ALA n 1 19 GLN n 1 20 GLY n 1 21 LEU n 1 22 TRP n 1 23 THR n 1 24 TRP n 1 25 ASP n 1 26 ASP n 1 27 VAL n 1 28 GLU n 1 29 LYS n 1 30 PRO n 1 31 SER n 1 32 GLU n 1 33 ASN n 1 34 TRP n 1 35 PRO n 1 36 ASN n 1 37 GLY n 1 38 ALA n 1 39 LEU n 1 40 SER n 1 41 PHE n 1 42 LYS n 1 43 ASP n 1 44 ALA n 1 45 LYS n 1 46 LYS n 1 47 ASP n 1 48 ASP n 1 49 TYR n 1 50 GLY n 1 51 TYR n 1 52 TYR n 1 53 LEU n 1 54 ASP n 1 55 VAL n 1 56 LYS n 1 57 LEU n 1 58 LYS n 1 59 GLY n 1 60 GLU n 1 61 GLN n 1 62 ALA n 1 63 LYS n 1 64 LYS n 1 65 ILE n 1 66 SER n 1 67 PHE n 1 68 LEU n 1 69 ILE n 1 70 ASN n 1 71 ASN n 1 72 THR n 1 73 ALA n 1 74 GLY n 1 75 LYS n 1 76 ASN n 1 77 LEU n 1 78 THR n 1 79 GLY n 1 80 ASP n 1 81 LYS n 1 82 SER n 1 83 VAL n 1 84 GLU n 1 85 LYS n 1 86 LEU n 1 87 VAL n 1 88 PRO n 1 89 LYS n 1 90 MET n 1 91 ASN n 1 92 GLU n 1 93 ALA n 1 94 TRP n 1 95 LEU n 1 96 ASP n 1 97 GLN n 1 98 ASP n 1 99 TYR n 1 100 LYS n 1 101 VAL n 1 102 PHE n 1 103 SER n 1 104 TYR n 1 105 GLU n 1 106 PRO n 1 107 GLN n 1 108 PRO n 1 109 ALA n 1 110 GLY n 1 111 THR n 1 112 VAL n 1 113 ARG n 1 114 VAL n 1 115 ASN n 1 116 TYR n 1 117 TYR n 1 118 ARG n 1 119 THR n 1 120 ASP n 1 121 GLY n 1 122 ASN n 1 123 TYR n 1 124 ASP n 1 125 LYS n 1 126 LYS n 1 127 SER n 1 128 LEU n 1 129 TRP n 1 130 TYR n 1 131 TRP n 1 132 GLY n 1 133 ASP n 1 134 VAL n 1 135 LYS n 1 136 ASN n 1 137 PRO n 1 138 SER n 1 139 SER n 1 140 ALA n 1 141 GLN n 1 142 TRP n 1 143 PRO n 1 144 ASP n 1 145 GLY n 1 146 THR n 1 147 ASP n 1 148 PHE n 1 149 THR n 1 150 ALA n 1 151 THR n 1 152 GLY n 1 153 LYS n 1 154 TYR n 1 155 GLY n 1 156 ARG n 1 157 TYR n 1 158 ILE n 1 159 ASP n 1 160 ILE n 1 161 PRO n 1 162 LEU n 1 163 ASN n 1 164 GLU n 1 165 ALA n 1 166 ALA n 1 167 ARG n 1 168 GLU n 1 169 PHE n 1 170 GLY n 1 171 PHE n 1 172 LEU n 1 173 LEU n 1 174 LEU n 1 175 ASP n 1 176 GLU n 1 177 SER n 1 178 LYS n 1 179 GLY n 1 180 ASP n 1 181 VAL n 1 182 LYS n 1 183 ILE n 1 184 ARG n 1 185 LYS n 1 186 GLU n 1 187 ASN n 1 188 TYR n 1 189 LYS n 1 190 PHE n 1 191 THR n 1 192 ASP n 1 193 LEU n 1 194 LYS n 1 195 ASN n 1 196 HIS n 1 197 SER n 1 198 GLN n 1 199 ILE n 1 200 PHE n 1 201 LEU n 1 202 LYS n 1 203 ASP n 1 204 ASP n 1 205 ASP n 1 206 GLU n 1 207 SER n 1 208 ILE n 1 209 TYR n 1 210 THR n 1 211 ASN n 1 212 PRO n 1 213 TYR n 1 214 TYR n 1 215 VAL n 1 216 HIS n 1 217 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'STREPTOCOCCUS PNEUMONIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1313 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q97SQ7_STRPN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q97SQ7 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2J44 A 1 ? 178 ? Q97SQ7 135 ? 312 ? 7 184 2 1 2J44 A 179 ? 179 ? Q97SQ7 314 ? 314 ? 185 185 3 1 2J44 A 180 ? 217 ? Q97SQ7 316 ? 353 ? 186 223 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2J44 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 46.84 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 113.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU IMAGE PLATE' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2J44 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.510 _reflns.d_resolution_high 2.100 _reflns.number_obs 15873 _reflns.number_all ? _reflns.percent_possible_obs 96.9 _reflns.pdbx_Rmerge_I_obs 0.07000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.3000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.17 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.37000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.100 _reflns_shell.pdbx_redundancy 4.31 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2J44 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15070 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 96.9 _refine.ls_R_factor_obs 0.225 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.304 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 802 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 49.09 _refine.aniso_B[1][1] -0.99000 _refine.aniso_B[2][2] 0.41000 _refine.aniso_B[3][3] 0.58000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2J43' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.243 _refine.overall_SU_ML 0.170 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.484 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1796 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 82 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 2065 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 1937 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.554 1.989 ? 2635 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.558 5.000 ? 218 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.118 0.200 ? 284 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1453 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.234 0.200 ? 952 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.209 0.200 ? 164 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.329 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.170 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.058 1.500 ? 1083 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.890 2.000 ? 1745 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.437 3.000 ? 854 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.816 4.500 ? 889 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 1083 _refine_ls_shell.R_factor_R_work 0.2380 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3370 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2J44 _struct.title 'Alpha-glucan binding by a streptococcal virulence factor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2J44 _struct_keywords.pdbx_keywords 'CARBOHYDRATE-BINDING MODULE' _struct_keywords.text 'VIRULENCE, PULLULANASE, GLYCOGEN BINDING, STREPTOCOCCUS PNEUMONIAE, CARBOHYDRATE-BINDING MODULE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 15 ? ASP A 17 ? ASN A 21 ASP A 23 5 ? 3 HELX_P HELX_P2 2 LYS A 42 ? ALA A 44 ? LYS A 48 ALA A 50 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 1 B GLC 2 1_555 ? ? ? ? ? ? ? 1.454 ? ? covale2 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 2 B GLC 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale3 covale both ? C GLC . O4 ? ? ? 1_555 C GLC . C1 ? ? C GLC 1 C GLC 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale4 covale both ? C GLC . O4 ? ? ? 1_555 C GLC . C1 ? ? C GLC 2 C GLC 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale5 covale both ? C GLC . O4 ? ? ? 1_555 C GLC . C1 ? ? C GLC 3 C GLC 4 1_555 ? ? ? ? ? ? ? 1.448 ? ? metalc1 metalc ? ? A ASP 54 OD2 ? ? ? 1_555 E ZN . ZN ? ? A ASP 60 A ZN 1225 1_555 ? ? ? ? ? ? ? 1.903 ? ? metalc2 metalc ? ? A ASP 147 OD1 ? ? ? 1_555 F ZN . ZN ? ? A ASP 153 A ZN 1226 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc3 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 D ZN . ZN ? ? A ASP 198 A ZN 1224 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc4 metalc ? ? A HIS 196 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 202 A ZN 1224 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc5 metalc ? ? A HIS 216 ND1 ? ? ? 4_444 E ZN . ZN ? ? A HIS 222 A ZN 1225 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 1225 A HOH 2177 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc7 metalc ? ? E ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 1225 A HOH 2178 1_555 ? ? ? ? ? ? ? 2.609 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 1226 A HOH 2179 1_555 ? ? ? ? ? ? ? 2.226 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TRP 34 A . ? TRP 40 A PRO 35 A ? PRO 41 A 1 -4.47 2 GLY 59 A . ? GLY 65 A GLU 60 A ? GLU 66 A 1 -0.01 3 GLU 60 A . ? GLU 66 A GLN 61 A ? GLN 67 A 1 -1.19 4 ALA 73 A . ? ALA 79 A GLY 74 A ? GLY 80 A 1 -16.79 5 GLY 121 A . ? GLY 127 A ASN 122 A ? ASN 128 A 1 -0.48 6 ASN 122 A . ? ASN 128 A TYR 123 A ? TYR 129 A 1 1.08 7 ASP 124 A . ? ASP 130 A LYS 125 A ? LYS 131 A 1 26.98 8 SER 139 A . ? SER 145 A ALA 140 A ? ALA 146 A 1 2.38 9 TRP 142 A . ? TRP 148 A PRO 143 A ? PRO 149 A 1 -0.26 10 ASP 144 A . ? ASP 150 A GLY 145 A ? GLY 151 A 1 15.92 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 4 ? AC ? 4 ? AD ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 45 ? LYS A 46 ? LYS A 51 LYS A 52 AA 2 TYR A 51 ? LYS A 56 ? TYR A 57 LYS A 62 AA 3 TYR A 3 ? VAL A 8 ? TYR A 9 VAL A 14 AA 4 GLU A 92 ? LEU A 95 ? GLU A 98 LEU A 101 AA 5 VAL A 101 ? PHE A 102 ? VAL A 107 PHE A 108 AB 1 LEU A 39 ? SER A 40 ? LEU A 45 SER A 46 AB 2 GLN A 19 ? ASP A 25 ? GLN A 25 ASP A 31 AB 3 LYS A 64 ? ASN A 71 ? LYS A 70 ASN A 77 AB 4 LYS A 81 ? GLU A 84 ? LYS A 87 GLU A 90 AC 1 ALA A 150 ? GLY A 152 ? ALA A 156 GLY A 158 AC 2 GLY A 155 ? PRO A 161 ? GLY A 161 PRO A 167 AC 3 THR A 111 ? TYR A 117 ? THR A 117 TYR A 123 AC 4 GLN A 198 ? LYS A 202 ? GLN A 204 LYS A 208 AD 1 THR A 146 ? ASP A 147 ? THR A 152 ASP A 153 AD 2 LYS A 126 ? TRP A 131 ? LYS A 132 TRP A 137 AD 3 PHE A 169 ? ASP A 175 ? PHE A 175 ASP A 181 AD 4 TYR A 188 ? PHE A 190 ? TYR A 194 PHE A 196 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LYS A 45 ? N LYS A 51 O TYR A 52 ? O TYR A 58 AA 2 3 N VAL A 55 ? N VAL A 61 O PHE A 4 ? O PHE A 10 AA 3 4 N HIS A 7 ? N HIS A 13 O ALA A 93 ? O ALA A 99 AA 4 5 N TRP A 94 ? N TRP A 100 O PHE A 102 ? O PHE A 108 AB 1 2 N LEU A 39 ? N LEU A 45 O LEU A 21 ? O LEU A 27 AB 2 3 N TRP A 24 ? N TRP A 30 O SER A 66 ? O SER A 72 AB 3 4 N PHE A 67 ? N PHE A 73 O LYS A 81 ? O LYS A 87 AC 1 2 N GLY A 152 ? N GLY A 158 O GLY A 155 ? O GLY A 161 AC 2 3 N ILE A 160 ? N ILE A 166 O VAL A 112 ? O VAL A 118 AC 3 4 N ASN A 115 ? N ASN A 121 O ILE A 199 ? O ILE A 205 AD 1 2 N THR A 146 ? N THR A 152 O LEU A 128 ? O LEU A 134 AD 2 3 N TRP A 131 ? N TRP A 137 O GLY A 170 ? O GLY A 176 AD 3 4 N PHE A 171 ? N PHE A 177 O TYR A 188 ? O TYR A 194 # _database_PDB_matrix.entry_id 2J44 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2J44 _atom_sites.fract_transf_matrix[1][1] 0.019780 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011220 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016667 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 7 7 ASP ASP A . n A 1 2 ASN 2 8 8 ASN ASN A . n A 1 3 TYR 3 9 9 TYR TYR A . n A 1 4 PHE 4 10 10 PHE PHE A . n A 1 5 ARG 5 11 11 ARG ARG A . n A 1 6 ILE 6 12 12 ILE ILE A . n A 1 7 HIS 7 13 13 HIS HIS A . n A 1 8 VAL 8 14 14 VAL VAL A . n A 1 9 LYS 9 15 15 LYS LYS A . n A 1 10 LYS 10 16 16 LYS LYS A . n A 1 11 LEU 11 17 17 LEU LEU A . n A 1 12 PRO 12 18 18 PRO PRO A . n A 1 13 GLU 13 19 19 GLU GLU A . n A 1 14 GLU 14 20 20 GLU GLU A . n A 1 15 ASN 15 21 21 ASN ASN A . n A 1 16 LYS 16 22 22 LYS LYS A . n A 1 17 ASP 17 23 23 ASP ASP A . n A 1 18 ALA 18 24 24 ALA ALA A . n A 1 19 GLN 19 25 25 GLN GLN A . n A 1 20 GLY 20 26 26 GLY GLY A . n A 1 21 LEU 21 27 27 LEU LEU A . n A 1 22 TRP 22 28 28 TRP TRP A . n A 1 23 THR 23 29 29 THR THR A . n A 1 24 TRP 24 30 30 TRP TRP A . n A 1 25 ASP 25 31 31 ASP ASP A . n A 1 26 ASP 26 32 32 ASP ASP A . n A 1 27 VAL 27 33 33 VAL VAL A . n A 1 28 GLU 28 34 34 GLU GLU A . n A 1 29 LYS 29 35 35 LYS LYS A . n A 1 30 PRO 30 36 36 PRO PRO A . n A 1 31 SER 31 37 37 SER SER A . n A 1 32 GLU 32 38 38 GLU GLU A . n A 1 33 ASN 33 39 39 ASN ASN A . n A 1 34 TRP 34 40 40 TRP TRP A . n A 1 35 PRO 35 41 41 PRO PRO A . n A 1 36 ASN 36 42 42 ASN ASN A . n A 1 37 GLY 37 43 43 GLY GLY A . n A 1 38 ALA 38 44 44 ALA ALA A . n A 1 39 LEU 39 45 45 LEU LEU A . n A 1 40 SER 40 46 46 SER SER A . n A 1 41 PHE 41 47 47 PHE PHE A . n A 1 42 LYS 42 48 48 LYS LYS A . n A 1 43 ASP 43 49 49 ASP ASP A . n A 1 44 ALA 44 50 50 ALA ALA A . n A 1 45 LYS 45 51 51 LYS LYS A . n A 1 46 LYS 46 52 52 LYS LYS A . n A 1 47 ASP 47 53 53 ASP ASP A . n A 1 48 ASP 48 54 54 ASP ASP A . n A 1 49 TYR 49 55 55 TYR TYR A . n A 1 50 GLY 50 56 56 GLY GLY A . n A 1 51 TYR 51 57 57 TYR TYR A . n A 1 52 TYR 52 58 58 TYR TYR A . n A 1 53 LEU 53 59 59 LEU LEU A . n A 1 54 ASP 54 60 60 ASP ASP A . n A 1 55 VAL 55 61 61 VAL VAL A . n A 1 56 LYS 56 62 62 LYS LYS A . n A 1 57 LEU 57 63 63 LEU LEU A . n A 1 58 LYS 58 64 64 LYS LYS A . n A 1 59 GLY 59 65 65 GLY GLY A . n A 1 60 GLU 60 66 66 GLU GLU A . n A 1 61 GLN 61 67 67 GLN GLN A . n A 1 62 ALA 62 68 68 ALA ALA A . n A 1 63 LYS 63 69 69 LYS LYS A . n A 1 64 LYS 64 70 70 LYS LYS A . n A 1 65 ILE 65 71 71 ILE ILE A . n A 1 66 SER 66 72 72 SER SER A . n A 1 67 PHE 67 73 73 PHE PHE A . n A 1 68 LEU 68 74 74 LEU LEU A . n A 1 69 ILE 69 75 75 ILE ILE A . n A 1 70 ASN 70 76 76 ASN ASN A . n A 1 71 ASN 71 77 77 ASN ASN A . n A 1 72 THR 72 78 78 THR THR A . n A 1 73 ALA 73 79 79 ALA ALA A . n A 1 74 GLY 74 80 80 GLY GLY A . n A 1 75 LYS 75 81 81 LYS LYS A . n A 1 76 ASN 76 82 82 ASN ASN A . n A 1 77 LEU 77 83 83 LEU LEU A . n A 1 78 THR 78 84 84 THR THR A . n A 1 79 GLY 79 85 85 GLY GLY A . n A 1 80 ASP 80 86 86 ASP ASP A . n A 1 81 LYS 81 87 87 LYS LYS A . n A 1 82 SER 82 88 88 SER SER A . n A 1 83 VAL 83 89 89 VAL VAL A . n A 1 84 GLU 84 90 90 GLU GLU A . n A 1 85 LYS 85 91 91 LYS LYS A . n A 1 86 LEU 86 92 92 LEU LEU A . n A 1 87 VAL 87 93 93 VAL VAL A . n A 1 88 PRO 88 94 94 PRO PRO A . n A 1 89 LYS 89 95 95 LYS LYS A . n A 1 90 MET 90 96 96 MET MET A . n A 1 91 ASN 91 97 97 ASN ASN A . n A 1 92 GLU 92 98 98 GLU GLU A . n A 1 93 ALA 93 99 99 ALA ALA A . n A 1 94 TRP 94 100 100 TRP TRP A . n A 1 95 LEU 95 101 101 LEU LEU A . n A 1 96 ASP 96 102 102 ASP ASP A . n A 1 97 GLN 97 103 103 GLN GLN A . n A 1 98 ASP 98 104 104 ASP ASP A . n A 1 99 TYR 99 105 105 TYR TYR A . n A 1 100 LYS 100 106 106 LYS LYS A . n A 1 101 VAL 101 107 107 VAL VAL A . n A 1 102 PHE 102 108 108 PHE PHE A . n A 1 103 SER 103 109 109 SER SER A . n A 1 104 TYR 104 110 110 TYR TYR A . n A 1 105 GLU 105 111 111 GLU GLU A . n A 1 106 PRO 106 112 112 PRO PRO A . n A 1 107 GLN 107 113 113 GLN GLN A . n A 1 108 PRO 108 114 114 PRO PRO A . n A 1 109 ALA 109 115 115 ALA ALA A . n A 1 110 GLY 110 116 116 GLY GLY A . n A 1 111 THR 111 117 117 THR THR A . n A 1 112 VAL 112 118 118 VAL VAL A . n A 1 113 ARG 113 119 119 ARG ARG A . n A 1 114 VAL 114 120 120 VAL VAL A . n A 1 115 ASN 115 121 121 ASN ASN A . n A 1 116 TYR 116 122 122 TYR TYR A . n A 1 117 TYR 117 123 123 TYR TYR A . n A 1 118 ARG 118 124 124 ARG ARG A . n A 1 119 THR 119 125 125 THR THR A . n A 1 120 ASP 120 126 126 ASP ASP A . n A 1 121 GLY 121 127 127 GLY GLY A . n A 1 122 ASN 122 128 128 ASN ASN A . n A 1 123 TYR 123 129 129 TYR TYR A . n A 1 124 ASP 124 130 130 ASP ASP A . n A 1 125 LYS 125 131 131 LYS LYS A . n A 1 126 LYS 126 132 132 LYS LYS A . n A 1 127 SER 127 133 133 SER SER A . n A 1 128 LEU 128 134 134 LEU LEU A . n A 1 129 TRP 129 135 135 TRP TRP A . n A 1 130 TYR 130 136 136 TYR TYR A . n A 1 131 TRP 131 137 137 TRP TRP A . n A 1 132 GLY 132 138 138 GLY GLY A . n A 1 133 ASP 133 139 139 ASP ASP A . n A 1 134 VAL 134 140 140 VAL VAL A . n A 1 135 LYS 135 141 141 LYS LYS A . n A 1 136 ASN 136 142 142 ASN ASN A . n A 1 137 PRO 137 143 143 PRO PRO A . n A 1 138 SER 138 144 144 SER SER A . n A 1 139 SER 139 145 145 SER SER A . n A 1 140 ALA 140 146 146 ALA ALA A . n A 1 141 GLN 141 147 147 GLN GLN A . n A 1 142 TRP 142 148 148 TRP TRP A . n A 1 143 PRO 143 149 149 PRO PRO A . n A 1 144 ASP 144 150 150 ASP ASP A . n A 1 145 GLY 145 151 151 GLY GLY A . n A 1 146 THR 146 152 152 THR THR A . n A 1 147 ASP 147 153 153 ASP ASP A . n A 1 148 PHE 148 154 154 PHE PHE A . n A 1 149 THR 149 155 155 THR THR A . n A 1 150 ALA 150 156 156 ALA ALA A . n A 1 151 THR 151 157 157 THR THR A . n A 1 152 GLY 152 158 158 GLY GLY A . n A 1 153 LYS 153 159 159 LYS LYS A . n A 1 154 TYR 154 160 160 TYR TYR A . n A 1 155 GLY 155 161 161 GLY GLY A . n A 1 156 ARG 156 162 162 ARG ARG A . n A 1 157 TYR 157 163 163 TYR TYR A . n A 1 158 ILE 158 164 164 ILE ILE A . n A 1 159 ASP 159 165 165 ASP ASP A . n A 1 160 ILE 160 166 166 ILE ILE A . n A 1 161 PRO 161 167 167 PRO PRO A . n A 1 162 LEU 162 168 168 LEU LEU A . n A 1 163 ASN 163 169 169 ASN ASN A . n A 1 164 GLU 164 170 170 GLU GLU A . n A 1 165 ALA 165 171 171 ALA ALA A . n A 1 166 ALA 166 172 172 ALA ALA A . n A 1 167 ARG 167 173 173 ARG ARG A . n A 1 168 GLU 168 174 174 GLU GLU A . n A 1 169 PHE 169 175 175 PHE PHE A . n A 1 170 GLY 170 176 176 GLY GLY A . n A 1 171 PHE 171 177 177 PHE PHE A . n A 1 172 LEU 172 178 178 LEU LEU A . n A 1 173 LEU 173 179 179 LEU LEU A . n A 1 174 LEU 174 180 180 LEU LEU A . n A 1 175 ASP 175 181 181 ASP ASP A . n A 1 176 GLU 176 182 182 GLU GLU A . n A 1 177 SER 177 183 183 SER SER A . n A 1 178 LYS 178 184 184 LYS LYS A . n A 1 179 GLY 179 185 185 GLY GLY A . n A 1 180 ASP 180 186 186 ASP ASP A . n A 1 181 VAL 181 187 187 VAL VAL A . n A 1 182 LYS 182 188 188 LYS LYS A . n A 1 183 ILE 183 189 189 ILE ILE A . n A 1 184 ARG 184 190 190 ARG ARG A . n A 1 185 LYS 185 191 191 LYS LYS A . n A 1 186 GLU 186 192 192 GLU GLU A . n A 1 187 ASN 187 193 193 ASN ASN A . n A 1 188 TYR 188 194 194 TYR TYR A . n A 1 189 LYS 189 195 195 LYS LYS A . n A 1 190 PHE 190 196 196 PHE PHE A . n A 1 191 THR 191 197 197 THR THR A . n A 1 192 ASP 192 198 198 ASP ASP A . n A 1 193 LEU 193 199 199 LEU LEU A . n A 1 194 LYS 194 200 200 LYS LYS A . n A 1 195 ASN 195 201 201 ASN ASN A . n A 1 196 HIS 196 202 202 HIS HIS A . n A 1 197 SER 197 203 203 SER SER A . n A 1 198 GLN 198 204 204 GLN GLN A . n A 1 199 ILE 199 205 205 ILE ILE A . n A 1 200 PHE 200 206 206 PHE PHE A . n A 1 201 LEU 201 207 207 LEU LEU A . n A 1 202 LYS 202 208 208 LYS LYS A . n A 1 203 ASP 203 209 209 ASP ASP A . n A 1 204 ASP 204 210 210 ASP ASP A . n A 1 205 ASP 205 211 211 ASP ASP A . n A 1 206 GLU 206 212 212 GLU GLU A . n A 1 207 SER 207 213 213 SER SER A . n A 1 208 ILE 208 214 214 ILE ILE A . n A 1 209 TYR 209 215 215 TYR TYR A . n A 1 210 THR 210 216 216 THR THR A . n A 1 211 ASN 211 217 217 ASN ASN A . n A 1 212 PRO 212 218 218 PRO PRO A . n A 1 213 TYR 213 219 219 TYR TYR A . n A 1 214 TYR 214 220 220 TYR TYR A . n A 1 215 VAL 215 221 221 VAL VAL A . n A 1 216 HIS 216 222 222 HIS HIS A . n A 1 217 ASP 217 223 223 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 1224 1224 ZN ZN A . E 4 ZN 1 1225 1225 ZN ZN A . F 4 ZN 1 1226 1226 ZN ZN A . G 5 HOH 1 2001 2001 HOH HOH A . G 5 HOH 2 2002 2002 HOH HOH A . G 5 HOH 3 2003 2003 HOH HOH A . G 5 HOH 4 2004 2004 HOH HOH A . G 5 HOH 5 2005 2005 HOH HOH A . G 5 HOH 6 2006 2006 HOH HOH A . G 5 HOH 7 2007 2007 HOH HOH A . G 5 HOH 8 2008 2008 HOH HOH A . G 5 HOH 9 2009 2009 HOH HOH A . G 5 HOH 10 2010 2010 HOH HOH A . G 5 HOH 11 2011 2011 HOH HOH A . G 5 HOH 12 2012 2012 HOH HOH A . G 5 HOH 13 2013 2013 HOH HOH A . G 5 HOH 14 2014 2014 HOH HOH A . G 5 HOH 15 2015 2015 HOH HOH A . G 5 HOH 16 2016 2016 HOH HOH A . G 5 HOH 17 2017 2017 HOH HOH A . G 5 HOH 18 2018 2018 HOH HOH A . G 5 HOH 19 2019 2019 HOH HOH A . G 5 HOH 20 2020 2020 HOH HOH A . G 5 HOH 21 2021 2021 HOH HOH A . G 5 HOH 22 2022 2022 HOH HOH A . G 5 HOH 23 2023 2023 HOH HOH A . G 5 HOH 24 2024 2024 HOH HOH A . G 5 HOH 25 2025 2025 HOH HOH A . G 5 HOH 26 2026 2026 HOH HOH A . G 5 HOH 27 2027 2027 HOH HOH A . G 5 HOH 28 2028 2028 HOH HOH A . G 5 HOH 29 2029 2029 HOH HOH A . G 5 HOH 30 2030 2030 HOH HOH A . G 5 HOH 31 2031 2031 HOH HOH A . G 5 HOH 32 2032 2032 HOH HOH A . G 5 HOH 33 2033 2033 HOH HOH A . G 5 HOH 34 2034 2034 HOH HOH A . G 5 HOH 35 2035 2035 HOH HOH A . G 5 HOH 36 2036 2036 HOH HOH A . G 5 HOH 37 2037 2037 HOH HOH A . G 5 HOH 38 2038 2038 HOH HOH A . G 5 HOH 39 2039 2039 HOH HOH A . G 5 HOH 40 2040 2040 HOH HOH A . G 5 HOH 41 2041 2041 HOH HOH A . G 5 HOH 42 2042 2042 HOH HOH A . G 5 HOH 43 2043 2043 HOH HOH A . G 5 HOH 44 2044 2044 HOH HOH A . G 5 HOH 45 2045 2045 HOH HOH A . G 5 HOH 46 2046 2046 HOH HOH A . G 5 HOH 47 2047 2047 HOH HOH A . G 5 HOH 48 2048 2048 HOH HOH A . G 5 HOH 49 2049 2049 HOH HOH A . G 5 HOH 50 2050 2050 HOH HOH A . G 5 HOH 51 2051 2051 HOH HOH A . G 5 HOH 52 2052 2052 HOH HOH A . G 5 HOH 53 2053 2053 HOH HOH A . G 5 HOH 54 2054 2054 HOH HOH A . G 5 HOH 55 2055 2055 HOH HOH A . G 5 HOH 56 2056 2056 HOH HOH A . G 5 HOH 57 2057 2057 HOH HOH A . G 5 HOH 58 2058 2058 HOH HOH A . G 5 HOH 59 2059 2059 HOH HOH A . G 5 HOH 60 2060 2060 HOH HOH A . G 5 HOH 61 2061 2061 HOH HOH A . G 5 HOH 62 2062 2062 HOH HOH A . G 5 HOH 63 2063 2063 HOH HOH A . G 5 HOH 64 2064 2064 HOH HOH A . G 5 HOH 65 2065 2065 HOH HOH A . G 5 HOH 66 2066 2066 HOH HOH A . G 5 HOH 67 2067 2067 HOH HOH A . G 5 HOH 68 2068 2068 HOH HOH A . G 5 HOH 69 2069 2069 HOH HOH A . G 5 HOH 70 2070 2070 HOH HOH A . G 5 HOH 71 2071 2071 HOH HOH A . G 5 HOH 72 2072 2072 HOH HOH A . G 5 HOH 73 2073 2073 HOH HOH A . G 5 HOH 74 2074 2074 HOH HOH A . G 5 HOH 75 2075 2075 HOH HOH A . G 5 HOH 76 2076 2076 HOH HOH A . G 5 HOH 77 2077 2077 HOH HOH A . G 5 HOH 78 2078 2078 HOH HOH A . G 5 HOH 79 2079 2079 HOH HOH A . G 5 HOH 80 2080 2080 HOH HOH A . G 5 HOH 81 2081 2081 HOH HOH A . G 5 HOH 82 2082 2082 HOH HOH A . G 5 HOH 83 2083 2083 HOH HOH A . G 5 HOH 84 2084 2084 HOH HOH A . G 5 HOH 85 2085 2085 HOH HOH A . G 5 HOH 86 2086 2086 HOH HOH A . G 5 HOH 87 2087 2087 HOH HOH A . G 5 HOH 88 2088 2088 HOH HOH A . G 5 HOH 89 2089 2089 HOH HOH A . G 5 HOH 90 2090 2090 HOH HOH A . G 5 HOH 91 2091 2091 HOH HOH A . G 5 HOH 92 2092 2092 HOH HOH A . G 5 HOH 93 2093 2093 HOH HOH A . G 5 HOH 94 2094 2094 HOH HOH A . G 5 HOH 95 2095 2095 HOH HOH A . G 5 HOH 96 2096 2096 HOH HOH A . G 5 HOH 97 2097 2097 HOH HOH A . G 5 HOH 98 2098 2098 HOH HOH A . G 5 HOH 99 2099 2099 HOH HOH A . G 5 HOH 100 2100 2100 HOH HOH A . G 5 HOH 101 2101 2101 HOH HOH A . G 5 HOH 102 2102 2102 HOH HOH A . G 5 HOH 103 2103 2103 HOH HOH A . G 5 HOH 104 2104 2104 HOH HOH A . G 5 HOH 105 2105 2105 HOH HOH A . G 5 HOH 106 2106 2106 HOH HOH A . G 5 HOH 107 2107 2107 HOH HOH A . G 5 HOH 108 2108 2108 HOH HOH A . G 5 HOH 109 2109 2109 HOH HOH A . G 5 HOH 110 2110 2110 HOH HOH A . G 5 HOH 111 2111 2111 HOH HOH A . G 5 HOH 112 2112 2112 HOH HOH A . G 5 HOH 113 2113 2113 HOH HOH A . G 5 HOH 114 2114 2114 HOH HOH A . G 5 HOH 115 2115 2115 HOH HOH A . G 5 HOH 116 2116 2116 HOH HOH A . G 5 HOH 117 2117 2117 HOH HOH A . G 5 HOH 118 2118 2118 HOH HOH A . G 5 HOH 119 2119 2119 HOH HOH A . G 5 HOH 120 2120 2120 HOH HOH A . G 5 HOH 121 2121 2121 HOH HOH A . G 5 HOH 122 2122 2122 HOH HOH A . G 5 HOH 123 2123 2123 HOH HOH A . G 5 HOH 124 2124 2124 HOH HOH A . G 5 HOH 125 2125 2125 HOH HOH A . G 5 HOH 126 2126 2126 HOH HOH A . G 5 HOH 127 2127 2127 HOH HOH A . G 5 HOH 128 2128 2128 HOH HOH A . G 5 HOH 129 2129 2129 HOH HOH A . G 5 HOH 130 2130 2130 HOH HOH A . G 5 HOH 131 2131 2131 HOH HOH A . G 5 HOH 132 2132 2132 HOH HOH A . G 5 HOH 133 2133 2133 HOH HOH A . G 5 HOH 134 2134 2134 HOH HOH A . G 5 HOH 135 2135 2135 HOH HOH A . G 5 HOH 136 2136 2136 HOH HOH A . G 5 HOH 137 2137 2137 HOH HOH A . G 5 HOH 138 2138 2138 HOH HOH A . G 5 HOH 139 2139 2139 HOH HOH A . G 5 HOH 140 2140 2140 HOH HOH A . G 5 HOH 141 2141 2141 HOH HOH A . G 5 HOH 142 2142 2142 HOH HOH A . G 5 HOH 143 2143 2143 HOH HOH A . G 5 HOH 144 2144 2144 HOH HOH A . G 5 HOH 145 2145 2145 HOH HOH A . G 5 HOH 146 2146 2146 HOH HOH A . G 5 HOH 147 2147 2147 HOH HOH A . G 5 HOH 148 2148 2148 HOH HOH A . G 5 HOH 149 2149 2149 HOH HOH A . G 5 HOH 150 2150 2150 HOH HOH A . G 5 HOH 151 2151 2151 HOH HOH A . G 5 HOH 152 2152 2152 HOH HOH A . G 5 HOH 153 2153 2153 HOH HOH A . G 5 HOH 154 2154 2154 HOH HOH A . G 5 HOH 155 2155 2155 HOH HOH A . G 5 HOH 156 2156 2156 HOH HOH A . G 5 HOH 157 2157 2157 HOH HOH A . G 5 HOH 158 2158 2158 HOH HOH A . G 5 HOH 159 2159 2159 HOH HOH A . G 5 HOH 160 2160 2160 HOH HOH A . G 5 HOH 161 2161 2161 HOH HOH A . G 5 HOH 162 2162 2162 HOH HOH A . G 5 HOH 163 2163 2163 HOH HOH A . G 5 HOH 164 2164 2164 HOH HOH A . G 5 HOH 165 2165 2165 HOH HOH A . G 5 HOH 166 2166 2166 HOH HOH A . G 5 HOH 167 2167 2167 HOH HOH A . G 5 HOH 168 2168 2168 HOH HOH A . G 5 HOH 169 2169 2169 HOH HOH A . G 5 HOH 170 2170 2170 HOH HOH A . G 5 HOH 171 2171 2171 HOH HOH A . G 5 HOH 172 2172 2172 HOH HOH A . G 5 HOH 173 2173 2173 HOH HOH A . G 5 HOH 174 2174 2174 HOH HOH A . G 5 HOH 175 2175 2175 HOH HOH A . G 5 HOH 176 2176 2176 HOH HOH A . G 5 HOH 177 2177 2177 HOH HOH A . G 5 HOH 178 2178 2178 HOH HOH A . G 5 HOH 179 2179 2179 HOH HOH A . G 5 HOH 180 2180 2180 HOH HOH A . G 5 HOH 181 2181 2181 HOH HOH A . G 5 HOH 182 2182 2182 HOH HOH A . G 5 HOH 183 2183 2183 HOH HOH A . G 5 HOH 184 2184 2184 HOH HOH A . G 5 HOH 185 2185 2185 HOH HOH A . G 5 HOH 186 2186 2186 HOH HOH A . G 5 HOH 187 2187 2187 HOH HOH A . # loop_ _pdbx_molecule_features.prd_id _pdbx_molecule_features.name _pdbx_molecule_features.type _pdbx_molecule_features.class _pdbx_molecule_features.details PRD_900009 alpha-maltotriose Oligosaccharide Nutrient oligosaccharide PRD_900010 alpha-maltotetraose Oligosaccharide 'Substrate analog' oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900009 B 2 PRD_900010 C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2095 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 54 ? A ASP 60 ? 1_555 ZN ? E ZN . ? A ZN 1225 ? 1_555 ND1 ? A HIS 216 ? A HIS 222 ? 4_444 111.6 ? 2 OD2 ? A ASP 54 ? A ASP 60 ? 1_555 ZN ? E ZN . ? A ZN 1225 ? 1_555 O ? G HOH . ? A HOH 2177 ? 1_555 103.4 ? 3 ND1 ? A HIS 216 ? A HIS 222 ? 4_444 ZN ? E ZN . ? A ZN 1225 ? 1_555 O ? G HOH . ? A HOH 2177 ? 1_555 110.9 ? 4 OD2 ? A ASP 54 ? A ASP 60 ? 1_555 ZN ? E ZN . ? A ZN 1225 ? 1_555 O ? G HOH . ? A HOH 2178 ? 1_555 98.9 ? 5 ND1 ? A HIS 216 ? A HIS 222 ? 4_444 ZN ? E ZN . ? A ZN 1225 ? 1_555 O ? G HOH . ? A HOH 2178 ? 1_555 100.4 ? 6 O ? G HOH . ? A HOH 2177 ? 1_555 ZN ? E ZN . ? A ZN 1225 ? 1_555 O ? G HOH . ? A HOH 2178 ? 1_555 130.8 ? 7 OD1 ? A ASP 147 ? A ASP 153 ? 1_555 ZN ? F ZN . ? A ZN 1226 ? 1_555 O ? G HOH . ? A HOH 2179 ? 1_555 89.0 ? 8 OD2 ? A ASP 192 ? A ASP 198 ? 1_555 ZN ? D ZN . ? A ZN 1224 ? 1_555 NE2 ? A HIS 196 ? A HIS 202 ? 1_555 82.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-11 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' atom_site_anisotrop 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' entity_name_com 6 4 'Structure model' pdbx_branch_scheme 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_database_status 9 4 'Structure model' pdbx_entity_branch 10 4 'Structure model' pdbx_entity_branch_descriptor 11 4 'Structure model' pdbx_entity_branch_link 12 4 'Structure model' pdbx_entity_branch_list 13 4 'Structure model' pdbx_entity_nonpoly 14 4 'Structure model' pdbx_molecule_features 15 4 'Structure model' pdbx_nonpoly_scheme 16 4 'Structure model' pdbx_struct_assembly_gen 17 4 'Structure model' pdbx_struct_conn_angle 18 4 'Structure model' pdbx_struct_special_symmetry 19 4 'Structure model' struct_asym 20 4 'Structure model' struct_conn 21 4 'Structure model' struct_conn_type 22 4 'Structure model' struct_site 23 4 'Structure model' struct_site_gen 24 5 'Structure model' chem_comp 25 5 'Structure model' chem_comp_atom 26 5 'Structure model' chem_comp_bond 27 5 'Structure model' database_2 28 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 4 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 4 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 4 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 4 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 4 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 4 'Structure model' '_atom_site_anisotrop.type_symbol' 28 4 'Structure model' '_chem_comp.name' 29 4 'Structure model' '_chem_comp.type' 30 4 'Structure model' '_pdbx_database_status.status_code_sf' 31 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 35 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 36 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 37 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 38 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 39 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 40 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 41 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 42 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 43 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 44 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 45 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 46 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 47 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 48 4 'Structure model' '_pdbx_struct_conn_angle.value' 49 4 'Structure model' '_struct_conn.conn_type_id' 50 4 'Structure model' '_struct_conn.id' 51 4 'Structure model' '_struct_conn.pdbx_dist_value' 52 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 53 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 54 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 55 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 56 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 57 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 58 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 59 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 60 4 'Structure model' '_struct_conn.ptnr1_symmetry' 61 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 62 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 63 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 64 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 65 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 66 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 67 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 68 4 'Structure model' '_struct_conn.ptnr2_symmetry' 69 4 'Structure model' '_struct_conn_type.id' 70 5 'Structure model' '_chem_comp.pdbx_synonyms' 71 5 'Structure model' '_database_2.pdbx_DOI' 72 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 SPYD phasing . ? 2 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 113 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2105 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.97 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 60 ? ? CG A ASP 60 ? ? OD2 A ASP 60 ? ? 123.80 118.30 5.50 0.90 N 2 1 CB A ASP 126 ? ? CG A ASP 126 ? ? OD2 A ASP 126 ? ? 125.21 118.30 6.91 0.90 N 3 1 CB A ASP 209 ? ? CG A ASP 209 ? ? OD2 A ASP 209 ? ? 123.73 118.30 5.43 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 8 ? ? 79.64 68.47 2 1 ASP A 31 ? ? 66.01 -130.90 3 1 ASP A 32 ? ? -78.96 39.33 4 1 ASN A 39 ? ? 63.95 64.31 5 1 ALA A 79 ? ? -173.46 118.48 6 1 ASN A 128 ? ? 103.75 79.35 7 1 TYR A 129 ? ? 93.96 -64.13 8 1 SER A 145 ? ? -169.44 87.97 9 1 ALA A 146 ? ? 160.96 -119.04 10 1 GLN A 147 ? ? 65.83 86.83 11 1 TRP A 148 ? ? -35.87 135.03 12 1 PRO A 149 ? ? -109.30 59.92 13 1 ASN A 169 ? ? 88.31 154.28 14 1 GLU A 170 ? ? 56.71 -153.47 15 1 ILE A 189 ? ? 53.54 -61.04 16 1 THR A 197 ? ? -91.59 -110.83 17 1 ASP A 198 ? ? 5.35 32.06 18 1 HIS A 202 ? ? -134.97 -88.16 19 1 SER A 203 ? ? 107.51 -33.80 20 1 ASP A 209 ? ? 48.41 -123.73 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASP _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 126 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 127 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 144.63 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLC C1 C N S 74 GLC C2 C N R 75 GLC C3 C N S 76 GLC C4 C N S 77 GLC C5 C N R 78 GLC C6 C N N 79 GLC O1 O N N 80 GLC O2 O N N 81 GLC O3 O N N 82 GLC O4 O N N 83 GLC O5 O N N 84 GLC O6 O N N 85 GLC H1 H N N 86 GLC H2 H N N 87 GLC H3 H N N 88 GLC H4 H N N 89 GLC H5 H N N 90 GLC H61 H N N 91 GLC H62 H N N 92 GLC HO1 H N N 93 GLC HO2 H N N 94 GLC HO3 H N N 95 GLC HO4 H N N 96 GLC HO6 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 ZN ZN ZN N N 401 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLC C1 C2 sing N N 70 GLC C1 O1 sing N N 71 GLC C1 O5 sing N N 72 GLC C1 H1 sing N N 73 GLC C2 C3 sing N N 74 GLC C2 O2 sing N N 75 GLC C2 H2 sing N N 76 GLC C3 C4 sing N N 77 GLC C3 O3 sing N N 78 GLC C3 H3 sing N N 79 GLC C4 C5 sing N N 80 GLC C4 O4 sing N N 81 GLC C4 H4 sing N N 82 GLC C5 C6 sing N N 83 GLC C5 O5 sing N N 84 GLC C5 H5 sing N N 85 GLC C6 O6 sing N N 86 GLC C6 H61 sing N N 87 GLC C6 H62 sing N N 88 GLC O1 HO1 sing N N 89 GLC O2 HO2 sing N N 90 GLC O3 HO3 sing N N 91 GLC O4 HO4 sing N N 92 GLC O6 HO6 sing N N 93 GLN N CA sing N N 94 GLN N H sing N N 95 GLN N H2 sing N N 96 GLN CA C sing N N 97 GLN CA CB sing N N 98 GLN CA HA sing N N 99 GLN C O doub N N 100 GLN C OXT sing N N 101 GLN CB CG sing N N 102 GLN CB HB2 sing N N 103 GLN CB HB3 sing N N 104 GLN CG CD sing N N 105 GLN CG HG2 sing N N 106 GLN CG HG3 sing N N 107 GLN CD OE1 doub N N 108 GLN CD NE2 sing N N 109 GLN NE2 HE21 sing N N 110 GLN NE2 HE22 sing N N 111 GLN OXT HXT sing N N 112 GLU N CA sing N N 113 GLU N H sing N N 114 GLU N H2 sing N N 115 GLU CA C sing N N 116 GLU CA CB sing N N 117 GLU CA HA sing N N 118 GLU C O doub N N 119 GLU C OXT sing N N 120 GLU CB CG sing N N 121 GLU CB HB2 sing N N 122 GLU CB HB3 sing N N 123 GLU CG CD sing N N 124 GLU CG HG2 sing N N 125 GLU CG HG3 sing N N 126 GLU CD OE1 doub N N 127 GLU CD OE2 sing N N 128 GLU OE2 HE2 sing N N 129 GLU OXT HXT sing N N 130 GLY N CA sing N N 131 GLY N H sing N N 132 GLY N H2 sing N N 133 GLY CA C sing N N 134 GLY CA HA2 sing N N 135 GLY CA HA3 sing N N 136 GLY C O doub N N 137 GLY C OXT sing N N 138 GLY OXT HXT sing N N 139 HIS N CA sing N N 140 HIS N H sing N N 141 HIS N H2 sing N N 142 HIS CA C sing N N 143 HIS CA CB sing N N 144 HIS CA HA sing N N 145 HIS C O doub N N 146 HIS C OXT sing N N 147 HIS CB CG sing N N 148 HIS CB HB2 sing N N 149 HIS CB HB3 sing N N 150 HIS CG ND1 sing Y N 151 HIS CG CD2 doub Y N 152 HIS ND1 CE1 doub Y N 153 HIS ND1 HD1 sing N N 154 HIS CD2 NE2 sing Y N 155 HIS CD2 HD2 sing N N 156 HIS CE1 NE2 sing Y N 157 HIS CE1 HE1 sing N N 158 HIS NE2 HE2 sing N N 159 HIS OXT HXT sing N N 160 HOH O H1 sing N N 161 HOH O H2 sing N N 162 ILE N CA sing N N 163 ILE N H sing N N 164 ILE N H2 sing N N 165 ILE CA C sing N N 166 ILE CA CB sing N N 167 ILE CA HA sing N N 168 ILE C O doub N N 169 ILE C OXT sing N N 170 ILE CB CG1 sing N N 171 ILE CB CG2 sing N N 172 ILE CB HB sing N N 173 ILE CG1 CD1 sing N N 174 ILE CG1 HG12 sing N N 175 ILE CG1 HG13 sing N N 176 ILE CG2 HG21 sing N N 177 ILE CG2 HG22 sing N N 178 ILE CG2 HG23 sing N N 179 ILE CD1 HD11 sing N N 180 ILE CD1 HD12 sing N N 181 ILE CD1 HD13 sing N N 182 ILE OXT HXT sing N N 183 LEU N CA sing N N 184 LEU N H sing N N 185 LEU N H2 sing N N 186 LEU CA C sing N N 187 LEU CA CB sing N N 188 LEU CA HA sing N N 189 LEU C O doub N N 190 LEU C OXT sing N N 191 LEU CB CG sing N N 192 LEU CB HB2 sing N N 193 LEU CB HB3 sing N N 194 LEU CG CD1 sing N N 195 LEU CG CD2 sing N N 196 LEU CG HG sing N N 197 LEU CD1 HD11 sing N N 198 LEU CD1 HD12 sing N N 199 LEU CD1 HD13 sing N N 200 LEU CD2 HD21 sing N N 201 LEU CD2 HD22 sing N N 202 LEU CD2 HD23 sing N N 203 LEU OXT HXT sing N N 204 LYS N CA sing N N 205 LYS N H sing N N 206 LYS N H2 sing N N 207 LYS CA C sing N N 208 LYS CA CB sing N N 209 LYS CA HA sing N N 210 LYS C O doub N N 211 LYS C OXT sing N N 212 LYS CB CG sing N N 213 LYS CB HB2 sing N N 214 LYS CB HB3 sing N N 215 LYS CG CD sing N N 216 LYS CG HG2 sing N N 217 LYS CG HG3 sing N N 218 LYS CD CE sing N N 219 LYS CD HD2 sing N N 220 LYS CD HD3 sing N N 221 LYS CE NZ sing N N 222 LYS CE HE2 sing N N 223 LYS CE HE3 sing N N 224 LYS NZ HZ1 sing N N 225 LYS NZ HZ2 sing N N 226 LYS NZ HZ3 sing N N 227 LYS OXT HXT sing N N 228 MET N CA sing N N 229 MET N H sing N N 230 MET N H2 sing N N 231 MET CA C sing N N 232 MET CA CB sing N N 233 MET CA HA sing N N 234 MET C O doub N N 235 MET C OXT sing N N 236 MET CB CG sing N N 237 MET CB HB2 sing N N 238 MET CB HB3 sing N N 239 MET CG SD sing N N 240 MET CG HG2 sing N N 241 MET CG HG3 sing N N 242 MET SD CE sing N N 243 MET CE HE1 sing N N 244 MET CE HE2 sing N N 245 MET CE HE3 sing N N 246 MET OXT HXT sing N N 247 PHE N CA sing N N 248 PHE N H sing N N 249 PHE N H2 sing N N 250 PHE CA C sing N N 251 PHE CA CB sing N N 252 PHE CA HA sing N N 253 PHE C O doub N N 254 PHE C OXT sing N N 255 PHE CB CG sing N N 256 PHE CB HB2 sing N N 257 PHE CB HB3 sing N N 258 PHE CG CD1 doub Y N 259 PHE CG CD2 sing Y N 260 PHE CD1 CE1 sing Y N 261 PHE CD1 HD1 sing N N 262 PHE CD2 CE2 doub Y N 263 PHE CD2 HD2 sing N N 264 PHE CE1 CZ doub Y N 265 PHE CE1 HE1 sing N N 266 PHE CE2 CZ sing Y N 267 PHE CE2 HE2 sing N N 268 PHE CZ HZ sing N N 269 PHE OXT HXT sing N N 270 PRO N CA sing N N 271 PRO N CD sing N N 272 PRO N H sing N N 273 PRO CA C sing N N 274 PRO CA CB sing N N 275 PRO CA HA sing N N 276 PRO C O doub N N 277 PRO C OXT sing N N 278 PRO CB CG sing N N 279 PRO CB HB2 sing N N 280 PRO CB HB3 sing N N 281 PRO CG CD sing N N 282 PRO CG HG2 sing N N 283 PRO CG HG3 sing N N 284 PRO CD HD2 sing N N 285 PRO CD HD3 sing N N 286 PRO OXT HXT sing N N 287 SER N CA sing N N 288 SER N H sing N N 289 SER N H2 sing N N 290 SER CA C sing N N 291 SER CA CB sing N N 292 SER CA HA sing N N 293 SER C O doub N N 294 SER C OXT sing N N 295 SER CB OG sing N N 296 SER CB HB2 sing N N 297 SER CB HB3 sing N N 298 SER OG HG sing N N 299 SER OXT HXT sing N N 300 THR N CA sing N N 301 THR N H sing N N 302 THR N H2 sing N N 303 THR CA C sing N N 304 THR CA CB sing N N 305 THR CA HA sing N N 306 THR C O doub N N 307 THR C OXT sing N N 308 THR CB OG1 sing N N 309 THR CB CG2 sing N N 310 THR CB HB sing N N 311 THR OG1 HG1 sing N N 312 THR CG2 HG21 sing N N 313 THR CG2 HG22 sing N N 314 THR CG2 HG23 sing N N 315 THR OXT HXT sing N N 316 TRP N CA sing N N 317 TRP N H sing N N 318 TRP N H2 sing N N 319 TRP CA C sing N N 320 TRP CA CB sing N N 321 TRP CA HA sing N N 322 TRP C O doub N N 323 TRP C OXT sing N N 324 TRP CB CG sing N N 325 TRP CB HB2 sing N N 326 TRP CB HB3 sing N N 327 TRP CG CD1 doub Y N 328 TRP CG CD2 sing Y N 329 TRP CD1 NE1 sing Y N 330 TRP CD1 HD1 sing N N 331 TRP CD2 CE2 doub Y N 332 TRP CD2 CE3 sing Y N 333 TRP NE1 CE2 sing Y N 334 TRP NE1 HE1 sing N N 335 TRP CE2 CZ2 sing Y N 336 TRP CE3 CZ3 doub Y N 337 TRP CE3 HE3 sing N N 338 TRP CZ2 CH2 doub Y N 339 TRP CZ2 HZ2 sing N N 340 TRP CZ3 CH2 sing Y N 341 TRP CZ3 HZ3 sing N N 342 TRP CH2 HH2 sing N N 343 TRP OXT HXT sing N N 344 TYR N CA sing N N 345 TYR N H sing N N 346 TYR N H2 sing N N 347 TYR CA C sing N N 348 TYR CA CB sing N N 349 TYR CA HA sing N N 350 TYR C O doub N N 351 TYR C OXT sing N N 352 TYR CB CG sing N N 353 TYR CB HB2 sing N N 354 TYR CB HB3 sing N N 355 TYR CG CD1 doub Y N 356 TYR CG CD2 sing Y N 357 TYR CD1 CE1 sing Y N 358 TYR CD1 HD1 sing N N 359 TYR CD2 CE2 doub Y N 360 TYR CD2 HD2 sing N N 361 TYR CE1 CZ doub Y N 362 TYR CE1 HE1 sing N N 363 TYR CE2 CZ sing Y N 364 TYR CE2 HE2 sing N N 365 TYR CZ OH sing N N 366 TYR OH HH sing N N 367 TYR OXT HXT sing N N 368 VAL N CA sing N N 369 VAL N H sing N N 370 VAL N H2 sing N N 371 VAL CA C sing N N 372 VAL CA CB sing N N 373 VAL CA HA sing N N 374 VAL C O doub N N 375 VAL C OXT sing N N 376 VAL CB CG1 sing N N 377 VAL CB CG2 sing N N 378 VAL CB HB sing N N 379 VAL CG1 HG11 sing N N 380 VAL CG1 HG12 sing N N 381 VAL CG1 HG13 sing N N 382 VAL CG2 HG21 sing N N 383 VAL CG2 HG22 sing N N 384 VAL CG2 HG23 sing N N 385 VAL OXT HXT sing N N 386 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 A GLC 1232 n B 2 GLC 2 B GLC 2 A GLC 1227 n B 2 GLC 3 B GLC 3 A GLC 1228 n C 3 GLC 1 C GLC 1 A GLC 1233 n C 3 GLC 2 C GLC 2 A GLC 1229 n C 3 GLC 3 C GLC 3 A GLC 1230 n C 3 GLC 4 C GLC 4 A GLC 1231 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpa1-4DGlcpa1-4DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,3,2/[a2122h-1a_1-5]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Glcp]{[(4+1)][a-D-Glcp]{[(4+1)][a-D-Glcp]{}}}' LINUCS PDB-CARE ? 4 3 DGlcpa1-4DGlcpa1-4DGlcpa1-4DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,4,3/[a2122h-1a_1-5]/1-1-1-1/a4-b1_b4-c1_c4-d1' WURCS PDB2Glycan 1.1.0 6 3 '[][a-D-Glcp]{[(4+1)][a-D-Glcp]{[(4+1)][a-D-Glcp]{[(4+1)][a-D-Glcp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GLC C1 O1 1 GLC O4 HO4 sing ? 2 2 3 GLC C1 O1 2 GLC O4 HO4 sing ? 3 3 2 GLC C1 O1 1 GLC O4 HO4 sing ? 4 3 3 GLC C1 O1 2 GLC O4 HO4 sing ? 5 3 4 GLC C1 O1 3 GLC O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 GLC 2 n 2 GLC 3 n 3 GLC 1 n 3 GLC 2 n 3 GLC 3 n 3 GLC 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2J43 _pdbx_initial_refinement_model.details 'PDB ENTRY 2J43' #